Miyakogusa Predicted Gene
- Lj2g3v1890920.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1890920.1 tr|G7K5C3|G7K5C3_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_5g016930 PE=4 SV=1,85.19,2e-18,LRR_6,NULL;
F-box-like,NULL; F-BOX/LEUCINE RICH REPEAT PROTEIN,NULL;
RNI-like,NULL; no description,N,CUFF.38018.1
(208 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g016890.1 | ubiquitin ligase complex F-box protein GRR1, p... 384 e-107
Medtr5g016930.1 | F-box plant-like protein | HC | chr5:6123410-6... 97 7e-21
Medtr8g017160.1 | F-box/LRR protein, putative | LC | chr8:576612... 62 5e-10
Medtr1g023530.1 | F-box/LRR protein, putative | LC | chr1:755565... 61 9e-10
Medtr1g069145.1 | F-box/RNI superfamily protein | HC | chr1:2971... 59 3e-09
Medtr4g008420.1 | F-box/LRR protein | LC | chr4:1523904-1524824 ... 59 3e-09
Medtr3g074570.1 | F-box/LRR protein | LC | chr3:33713668-3371514... 59 3e-09
Medtr8g028140.3 | F-box/LRR protein | HC | chr8:10474708-1047168... 59 4e-09
Medtr8g028140.1 | F-box/LRR protein | HC | chr8:10472875-1047168... 59 4e-09
Medtr8g028140.2 | F-box/LRR protein | HC | chr8:10472875-1047168... 59 4e-09
Medtr8g037780.1 | F-box/LRR protein, putative | LC | chr8:140046... 59 4e-09
Medtr3g088895.2 | F-box SKP2A-like protein | HC | chr3:40692425-... 59 5e-09
Medtr3g088895.1 | F-box SKP2A-like protein | HC | chr3:40692425-... 59 5e-09
Medtr3g074550.1 | F-box/RNI superfamily protein | LC | chr3:3370... 57 1e-08
Medtr1g069090.1 | F-box/LRR protein | LC | chr1:29657573-2965922... 57 1e-08
Medtr8g076010.1 | RNI superfamily protein, putative | LC | chr8:... 57 1e-08
Medtr5g075860.1 | F-box/LRR protein | LC | chr5:32268933-3226723... 57 2e-08
Medtr2g104970.1 | F-box/RNI superfamily protein | LC | chr2:4524... 56 2e-08
Medtr4g094932.1 | F-box protein SKIP2 | HC | chr4:39315059-39312... 56 3e-08
Medtr4g008340.1 | F-box/RNI superfamily protein, putative | LC |... 55 4e-08
Medtr2g007590.1 | F-box/LRR protein, putative | LC | chr2:103601... 55 5e-08
Medtr4g133640.1 | F-box/LRR protein, putative | LC | chr4:559072... 55 6e-08
Medtr6g016740.1 | F-box/LRR protein, putative | LC | chr6:642433... 55 6e-08
Medtr4g019320.1 | F-box/LRR protein | HC | chr4:6007909-6006085 ... 55 6e-08
Medtr4g008400.1 | F-box/RNI superfamily protein, putative | LC |... 55 7e-08
Medtr1g115380.1 | F-box/LRR protein | LC | chr1:52085675-5208233... 54 8e-08
Medtr1g029500.1 | F-box SKP2A-like protein | HC | chr1:10133328-... 54 8e-08
Medtr4g114640.1 | EIN3-binding F-box-like protein | HC | chr4:47... 54 9e-08
Medtr1g054625.2 | F-box/LRR protein | HC | chr1:23749689-2374405... 54 9e-08
Medtr4g021765.1 | F-box/LRR protein | LC | chr4:7225211-7226221 ... 54 1e-07
Medtr2g103530.1 | RNI superfamily protein, putative | LC | chr2:... 54 1e-07
Medtr1g054625.1 | F-box/LRR protein | HC | chr1:23749689-2374406... 54 1e-07
Medtr5g088250.1 | F-box/LRR protein | LC | chr5:38264630-3826790... 54 1e-07
Medtr4g006280.1 | transmembrane protein, putative | LC | chr4:56... 53 2e-07
Medtr3g110148.1 | RNI superfamily protein | LC | chr3:51112873-5... 53 2e-07
Medtr1g012520.1 | EIN3-binding F-box-like protein | HC | chr1:25... 53 2e-07
Medtr7g007780.3 | armadillo/beta-catenin repeat protein | HC | c... 53 2e-07
Medtr7g007780.2 | armadillo/beta-catenin repeat protein | HC | c... 53 2e-07
Medtr7g007780.1 | armadillo/beta-catenin repeat protein | HC | c... 53 2e-07
Medtr4g024200.1 | F-box/RNI superfamily protein | LC | chr4:8186... 53 2e-07
Medtr3g107280.1 | EIN3-binding F-box-like protein | HC | chr3:49... 53 2e-07
Medtr3g110150.1 | F-box/LRR protein, putative | LC | chr3:511203... 53 3e-07
Medtr7g100890.1 | DNA-binding protein S1FA | HC | chr7:40664231-... 52 4e-07
Medtr6g016915.1 | F-box/RNI superfamily protein | LC | chr6:6602... 52 5e-07
Medtr4g006240.1 | F-box/LRR protein | LC | chr4:548401-546674 | ... 51 7e-07
Medtr3g081260.1 | F-box/LRR protein, putative | LC | chr3:368100... 51 7e-07
Medtr5g095830.1 | F-box/LRR protein | LC | chr5:41899987-4190286... 51 9e-07
Medtr6g027420.1 | RNI superfamily protein, putative | LC | chr6:... 51 1e-06
Medtr6g016905.1 | F-box/LRR protein | LC | chr6:6587907-6589583 ... 50 1e-06
Medtr4g008490.1 | F-box/RNI superfamily protein | LC | chr4:1552... 50 1e-06
Medtr7g112570.3 | F-box/LRR protein | HC | chr7:46304993-4630923... 50 1e-06
Medtr7g112570.2 | F-box/LRR protein | HC | chr7:46304993-4630999... 50 2e-06
Medtr7g112570.1 | F-box/LRR protein | HC | chr7:46304931-4631002... 50 2e-06
Medtr4g006450.1 | F-box/LRR protein | LC | chr4:642402-640670 | ... 50 2e-06
Medtr6g042905.1 | F-box/RNI superfamily protein | LC | chr6:1482... 49 3e-06
Medtr3g006050.1 | F-box/LRR protein, putative | HC | chr3:513212... 49 4e-06
Medtr4g009030.1 | F-box/LRR protein | HC | chr4:1743950-1742277 ... 49 4e-06
Medtr4g008380.1 | F-box/RNI superfamily protein | LC | chr4:1508... 48 5e-06
Medtr4g021835.1 | F-box/RNI superfamily protein | LC | chr4:7309... 48 5e-06
Medtr1g114610.1 | F-box/LRR protein | HC | chr1:51737951-5174122... 48 6e-06
Medtr6g080560.1 | RNI superfamily protein, putative | LC | chr6:... 48 7e-06
Medtr6g054950.1 | F-box/RNI superfamily protein, putative | LC |... 47 9e-06
>Medtr5g016890.1 | ubiquitin ligase complex F-box protein GRR1,
putative | HC | chr5:6113172-6110853 | 20130731
Length = 211
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/206 (89%), Positives = 198/206 (96%)
Query: 3 EIDRLPIDLLAHIFGLFTSFTDLAQSSSVCKKWKQGVKESLARKQNLSFAGWKMDDDSTA 62
EIDRLPIDLLAHIF LFTSFTDLAQ+S VCKKWKQGVKESLAR+QNLSFAGWKMDDDST+
Sbjct: 6 EIDRLPIDLLAHIFVLFTSFTDLAQASKVCKKWKQGVKESLARRQNLSFAGWKMDDDSTS 65
Query: 63 RLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLI 122
RLVSHAYNL+KLDIPRSRW CQITDAGLIRIS+AKC+ NLTSISLWGLTGITDEGVV+LI
