Miyakogusa Predicted Gene
- Lj2g3v1968220.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1968220.1 tr|G7K3T3|G7K3T3_MEDTR Cyclin-D5-1 OS=Medicago
truncatula GN=MTR_5g015670 PE=3 SV=1,69.35,0,CYCLIN-D,NULL;
CYCLINE,NULL; Cyclin_N,Cyclin, N-terminal; domain present in cyclins,
TFIIB and Retin,CUFF.38107.1
(328 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g015670.1 | carboxy-terminal domain cyclin | HC | chr5:546... 366 e-101
Medtr3g103080.1 | carboxy-terminal domain cyclin | HC | chr3:474... 180 1e-45
Medtr4g095790.1 | amine-terminal domain cyclin | HC | chr4:39947... 179 3e-45
Medtr8g063120.1 | carboxy-terminal domain cyclin | HC | chr8:264... 134 1e-31
Medtr8g063120.2 | carboxy-terminal domain cyclin | HC | chr8:264... 132 6e-31
Medtr4g080990.1 | carboxy-terminal domain cyclin | HC | chr4:312... 129 4e-30
Medtr5g035360.1 | carboxy-terminal domain cyclin | HC | chr5:153... 127 2e-29
Medtr3g100710.1 | carboxy-terminal domain cyclin | HC | chr3:463... 119 3e-27
Medtr5g032550.1 | carboxy-terminal domain cyclin | HC | chr5:139... 112 4e-25
Medtr4g094942.1 | carboxy-terminal domain cyclin | HC | chr4:393... 112 5e-25
Medtr5g032550.2 | carboxy-terminal domain cyclin | HC | chr5:139... 110 2e-24
Medtr3g102310.1 | carboxy-terminal domain cyclin | HC | chr3:471... 110 2e-24
Medtr1g107535.1 | carboxy-terminal domain cyclin | HC | chr1:488... 109 3e-24
Medtr5g065830.1 | carboxy-terminal domain cyclin | LC | chr5:277... 105 5e-23
Medtr2g089490.1 | carboxy-terminal domain cyclin | HC | chr2:378... 100 1e-21
Medtr2g011500.1 | carboxy-terminal domain cyclin | HC | chr2:280... 100 2e-21
Medtr2g089490.2 | carboxy-terminal domain cyclin | HC | chr2:378... 97 3e-20
Medtr8g068950.1 | carboxy-terminal domain cyclin | LC | chr8:288... 89 6e-18
Medtr3g100710.2 | carboxy-terminal domain cyclin | HC | chr3:463... 84 3e-16
Medtr8g074000.1 | carboxy-terminal domain cyclin | HC | chr8:312... 62 9e-10
Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731 60 4e-09
Medtr5g088980.1 | carboxy-terminal domain cyclin | HC | chr5:386... 60 4e-09
Medtr3g102530.1 | carboxy-terminal domain cyclin | HC | chr3:472... 60 4e-09
Medtr3g060770.1 | carboxy-terminal domain cyclin | LC | chr3:241... 59 6e-09
Medtr3g102510.1 | carboxy-terminal domain cyclin | HC | chr3:472... 59 9e-09
Medtr3g102520.1 | carboxy-terminal domain cyclin | HC | chr3:472... 55 8e-08
Medtr3g088415.3 | carboxy-terminal domain cyclin | HC | chr3:401... 55 1e-07
Medtr3g088405.1 | carboxy-terminal domain cyclin | HC | chr3:401... 55 1e-07
Medtr5g023790.2 | carboxy-terminal domain cyclin | HC | chr5:947... 55 1e-07
Medtr5g023790.3 | carboxy-terminal domain cyclin | HC | chr5:947... 55 1e-07
Medtr3g060410.1 | carboxy-terminal domain cyclin | LC | chr3:236... 55 1e-07
Medtr3g088415.2 | carboxy-terminal domain cyclin | HC | chr3:401... 55 1e-07
Medtr5g023790.1 | carboxy-terminal domain cyclin | HC | chr5:947... 55 1e-07
Medtr3g088415.1 | carboxy-terminal domain cyclin | HC | chr3:401... 54 1e-07
Medtr1g011470.1 | carboxy-terminal domain cyclin | HC | chr1:203... 54 2e-07
Medtr1g018680.1 | carboxy-terminal domain cyclin | HC | chr1:543... 54 2e-07
Medtr3g107970.1 | carboxy-terminal domain cyclin | HC | chr3:498... 53 4e-07
Medtr3g060820.1 | carboxy-terminal domain cyclin | LC | chr3:241... 53 4e-07
Medtr3g061680.1 | carboxy-terminal domain cyclin | LC | chr3:246... 52 6e-07
Medtr3g460990.1 | carboxy-terminal domain cyclin | LC | chr3:240... 52 8e-07
Medtr3g060400.1 | carboxy-terminal domain cyclin | LC | chr3:236... 52 8e-07
Medtr2g102550.1 | carboxy-terminal domain cyclin | HC | chr2:441... 51 2e-06
Medtr2g102520.1 | carboxy-terminal domain cyclin | HC | chr2:441... 49 1e-05
>Medtr5g015670.1 | carboxy-terminal domain cyclin | HC |
chr5:5464504-5462357 | 20130731
Length = 353
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/278 (68%), Positives = 211/278 (75%), Gaps = 15/278 (5%)
Query: 53 LFRQETGLGIGSQIHFL---------SCDDDHSERCWMMSARLDAIDWIFNTQARFGFCV 103
LF+QETGLG GS HFL DD W+ +ARL AIDWIFNTQA+FGF V
Sbjct: 62 LFKQETGLGFGSITHFLCYDDHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFTV 121
