Miyakogusa Predicted Gene
- Lj2g3v1953000.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1953000.1 Non Characterized Hit- tr|G7IU15|G7IU15_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,89.74,0,Q9FN15_ARATH_Q9FN15;,Uncharacterised protein family
Ycf36; DUF1230,Uncharacterised protein family Yc,CUFF.38084.1
(312 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g016100.1 | DUF1230 family protein | HC | chr5:5713781-571... 494 e-140
Medtr5g016100.2 | DUF1230 family protein | HC | chr5:5714484-571... 364 e-101
Medtr1g016360.1 | DUF1230 family protein | HC | chr1:4337804-434... 132 5e-31
Medtr1g016360.3 | DUF1230 family protein | HC | chr1:4337811-434... 122 4e-28
Medtr1g016360.2 | DUF1230 family protein | HC | chr1:4337811-434... 94 2e-19
>Medtr5g016100.1 | DUF1230 family protein | HC |
chr5:5713781-5716307 | 20130731
Length = 312
Score = 494 bits (1271), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/312 (77%), Positives = 254/312 (81%)
Query: 1 MIRLNFYCSLIPNARQARPGSSHGSLIIHNPRASSFPHRVSIKVKAIKDEMXXXXXXXXX 60
MIRLNF+CSLIP ARQ +PGS+HGS II NPRAS F +VSIKVKA+K EM
Sbjct: 1 MIRLNFHCSLIPTARQTKPGSNHGSFIIQNPRASKFSQQVSIKVKAVKGEMNGETSGSSG 60
Query: 61 XXWDPGMEIEVPFEQRPVNEYSSLKDGMLYSWGELGPGSFFLRLGGLWLAVFTVLGAPIS 120
WDPG+EIEVPFEQRPVNEYSSLKDGMLYSWGELGPGSFFLRLGGLWLAVFTVLGAPI+
Sbjct: 61 GSWDPGLEIEVPFEQRPVNEYSSLKDGMLYSWGELGPGSFFLRLGGLWLAVFTVLGAPIA 120
Query: 121 AASFNPSREPLRFILAAGTGTLFIVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQM 180
AASF+PSREPLRFILAAGTGTLFIVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQM
Sbjct: 121 AASFSPSREPLRFILAAGTGTLFIVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQM 180
Query: 181 WVKPPEILARDRLLGSYKVKPVVKLLKQXXXXXXXXXXXXXXXFIFATPVENFFHSTFST 240
WVKPPEILARDRLLGSYKVKPVVKLLKQ FIFATPVENF HSTF+T
Sbjct: 181 WVKPPEILARDRLLGSYKVKPVVKLLKQTLVGTGALLVTGVMLFIFATPVENFLHSTFTT 240
Query: 241 EENKSIAQAPKVNNKFNLRKEELLKLPXXXXXXXXXXXXXXXXXXGRPVYCRDRLHRALA 300
EENKS Q PKVN K+NLRKEELLKLP GRPVYCRDR +RALA
Sbjct: 241 EENKSTVQVPKVNTKYNLRKEELLKLPADVKADDNLAAAAAEAADGRPVYCRDRFYRALA 300
Query: 301 GGQYCKWEDLLK 312
GGQYCKWEDLLK
Sbjct: 301 GGQYCKWEDLLK 312
>Medtr5g016100.2 | DUF1230 family protein | HC |
chr5:5714484-5716307 | 20130731
Length = 225
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/225 (80%), Positives = 186/225 (82%)
Query: 88 MLYSWGELGPGSFFLRLGGLWLAVFTVLGAPISAASFNPSREPLRFILAAGTGTLFIVSL 147
MLYSWGELGPGSFFLRLGGLWLAVFTVLGAPI+AASF+PSREPLRFILAAGTGTLFIVSL
Sbjct: 1 MLYSWGELGPGSFFLRLGGLWLAVFTVLGAPIAAASFSPSREPLRFILAAGTGTLFIVSL 60
