Miyakogusa Predicted Gene

Lj2g3v1903410.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1903410.1 tr|A9RNM6|A9RNM6_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,34.38,1e-17,BETA-1,3-GLUCURONYLTRANSFERASE,NULL;
GALACTOSYLGALACTOSYLXYLOSYLPROTEIN
3-BETA-GLUCURONOSYLTRANSFERA,CUFF.38048.1
         (243 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g016600.1 | beta-1,4-xylosyltransferase, putative | HC | c...   350   6e-97
Medtr4g094912.1 | beta-1,4-xylosyltransferase, putative | HC | c...   317   9e-87
Medtr3g110142.4 | beta-1,4-xylosyltransferase, putative | HC | c...    61   8e-10
Medtr3g110142.1 | beta-1,4-xylosyltransferase, putative | HC | c...    61   8e-10
Medtr3g111060.1 | beta-1,4-xylosyltransferase, putative | HC | c...    55   4e-08

>Medtr5g016600.1 | beta-1,4-xylosyltransferase, putative | HC |
           chr5:5971526-5967013 | 20130731
          Length = 504

 Score =  350 bits (899), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 181/254 (71%), Positives = 191/254 (75%), Gaps = 11/254 (4%)

Query: 1   MFADDSNMHSMELFDEIQRVKWIGAVSVGILLHXXXXXXXXXXXXX-----XXLIPVQGP 55
           MFADDSNMH+MELFDEIQ VKWIGAVSVGILLH                     +PVQGP
Sbjct: 249 MFADDSNMHNMELFDEIQSVKWIGAVSVGILLHSVDAAEISSLVQKEGDEDTMPMPVQGP 308

Query: 56  ACNATDKLVGWHTFNSLRYTGRSAVYIDDRAPVLPRKLEWSGFVLNSRLLWKDLDDRPEW 115
           ACN TDKLVGWHTFNSLRYTGR AVYIDDRAPVLP K EWSGFVLNSRLLWKD+DD+PEW
Sbjct: 309 ACNGTDKLVGWHTFNSLRYTGRHAVYIDDRAPVLPTKFEWSGFVLNSRLLWKDVDDKPEW 368

Query: 116 IKDLDAVD---EGIESPLSLVKSTSAVEPLGNCGRQVLLWWLRVEARTDSKFPARWIIDP 172
           IKDLDA+D   E IESPLSL+KSTS VEPLG+CGR VLLWWLRVEARTDSKFPARW+IDP
Sbjct: 369 IKDLDALDGDGEKIESPLSLLKSTSVVEPLGSCGRHVLLWWLRVEARTDSKFPARWVIDP 428

Query: 173 PLDITVPSKRTPWPDAPPELPS--NEKVF-TGTEEQTNXXXXXXXXXXXXXXXXXXXXXX 229
           PLDITVPSKRTPWPD+PPELPS  NEKVF  G E  +N                      
Sbjct: 429 PLDITVPSKRTPWPDSPPELPSNENEKVFAAGAEVHSNTHTTKTKTPRSRRSRSKRKHDT 488

Query: 230 XVIGVQVSTHSEQN 243
            VIGVQVSTHSEQ 
Sbjct: 489 KVIGVQVSTHSEQT 502


>Medtr4g094912.1 | beta-1,4-xylosyltransferase, putative | HC |
           chr4:39271094-39277680 | 20130731
          Length = 500

 Score =  317 bits (811), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 161/246 (65%), Positives = 180/246 (73%), Gaps = 3/246 (1%)

Query: 1   MFADDSNMHSMELFDEIQRVKWIGAVSVGILLHXXXXXXXXXXXXXXXLIPVQGPACNAT 60
           MFADDSNMHSMELFDEIQ VKWIGAVSVGIL+                 +PVQGPACNAT
Sbjct: 255 MFADDSNMHSMELFDEIQSVKWIGAVSVGILVQSDTDESSTSLKEEVPPMPVQGPACNAT 314

Query: 61  DKLVGWHTFNSLRYTGRSAVYIDDRAPVLPRKLEWSGFVLNSRLLWKDLDDRPEWIKDL- 119
           + LVG HT++SL+Y  R AVYI DRAPVLPRKLEWSGFVLNSRL+WKDLDD+P+WIKD+ 
Sbjct: 315 NHLVGLHTYDSLKYARRGAVYIGDRAPVLPRKLEWSGFVLNSRLVWKDLDDKPDWIKDIN 374

Query: 120 --DAVDEGIESPLSLVKSTSAVEPLGNCGRQVLLWWLRVEARTDSKFPARWIIDPPLDIT 177
             D VDE I+SPLSL+K  S +EPLG+CGRQVLLWWLRVEARTDSKFP RW ID PLDIT
Sbjct: 375 AFDGVDEDIDSPLSLLKDISVLEPLGSCGRQVLLWWLRVEARTDSKFPPRWTIDTPLDIT 434