Query: 104 QTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQRVPPLSEYPIQGYCFE 163
QTAYLS+ YFDRFLSKRSIDESKPWAIQLLSVACLS+AAKMEEQ VPPLSEYPI+ Y FE
Sbjct: 122 QTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIE-YRFE 180
Query: 164 NKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKFFPGSRPETIITKATEHIVTMVRDVN 223
NKVIKNMELLILSTLEW+MGL TPFAYLHYF +KF GSR ETIITKAT+HIVTMV+D N
Sbjct: 181 NKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCNGSRSETIITKATQHIVTMVKDFN 240
Query: 224 LMDQRPXXXXXXXXXXXFDATLTKKAIDLRISLISSWGNIESEHVFSCYNLIQEKTRDKV 283
LM+QRP FD+TLTKK IDLRISL+SS GN+ESEHVFSCYN+IQEK RDKV
Sbjct: 241 LMNQRPSTIASASILAAFDSTLTKKEIDLRISLVSSCGNLESEHVFSCYNVIQEKIRDKV 300
Query: 284 -KTPXXXXXXXXX----CVLENQSNTSTGIKRKLCYED 316
KTP V+EN+ N G+KRKL YE+
Sbjct: 301 NKTPSSDLLSTESNSTCVVVENKFNACVGVKRKLSYEE 338
>Medtr3g103080.1 | carboxy-terminal domain cyclin | HC |
chr3:47495355-47493059 | 20130731
Length = 320
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 130/203 (64%), Gaps = 3/203 (1%)
Query: 84 ARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAK 143
ARL+AI+WI + F +TAYLSVTY DRFLSK ID K WA++LLS+ACLSLAAK
Sbjct: 66 ARLNAINWILKKREALDFHFETAYLSVTYLDRFLSKHFIDGEKDWAMRLLSIACLSLAAK 125
Query: 144 MEEQRVPPLSEYPIQ-GYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKFFPGS 202
MEE VP LS++ ++ Y FE KVI+ MEL +LS+L+W MG+ TPF++L YF+ K F
Sbjct: 126 MEECNVPELSQFQLEDDYVFEGKVIQKMELFVLSSLDWNMGIITPFSFLSYFIKK-FSNE 184
Query: 203 RPETIITKATEHIVTMV-RDVNLMDQRPXXXXXXXXXXXFDATLTKKAIDLRISLISSWG 261
P II+ I T+V + NLMD +P FD LT + + L+++ IS
Sbjct: 185 SPSPIISNTMHPIFTVVMEEFNLMDHKPSVVAAAATLVAFDQKLTIEDVRLKMNSISQHP 244
Query: 262 NIESEHVFSCYNLIQEKTRDKVK 284
++ + VF+CY+LIQ +K+K
Sbjct: 245 LLQPDDVFACYSLIQRLYEEKIK 267
>Medtr4g095790.1 | amine-terminal domain cyclin | HC |
chr4:39947133-39948589 | 20130731
Length = 320
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 149/246 (60%), Gaps = 11/246 (4%)
Query: 85 RLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKM 144
R++AID IFNT+ + GF + TAYLSVTYFD+FL K+ I + IQLL ACLSLAAKM
Sbjct: 68 RVNAIDHIFNTREKLGFKLCTAYLSVTYFDQFLLKQHIHIHEDRPIQLLYAACLSLAAKM 127
Query: 145 EEQR-----VPPLSEYPIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKFF 199
E+R + ++E +G + I+ ME+ + STLEW + TPF +LHYFV F
Sbjct: 128 TEERDLSLLLKCITEIDQEGGFIVKQCIRQMEVEVFSTLEWELTTVTPFDFLHYFVYLFC 187
Query: 200 PGSRPETIITKATEHIVTMVRDVNLMDQRPXX-XXXXXXXXXFDATLTKKAIDLRISLIS 258
P S E +I++A EH++ +++DVNLMD RP FDATLT++ +DL I I
Sbjct: 188 PESSSEPLISQAVEHVLDILKDVNLMDLRPSVIALAATLMVTFDATLTREIMDLHIGDIL 247
Query: 259 SWGNIESEHVFSCYNLIQEKTRDKVKTPXXXXXXXX----XCVLENQSNTSTGIKRKLCY 314
N+++E VF CY+L++EK+++K K VL++ ++S +RK +
Sbjct: 248 LQLNLDTEGVFYCYHLMKEKSKEKGKLNTSVSTLTSQWSYTSVLDHSVSSSIA-RRKFGF 306
Query: 315 EDSENC 320
++ ENC
Sbjct: 307 DNKENC 312
>Medtr8g063120.1 | carboxy-terminal domain cyclin | HC |
chr8:26438234-26434719 | 20130731
Length = 355
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 110/199 (55%), Gaps = 6/199 (3%)
Query: 83 SARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAA 142
S R +AI WI +GF TAYLSV Y DRFL R + ES W +QLLSVACLSLAA
Sbjct: 92 STREEAIAWILKVHEYYGFQPLTAYLSVNYMDRFLDSRPLPESNGWPLQLLSVACLSLAA 151
Query: 143 KMEEQRVPPLSEYPIQG--YCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKF-F 199
KMEE VP L ++ I+G Y F+ + I MELL+L+ L+WR+ TP ++L +F K
Sbjct: 152 KMEEPLVPSLLDFQIEGAKYIFQPRTILRMELLVLTILDWRLRSITPLSFLSFFACKLDS 211
Query: 200 PGSRPETIITKATEHIVTMVRDVNLMDQRPXXXXXXXXXXXFDATLTKKAIDLRISLISS 259
G+ II++ATE I++ ++D + + RP + ++ + S
Sbjct: 212 TGTFTHFIISRATEIILSNIQDASFLTYRPSCIAAAAILSAANEIPNWSFVNPEHA--ES 269
Query: 260 W-GNIESEHVFSCYNLIQE 277
W + E + CY LIQE
Sbjct: 270 WCEGLSKEKIIGCYELIQE 288
>Medtr8g063120.2 | carboxy-terminal domain cyclin | HC |
chr8:26438234-26434719 | 20130731
Length = 283
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 95/150 (63%), Gaps = 3/150 (2%)
Query: 83 SARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAA 142
S R +AI WI +GF TAYLSV Y DRFL R + ES W +QLLSVACLSLAA
Sbjct: 92 STREEAIAWILKVHEYYGFQPLTAYLSVNYMDRFLDSRPLPESNGWPLQLLSVACLSLAA 151