Sbjct: 66 RLVSHAYNLRKLDIPRSRWSCQITDAGLIRISYAKCINNLTSISLWGLTGITDEGVVKLI 125
Query: 123 SRTRSLQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSM 182
SRT+SL+HLNVGGTFITDESLFAIARSCPK+ETIVLWSCRHVTENGLIALVD CLKLKSM
Sbjct: 126 SRTKSLRHLNVGGTFITDESLFAIARSCPKMETIVLWSCRHVTENGLIALVDQCLKLKSM 185
Query: 183 NLWGTRVPVDCLSNLLLASQTLQIKV 208
N+WG RVPVDCL+NLL+ S TLQIK+
Sbjct: 186 NVWGLRVPVDCLNNLLIMSPTLQIKI 211
>Medtr5g016930.1 | F-box plant-like protein | HC |
chr5:6123410-6122504 | 20130731
Length = 60
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/54 (85%), Positives = 50/54 (92%)
Query: 155 TIVLWSCRHVTENGLIALVDNCLKLKSMNLWGTRVPVDCLSNLLLASQTLQIKV 208
TIVLWSCRHVTENGLIALVD CLKLKSMN+WG RVPVDCL+NLL+ S TLQIK+
Sbjct: 7 TIVLWSCRHVTENGLIALVDQCLKLKSMNVWGLRVPVDCLNNLLIMSPTLQIKI 60
>Medtr8g017160.1 | F-box/LRR protein, putative | LC |
chr8:5766126-5769371 | 20130731
Length = 598
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 93 ISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNV--------GGTF------- 137
I FA NL + L IT+EG+ L+ R ++HLN+ G F
Sbjct: 436 IMFAALFPNLQQLHLSCSYNITEEGIRPLLESCRKIRHLNLTCLSLKSLGTNFDLPDLEV 495
Query: 138 -------ITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWG 186
+ DE+L+ I+ CP L +VL C ++T+ G++ +V+NC +L+ +NL G
Sbjct: 496 LNLTNTEVDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDG 551
>Medtr1g023530.1 | F-box/LRR protein, putative | LC |
chr1:7555650-7554246 | 20130731
Length = 456
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%)
Query: 96 AKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGGTFITDESLFAIARSCPKLET 155
A NL + L I+ EG+ ++ R +++HLN+ T + DE+L+ I++SC L
Sbjct: 320 ASIFPNLELLDLKNCYDISKEGIFHILRRCHNIRHLNLSYTSVDDEALYMISKSCGGLLQ 379
Query: 156 IVLWSCRHVTENGLIALVDNCLKLKSMNLWG 186
++L C +VTE G+ +V+NC LK +NL
Sbjct: 380 LLLKGCDNVTEKGVKHVVENCTLLKEINLQN 410
>Medtr1g069145.1 | F-box/RNI superfamily protein | HC |
chr1:29717696-29719300 | 20130731
Length = 523
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 48 NLSFAGWKMDDDSTARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSISL 107
N S G +D ++ +VS +K L + R ++ + D +I FA NL + L
Sbjct: 345 NESIGGGGREDSNSFAVVSP--KVKSLCLARCQY---LRDQNIIL--FASIFPNLEVLDL 397
Query: 108 WGLTGITDEGVVQLISRTRSLQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTEN 167
+++E V +++ ++HLN+ T + D+SL I+ SC L ++L SC +VTEN
Sbjct: 398 SYWKEVSEETVSKVLRCCTKIKHLNLSYTNVDDKSLHIISTSCCGLLQLLLESCMNVTEN 457
Query: 168 GLIALVDNCLKLKSMNL-WGTRVPVDCLSNLLLASQTLQ 205
G+ +V NC +L+ +NL + ++ + +S+++L+ +L+
Sbjct: 458 GVKHVVQNCKQLREINLRYIDQLNANVVSSMVLSRPSLR 496
>Medtr4g008420.1 | F-box/LRR protein | LC | chr4:1523904-1524824 |
20130731
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 25/134 (18%)
Query: 96 AKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGG-------------------- 135
A C NL + L + +++EG++Q++ R L+HLN+
Sbjct: 148 ADCFPNLQLLDLSYCSYVSEEGILQVLRRCCKLRHLNLANCSKIELHGMNFEVPNLEVLN 207
Query: 136 ---TFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWG-TRVPV 191
T + DE+L+ I++SC L ++L SC +VTE G+ +++NC +L+ +NL G +V
Sbjct: 208 LSRTSVDDETLYMISQSCRGLLQLLLRSC-YVTERGVNYVIENCTQLREINLRGCCKVHA 266
Query: 192 DCLSNLLLASQTLQ 205
++++LL+ +L+
Sbjct: 267 SFVASMLLSRPSLR 280
>Medtr3g074570.1 | F-box/LRR protein | LC | chr3:33713668-33715148 |
20130731
Length = 445
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 128 LQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL-WG 186
L+ LN+ + I D +L+AI++SCP+L + L C HVTE G+ ++DNC+ L+ +NL +
Sbjct: 357 LEVLNLSNSRIDDGALYAISKSCPRLLHLDLEDCHHVTEKGVRLVLDNCVHLREINLQYC 416
Query: 187 TRVPVDCLSNLLLASQTLQ 205
+V D ++ ++L +L+
Sbjct: 417 PKVFADTVAKMILLRPSLR 435
>Medtr8g028140.3 | F-box/LRR protein | HC | chr8:10474708-10471688 |
20130731
Length = 315
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 101 NLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGGTF-ITDESLFAIARSCPKLETIVLW 159
+L S+SL G T + D G+ +L+S +LQ LN+ +T+ L +A CP L TI L+
Sbjct: 16 HLESLSLCGCTELDDSGLTRLLSYGSNLQKLNLDCCLKVTNYGLSLVASGCPSLTTISLY 75
Query: 160 SCRHVTENGLIALVDNCLKLKSMNL 184
C +T+ GL L CL LK +NL
Sbjct: 76 RCLIITDEGLETLTTACLSLKCINL 100
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
Query: 47 QNLSFAGW-KMDDDSTARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSI 105
++LS G ++DD RL+S+ NL+KL++ ++T+ GL + A +LT+I
Sbjct: 18 ESLSLCGCTELDDSGLTRLLSYGSNLQKLNLDCCL---KVTNYGLSLV--ASGCPSLTTI 72
Query: 106 SLWGLTGITDEGVVQLISRTRSLQHLNVG-GTFITDESLFAIARSCPKLETIVLWSCRHV 164
SL+ ITDEG+ L + SL+ +N+ + I+D+ L A+ + C +L+ I + C +
Sbjct: 73 SLYRCLIITDEGLETLTTACLSLKCINLSYCSQISDKGLKALTQQCRQLQAINVSHCERI 132
Query: 165 TENGL 169
+ G
Sbjct: 133 SGVGF 137
>Medtr8g028140.1 | F-box/LRR protein | HC | chr8:10472875-10471688 |
20130731
Length = 395
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 101 NLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGGTF-ITDESLFAIARSCPKLETIVLW 159
+L S+SL G T + D G+ +L+S +LQ LN+ +T+ L +A CP L TI L+
Sbjct: 96 HLESLSLCGCTELDDSGLTRLLSYGSNLQKLNLDCCLKVTNYGLSLVASGCPSLTTISLY 155
Query: 160 SCRHVTENGLIALVDNCLKLKSMNL 184
C +T+ GL L CL LK +NL
Sbjct: 156 RCLIITDEGLETLTTACLSLKCINL 180
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
Query: 47 QNLSFAGW-KMDDDSTARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSI 105
++LS G ++DD RL+S+ NL+KL++ ++T+ GL + A +LT+I
Sbjct: 98 ESLSLCGCTELDDSGLTRLLSYGSNLQKLNLD---CCLKVTNYGLSLV--ASGCPSLTTI 152
Query: 106 SLWGLTGITDEGVVQLISRTRSLQHLNVG-GTFITDESLFAIARSCPKLETIVLWSCRHV 164
SL+ ITDEG+ L + SL+ +N+ + I+D+ L A+ + C +L+ I + C +
Sbjct: 153 SLYRCLIITDEGLETLTTACLSLKCINLSYCSQISDKGLKALTQQCRQLQAINVSHCERI 212
Query: 165 TENGL 169
+ G
Sbjct: 213 SGVGF 217
>Medtr8g028140.2 | F-box/LRR protein | HC | chr8:10472875-10471688 |
20130731
Length = 395