Query: 178 VPSKRTPWPDAPPELPSNEKVFTGTEEQTNXXXXXXXXXXXXXXXXXXXXXXXVIGVQVS 237
           VPSK TPWPDAPP +P NEKV  G++EQT                        VIGVQ S
Sbjct: 435 VPSKHTPWPDAPPVIPINEKVVIGSQEQTTKHSTKTKTSRPRRSRSKRKHDTKVIGVQAS 494

Query: 238 THSEQN 243
           T SE++
Sbjct: 495 TLSEEH 500


>Medtr3g110142.4 | beta-1,4-xylosyltransferase, putative | HC |
           chr3:51104209-51107598 | 20130731
          Length = 438

 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 40/185 (21%)

Query: 2   FADDSNMHSMELFDEIQRVKWIGAVSVGILLHXXXXXXXXXXXXXXXLIPVQGPACNATD 61
           FA++ N++S+ELF +++ ++  G  +V  L                  I +QGP CN ++
Sbjct: 277 FANNDNIYSVELFQQMREIRRFGTWTVARL------------SKDRSGILLQGPICNGSE 324

Query: 62  KLVGWHTFNSLRYTGRSAVYIDDRAPVLPRKLEWSGFVLNSRLLWKDLDDRPEW------ 115
            ++GWHT N     G S  +            E  GF  NS +LW    D  +W      
Sbjct: 325 -VIGWHTNN--ESGGNSKRF----------HAEMQGFAFNSTILW----DPKKWHRPSLK 367

Query: 116 -IKDLDAVDEGI-ESPL--SLVKSTSAVEPLGNCGRQVLLWWLRVEARTDSKFPARWIID 171
            I+ L++V E +  S L   +VK  S +E L N   +V++W + +E+ + S +P +WI +
Sbjct: 368 PIRQLESVKENLWVSTLIEQIVKDESEMEGLMNDCSRVMVWNIDLES-SYSFYPKKWITE 426

Query: 172 PPLDI 176
             LD+
Sbjct: 427 NNLDV 431


>Medtr3g110142.1 | beta-1,4-xylosyltransferase, putative | HC |
           chr3:51104209-51107598 | 20130731
          Length = 438

 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 40/185 (21%)

Query: 2   FADDSNMHSMELFDEIQRVKWIGAVSVGILLHXXXXXXXXXXXXXXXLIPVQGPACNATD 61
           FA++ N++S+ELF +++ ++  G  +V  L                  I +QGP CN ++
Sbjct: 277 FANNDNIYSVELFQQMREIRRFGTWTVARL------------SKDRSGILLQGPICNGSE 324

Query: 62  KLVGWHTFNSLRYTGRSAVYIDDRAPVLPRKLEWSGFVLNSRLLWKDLDDRPEW------ 115
            ++GWHT N     G S  +            E  GF  NS +LW    D  +W      
Sbjct: 325 -VIGWHTNN--ESGGNSKRF----------HAEMQGFAFNSTILW----DPKKWHRPSLK 367

Query: 116 -IKDLDAVDEGI-ESPL--SLVKSTSAVEPLGNCGRQVLLWWLRVEARTDSKFPARWIID 171
            I+ L++V E +  S L   +VK  S +E L N   +V++W + +E+ + S +P +WI +
Sbjct: 368 PIRQLESVKENLWVSTLIEQIVKDESEMEGLMNDCSRVMVWNIDLES-SYSFYPKKWITE 426

Query: 172 PPLDI 176
             LD+
Sbjct: 427 NNLDV 431


>Medtr3g111060.1 | beta-1,4-xylosyltransferase, putative | HC |
           chr3:51891978-51896004 | 20130731
          Length = 441

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 43/191 (22%)

Query: 2   FADDSNMHSMELFDEIQRVKWIGAVSVGILLHXXXXXXXXXXXXXXXLIPVQGPACNATD 61
           FADD N++S++LF  I+ +   G   V +L                    ++GP CN + 
Sbjct: 283 FADDDNVYSLDLFQTIRDISRFGTWPVAMLAPSKNKAI------------LEGPVCNGS- 329

Query: 62  KLVGWHTFNSLRYTGRSAVYIDDRAPVLPR-KLEWSGFVLNSRLLWKDLDDRPEW----- 115
           +++GWHT              ++++  L R  ++ SGF  NS +LW    D   W     
Sbjct: 330 QVLGWHT--------------NEKSKRLRRFHVDMSGFAFNSTILW----DPKRWRRPTS 371

Query: 116 --IKDLDAVDEGIESPL---SLVKSTSAVEPLGNCGRQVLLWWLRVEARTDSKFPARWII 170
             I+ LD+V EG +       LV+  S +E      ++++ W L +    +  +P  W++
Sbjct: 372 NPIRQLDSVKEGFQETTFIEQLVEDESQMEGSPPGCKKIMNWHLHLNVH-NIVYPKGWML 430

Query: 171 DPPLDITVPSK 181
           +  LD  +  K
Sbjct: 431 EKNLDAVIHIK 441