Query: 143 KMEEQRVPPLSEYPIQG--YCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKF-F 199
KMEE VP L ++ I+G Y F+ + I MELL+L+ L+WR+ TP ++L +F K
Sbjct: 152 KMEEPLVPSLLDFQIEGAKYIFQPRTILRMELLVLTILDWRLRSITPLSFLSFFACKLDS 211
Query: 200 PGSRPETIITKATEHIVTMVRDVNLMDQRP 229
G+ II++ATE I++ ++D + + RP
Sbjct: 212 TGTFTHFIISRATEIILSNIQDASFLTYRP 241
>Medtr4g080990.1 | carboxy-terminal domain cyclin | HC |
chr4:31294716-31295744 | 20130731
Length = 342
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 111/199 (55%), Gaps = 7/199 (3%)
Query: 83 SARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAA 142
AR +AIDWI Q+ FGF YLS+ Y DRFLS E + W++QLL+VACLSLAA
Sbjct: 90 GARNEAIDWIQKVQSHFGFGPLCVYLSINYMDRFLSAYQFPERRDWSMQLLAVACLSLAA 149
Query: 143 KMEEQRVPPLSEYPI--QGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKFF- 199
K++E VP + E I + FE K I+ +ELL+L+TL+WRM TPF+++ YF+SK
Sbjct: 150 KVDETDVPRILELQIGESKFVFEAKTIQKIELLVLTTLKWRMQAITPFSFIEYFLSKIND 209
Query: 200 -PGSRPETIITKATEHIVTMVRDVNLMDQRPXXXXXXXXXXXFDATLTKKAIDLRISLIS 258
S +II + T+ I + ++ + ++ +P + +AID S+ +
Sbjct: 210 DKSSLNNSIILQCTQLISSTIKSPDFLEFKPSEIAAAVATYVVEEF---QAIDSSKSIST 266
Query: 259 SWGNIESEHVFSCYNLIQE 277
IE E + C +QE
Sbjct: 267 LIQYIEKERLLKCVEKVQE 285
>Medtr5g035360.1 | carboxy-terminal domain cyclin | HC |
chr5:15376779-15381259 | 20130731
Length = 334
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 116/213 (54%), Gaps = 28/213 (13%)
Query: 84 ARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAK 143
AR ++I WI Q +GF TAYL+V Y DRFL+ R + ++ W +QLLSVACLSLAAK
Sbjct: 76 ARDESIRWILKVQGYYGFQPVTAYLAVNYMDRFLNSRRLPQTNGWPLQLLSVACLSLAAK 135
Query: 144 MEEQRVPPLSEYPIQG--YCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKFFPG 201
MEE VP L + ++G Y FE I+ MELL+LS L+WR+ TPF++L +F K
Sbjct: 136 MEETLVPSLLDLQVEGVKYMFEPITIRRMELLVLSVLDWRLRSVTPFSFLSFFACKLDST 195
Query: 202 SR-PETIITKATEHIVTMVRDVNLMDQRPXXXXXXXXXXXFDATLTKKAIDLRISLISSW 260
S +I++AT+ I++ +++ +++ P + + AI + I +W
Sbjct: 196 STFTGFLISRATQIILSKIQEASILAYWP-------------SCIAAAAILYAANEIPNW 242
Query: 261 GNIESEH------------VFSCYNLIQEKTRD 281
+E EH + CY L+QE D
Sbjct: 243 SLVEPEHAESWCEGLRKEKIIGCYQLMQELVID 275
>Medtr3g100710.1 | carboxy-terminal domain cyclin | HC |
chr3:46343463-46340451 | 20130731
Length = 362
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 84 ARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAK 143
AR + IDWI +A FGF AYLS+ Y DRFLS + + W +QLL+VACLSLAAK
Sbjct: 96 ARNEVIDWIQKVRAHFGFGPLCAYLSINYMDRFLSVYEFPKGRAWTMQLLAVACLSLAAK 155
Query: 144 MEEQRVP-PLS-EYPIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKFFPG 201
+EE VP PL + + FE K I+ MELL+LSTL+WRM TPF+++ F+SK
Sbjct: 156 VEETAVPQPLDLQIGESKFVFEAKTIQRMELLVLSTLKWRMQAITPFSFIECFLSKIKDD 215
Query: 202 SR--PETIITKATEHIVTMVRDVNLMDQRPXXXXXXXXXXXFDATLTKKAIDLRISLISS 259
+ + I+++T+ I + ++ ++ ++ +P T +AID S+ +
Sbjct: 216 DKSSLSSSISRSTQLISSTIKGLDFLEFKPSEIAAAVATCVVGET---QAIDSSKSISTL 272
Query: 260 WGNIESEHVFSCYNLIQEKTRDKVKT 285
+E + C +QE + + V T
Sbjct: 273 IQYVEKGRLLKCVGKVQEMSLNSVFT 298
>Medtr5g032550.1 | carboxy-terminal domain cyclin | HC |
chr5:13982616-13985265 | 20130731
Length = 346
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 111/205 (54%), Gaps = 8/205 (3%)
Query: 82 MSARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLA 141
+S R +A+DWI+ A +GF + LSV Y DRFLS W +QLL+VAC SLA
Sbjct: 89 LSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLA 148
Query: 142 AKMEEQRVPPLSEYPIQ--GYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKFF 199
AKMEE +VP + + + F+ K I+ MEL+ILS+L W+M TP +++ YF++K
Sbjct: 149 AKMEEVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKIS 208
Query: 200 PGSRPE-TIITKATEHIVTMVRDVNLMDQRPXXXXXXXXXXXFDATLTKKAIDLRISLIS 258
P+ ++I ++ + I+ +++ ++ ++ R L + +D I+
Sbjct: 209 CEKYPDKSLIARSVQLILNIIKGIDFLEFRSSEIAAAVAISL--KELPTQEVD---KAIT 263
Query: 259 SWGNIESEHVFSCYNLIQEKTRDKV 283
+ ++ E V C LI++ + KV
Sbjct: 264 DFFIVDKERVLKCVELIRDLSLIKV 288
>Medtr4g094942.1 | carboxy-terminal domain cyclin | HC |
chr4:39336584-39338672 | 20130731
Length = 359
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 77/122 (63%), Gaps = 2/122 (1%)