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 101 NLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGGTF-ITDESLFAIARSCPKLETIVLW 159
+L S+SL G T + D G+ +L+S +LQ LN+ +T+ L +A CP L TI L+
Sbjct: 96 HLESLSLCGCTELDDSGLTRLLSYGSNLQKLNLDCCLKVTNYGLSLVASGCPSLTTISLY 155
Query: 160 SCRHVTENGLIALVDNCLKLKSMNL 184
C +T+ GL L CL LK +NL
Sbjct: 156 RCLIITDEGLETLTTACLSLKCINL 180
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
Query: 47 QNLSFAGW-KMDDDSTARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSI 105
++LS G ++DD RL+S+ NL+KL++ ++T+ GL + A +LT+I
Sbjct: 98 ESLSLCGCTELDDSGLTRLLSYGSNLQKLNLD---CCLKVTNYGLSLV--ASGCPSLTTI 152
Query: 106 SLWGLTGITDEGVVQLISRTRSLQHLNVG-GTFITDESLFAIARSCPKLETIVLWSCRHV 164
SL+ ITDEG+ L + SL+ +N+ + I+D+ L A+ + C +L+ I + C +
Sbjct: 153 SLYRCLIITDEGLETLTTACLSLKCINLSYCSQISDKGLKALTQQCRQLQAINVSHCERI 212
Query: 165 TENGL 169
+ G
Sbjct: 213 SGVGF 217
>Medtr8g037780.1 | F-box/LRR protein, putative | LC |
chr8:14004677-14002273 | 20130731
Length = 592
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 93 ISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNV--------GGTF------- 137
I FA NL + L IT+EG+ L+ R ++HLN+ G F
Sbjct: 430 IMFAALFPNLQQLHLSRSFNITEEGIRPLLESCRKIRHLNLTCLSLKSLGTNFDLPDLEV 489
Query: 138 -------ITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWG 186
+ DE+L+ I+ CP L +VL C ++T+ G++ +V+NC +L+ ++L G
Sbjct: 490 LNLTNTEVDDEALYIISNRCPALWQLVLLRCDYITDKGVMHVVNNCTQLREISLNG 545
>Medtr3g088895.2 | F-box SKP2A-like protein | HC |
chr3:40692425-40696084 | 20130731
Length = 368
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 59/232 (25%)
Query: 7 LPIDLLAHIFGLFTSFTDLAQSSSVCKKWKQGVKESLAR------KQNLS---------F 51
+P++LL I L T + + S VC+ W+ + LAR +N++ F
Sbjct: 42 IPVELLMQILSLVDDQT-VIRVSGVCRGWRDSIYFGLARLSLSWCNKNMNNLVLSLVPKF 100
Query: 52 AGW----------KMDDDSTARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVIN 101
A ++DD+ + + ++L+ LD+ +S ++TD L I+ +
Sbjct: 101 AKLQTLILRQDKPQLDDNVVGTIANFCHDLQILDLSKSF---KLTDRSLYAIAHG--CRD 155
Query: 102 LTSISLWGLTGITDEGVVQLISRTRSLQHLNVGGTF------------------------ 137
LT +++ G + +D + L R L+ LN+ G
Sbjct: 156 LTKLNISGCSAFSDNALAYLAGFCRKLKVLNLCGCVRAASDTALQAIGHYCNQLQSLNLG 215
Query: 138 ----ITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLW 185
+ D + ++A CP L T+ L C ++T++ +IAL + C L+S+ L+
Sbjct: 216 WCDKVGDVGVMSLAYGCPDLRTVDLCGCVYITDDSVIALANGCPHLRSLGLY 267
>Medtr3g088895.1 | F-box SKP2A-like protein | HC |
chr3:40692425-40696084 | 20130731
Length = 368
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 59/232 (25%)
Query: 7 LPIDLLAHIFGLFTSFTDLAQSSSVCKKWKQGVKESLAR------KQNLS---------F 51
+P++LL I L T + + S VC+ W+ + LAR +N++ F
Sbjct: 42 IPVELLMQILSLVDDQT-VIRVSGVCRGWRDSIYFGLARLSLSWCNKNMNNLVLSLVPKF 100
Query: 52 AGW----------KMDDDSTARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVIN 101
A ++DD+ + + ++L+ LD+ +S ++TD L I+ +
Sbjct: 101 AKLQTLILRQDKPQLDDNVVGTIANFCHDLQILDLSKSF---KLTDRSLYAIAHG--CRD 155
Query: 102 LTSISLWGLTGITDEGVVQLISRTRSLQHLNVGGTF------------------------ 137
LT +++ G + +D + L R L+ LN+ G
Sbjct: 156 LTKLNISGCSAFSDNALAYLAGFCRKLKVLNLCGCVRAASDTALQAIGHYCNQLQSLNLG 215
Query: 138 ----ITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLW 185
+ D + ++A CP L T+ L C ++T++ +IAL + C L+S+ L+
Sbjct: 216 WCDKVGDVGVMSLAYGCPDLRTVDLCGCVYITDDSVIALANGCPHLRSLGLY 267
>Medtr3g074550.1 | F-box/RNI superfamily protein | LC |
chr3:33707638-33709267 | 20130731
Length = 376
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 128 LQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL-WG 186
L+ LN+ + I D +L+AI++SCP+L + L C HVTE G+ ++D C+ L+ +NL +
Sbjct: 288 LEVLNLSDSRIDDGALYAISKSCPRLLHLDLEGCHHVTEKGVRLVLDKCIHLRELNLEYC 347
Query: 187 TRVPVDCLSNLLLASQTLQ 205
+V D ++ ++L +L+
Sbjct: 348 RKVSADTVAKMILLRPSLR 366
>Medtr1g069090.1 | F-box/LRR protein | LC | chr1:29657573-29659225 |
20130731
Length = 288
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 93 ISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGGTFITDESLFAIARSCPK 152
I FA NL + L +++E + Q++ ++HLN+ T + D++L I+ SC
Sbjct: 153 ILFASIFPNLEVLDLSYWKDVSEETISQVLKCCSKIKHLNLSYTKVDDKALHIISTSCCG 212
Query: 153 LETIVLWSCRHVTENGLIALVDNCLKLKSMNL-WGTRVPVDCLSNLLLASQTLQ 205
L ++L C +VTENG+ +V NC +L +NL + +V + +S ++L+ +L+
Sbjct: 213 LLQLLLECCTNVTENGVKHVVQNCTQLTEINLRYCDQVKANVVSLMVLSRPSLR 266
>Medtr8g076010.1 | RNI superfamily protein, putative | LC |
chr8:32152390-32151059 | 20130731
Length = 443
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 43/200 (21%)
Query: 36 KQGVKESLARKQNL---SFAGWKM---DDDSTARLVSHAYNLKKLDIPRSRWGCQITDAG 89
K G+ SL + L SF+G D D +A+L K L++ + W
Sbjct: 231 KPGIAHSLRDRSTLRSFSFSGLNFKWEDCDVSAQL-------KFLEVTCNSW----LTYD 279
Query: 90 LIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGG-------------- 135
I++ FA NL + L I++EG+ Q++ R ++HLN G
Sbjct: 280 NIKM-FASIFPNLQLLDLRCCHNISEEGICQVL-RCSEIRHLNFTGCLHVKLRGMNFEVS 337
Query: 136 ---------TFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWG 186
T DE+L+ I++SC L ++L SC++VTE G+ + NC++L+ +NL G
Sbjct: 338 NLEVLNLSCTRFDDETLYVISKSCSGLLQLLLVSCKYVTEKGVKHVRKNCIQLREINLRG 397
Query: 187 T-RVPVDCLSNLLLASQTLQ 205
+V D + ++ + +L+
Sbjct: 398 CDQVHADIVDKMVFSRPSLR 417
>Medtr5g075860.1 | F-box/LRR protein | LC | chr5:32268933-32267230 |
20130731
Length = 567
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 58 DDSTARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSISLWGLTGITDEG 117
D+ L S NL+ LD+ C+I++ G+++ F + N+ ++L + + E
Sbjct: 401 DEYITMLASIFSNLQLLDLSNC---CRISEEGIVQ--FLRICCNIRHLNLSQCSTVKLEM 455
Query: 118 VVQLISRTRSLQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCL 177
++ L+ LN+ T + DE+L+ I++SC L + L +C +T+ G+ +V+NC
Sbjct: 456 NFEV----PKLEVLNLSQTIVDDEALYMISKSCCGLLKLSLKNCNDITKKGVKHVVENCT 511
Query: 178 KLKSMNLWG-TRVPVDCLSNLLLASQTLQ 205