Query: 148 IVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEILARDRLLGSYKVKPVVKLLK 207
IVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEILARDRLLGSYKVKPVVKLLK
Sbjct: 61 IVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEILARDRLLGSYKVKPVVKLLK 120
Query: 208 QXXXXXXXXXXXXXXXFIFATPVENFFHSTFSTEENKSIAQAPKVNNKFNLRKEELLKLP 267
Q FIFATPVENF HSTF+TEENKS Q PKVN K+NLRKEELLKLP
Sbjct: 121 QTLVGTGALLVTGVMLFIFATPVENFLHSTFTTEENKSTVQVPKVNTKYNLRKEELLKLP 180
Query: 268 XXXXXXXXXXXXXXXXXXGRPVYCRDRLHRALAGGQYCKWEDLLK 312
GRPVYCRDR +RALAGGQYCKWEDLLK
Sbjct: 181 ADVKADDNLAAAAAEAADGRPVYCRDRFYRALAGGQYCKWEDLLK 225
>Medtr1g016360.1 | DUF1230 family protein | HC |
chr1:4337804-4341109 | 20130731
Length = 252
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 91/143 (63%), Gaps = 1/143 (0%)
Query: 66 GMEIEVPFEQRPVNEYSSLKDGMLYSWGELGPGSFFLRLGGLWLAVFTVLGAPIS-AASF 124
G E VP EQ+P+NEY SL +SW + RL + + ++G P++ +
Sbjct: 50 GTECPVPLEQQPINEYQSLSTSFPFSWAAGDVVEYGSRLFVVGFSFALLVGLPVAWFGTV 109
Query: 125 NPSREPLRFILAAGTGTLFIVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQMWVKP 184
EP + I+ A + + V+ V+R+YLGW+YVG+RLLSA + YEE+GWYDGQ+WVK
Sbjct: 110 GAQYEPAKRIVCAASSGVLAVTFAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKT 169
Query: 185 PEILARDRLLGSYKVKPVVKLLK 207
E+LARDRLLGS+ VKPV+ LK
Sbjct: 170 AEVLARDRLLGSFSVKPVLSRLK 192
>Medtr1g016360.3 | DUF1230 family protein | HC |
chr1:4337811-4340537 | 20130731
Length = 193
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Query: 66 GMEIEVPFEQRPVNEYSSLKDGMLYSWGELGPGSFFLRLGGLWLAVFTVLGAPIS-AASF 124
G E VP EQ+P+NEY SL +SW + RL + + ++G P++ +
Sbjct: 50 GTECPVPLEQQPINEYQSLSTSFPFSWAAGDVVEYGSRLFVVGFSFALLVGLPVAWFGTV 109
Query: 125 NPSREPLRFILAAGTGTLFIVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQMWVKP 184
EP + I+ A + + V+ V+R+YLGW+YVG+RLLSA + YEE+GWYDGQ+WVK
Sbjct: 110 GAQYEPAKRIVCAASSGVLAVTFAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKT 169
Query: 185 PEILARDRLLGSYKVK 200
E+LARDRLLGS+ V
Sbjct: 170 AEVLARDRLLGSFSVS 185
>Medtr1g016360.2 | DUF1230 family protein | HC |
chr1:4337811-4341109 | 20130731
Length = 198
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 66 GMEIEVPFEQRPVNEYSSLKDGMLYSWGELGPGSFFLRLGGLWLAVFTVLGAPIS-AASF 124
G E VP EQ+P+NEY SL +SW + RL + + ++G P++ +
Sbjct: 50 GTECPVPLEQQPINEYQSLSTSFPFSWAAGDVVEYGSRLFVVGFSFALLVGLPVAWFGTV 109
Query: 125 NPSREPLRFILAAGTGTLFIVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQMWVK 183
EP + I+ A + + V+ V+R+YLGW+YVG+RLLSA + YEE+GWYDGQ+++
Sbjct: 110 GAQYEPAKRIVCAASSGVLAVTFAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQVFIS 168