Query: 84 ARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAK 143
+R++ ++W+ A +GF T L+V YFDRF++ + KPW QL +VACLSLAAK
Sbjct: 81 SRVEGVNWVSRVCAHYGFSTLTTVLAVNYFDRFVTSLKFQKDKPWMTQLTAVACLSLAAK 140
Query: 144 MEEQRVPPLSEYPIQG--YCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKFFPG 201
MEE VP L ++ ++ + FE K I+ MELL+LSTL+WRM TP ++ + V +
Sbjct: 141 MEETHVPLLLDFQVEESRFVFEAKTIQRMELLVLSTLKWRMLPVTPISFFEHIVRRLGLK 200
Query: 202 SR 203
SR
Sbjct: 201 SR 202
>Medtr5g032550.2 | carboxy-terminal domain cyclin | HC |
chr5:13982619-13985265 | 20130731
Length = 272
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 92/150 (61%), Gaps = 3/150 (2%)
Query: 82 MSARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLA 141
+S R +A+DWI+ A +GF + LSV Y DRFLS W +QLL+VAC SLA
Sbjct: 89 LSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLA 148
Query: 142 AKMEEQRVPPLSEYPIQ--GYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKFF 199
AKMEE +VP + + + F+ K I+ MEL+ILS+L W+M TP +++ YF++K
Sbjct: 149 AKMEEVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKIS 208
Query: 200 PGSRPE-TIITKATEHIVTMVRDVNLMDQR 228
P+ ++I ++ + I+ +++ ++ ++ R
Sbjct: 209 CEKYPDKSLIARSVQLILNIIKGIDFLEFR 238
>Medtr3g102310.1 | carboxy-terminal domain cyclin | HC |
chr3:47150613-47152390 | 20130731
Length = 348
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Query: 83 SARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAA 142
+AR ++I+WI A + F T+ L+V Y DRFL KPW QL +VACLSLAA
Sbjct: 83 TARRESIEWILKVNAHYSFSALTSVLAVNYLDRFLFSFRFQNEKPWMTQLAAVACLSLAA 142
Query: 143 KMEEQRVPPLSEYPIQG--YCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKF 198
KMEE VP L + ++ Y FE K IK ME+LILSTL W+M ATP +++ + + +
Sbjct: 143 KMEETHVPLLLDLQVEESRYLFEAKTIKKMEILILSTLGWKMNPATPLSFIDFIIRRL 200
>Medtr1g107535.1 | carboxy-terminal domain cyclin | HC |
chr1:48851792-48849419 | 20130731
Length = 384
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Query: 85 RLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKM 144
R +A++W+ A +GF TA L+V Y DRFL + KPW IQL++V C+SLAAK+
Sbjct: 107 RREAVEWMLKVNAHYGFSALTATLAVNYLDRFLLSFHFQKEKPWMIQLVAVTCISLAAKV 166
Query: 145 EEQRVPPLSEYPIQG--YCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKF 198
EE +VP L + +Q Y FE K I+ MELLILSTL+W+M T ++L + + +
Sbjct: 167 EETQVPLLLDLQVQDTKYVFEAKTIQRMELLILSTLKWKMHPVTTHSFLDHIIRRL 222
>Medtr5g065830.1 | carboxy-terminal domain cyclin | LC |
chr5:27701765-27698581 | 20130731
Length = 352
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 82 MSARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLA 141
+ R+++IDW+ FGF YL++ Y DRFLS + + + W+IQLL+ CL LA
Sbjct: 85 LQGRMESIDWMEKAGLYFGFGPLCIYLAIRYMDRFLSVVDMLKERKWSIQLLAFCCLYLA 144
Query: 142 AKMEEQRVPPLSEYPI--QGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKFF 199
AK++E VP + + + Y F+ K ++ ELLILSTL WRM TPF+Y+ +F++K
Sbjct: 145 AKIDEVVVPRSVDMQMDEKKYLFDKKTLRTTELLILSTLNWRMQAITPFSYIDFFLNKVN 204
Query: 200 PGSRP-ETIITKATEHIVTMVRDVNLMDQRPXXXXXXXXXXXFDA-----TLTKKAIDLR 253
P I ++ I++ VR ++ + RP T+KA+ L
Sbjct: 205 GDQVPIGDSILQSFRLIMSTVRGLDFIQFRPSEIAAAVAVLVSVEGENLIVQTEKALSLL 264
Query: 254 ISLISSWGNIESEHVFSCYNLIQE 277
I +E E V C +IQ+
Sbjct: 265 IEY------VEKEKVMKCIEMIQQ 282
>Medtr2g089490.1 | carboxy-terminal domain cyclin | HC |
chr2:37834166-37831665 | 20130731
Length = 302
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 83 SARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAA 142
S R D I I +Q F YL++ Y DRFL+ + I + KPWA +LL+V C SLA
Sbjct: 49 SVRTDFISLI--SQLSCNFDPFVTYLAINYLDRFLANQGILQPKPWANKLLAVTCFSLAV 106
Query: 143 KMEEQR-----VPPLSEYPIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSK 197
KM + V L + G+ FE + IK ME L+L L+WRM TPF+++ YF +
Sbjct: 107 KMLKTEYSATDVQALMNHGDGGFIFETQTIKRMEALVLGALQWRMRSITPFSFIPYFTNL 166
Query: 198 FFPGSRPETIIT-KATEHIVTMVRDVNLMDQRPXXXXXXXXXXXFDATLTKKAIDLRISL 256
F ++ +A+E I+ +DV +M+ +P L + +
Sbjct: 167 FMLDDITLKVLKDRASEIILKSQKDVKVMEFKPSIVAASSLLYS-SHELFPFQYPCFLGI 225
Query: 257 ISSWGNIESEHVFSCYNLIQEKTRDKVKT 285
IS+ + E V CYN+IQ+ +++ ++
Sbjct: 226 ISNCSYVNKESVMECYNVIQDIAKEEYES 254
>Medtr2g011500.1 | carboxy-terminal domain cyclin | HC |
chr2:2803180-2800861 | 20130731