+L+ +N +G +V D +S+++ + +L+
Sbjct: 512 QLRKINFYGCQKVHADFVSSMVSSRPSLR 540
>Medtr2g104970.1 | F-box/RNI superfamily protein | LC |
chr2:45244854-45245426 | 20130731
Length = 172
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 23/113 (20%)
Query: 95 FAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNV--------------------- 133
A C +L + L L GIT EG+ ++ R +++HLN+
Sbjct: 12 IADCFPDLQVLDLNNLYGITGEGMCHVLRRCCNIRHLNLVCCSRLELRGINFEVPKLEVL 71
Query: 134 --GGTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL 184
T + DE+L I++SC L ++L C HVT+ G+ +V+NC +L +NL
Sbjct: 72 NLSETMVDDETLHVISKSCRGLLQLLLKKCYHVTDKGVKHVVENCTQLTEINL 124
>Medtr4g094932.1 | F-box protein SKIP2 | HC | chr4:39315059-39312725
| 20130731
Length = 536
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 84 QITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGG---TFITD 140
Q++D GL+ IS KC + L ++ L +D G+V + R R L+ L++ G I D
Sbjct: 278 QVSDVGLVGIS--KC-LKLETLHLVKTPECSDHGLVVIAERCRMLKKLHIDGWRTNRIGD 334
Query: 141 ESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWG----TRVPVDCLSN 196
E L ++AR+CP L+ +VL + + T L A+ CL L+ L G T ++C+++
Sbjct: 335 EGLVSVARNCPNLQELVLIA-MYPTSLSLGAIASCCLGLERFALCGIGTVTDADIECIAS 393
Query: 197 LLLASQTLQIK 207
+A + L IK
Sbjct: 394 KCVALKKLCIK 404
>Medtr4g008340.1 | F-box/RNI superfamily protein, putative | LC |
chr4:1495274-1496260 | 20130731
Length = 328
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 27/145 (18%)
Query: 84 QITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGG-------- 135
TD LI A C NL ++L I++EG+ ++ R + HL++ G
Sbjct: 162 HYTDLVLI----ADCFPNLEHLALNDCDDISEEGIGHVLRRCCKMTHLDLDGCSNLKMTI 217
Query: 136 --------------TFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKS 181
T + D++LF I+++C + +L +C +TE G+ +V+NC +L+
Sbjct: 218 HFEVPNLKVLDLSMTKVNDDALFVISKNCRGILQQLLENCHDITEKGVRHVVENCAQLQE 277
Query: 182 MNLWG-TRVPVDCLSNLLLASQTLQ 205
+NL + V D L +L+L+ +L+
Sbjct: 278 INLRNCSNVNSDVLVSLILSRPSLK 302
>Medtr2g007590.1 | F-box/LRR protein, putative | LC |
chr2:1036018-1037981 | 20130731
Length = 589
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 23/117 (19%)
Query: 93 ISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVG------------------ 134
I FA NL + L I++EG+ +++ R ++HLN+
Sbjct: 435 ILFASIFPNLQFLDLSSCHNISEEGICEVLRRCCKVRHLNLAYYSRVKLLRINFKVPELE 494
Query: 135 -----GTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWG 186
T + DE+L+ I+++C L + L +C VTENG+ +V+NC +L+ ++L G
Sbjct: 495 VFNLSHTCVDDETLYMISKNCCGLLQLFLENCDEVTENGVKHVVENCTQLREVDLGG 551
>Medtr4g133640.1 | F-box/LRR protein, putative | LC |
chr4:55907276-55909075 | 20130731
Length = 599
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 23/117 (19%)
Query: 93 ISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVG------------------ 134
I FA NL + L I++EG+ +++ R ++HLN+
Sbjct: 435 ILFASIFPNLQFLDLSSCHNISEEGICEVLRRCCKVRHLNLAYCSRVKLLRINFKVPELE 494
Query: 135 -----GTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWG 186
T + DE+L+ I+++C L + L +C VTENG+ +V+NC +L+ ++L G
Sbjct: 495 VFNLSHTCVDDETLYMISKNCCGLLQLFLENCDEVTENGVKHVVENCTQLREVDLGG 551
>Medtr6g016740.1 | F-box/LRR protein, putative | LC |
chr6:6424338-6423056 | 20130731
Length = 383
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 91 IRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNV------GGTFITDESLF 144
I I FA NL + L G I D G+ ++ + R L+HLN+ T ++D++L+
Sbjct: 264 IIIMFASIFPNLKLLDLKGCHQIFD-GICHVLRKCRELKHLNLLEVLNLSNTRVSDKTLY 322
Query: 145 AIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWGTRV 189
AI++SC + ++L C +VT GL +V NC +L+ + L V
Sbjct: 323 AISKSCCGILQLLLEDCDYVTNKGLKRVVLNCTQLREIYLGDFHV 367
>Medtr4g019320.1 | F-box/LRR protein | HC | chr4:6007909-6006085 |
20130731
Length = 560
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 95 FAKCVINLTSISLWGLTGITDEGVVQLISR----TRSLQHLNVGGTFITDESLFAIARSC 150
FA NL + L I+DEGV Q++ + L+ LN+ + I D SL+ I+ SC
Sbjct: 419 FASVCPNLQLLDLSSCEYISDEGVAQVLRKCNFKVSMLEMLNLSHSGIDDRSLYVISMSC 478
Query: 151 PKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL 184
L + L C VT+ G++ +V+NC +L+ +NL
Sbjct: 479 FGLLQLDLGRCYDVTKKGVMQVVENCKQLREINL 512
>Medtr4g008400.1 | F-box/RNI superfamily protein, putative | LC |
chr4:1516935-1517840 | 20130731
Length = 301
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 24/137 (17%)
Query: 93 ISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGG----------------- 135
I C NL ++L I++EG+ ++ R + HL++ G
Sbjct: 139 ILIVDCFPNLEHLALNDCDDISEEGIDHVLRRCCKMTHLDLFGCSNLKMMILFEVPQLKV 198
Query: 136 -----TFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWGTRVP 190
T + D++LF I+++C + ++L +C VTE G+ +V+NC +L+ +NL +
Sbjct: 199 LNLSMTRVNDDALFVISKNCRGILKLLLENCHDVTEKGVRHVVENCAQLQKINLRNCSII 258
Query: 191 V--DCLSNLLLASQTLQ 205
V D L +L+L+ +L+
Sbjct: 259 VNSDVLVSLILSRPSLK 275
>Medtr1g115380.1 | F-box/LRR protein | LC | chr1:52085675-52082333 |
20130731
Length = 569
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 56 MDDDSTARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCV-INLTSISLWGLTGIT 114
+ ++S L S NL+ LD+ C I+D + + + K + +++ S S L +
Sbjct: 399 LKNESIKMLASLFPNLQVLDLRYCHCYC-ISDGIVEVLRYCKIIHLDMRSCSTLNLLSMN 457
Query: 115 DEGVVQLISRTRSLQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVD 174
+ L+ LN+ T I DE+L+ I++SC + + L C H+TE G+ +V+
Sbjct: 458 FQ--------VSKLEVLNLSKTKIDDETLYVISKSCCGILQLDLERCDHITEKGVGHVVE 509
Query: 175 NCLKLKSMNLW 185
NC +L+ +NLW
Sbjct: 510 NCTRLREINLW 520
>Medtr1g029500.1 | F-box SKP2A-like protein | HC |
chr1:10133328-10130817 | 20130731
Length = 352
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 59/239 (24%)
Query: 7 LPIDLLAHIFGLFTSFTDLAQSSSVCKKWKQGVKESLAR------KQN-----LSFAG-- 53
+P++LL I L + +S VC W+ + +L R ++N LS A
