Miyakogusa Predicted Gene

Lj2g3v1963040.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1963040.1 Non Characterized Hit- tr|I1J9C9|I1J9C9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.77,0,no
description,Ribonuclease III domain; RNase III
domain-like,Ribonuclease III domain; seg,NULL; Rib,CUFF.38088.1
         (595 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g016070.1 | ribonuclease III domain protein | HC | chr5:56...   901   0.0  
Medtr4g095410.1 | ribonuclease III domain protein | HC | chr4:39...   733   0.0  

>Medtr5g016070.1 | ribonuclease III domain protein | HC |
           chr5:5683701-5689917 | 20130731
          Length = 530

 Score =  901 bits (2328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/504 (85%), Positives = 468/504 (92%), Gaps = 2/504 (0%)

Query: 93  IQILIKNPQSRNPSFRILAVAVDPTKELSKNS-PQRLLKELAERKKITSPK-KGPPRRFI 150
           IQILIKN +SRN    +LAVA+DPTK+  +N+ PQRLLKELAERKKIT+PK K PPRR+I
Sbjct: 27  IQILIKNTKSRNYPLHVLAVAIDPTKDFPRNNNPQRLLKELAERKKITNPKSKSPPRRYI 86

Query: 151 LRPPLDDKKLAERFLNSPQLSLKSFPLLSSCLPSTRLNNADKLWIDEYLLEAKQALGYSL 210
           L+PPLDDKKLAERFLNSPQLSLKSFPLLSSCLPS RLNNADKLWIDEYLLEAKQALGYSL
Sbjct: 87  LKPPLDDKKLAERFLNSPQLSLKSFPLLSSCLPSLRLNNADKLWIDEYLLEAKQALGYSL 146

Query: 211 EPSETLGDDNPAKQFDTLLYLAFQHPSCERTKARHVRSGHSRLLFLGQHVLELALCEFFL 270
           EPSETL DDNPAKQFDTLLYLAFQHPSCERTK +HVRSGHSRL FLGQ+VLELAL EFFL
Sbjct: 147 EPSETLEDDNPAKQFDTLLYLAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFL 206

Query: 271 QRYPRESPGPMRERVYGLIGKRSLPKWIKAASLQNLVFPYDDIDKMLRKDKEGPIKSVFW 330
           QRYPRE PGPMRERVYGLIGK +LPKWIKAASLQNL+FPYD++DK++R+D+EGP+KSVFW
Sbjct: 207 QRYPRELPGPMRERVYGLIGKENLPKWIKAASLQNLIFPYDNMDKIVRRDREGPVKSVFW 266

Query: 331 ALFGAIYLCFGMPEVYRVLFEVFGMDPDAEDCQPRLRRQLEDVDYVSTELETKLSWQDIV 390
           ALFGAIYLCFG+PEVYRVLFEVFGMDPD EDCQPR RRQLEDVDYVS E E KL+WQDIV
Sbjct: 267 ALFGAIYLCFGLPEVYRVLFEVFGMDPDDEDCQPRERRQLEDVDYVSAEFENKLNWQDIV 326

Query: 391 TYKPPPDALFAHPRLFRACVPPGMHRFRGNIWDFDCKPQVMKALGYPLEMTDRIQEITEA 450
            YKPP DALF HPRLFRACVPPGMHRFRGNIWD+D +PQVM+ALGYPLEMTDRI EITEA
Sbjct: 327 AYKPPADALFTHPRLFRACVPPGMHRFRGNIWDYDSRPQVMRALGYPLEMTDRIPEITEA 386

Query: 451 RNIELGLGLQLCFMHPSKYKFEHPRFCFERLEYVGQKIQDLVMAERLLMKHLDAPGMWLQ 510
           RNIELGLGLQLCF+HPSKYKFEHPRFCFERLEYVG+ IQDLVMAERLLMKHLDAPG+WLQ
Sbjct: 387 RNIELGLGLQLCFLHPSKYKFEHPRFCFERLEYVGKTIQDLVMAERLLMKHLDAPGLWLQ 446

Query: 511 ERHRRVLMNKHCGRYLRAKHLHGFMIYHETVQDSYERNRRRRNPASTAVHQALHGLSYLV 570
           E+HRR+L+NK CGRYLRAK LH F+IY + VQ++YERNRRRRNPA+TAV+QA+HGLSYLV
Sbjct: 447 EKHRRILLNKFCGRYLRAKQLHRFIIYDDNVQNAYERNRRRRNPATTAVNQAIHGLSYLV 506