Length = 306
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 7/219 (3%)
Query: 68 FLSCDDDH--SERCWMMSARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDES 125
+ + DH S C + S +AI I Q AYL++ Y RF+SK+ +
Sbjct: 66 LFASETDHMPSPNC-LNSIHCEAISLILQVQHSCNLDPFIAYLAINYLHRFMSKQEFPQG 124
Query: 126 KPWAIQLLSVACLSLAAKMEEQRVPPLSEYPIQGYCFENKVIKNMELLILSTLEWRMGLA 185
KPW I+L+ ++CLSLA+KM+ + P S+ +G F + I+ MEL+IL L+WRM
Sbjct: 125 KPWLIRLIVISCLSLASKMKNTHL-PFSKLQKEGCNFNGETIQKMELVILGALDWRMRSI 183
Query: 186 TPFAYLHYFVSKFFPGSRPETIITKATEHIVTMVRDVNLMDQRPXXXXXXXXXXXFDATL 245
TPF +L++F+S + ++ +A E I + D+ ++ +P
Sbjct: 184 TPFPFLNFFIS--LAQIKDRSLKDRAAEIIFNVHNDIKFLEYKPSTVAAASLIYASYELF 241
Query: 246 TKKAIDLRISLISSWGNIESEHVFSCYNLIQEKTRDKVK 284
++ LR ++ +S I+ + + C +++Q+ R++VK
Sbjct: 242 PQQYYILRATITTS-EYIDQDTLAKCIDMMQDIWRNEVK 279
>Medtr2g089490.2 | carboxy-terminal domain cyclin | HC |
chr2:37834166-37831680 | 20130731
Length = 299
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 83 SARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAA 142
S R D I I +Q F YL++ Y DRFL+ + I + KPWA +LL+V C SLA
Sbjct: 49 SVRTDFISLI--SQLSCNFDPFVTYLAINYLDRFLANQGILQPKPWANKLLAVTCFSLAV 106
Query: 143 KMEEQR-----VPPLSEYPIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSK 197
KM + V L + G+ FE + IK ME L+L L+WRM TPF+++ YF +
Sbjct: 107 KMLKTEYSATDVQALMNHGDGGFIFETQTIKRMEALVLGALQWRMRSITPFSFIPYFTNL 166
Query: 198 FFPGSRPETIIT-KATEHIVTMVRDVNLMDQRPXXXXXXXXXXXFDATLTKKAIDLRISL 256
F ++ +A+E I+ +DV +M+ +P L + +
Sbjct: 167 FMLDDITLKVLKDRASEIILKSQKDVKVMEFKPSIVAASSLLYS-SHELFPFQYPCFLGI 225
Query: 257 ISSWGNIESEHVFSCYNLIQEKTRDKVKT 285
IS N E V CYN+IQ+ +++ ++
Sbjct: 226 IS---NCSYESVMECYNVIQDIAKEEYES 251
>Medtr8g068950.1 | carboxy-terminal domain cyclin | LC |
chr8:28849604-28851600 | 20130731
Length = 374
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 88/153 (57%), Gaps = 11/153 (7%)
Query: 85 RLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKM 144
R +AI+W++ A +GF L+V Y DRFLS + W+ +LL++ACLS+AAK+
Sbjct: 108 RREAIEWMWKAAACYGFGPCIFSLAVNYVDRFLSVYKFERGHLWSEKLLALACLSIAAKL 167
Query: 145 EE-QRVPPLSEYPIQG--YCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKF--- 198
EE +++P ++ + + FE K I MELLIL L W M +TP +++ YF+SK
Sbjct: 168 EEGKKLPKSIDFKLGELVFVFETKGITTMELLILDHLNWEMQSSTPCSFVDYFLSKITSE 227
Query: 199 --FPGSRPETIITKATEHIVTMVRDVNLMDQRP 229
FP + + + + I+ M + ++ ++ +P
Sbjct: 228 QQFPSG---SSMLNSIDLILKMPKYIDFLEFKP 257
>Medtr3g100710.2 | carboxy-terminal domain cyclin | HC |
chr3:46343463-46340451 | 20130731
Length = 333
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 124 ESKPWAIQLLSVACLSLAAKMEEQRVP-PLS-EYPIQGYCFENKVIKNMELLILSTLEWR 181
+ + W +QLL+VACLSLAAK+EE VP PL + + FE K I+ MELL+LSTL+WR
Sbjct: 107 KGRAWTMQLLAVACLSLAAKVEETAVPQPLDLQIGESKFVFEAKTIQRMELLVLSTLKWR 166
Query: 182 MGLATPFAYLHYFVSKFFPGSR--PETIITKATEHIVTMVRDVNLMDQRPXXXXXXXXXX 239
M TPF+++ F+SK + + I+++T+ I + ++ ++ ++ +P
Sbjct: 167 MQAITPFSFIECFLSKIKDDDKSSLSSSISRSTQLISSTIKGLDFLEFKPSEIAAAVATC 226
Query: 240 XFDATLTKKAIDLRISLISSWGNIESEHVFSCYNLIQEKTRDKVKT 285
T +AID S+ + +E + C +QE + + V T
Sbjct: 227 VVGET---QAIDSSKSISTLIQYVEKGRLLKCVGKVQEMSLNSVFT 269
>Medtr8g074000.1 | carboxy-terminal domain cyclin | HC |
chr8:31292669-31296642 | 20130731
Length = 434
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 82 MSARLDAI--DWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLS 139
++ R+ AI DW+ +F +T +L+V DRFL+K+++ K +QL+ + +
Sbjct: 204 LNERMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKK---LQLVGLVAML 260
Query: 140 LAAKMEEQRVPPLSEY-PIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFV 195
LA K EE VP +S+ I + K I ME +L+TL++ M L T + ++ F+
Sbjct: 261 LACKYEEVSVPVVSDLIHIADRAYTRKDILEMEKSMLNTLQYNMSLPTAYVFMRRFL 317
>Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731
Length = 1318
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 89 IDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQR 148
IDW+ + ++F +T YL++ DRFL+ + + +QL+ ++ + +A+K EE
Sbjct: 235 IDWLVDVHSKFELSPETLYLTINIVDRFLAVNLVSRRE---LQLVGISAMLMASKYEEIW 291
Query: 149 VPPLSEYP-IQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFV 195