Sbjct: 29 IPVELLMQILSLLDDQM-VITASHVCHGWRDSISFALTRLSLSWCRKNMNNLVLSLAPKF 87
Query: 54 ------------WKMDDDSTARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVIN 101
+++D++ + +L+ LD+ +S ++TD L I+ +
Sbjct: 88 TKLQTLILRQDTPQLEDNAVEAVAQFCRDLQILDLSKSF---KLTDRSLYAIALG--CSD 142
Query: 102 LTSISLWGLTGITDEGVVQLISRTRSLQHLNVGGTF------------------------ 137
LT +++ G + +D+ + L S R L+ LN+ G
Sbjct: 143 LTKLNISGCSSFSDKALSYLASLCRKLKILNLCGCVKAVSDTALQAIGHHCNQLQSLNLG 202
Query: 138 ----ITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWGTRVPVD 192
++D + ++A CP L T+ L C +T++ +IAL D C LKS+ L+ + D
Sbjct: 203 WCEQVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIALADRCPHLKSLGLYYCKNITD 261
>Medtr4g114640.1 | EIN3-binding F-box-like protein | HC |
chr4:47161796-47165070 | 20130731
Length = 633
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 28/205 (13%)
Query: 4 IDRLPIDLLAHIFGLFTSFTDLAQSSSVCKKW------------KQGVK--ESLARKQNL 49
I+ LP + L IF S + + + V K+W GV+ S +++
Sbjct: 61 IESLPDECLFEIFRRLPSGKERSSGACVSKRWLMLMSSIRKDEIDSGVETISSDESEEDA 120
Query: 50 SFAGW-----KMDDDSTARLVSHAYN------LKKLDIPRSRWGCQITDAGLIRISFAKC 98
GW + + RL + A L KL I + +TD GL ++
Sbjct: 121 KGGGWLTRRLEGRKATDVRLAAIAVGTGCCGGLGKLYIRGNNSTRGVTDRGLSAVACG-- 178
Query: 99 VINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVG-GTFITDESLFAIARSCPKLETIV 157
+L S+SLW ++ I D+G+ ++ L+ L++ + IT++ L AIA CP L T+
Sbjct: 179 CPSLRSLSLWNVSSIGDKGLCEIAKGCHMLETLDLSHSSSITNKGLIAIAEGCPNLTTLN 238
Query: 158 LWSCRHVTENGLIALVDNCLKLKSM 182
+ SC + GL + C KL S+
Sbjct: 239 IESCSMIGNEGLQTVAKLCPKLHSI 263
>Medtr1g054625.2 | F-box/LRR protein | HC | chr1:23749689-23744056 |
20130731
Length = 254
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 82/141 (58%), Gaps = 9/141 (6%)
Query: 48 NLSFAGWKMDDDSTARLVSHAY-NLKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSIS 106
+L+ +G K D +LV+ Y L+ L++ R ++TDAGL + KC ++L S++
Sbjct: 68 DLNISGCKNISDRGVQLVADNYPKLESLNLTRCV---KLTDAGLKEL-LQKC-LSLQSLN 122
Query: 107 LWGLTGITDEGVVQLISRTRSLQHLNV-GGTFITDESLFAIARSCPKLETIVLWSCRHVT 165
L+ ++ TDE ++ TR L L++ G ++D+ L +I++ C L ++ L C VT
Sbjct: 123 LYAVSSFTDEAYRKICLLTR-LTFLDLCGAQNLSDQGLQSISK-CKNLVSLNLTWCVRVT 180
Query: 166 ENGLIALVDNCLKLKSMNLWG 186
+ G+IA+ +C L+ ++L+G
Sbjct: 181 DEGVIAIAQSCTSLEFLSLFG 201
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 83 CQ-ITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGGT-FITD 140
CQ I+D G+ I+ C L + S++ +TD G++ + + LN+ G I+D
Sbjct: 22 CQKISDTGIEAIT--SCCPQLKTFSVYWNVRVTDTGLLHTARNCKHIVDLNISGCKNISD 79
Query: 141 ESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWGTRVPVD 192
+ +A + PKLE++ L C +T+ GL L+ CL L+S+NL+ D
Sbjct: 80 RGVQLVADNYPKLESLNLTRCVKLTDAGLKELLQKCLSLQSLNLYAVSSFTD 131
>Medtr4g021765.1 | F-box/LRR protein | LC | chr4:7225211-7226221 |
20130731
Length = 336
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 28/141 (19%)
Query: 71 LKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQH 130
LK L + +RW +T+ + +FA NL + L + +EGV Q++ R ++H
Sbjct: 158 LKSLSLVSNRW---LTNENME--AFASSFPNLELLDLSSSHNMYEEGVCQVLRRCCKIRH 212
Query: 131 LNVG-----------------------GTFITDESLFAIARSCPKLETIVLWSCRHVTEN 167
LN+ T + D+ L I++SC L ++L SC VTE
Sbjct: 213 LNLSYCPRVKLRNMNFEVLELEVLNLSHTRVDDKGLRVISKSCCGLLQLLLESCFEVTEK 272
Query: 168 GLIALVDNCLKLKSMNLWGTR 188
GL +V+NC +L+ +NL R
Sbjct: 273 GLKHVVENCKQLREINLKNCR 293
>Medtr2g103530.1 | RNI superfamily protein, putative | LC |
chr2:44575076-44575872 | 20130731
Length = 202
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 131 LNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWG-TRV 189
+N+ T + D++L+ I++SCPKL + L C +VT+ GL +V+NC + + +NL V
Sbjct: 89 VNLSKTRVDDDTLYVISKSCPKLLQLDLAHCHYVTDKGLNHVVENCTQPRELNLRNCDNV 148
Query: 190 PVDCLSNLLLASQTLQ 205
D L++L+L+ +L+
Sbjct: 149 HRDVLASLILSRPSLR 164
>Medtr1g054625.1 | F-box/LRR protein | HC | chr1:23749689-23744064 |
20130731
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 82/141 (58%), Gaps = 9/141 (6%)
Query: 48 NLSFAGWKMDDDSTARLVSHAY-NLKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSIS 106
+L+ +G K D +LV+ Y L+ L++ R ++TDAGL + KC ++L S++
Sbjct: 165 DLNISGCKNISDRGVQLVADNYPKLESLNLTRC---VKLTDAGLKEL-LQKC-LSLQSLN 219
Query: 107 LWGLTGITDEGVVQLISRTRSLQHLNV-GGTFITDESLFAIARSCPKLETIVLWSCRHVT 165
L+ ++ TDE ++ TR L L++ G ++D+ L +I++ C L ++ L C VT
Sbjct: 220 LYAVSSFTDEAYRKICLLTR-LTFLDLCGAQNLSDQGLQSISK-CKNLVSLNLTWCVRVT 277
Query: 166 ENGLIALVDNCLKLKSMNLWG 186
+ G+IA+ +C L+ ++L+G
Sbjct: 278 DEGVIAIAQSCTSLEFLSLFG 298
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 83 CQ-ITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGGT-FITD 140
CQ I+D G+ I+ C L + S++ +TD G++ + + LN+ G I+D
Sbjct: 119 CQKISDTGIEAIT--SCCPQLKTFSVYWNVRVTDTGLLHTARNCKHIVDLNISGCKNISD 176
Query: 141 ESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWG 186
+ +A + PKLE++ L C +T+ GL L+ CL L+S+NL+
Sbjct: 177 RGVQLVADNYPKLESLNLTRCVKLTDAGLKELLQKCLSLQSLNLYA 222
>Medtr5g088250.1 | F-box/LRR protein | LC | chr5:38264630-38267900 |
20130731
Length = 548
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 23/115 (20%)
Query: 93 ISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGG----------------- 135
I +A +L ++L + ITD+ V Q++ R R ++HLN+
Sbjct: 385 ILYASIFPSLQFLNLNRCSRITDQSVAQILKRCRKIRHLNLTNCKSFKSLQINFEVPNLE 444
Query: 136 ------TFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL 184
T + D++L+ I+++C L + L C +VTE G++ +V NC KL+ +NL
Sbjct: 445 VLDLTHTRVDDDTLYVISKTCRGLLKLSLQLCTNVTEKGVMHVVKNCTKLREINL 499
>Medtr4g006280.1 | transmembrane protein, putative | LC |
chr4:566984-566031 | 20130731
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 23/114 (20%)
Query: 96 AKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNV---------GGTF--------- 137
A C NL ++L G +G++DEG+ ++ ++ HLN+ G F