Query: 571 YGKRDVRRLMFEVFDVEQTQPKEV 594
           YGKRDVRRLMFE FD EQ QPKEV
Sbjct: 507 YGKRDVRRLMFEYFDFEQIQPKEV 530


>Medtr4g095410.1 | ribonuclease III domain protein | HC |
           chr4:39773237-39768149 | 20130731
          Length = 530

 Score =  733 bits (1892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/491 (72%), Positives = 409/491 (83%), Gaps = 12/491 (2%)

Query: 106 SFRILAVAVDPTKELSKNSPQRLLKELAERK-KITSP-KKGPPRRFILRPPLDDKKLAER 163
           +  I A+  +P   L  NSPQRLLKEL + K K  SP KK PPR  IL+PPL +K L   
Sbjct: 37  TLHIYALTTNP---LPPNSPQRLLKELEQHKNKTHSPNKKTPPRTTILKPPLRNKNL--- 90

Query: 164 FLNSPQLSLKSFPLLSSCLPSTRLNNADKLWIDEYLLEAKQALGYSLEP-SETLGD-DNP 221
            +NSPQL+L +FPLLSSCLP   L   D  W++ +LLE KQALGY L+P  E LG+ DNP
Sbjct: 91  -INSPQLTLSTFPLLSSCLPHAPLKTTDSAWMETHLLEVKQALGYPLQPFDEMLGEEDNP 149

Query: 222 AKQFDTLLYLAFQHPSCERTKARHVRSGHSRLLFLGQHVLELALCEFFLQRYPRESPGPM 281
           AKQFDTLLYLAFQHP+C R K RHVRS HSRL FLGQ+V+ELAL EFFLQRYPRE+ GPM
Sbjct: 150 AKQFDTLLYLAFQHPTC-RGKGRHVRSAHSRLFFLGQYVIELALGEFFLQRYPREAVGPM 208

Query: 282 RERVYGLIGKRSLPKWIKAASLQNLVFPYDDIDKMLRKDKEGPIKSVFWALFGAIYLCFG 341
           RERV+GL+GK  LPKWIK ASL  LVFP  D+DK++RK++E   KSVFWALFGAIYLCFG
Sbjct: 209 RERVFGLVGKHRLPKWIKNASLHGLVFPNVDMDKLVRKEREQIAKSVFWALFGAIYLCFG 268

Query: 342 MPEVYRVLFEVFGMDPDAEDCQPRLRRQLEDVDYVSTELETKLSWQDIVTYKPPPDALFA 401
           MPEVYR+LFEVFGMDPDAE+CQPRLR+QLED+D+VS E E KLSWQD+V YKPP DALFA
Sbjct: 269 MPEVYRILFEVFGMDPDAEECQPRLRKQLEDIDHVSAEFEGKLSWQDMVAYKPPADALFA 328

Query: 402 HPRLFRACVPPGMHRFRGNIWDFDCKPQVMKALGYPLEMTDRIQEITEARNIELGLGLQL 461
           HPRLFRAC+PPGMHRFRGN+WD+D +P+VM+ LGYPLEMTDRI EITEARN+ELGLGLQL
Sbjct: 329 HPRLFRACIPPGMHRFRGNVWDYDSRPRVMQILGYPLEMTDRIPEITEARNVELGLGLQL 388

Query: 462 CFMHPSKYKFEHPRFCFERLEYVGQKIQDLVMAERLLMKHLDAPGMWLQERHRRVLMNKH 521
           CF+HPS YKF+HPRFC+ERLEY+GQKI DLVMAERLLMKHLDAPG WLQE+HRR LMN++
Sbjct: 389 CFLHPSNYKFDHPRFCYERLEYLGQKIADLVMAERLLMKHLDAPGYWLQEKHRRTLMNRY 448

Query: 522 CGRYLRAKHLHGFMIYHETVQDSYERNRRRRNPASTAVHQALHGLSYLVYGKRDVRRLMF 581
           CG YLRAK LH F+IY + V+ SYER+ R RNPA+ +V QALHGLSY VYGKRDVRRLMF
Sbjct: 449 CGMYLRAKQLHRFIIYSDKVRSSYERSHRLRNPATVSVQQALHGLSYAVYGKRDVRRLMF 508

Query: 582 EVFDVEQTQPK 592
           EVFDVEQ QPK
Sbjct: 509 EVFDVEQIQPK 519