P ++++ + + ++ I ME IL LEW + + TPF +L F+
Sbjct: 292 PPEVNDFVCLSDRAYSHEQILIMEKTILGKLEWTLTVPTPFVFLVRFI 339
>Medtr5g088980.1 | carboxy-terminal domain cyclin | HC |
chr5:38636983-38633820 | 20130731
Length = 421
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 89 IDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQR 148
IDW+ +F +T YL++ DRFLS +++ + +QL+ ++ + +A+K EE
Sbjct: 201 IDWLIEVHRKFELMPETFYLTLNIVDRFLSTKAVPRKE---LQLVGISSMLIASKYEEIW 257
Query: 149 VPPLSEYP-IQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVSKFFPGSRPETI 207
P ++++ I + + + ME IL LEW + + TP+ +L ++ P
Sbjct: 258 APEVNDFVCISDNAYVREQVLVMEKTILRNLEWYLTVPTPYVFLVRYIKASTPSD----- 312
Query: 208 ITKATEHIVTMVRDVNLM 225
K E +V + ++++M
Sbjct: 313 --KEMESMVNFLAELSMM 328
>Medtr3g102530.1 | carboxy-terminal domain cyclin | HC |
chr3:47254814-47252673 | 20130731
Length = 352
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 77 ERCWMMSARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVA 136
+R + R +DW+ + QT +L+V+Y DRFLS S++ SK +QLL V+
Sbjct: 112 QRGVTANMRGILVDWLVEVAEEYKLLPQTLHLAVSYIDRFLSNESVNRSK---LQLLGVS 168
Query: 137 CLSLAAKMEEQRVPPLSEY-PIQGYCFENKVIKNMELLILSTLEWRMG 183
+ +A+K EE P ++ I +E K + ME IL +L + MG
Sbjct: 169 SMLIASKYEEISPPKAVDFCQITDNTYELKQVIKMEADILKSLNFEMG 216
>Medtr3g060770.1 | carboxy-terminal domain cyclin | LC |
chr3:24109546-24108680 | 20130731
Length = 288
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 88 AIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQ 147
+DW+ T + +T YL V DRFLSK + + ++L+ ++ L LA+K E++
Sbjct: 64 VVDWLIQTHYKQKLMPETLYLCVNILDRFLSKIEFEVTTMDKLKLMGLSSLLLASKYEQR 123
Query: 148 RVPPLSEYPIQG---YCFENKVIKNMELLILSTLEWRMGLATPFAYL 191
V + Y I+G Y + K I ME LIL L W + + TP+ +L
Sbjct: 124 SV--VGVYDIEGMADYIYMPKEICQMEKLILQELGWILTVPTPYVFL 168
>Medtr3g102510.1 | carboxy-terminal domain cyclin | HC |
chr3:47243553-47241418 | 20130731
Length = 340
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 74 DHSERCWMMSARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLL 133
++ +R + R +DW+ + +T +LSV+Y DRFLS + I SK +QLL
Sbjct: 97 ENVQRGITSNMRGTLVDWLVEVADEYTLLPETLHLSVSYIDRFLSNQPIIRSK---LQLL 153
Query: 134 SVACLSLAAKMEEQRVPPLSEY-PIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLH 192
V+ + +A+K EE P ++ I ++ + ME IL TL + MG +L
Sbjct: 154 GVSSMLIASKYEEITPPKAIDFCQITDNTYDLDEVLKMEADILKTLNFEMGNPNVITFLK 213
Query: 193 YFVSKFFPGSRPETIITKATEHIVTMVRDVNLMD 226
FV S + E++ + D++L+D
Sbjct: 214 SFVGI---ASENQKTSNLQFEYLCNYLADISLLD 244
>Medtr3g102520.1 | carboxy-terminal domain cyclin | HC |
chr3:47250517-47247642 | 20130731
Length = 372
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 74 DHSERCWMMSARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLL 133
++ +R + R +DW+ + +T +LSV+Y DRFLS + SK +QLL
Sbjct: 116 ENVQRGISSNMRGTLVDWLVEVADEYKLLPETLHLSVSYIDRFLSIEPVSRSK---LQLL 172
Query: 134 SVACLSLAAKMEEQRVPPLSEY-PIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLH 192
V+ + +A+K EE P ++ I ++ + + ME IL +L + MG +L
Sbjct: 173 GVSSMLIASKYEEITPPKAVDFCQITDNTYDLEEVLKMEADILKSLNFEMGNPNVITFLK 232
Query: 193 YFVS 196
F+
Sbjct: 233 RFIG 236
>Medtr3g088415.3 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40181795 | 20130731
Length = 397
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 83 SARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAA 142
S R IDW+ + T YL+V Y DR+LS ++ + +QLL VA + +A+
Sbjct: 272 SMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQ---LQLLGVASMMIAS 328
Query: 143 KMEEQRVPPLSE--YPIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFV 195
K EE P + E Y F+++V++ ME +L+ L++ M T +L FV
Sbjct: 329 KYEEICAPQVEEFCYITDNTYFKDEVLQ-MESTVLNFLKFEMTAPTIKCFLRRFV 382
>Medtr3g088405.1 | carboxy-terminal domain cyclin | HC |
chr3:40170176-40175369 | 20130731
Length = 510
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 83 SARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAA 142
S R IDW+ + T +L+V Y DR+LS ++++ + +QLL V C+ +AA
Sbjct: 275 SMRAMLIDWLVEVADEYRLLPDTLFLAVNYLDRYLSGKAMNTQQ---LQLLGVTCMMIAA 331
Query: 143 KMEEQRVPPLSEY-PIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFVS 196