Sbjct: 186 ANCFPNLQQLNLTGCSGMSDEGITHVLRICCNITHLNLSSCRNVKLRGMNFEVLKLETLD 245
Query: 138 -----ITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWG 186
+ DE+L+ I++ C L + L ++VTE G+ LV+NC +L+ + L G
Sbjct: 246 LSCSSVDDETLYVISKYCRGLLQLSLQYNQNVTEKGVKHLVENCTQLREIKLEG 299
>Medtr3g110148.1 | RNI superfamily protein | LC |
chr3:51112873-51114119 | 20130731
Length = 381
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 30/159 (18%)
Query: 71 LKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQH 130
LK L + + W + D +I I A NL + L I+ EG+ Q++ R ++H
Sbjct: 204 LKSLQLDHNPW---LRDESIIMI--ASIFPNLQLLDLTHCYEIS-EGICQVLKRCCKIRH 257
Query: 131 L-----------------------NVGGTFITDESLFAIARSCPKLETIVLWSCRHVTEN 167
L ++ T + DE+L+ I++SC L ++L +C HVTE
Sbjct: 258 LKLAYCSKLKLLGMNFEAPKLEVLDLSNTMVDDETLYVISKSCCGLLQLLLKNCYHVTEK 317
Query: 168 GLIALVDNCLKLKSMNLWGT-RVPVDCLSNLLLASQTLQ 205
G+ +V+ C KL+ +NL G +V + +++++ + +L+
Sbjct: 318 GVKHVVEKCTKLREINLKGCFKVHANFVASMIFSRPSLR 356
>Medtr1g012520.1 | EIN3-binding F-box-like protein | HC |
chr1:2502649-2506197 | 20130731
Length = 643
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 71 LKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQH 130
L KL I S +T GL + A +L S SLW ++ + DEG++++ + + L+
Sbjct: 162 LGKLSIRGSNSERGVTTLGLKAV--ASGCPSLKSFSLWNVSSVGDEGLIEIANGCQKLEK 219
Query: 131 LNVGG-TFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL 184
L++ I+D++L +A+ CP L + L SC + GL A+ C LK++++
Sbjct: 220 LDLCKCPAISDKALITVAKKCPNLTELSLESCPSIRNEGLQAIGKFCPNLKAISI 274
>Medtr7g007780.3 | armadillo/beta-catenin repeat protein | HC |
chr7:1672392-1663844 | 20130731
Length = 707
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 7 LPIDLLAHIFGLFTSFTDLAQSSSVCKKWKQGVKESLARKQNLSFAGWKMDDDSTARLVS 66
LP D + + S+ D A S+ CK W+ + S +L K D + A L S
Sbjct: 42 LPDDTVIQLLSCL-SYRDRASLSATCKTWRV-LGNSPCLWSSLDLRSHKFDANVAASLAS 99
Query: 67 HAYNLKKLDIPRSRWGCQITDAGL-IRISFAKCVINLTSISLWGLTGITDEGVVQLISRT 125
+L+KL R R G DA L +R NL IS G +TD + +++R
Sbjct: 100 RCVHLQKL---RFR-GADSADALLYLRAK------NLCEISGDGCRKMTDATLAVVVARH 149
Query: 126 RSLQHLNVGGTF---ITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSM 182
L+ L +G F +T +++ AIA CP L + L R V + + AL + C KL +
Sbjct: 150 ELLESLVLGPDFCDKVTSDAIRAIAHCCPSLMKLRLSGIRDVNADAINALANYCPKLTDI 209
Query: 183 NLWGTRVPVDCLS 195
+DCLS
Sbjct: 210 GF------IDCLS 216
>Medtr7g007780.2 | armadillo/beta-catenin repeat protein | HC |
chr7:1672392-1659373 | 20130731
Length = 917
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 7 LPIDLLAHIFGLFTSFTDLAQSSSVCKKWKQGVKESLARKQNLSFAGWKMDDDSTARLVS 66
LP D + + S+ D A S+ CK W+ + S +L K D + A L S
Sbjct: 42 LPDDTVIQLLSCL-SYRDRASLSATCKTWRV-LGNSPCLWSSLDLRSHKFDANVAASLAS 99
Query: 67 HAYNLKKLDIPRSRWGCQITDAGL-IRISFAKCVINLTSISLWGLTGITDEGVVQLISRT 125
+L+KL R R G DA L +R NL IS G +TD + +++R
Sbjct: 100 RCVHLQKL---RFR-GADSADALLYLRAK------NLCEISGDGCRKMTDATLAVVVARH 149
Query: 126 RSLQHLNVGGTF---ITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSM 182
L+ L +G F +T +++ AIA CP L + L R V + + AL + C KL +
Sbjct: 150 ELLESLVLGPDFCDKVTSDAIRAIAHCCPSLMKLRLSGIRDVNADAINALANYCPKLTDI 209
Query: 183 NLWGTRVPVDCLS 195
+DCLS
Sbjct: 210 GF------IDCLS 216
>Medtr7g007780.1 | armadillo/beta-catenin repeat protein | HC |
chr7:1672392-1659373 | 20130731
Length = 917
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 7 LPIDLLAHIFGLFTSFTDLAQSSSVCKKWKQGVKESLARKQNLSFAGWKMDDDSTARLVS 66
LP D + + S+ D A S+ CK W+ + S +L K D + A L S
Sbjct: 42 LPDDTVIQLLSCL-SYRDRASLSATCKTWRV-LGNSPCLWSSLDLRSHKFDANVAASLAS 99
Query: 67 HAYNLKKLDIPRSRWGCQITDAGL-IRISFAKCVINLTSISLWGLTGITDEGVVQLISRT 125
+L+KL R R G DA L +R NL IS G +TD + +++R
Sbjct: 100 RCVHLQKL---RFR-GADSADALLYLRAK------NLCEISGDGCRKMTDATLAVVVARH 149
Query: 126 RSLQHLNVGGTF---ITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSM 182
L+ L +G F +T +++ AIA CP L + L R V + + AL + C KL +
Sbjct: 150 ELLESLVLGPDFCDKVTSDAIRAIAHCCPSLMKLRLSGIRDVNADAINALANYCPKLTDI 209
Query: 183 NLWGTRVPVDCLS 195
+DCLS
Sbjct: 210 GF------IDCLS 216
>Medtr4g024200.1 | F-box/RNI superfamily protein | LC |
chr4:8186005-8187423 | 20130731
Length = 472
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 16/150 (10%)
Query: 38 GVKESLARKQNLSFAGWKMDDDSTARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAK 97
GV+ L + +L + W + +++ L S NL+ LD+ I++ G+ ++
Sbjct: 291 GVRPQL-KSLSLIYNCW-LSNENLEMLSSLFPNLQLLDLSHCY---DISEEGICQVLKRC 345
Query: 98 CVI---NLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGGTFITDESLFAIARSCPKLE 154
C I NL GL+G+ E IS+ L+ LN+ T + D++L+AI++SC L
Sbjct: 346 CEIRDLNLAYCPRVGLSGMNFE-----ISK---LEVLNLSHTRVDDKTLYAISKSCCGLL 397
Query: 155 TIVLWSCRHVTENGLIALVDNCLKLKSMNL 184
++L +CR+VT G++ +V NC +L +NL
Sbjct: 398 QLLLENCRNVTGKGVMDVVKNCTQLTEVNL 427
>Medtr3g107280.1 | EIN3-binding F-box-like protein | HC |
chr3:49486587-49482963 | 20130731
Length = 641
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 71 LKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQH 130
L KL I S +TD GL ++ +L S +LW + I+D G++++ + +++
Sbjct: 160 LGKLSIHGSNPDRALTDVGLKAVAHG--CPSLKSFTLWDVATISDAGLIEIANGCHQIEN 217
Query: 131 LNVGG-TFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL 184
L++ I+D++L A+A+ CP L + + SC + GL A+ C L+S+++
Sbjct: 218 LDLCKLPTISDKALIAVAKHCPNLTELSIESCPSIGNEGLHAIGKLCPNLRSVSI 272
>Medtr3g110150.1 | F-box/LRR protein, putative | LC |
chr3:51120353-51121237 | 20130731
Length = 294
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 24/134 (17%)
Query: 96 AKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGG-------------------- 135
A C +L S+ GI ++G+ ++ R +++HLN G
Sbjct: 134 ADCFPDLQSLGFKYCHGICNKGIGCVLWRCCNIRHLNFTGCSRVKLHGMNFEVLKLEVLN 193
Query: 136 ---TFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL-WGTRVPV 191
T + DE L+ I++SC L + L SC +VT+ G+ +V+NC +L+ +NL + +V
