Miyakogusa Predicted Gene

Lj2g3v1902090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1902090.1 Non Characterized Hit- tr|I3SFH9|I3SFH9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,71.67,9e-17,
,NODE_54688_length_819_cov_69.838829.path1.1
         (60 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0123s0070.1 | myb transcription factor | HC | scaffold0123:...    90   5e-19
Medtr8g028655.1 | myb transcription factor | HC | chr8:10999892-...    65   2e-11
Medtr0123s0070.2 | myb transcription factor | HC | scaffold0123:...    52   9e-08
Medtr1g067000.2 | myb transcription factor | HC | chr1:28822118-...    49   9e-07
Medtr1g067000.1 | myb transcription factor | HC | chr1:28822118-...    49   9e-07

>Medtr0123s0070.1 | myb transcription factor | HC |
           scaffold0123:45193-37242 | 20130731
          Length = 307

 Score = 89.7 bits (221), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 43/60 (71%), Positives = 53/60 (88%)

Query: 1   MDPLDVETVLLLMRNLSINLTSPGFEDHRRLLASYEVEPEIDNYINVDQAMHDEQLKSAT 60
           MD +DVETVLLLMRNLSINLTSP FEDH++LL+SYEV+ E ++Y+N D+ +HDE LKSAT
Sbjct: 247 MDRIDVETVLLLMRNLSINLTSPDFEDHKKLLSSYEVDLETNSYLNPDRPIHDEPLKSAT 306


>Medtr8g028655.1 | myb transcription factor | HC |
           chr8:10999892-11006608 | 20130731
          Length = 333

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/46 (67%), Positives = 38/46 (82%)

Query: 1   MDPLDVETVLLLMRNLSINLTSPGFEDHRRLLASYEVEPEIDNYIN 46
           MDP++VET LLLMRNLSINLTSP FEDH+RLL+SY+ + E   + N
Sbjct: 271 MDPINVETSLLLMRNLSINLTSPEFEDHKRLLSSYDPDCEKAKFAN 316


>Medtr0123s0070.2 | myb transcription factor | HC |
           scaffold0123:45193-37193 | 20130731
          Length = 286

 Score = 52.4 bits (124), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 25/28 (89%), Positives = 26/28 (92%)

Query: 1   MDPLDVETVLLLMRNLSINLTSPGFEDH 28
           MD +DVETVLLLMRNLSINLTSP FEDH
Sbjct: 247 MDRIDVETVLLLMRNLSINLTSPDFEDH 274


>Medtr1g067000.2 | myb transcription factor | HC |
           chr1:28822118-28815959 | 20130731
          Length = 298

 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 31/36 (86%)

Query: 1   MDPLDVETVLLLMRNLSINLTSPGFEDHRRLLASYE 36
           MDP++ ETVLLLMRNL++NL+SP F+  ++ +++Y+
Sbjct: 240 MDPINFETVLLLMRNLTVNLSSPNFDPIKKAMSTYD 275


>Medtr1g067000.1 | myb transcription factor | HC |
           chr1:28822118-28815959 | 20130731
          Length = 298

 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 31/36 (86%)

Query: 1   MDPLDVETVLLLMRNLSINLTSPGFEDHRRLLASYE 36
           MDP++ ETVLLLMRNL++NL+SP F+  ++ +++Y+
Sbjct: 240 MDPINFETVLLLMRNLTVNLSSPNFDPIKKAMSTYD 275