K EE P + E+ + + + + ME +L+ L++ M T +L F++
Sbjct: 332 KYEEICAPKVEEFCYVTDNTYSKEQVLEMESSVLNFLKFEMTAPTIRCFLRRFIT 386
>Medtr5g023790.2 | carboxy-terminal domain cyclin | HC |
chr5:9472324-9468437 | 20130731
Length = 357
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 89 IDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQR 148
+DW+ +F +T +L+V DRFL K+S+ K +QL+ + + LA K EE
Sbjct: 209 VDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKK---LQLVGLVAMLLACKYEEVS 265
Query: 149 VPPLSEYP-IQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFV 195
VP + + I + K + ME ++++ L++ + + T + ++ F+
Sbjct: 266 VPVVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFL 313
>Medtr5g023790.3 | carboxy-terminal domain cyclin | HC |
chr5:9472324-9468202 | 20130731
Length = 381
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 89 IDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQR 148
+DW+ +F +T +L+V DRFL K+S+ K +QL+ + + LA K EE
Sbjct: 209 VDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKK---LQLVGLVAMLLACKYEEVS 265
Query: 149 VPPLSEYP-IQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFV 195
VP + + I + K + ME ++++ L++ + + T + ++ F+
Sbjct: 266 VPVVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFL 313
>Medtr3g060410.1 | carboxy-terminal domain cyclin | LC |
chr3:23691060-23693543 | 20130731
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 85 RLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKM 144
R + +DW+ T + +T YL V DR LSK + + ++L+ ++ L LA+K
Sbjct: 136 RKNVVDWLIQTHYQQKLMPETLYLCVNILDRVLSKINFEVKTMEKLKLIGLSSLLLASKY 195
Query: 145 EEQRVPPLSEYP-IQGYCFENKVIKNMELLILSTLEWRMGLATPFAYL 191
E++R + + + Y + + I ME LIL L W + + TP+ +L
Sbjct: 196 EQRRAVGVYDVEYLADYIYMPEEICQMEKLILQELGWILTVPTPYVFL 243
>Medtr3g088415.2 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40182268 | 20130731
Length = 443
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 83 SARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAA 142
S R IDW+ + T YL+V Y DR+LS ++ + +QLL VA + +A+
Sbjct: 272 SMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQ---LQLLGVASMMIAS 328
Query: 143 KMEEQRVPPLSE--YPIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFV 195
K EE P + E Y F+++V++ ME +L+ L++ M T +L FV
Sbjct: 329 KYEEICAPQVEEFCYITDNTYFKDEVLQ-MESTVLNFLKFEMTAPTIKCFLRRFV 382
>Medtr5g023790.1 | carboxy-terminal domain cyclin | HC |
chr5:9472333-9468437 | 20130731
Length = 428
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 89 IDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQR 148
+DW+ +F +T +L+V DRFL K+S+ K +QL+ + + LA K EE
Sbjct: 209 VDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKK---LQLVGLVAMLLACKYEEVS 265
Query: 149 VPPLSEYP-IQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFV 195
VP + + I + K + ME ++++ L++ + + T + ++ F+
Sbjct: 266 VPVVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFL 313
>Medtr3g088415.1 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40182656 | 20130731
Length = 505
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 83 SARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAA 142
S R IDW+ + T YL+V Y DR+LS ++ + +QLL VA + +A+
Sbjct: 272 SMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQ---LQLLGVASMMIAS 328
Query: 143 KMEEQRVPPLSE--YPIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFV 195
K EE P + E Y F+++V++ ME +L+ L++ M T +L FV
Sbjct: 329 KYEEICAPQVEEFCYITDNTYFKDEVLQ-MESTVLNFLKFEMTAPTIKCFLRRFV 382
>Medtr1g011470.1 | carboxy-terminal domain cyclin | HC |
chr1:2038488-2033308 | 20130731
Length = 422
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 89 IDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQR 148
+DW+ F T YL+V DRFLS+R I + + +QLL + C+ +++K EE
Sbjct: 199 VDWLVEVADEFKLVPDTLYLAVNLIDRFLSQRLITKRR---LQLLGITCMLISSKYEEIC 255
Query: 149 VPPLSEY-PIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFV 195
P + ++ I + + + ME +L+ L +++ + T +L F+
Sbjct: 256 APGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFI 303
>Medtr1g018680.1 | carboxy-terminal domain cyclin | HC |
chr1:5434143-5436837 | 20130731
Length = 363