Sbjct: 194 LSHTRVDDEKLYVISKSCRGLLQLSLESCLYVTQKGVKHVVENCTQLRVINLRYCYKVHA 253
Query: 192 DCLSNLLLASQTLQ 205
D +++++ + +L+
Sbjct: 254 DFVASIVFSRSSLR 267
>Medtr7g100890.1 | DNA-binding protein S1FA | HC |
chr7:40664231-40661805 | 20130731
Length = 497
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 24/117 (20%)
Query: 90 LIRISFAKCVINLTSISLWGLTGITDE---GVVQLISRTR-------------------S 127
LIRI A NL + L TGI+D+ V++L R
Sbjct: 280 LIRI--ASIFRNLHHLDLSRCTGISDQVIGDVLRLCREIRRLDISNTSITSFHIGFVVLK 337
Query: 128 LQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL 184
LQ LN+ GT DE+L I+ CP L+ ++L +C +++ G+I LV +C KL+ + L
Sbjct: 338 LQQLNISGTAFNDEALMFISDCCPALKVVLLNACNSISDVGVIYLVKSCTKLQKIGL 394
>Medtr6g016915.1 | F-box/RNI superfamily protein | LC |
chr6:6602284-6603474 | 20130731
Length = 396
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 105 ISLWGLTGITDEGVVQLISRTRSLQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHV 164
I+ L TD ++ LQ L++ T + DE+++AI++SCP L ++L C +V
Sbjct: 292 ITHLNLASCTDVNKFKMNFVLPKLQVLDLADTGVDDETVYAISKSCPGLLELLLKYCYYV 351
Query: 165 TENGLIALVDNCLKLKSMNL 184
TE G+ +V+NC +L+ +
Sbjct: 352 TEKGVKHVVENCKQLRKIEF 371
>Medtr4g006240.1 | F-box/LRR protein | LC | chr4:548401-546674 |
20130731
Length = 575
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 58 DDSTARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSISLWGLTGITDEG 117
D+S S NL+ LD+ R + + ++R +NL++ + L G+ E
Sbjct: 410 DESIKMFPSMFPNLQLLDLSYCRNISEDSICDVLRRCCKIRHLNLSNCLVVNLFGMNFE- 468
Query: 118 VVQLISRTRSLQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCL 177
L+ +N+ T + DE+L+ I++SC L ++L C HVTE G+ +++NC
Sbjct: 469 -------VPKLEVVNLSRTIVNDETLYVISKSCCGLLELLLEECFHVTEKGVKHVLENCT 521
Query: 178 KLKSMNLWG-TRVPVDCLSNLLLASQTLQ 205
KL+ +NL +V V+ ++++L +L+
Sbjct: 522 KLREINLRACNKVNVNAVASMLFLRPSLR 550
>Medtr3g081260.1 | F-box/LRR protein, putative | LC |
chr3:36810047-36811365 | 20130731
Length = 254
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%)
Query: 128 LQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWGT 187
L+ LN+ + I + +L+AI++ CP+L + L C +VTE G+ +V+NC+ L+ +NL
Sbjct: 151 LEVLNLSHSRIDNRALYAISKICPRLLQLDLEHCYYVTEKGVRQVVENCIHLREINLRSC 210
Query: 188 R 188
R
Sbjct: 211 R 211
>Medtr5g095830.1 | F-box/LRR protein | LC | chr5:41899987-41902867 |
20130731
Length = 649
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 49 LSFAGWKMDDDSTARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSISLW 108
L+ W D+D T S NL+ LD+ C+I + G++++ C I ++S
Sbjct: 434 LAHNPWLFDEDITM-FASIFPNLQLLDLSNC---CRIFEEGIVQVLRMCCNIRHLNLSKC 489
Query: 109 GLTGITDEGVVQLISRTRSLQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTENG 168
+ + + V L+ LN+ T + DE+L+ I++SC L + L C VT+ G
Sbjct: 490 SIVRLEIDFEVP------KLEVLNLSYTKVDDEALYMISKSCCGLLKLSLQDCNDVTKKG 543
Query: 169 LIALVDNCLKLKSMNLWG 186
+ +V+NC +L+ ++L G
Sbjct: 544 VKHVVENCTQLRKISLNG 561
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 84 QITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNV-GGTFITDES 142
I+D LI I+ + LT + L TG + G++ L+S+ + L+HL++ F+ DE
Sbjct: 305 NISDVFLISIAIQG--LPLTRLVLQNCTGYSYSGIICLLSKCQHLKHLDLENAVFLKDEH 362
Query: 143 LFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWGTRV 189
+ ++ L +I L SC VT + L+ NC L +N+ T +
Sbjct: 363 VVEMSSFLGDLVSINLASCPMVTVSAFFVLLRNCPSLGDINMEDTGI 409
>Medtr6g027420.1 | RNI superfamily protein, putative | LC |
chr6:9412558-9411113 | 20130731
Length = 481
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 30/131 (22%)
Query: 84 QITDAGLIR--------ISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGG 135
Q+ GL+R FA NL + L G I++EG++Q++ R +++HLN+
Sbjct: 303 QLKSLGLVRNWLRDKNIKRFASIFPNLQLLDLSGCCNISNEGILQVLRRCGNIRHLNLAC 362
Query: 136 TFIT----------------------DESLFAIARSCPKLETIVLWSCRHVTENGLIALV 173
T +T DE L+ I+++C L ++L C +V + G++ +V
Sbjct: 363 TCVTLDGLNFEVPKLEVLNLSYTGVFDEILYEISKNCRGLLQLLLQCCHNVRDKGVMHVV 422
Query: 174 DNCLKLKSMNL 184
NCL+LK +NL
Sbjct: 423 GNCLQLKEINL 433
>Medtr6g016905.1 | F-box/LRR protein | LC | chr6:6587907-6589583 |
20130731
Length = 558
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 38/202 (18%)
Query: 14 HIFGLFTSFTDLAQSS-SVCKKWKQGVKESLARKQNL-------SFAGWKMDDDSTARLV 65
H+ L + DL + S C K + +LARK L + G + +S A +
Sbjct: 343 HVVELSSFLGDLVSVNLSNCSKITESALFALARKCPLLGEITMENIRGSVANYESPAYIG 402
Query: 66 SHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRT 125
H LK L + ++ W ++DA +I FA NL + I+ +G+ Q++ R
Sbjct: 403 VHP-QLKSLYLGKNSW---LSDANIIM--FASIFPNLEVLDFNSCNNIS-KGICQVLRRC 455
Query: 126 RSLQHLNVG-----------------------GTFITDESLFAIARSCPKLETIVLWSCR 162
++HLN+ T + D++L+ I+++C L + L C
Sbjct: 456 CKIRHLNLAFCKKVKLLGMNFVVPMLEVLNLSNTNVNDKTLYLISKNCIGLMQLSLQLCN 515
Query: 163 HVTENGLIALVDNCLKLKSMNL 184
+VTE G+ +V+NC +L+ + L
Sbjct: 516 YVTEEGVKHVVENCTRLQEIYL 537
>Medtr4g008490.1 | F-box/RNI superfamily protein | LC |
chr4:1552593-1553117 | 20130731
Length = 174
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 27/121 (22%)
Query: 111 TGITDEGVVQLISRTRSLQHLNVGGTFI------------------------TDESLFAI 146
TGI+DEG+ +++ R ++HLN+ +FI DE+L I
Sbjct: 27 TGISDEGICEVL-RCCKIRHLNLAHSFIEGKLLGLNFEIPKLEVLNLSHTNINDETLNVI 85
Query: 147 ARSCPKLETIVLWSCR-HVTENGLIALVDNCLKLKSMNLWGT-RVPVDCLSNLLLASQTL 204
+++C L ++L C +VTE G+ + +NCL+L+ +NL G +V D +++L+ + +L
Sbjct: 86 SKNCRGLLQLLLEQCNYYVTEKGVKHVGENCLQLREINLKGCLKVDHDVVASLVFSRPSL 145
Query: 205 Q 205
+
Sbjct: 146 R 146
>Medtr7g112570.3 | F-box/LRR protein | HC | chr7:46304993-46309239 |
20130731
Length = 623
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 85 ITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVG-GTFITDESL 143
+T+ GL +I + C++ L + L +G+ D + + +SR L L +G T I+D L
Sbjct: 427 VTEIGLYQIG-SSCLM-LEELDLTDCSGVNDIAL-KYLSRCSKLVRLKLGLCTNISDIGL 483
