Miyakogusa Predicted Gene

Lj2g3v1902120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1902120.1 tr|A9TF35|A9TF35_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_169716,79.37,5e-18,seg,NULL;
coiled-coil,NULL,CUFF.38125.1
         (190 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g100090.2 | plant/F6N7-3 protein, putative | HC | chr1:450...   165   2e-41
Medtr1g100090.1 | plant/F6N7-3 protein, putative | HC | chr1:450...   165   2e-41

>Medtr1g100090.2 | plant/F6N7-3 protein, putative | HC |
           chr1:45090749-45093262 | 20130731
          Length = 166

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 89/141 (63%), Positives = 98/141 (69%), Gaps = 7/141 (4%)

Query: 1   MDSMACNX-XXXXXXXXXXXXXDELDRLKQAEKKKRRLEKALSTSAAIISELGXXXXXXX 59
           MD+MACN               DELDRLKQAEKKKRRLEKAL+TSAAIISEL        
Sbjct: 7   MDNMACNKGQQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKK 66

Query: 60  XXXXRLDEEGAAIAEAVALHVLLGEDSDESCNVVINEGGCNSW-NYNHGLDFFMGGKRAC 118
               RLDEEGAAIAEAVALHVLL EDSD+S  V      C +W +YN+ LDFFM GKRAC
Sbjct: 67  EEQQRLDEEGAAIAEAVALHVLLDEDSDDSYKV-----ECKTWDDYNNNLDFFMSGKRAC 121

Query: 119 FPHLDGGTWSVTAENGNWSFS 139
           FP+LDG TWSVT++NG WS S
Sbjct: 122 FPNLDGSTWSVTSQNGKWSIS 142


>Medtr1g100090.1 | plant/F6N7-3 protein, putative | HC |
           chr1:45090718-45093388 | 20130731
          Length = 166

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 89/141 (63%), Positives = 98/141 (69%), Gaps = 7/141 (4%)

Query: 1   MDSMACNX-XXXXXXXXXXXXXDELDRLKQAEKKKRRLEKALSTSAAIISELGXXXXXXX 59
           MD+MACN               DELDRLKQAEKKKRRLEKAL+TSAAIISEL        
Sbjct: 7   MDNMACNKGQQHARKTKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKK 66

Query: 60  XXXXRLDEEGAAIAEAVALHVLLGEDSDESCNVVINEGGCNSW-NYNHGLDFFMGGKRAC 118
               RLDEEGAAIAEAVALHVLL EDSD+S  V      C +W +YN+ LDFFM GKRAC
Sbjct: 67  EEQQRLDEEGAAIAEAVALHVLLDEDSDDSYKV-----ECKTWDDYNNNLDFFMSGKRAC 121

Query: 119 FPHLDGGTWSVTAENGNWSFS 139
           FP+LDG TWSVT++NG WS S
Sbjct: 122 FPNLDGSTWSVTSQNGKWSIS 142