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 83 SARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAA 142
S R +DW+ + T Y SV+Y DRFLS + K +QLL VA + +A+
Sbjct: 125 SMRGVLVDWLVEVAEEYKLVSDTLYFSVSYIDRFLSLNDLTRQK---LQLLGVASMLVAS 181
Query: 143 KMEEQRVPPLSEY-PIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHY 193
K EE + P + ++ I + + + ME IL +L++ +G T +L +
Sbjct: 182 KYEEIKPPEVEDFCYITDNTYSKEEVLTMEADILKSLKFELGGPTIKTFLRH 233
>Medtr3g107970.1 | carboxy-terminal domain cyclin | HC |
chr3:49887211-49892757 | 20130731
Length = 478
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 89 IDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQR 148
IDW+ + T YL+V DRFLS I + + +QLL V C+ +A+K EE
Sbjct: 251 IDWLVEVSEEYKLVPDTLYLTVNLIDRFLSTSLIQKHR---LQLLGVTCMFIASKYEEMC 307
Query: 149 VPPLSEY-PIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYLHYFV 195
P + E+ I + + + ME +L+ L +++ + T ++ F+
Sbjct: 308 APRVEEFCFITDNTYTKEEVVKMEKEVLNLLRFQLSVPTTKTFIRRFI 355
>Medtr3g060820.1 | carboxy-terminal domain cyclin | LC |
chr3:24117223-24116390 | 20130731
Length = 277
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 85 RLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKM 144
R + +DW+ T +T YL V DR LSK + + ++L+ ++ L LA+K
Sbjct: 51 RKNVVDWLIQTHYEQKLMPETLYLCVNVLDRVLSKIKFEVTTVDKLKLIGLSSLLLASKY 110
Query: 145 EEQRVPPLSEYP-IQGYCFENKVIKNMELLILSTLEWRMGLATPFAYL 191
E++ V + + + Y + + I ME LIL L W + + TP+ +L
Sbjct: 111 EQRSVVGVYDVEYMADYIYMPEEICQMEKLILQKLGWILTVPTPYVFL 158
>Medtr3g061680.1 | carboxy-terminal domain cyclin | LC |
chr3:24614151-24614996 | 20130731
Length = 281
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 85 RLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKM 144
R++ +DW+ T +T YL V DR LSK + + ++L+ ++ L LA+K
Sbjct: 51 RMNVVDWLIQTHYEQKLMPETLYLCVNILDRVLSKIKFEVTTMDKLKLIGLSSLLLASKY 110
Query: 145 EEQRVPPLSEYP-IQGYCFENKVIKNMELLILSTLEWRMGLATPFAYL 191
E++ + + + Y + + I ME LIL L W + + TP+ +L
Sbjct: 111 EQRSAVGVYDVEYMADYIYMPEEICQMEKLILQELGWILTVPTPYVFL 158
>Medtr3g460990.1 | carboxy-terminal domain cyclin | LC |
chr3:24061471-24062322 | 20130731
Length = 283
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 85 RLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKM 144
R + +DW+ T +T YL V DR LSK + + ++L+ ++ L LA+K
Sbjct: 57 RKNVVDWLIQTHYEQKLMPETFYLCVNILDRVLSKINFEVKTMEKLKLIGLSSLLLASKY 116
Query: 145 EEQRVPPL--SEYPIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYL 191
E+++ + EY + Y + + I ME LIL L W + + TP+ +L
Sbjct: 117 EQRKAVGVYHVEY-MADYIYMPEEICQMEKLILQELGWILTVPTPYVFL 164
>Medtr3g060400.1 | carboxy-terminal domain cyclin | LC |
chr3:23689234-23690085 | 20130731
Length = 283
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 85 RLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKM 144
R + +DW+ T +T YL V DR LSK + + ++L+ ++ L LA+K
Sbjct: 57 RKNVVDWLIQTHYEQKLMPETFYLCVNILDRVLSKINFEVKTMEKLKLIGLSSLLLASKY 116
Query: 145 EEQRVPPL--SEYPIQGYCFENKVIKNMELLILSTLEWRMGLATPFAYL 191
E+++ + EY + Y + + I ME LIL L W + + TP+ +L
Sbjct: 117 EQRKAVGVYHVEY-MADYIYMPEEICQMEKLILQELGWILTVPTPYVFL 164
>Medtr2g102550.1 | carboxy-terminal domain cyclin | HC |
chr2:44178430-44174949 | 20130731
Length = 429
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 89 IDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQR 148
IDW+ +F T YL+V D FLSK SI+ + +QLL + C+ +A+K EE
Sbjct: 205 IDWLVEVSEQFNLQANTLYLTVYLIDWFLSKNSIEIKR---LQLLGITCMLIASKYEE-- 259
Query: 149 VPPLSEYPIQGYC------FENKVIKNMELLILSTLEWRMGLATPFAYLHYFV 195
++ I+ +C + + + NME+ +L + +++ T +L F+
Sbjct: 260 ---INANHIEDFCVMTDNTYTREEVLNMEIQVLKSSAYQLSAPTTKHFLRRFL 309
>Medtr2g102520.1 | carboxy-terminal domain cyclin | HC |
chr2:44171841-44168809 | 20130731
Length = 479
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 16/120 (13%)
Query: 83 SARLDAIDWIFNTQARFGFCVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAA 142
S R +DW+ + T YL+V D FLSK I+ + +QLL + C+ +A+
Sbjct: 247 SMRAILVDWLVEVSEGYKLQANTLYLTVYLIDWFLSKNCIERER---LQLLGITCMLIAS 303
Query: 143 KMEEQRVPPLSEYPIQGYCF-------ENKVIKNMELLILSTLEWRMGLATPFAYLHYFV 195
K EE P I+ +CF + +V+K +E L+L + +++ T +L F+
Sbjct: 304 KYEEVNAP-----RIEDFCFITDNTYTKEEVVK-LESLVLKSSSYQLFAPTTKTFLRRFL 357