Miyakogusa Predicted Gene

Lj2g3v1964060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1964060.1 Non Characterized Hit- tr|A5AQA3|A5AQA3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.1,0.000000000000006,seg,NULL,CUFF.38091.1
         (196 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g095440.2 | hypothetical protein | HC | chr4:39784896-3978...   147   8e-36
Medtr4g095440.1 | hypothetical protein | HC | chr4:39784413-3978...   147   8e-36

>Medtr4g095440.2 | hypothetical protein | HC |
           chr4:39784896-39782341 | 20130731
          Length = 202

 Score =  147 bits (370), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 121/212 (57%), Gaps = 27/212 (12%)

Query: 1   MEKPVRHCHKEYMRMAMLKHEETFKEQVHELHCLYRIQKILMKNMEASKGIEVI-QGWNI 59
           MEK VR C KEYMRMAMLKHEETFK+QV+ELH LYRIQKILM+NMEA +G+EV  Q W  
Sbjct: 1   MEKLVRSCDKEYMRMAMLKHEETFKQQVYELHRLYRIQKILMQNMEARRGVEVKEQEWYF 60

Query: 60  KNLISLTQNG--HHEGAERNNKMK-----PAMEDISESESDGVXXXXXXXXXXXXXGPSS 112
           KN ISLTQN   HH+G +   ++K     PA E  +ES+ +G+             GPSS
Sbjct: 61  KNAISLTQNANHHHKGGQEKTQIKFDLERPAEEHTAESDDEGL-EIIDETEIELTLGPSS 119

Query: 113 YN-CKKVETQLNXXXXXXXXXXXXXXL-INKT-RCRTHHTNHATRGELCEGMIGLYQVPH 169
           YN  KK+ET L                 INKT R RTHH+N   R E   G+I       
Sbjct: 120 YNRSKKIETPLTSESGHSLSSSSTGSSDINKTRRWRTHHSNGMKREEPS-GII------- 171

Query: 170 STSGNSYDIEEQ-----SKQPPWLFQVLRRSM 196
               +S+ IEEQ      KQ PW FQV+  +M
Sbjct: 172 --RNSSFGIEEQLRQERLKQSPWFFQVMNLNM 201


>Medtr4g095440.1 | hypothetical protein | HC |
           chr4:39784413-39782721 | 20130731
          Length = 202

 Score =  147 bits (370), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 121/212 (57%), Gaps = 27/212 (12%)

Query: 1   MEKPVRHCHKEYMRMAMLKHEETFKEQVHELHCLYRIQKILMKNMEASKGIEVI-QGWNI 59
           MEK VR C KEYMRMAMLKHEETFK+QV+ELH LYRIQKILM+NMEA +G+EV  Q W  
Sbjct: 1   MEKLVRSCDKEYMRMAMLKHEETFKQQVYELHRLYRIQKILMQNMEARRGVEVKEQEWYF 60

Query: 60  KNLISLTQNG--HHEGAERNNKMK-----PAMEDISESESDGVXXXXXXXXXXXXXGPSS 112
           KN ISLTQN   HH+G +   ++K     PA E  +ES+ +G+             GPSS
Sbjct: 61  KNAISLTQNANHHHKGGQEKTQIKFDLERPAEEHTAESDDEGL-EIIDETEIELTLGPSS 119

Query: 113 YN-CKKVETQLNXXXXXXXXXXXXXXL-INKT-RCRTHHTNHATRGELCEGMIGLYQVPH 169
           YN  KK+ET L                 INKT R RTHH+N   R E   G+I       
Sbjct: 120 YNRSKKIETPLTSESGHSLSSSSTGSSDINKTRRWRTHHSNGMKREEPS-GII------- 171

Query: 170 STSGNSYDIEEQ-----SKQPPWLFQVLRRSM 196
               +S+ IEEQ      KQ PW FQV+  +M
Sbjct: 172 --RNSSFGIEEQLRQERLKQSPWFFQVMNLNM 201