Query: 144 FAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL-WGTRVP---VDCLSNL 197
IA +CPKL + L+ C + ++GL AL C KL +NL + R+ + C+SNL
Sbjct: 484 AHIACNCPKLTELDLYRCVRIGDDGLAALTTGCNKLAMLNLAYCNRITDAGLKCISNL 541
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 61 TARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQ 120
+A L + NLK L + R G +++D +++I + C +L + L G+T+ G++Q
Sbjct: 327 SAPLTNGLKNLKHLSVIRID-GVRVSDF-ILQIIGSNCK-SLVELGLSKCIGVTNMGIMQ 383
Query: 121 LISRTRSLQHLNVGGT-FITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKL 179
++ +L L++ F+TD ++ IA SCP L + L SC VTE GL + +CL L
Sbjct: 384 VVGCC-NLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLML 442
Query: 180 KSMNL 184
+ ++L
Sbjct: 443 EELDL 447
>Medtr7g112570.2 | F-box/LRR protein | HC | chr7:46304993-46309996 |
20130731
Length = 605
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 8/119 (6%)
Query: 84 QITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVG-GTFITDES 142
+T+ GL +I + C++ L + L +G+ D + + +SR L L +G T I+D
Sbjct: 426 MVTEIGLYQIG-SSCLM-LEELDLTDCSGVNDIAL-KYLSRCSKLVRLKLGLCTNISDIG 482
Query: 143 LFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL-WGTRVP---VDCLSNL 197
L IA +CPKL + L+ C + ++GL AL C KL +NL + R+ + C+SNL
Sbjct: 483 LAHIACNCPKLTELDLYRCVRIGDDGLAALTTGCNKLAMLNLAYCNRITDAGLKCISNL 541
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 61 TARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQ 120
+A L + NLK L + R G +++D +++I + C +L + L G+T+ G++Q
Sbjct: 327 SAPLTNGLKNLKHLSVIRID-GVRVSDF-ILQIIGSNCK-SLVELGLSKCIGVTNMGIMQ 383
Query: 121 LISRTRSLQHLNVGGT-FITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKL 179
++ +L L++ F+TD ++ IA SCP L + L SC VTE GL + +CL L
Sbjct: 384 VVGCC-NLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLML 442
Query: 180 KSMNL 184
+ ++L
Sbjct: 443 EELDL 447
>Medtr7g112570.1 | F-box/LRR protein | HC | chr7:46304931-46310023 |
20130731
Length = 679
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 85 ITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVG-GTFITDESL 143
+T+ GL +I + C++ L + L +G+ D + + +SR L L +G T I+D L
Sbjct: 427 VTEIGLYQIG-SSCLM-LEELDLTDCSGVNDIAL-KYLSRCSKLVRLKLGLCTNISDIGL 483
Query: 144 FAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL-WGTRVP---VDCLSNL 197
IA +CPKL + L+ C + ++GL AL C KL +NL + R+ + C+SNL
Sbjct: 484 AHIACNCPKLTELDLYRCVRIGDDGLAALTTGCNKLAMLNLAYCNRITDAGLKCISNL 541
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 61 TARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQ 120
+A L + NLK L + R G +++D +++I + C +L + L G+T+ G++Q
Sbjct: 327 SAPLTNGLKNLKHLSVIRID-GVRVSDF-ILQIIGSNCK-SLVELGLSKCIGVTNMGIMQ 383
Query: 121 LISRTRSLQHLNVGGT-FITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKL 179
++ +L L++ F+TD ++ IA SCP L + L SC VTE GL + +CL L
Sbjct: 384 VVGCC-NLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLML 442
Query: 180 KSMNL 184
+ ++L
Sbjct: 443 EELDL 447
>Medtr4g006450.1 | F-box/LRR protein | LC | chr4:642402-640670 |
20130731
Length = 562
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 40 KESLARKQNLSFAGWKMDDDSTARLVSHAYNLKKLDIPRSRWGCQITDAGLIRISFAKCV 99
KESL + +L+ W + D++ S NL+ LD+ C G+ ++ C
Sbjct: 380 KESL-KCLHLAHNFW-LRDENIIMFASMFPNLRLLDLS----DCDHVSEGIFQVLRICC- 432
Query: 100 INLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGGTFITDESLFAIARSCPKLETIVLW 159
N+ ++L G G+ ++ + L+ LN+ T + DE+L+ +++C L ++L
Sbjct: 433 -NVRHLNLAGCDGV---NLLGMKFELPILEVLNLSDTNVDDETLYVTSKNCRGLLHLLLE 488
Query: 160 SCRHVTENGLIALVDNCLKLKSMNLWG-TRVPVDCLSNLLLASQTLQ 205
C +VT+ G+ +V+NC +L+ +NL G +V + + +++ + +L+
Sbjct: 489 DCHYVTKKGVNHVVENCKELREVNLKGCNKVNANVVDSMVFSRPSLR 535
>Medtr6g042905.1 | F-box/RNI superfamily protein | LC |
chr6:14821809-14820532 | 20130731
Length = 425
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 56 MDDDSTARLVSHAYNLKKLDI---PRSRWGCQITDAGLIRISFAKCVINLTSISLWGLTG 112
++D+ S NLK LD+ P S CQ KC L ++L +G
Sbjct: 286 LNDEIIILYASIFPNLKLLDLQDSPISEGICQ---------GLRKCC-KLKHLNLEFCSG 335
Query: 113 ITDEGVVQLISRTRSLQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIAL 172
+ G+ + + L+ LN+ T + +E+L+ I+++C L ++L C VTE G+ +
Sbjct: 336 VKLHGINFAVPK---LEVLNLSNTKVDNETLYMISKNCCGLLRLLLEKCNDVTEKGVKHV 392
Query: 173 VDNCLKLKSMNLWG 186
V NC +L+ +NL G
Sbjct: 393 VKNCTQLREINLAG 406
>Medtr3g006050.1 | F-box/LRR protein, putative | HC |
chr3:513212-515344 | 20130731
Length = 604
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 24/137 (17%)
Query: 93 ISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVG------------------ 134
I FA NL I L I+D+ + Q++ R ++HLN+
Sbjct: 438 IMFASIFPNLQLIDLSYCDNISDKSICQVLKRWSKIRHLNLAHCSRVKLYGMNIRVLKLE 497
Query: 135 -----GTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNLWG-TR 188
T + DE+L I++SC L ++L +C +TE G+ +V NC +L+ +NL G +
Sbjct: 498 VLSLIDTRVDDEALHVISKSCCGLLQLLLQNCEGITETGVKHVVKNCTRLREINLRGCNK 557
Query: 189 VPVDCLSNLLLASQTLQ 205
V + ++ ++ + +L+
Sbjct: 558 VHYNVVAPMVFSRPSLR 574
>Medtr4g009030.1 | F-box/LRR protein | HC | chr4:1743950-1742277 |
20130731
Length = 557
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 24/122 (19%)
Query: 85 ITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVG---------- 134
+ DA LI+ F L + L GIT E V +++ R ++HLN+
Sbjct: 404 LNDASLIK--FTSICAGLQLLDLNACEGITGECVAEVMKRCYVIRHLNIAYTGIEKFEIN 461
Query: 135 ------------GTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSM 182
G I DESL I++ C L + + +C +VT G+ +++NC+ LK +
Sbjct: 462 FEVSQLKVLNLSGARIEDESLSIISKWCSGLMLLDIQNCWYVTAKGVREVIENCIALKEL 521
Query: 183 NL 184
NL
Sbjct: 522 NL 523
>Medtr4g008380.1 | F-box/RNI superfamily protein | LC |
chr4:1508006-1508344 | 20130731
Length = 112
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 125 TRSLQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL 184
T L+ LN+ T + DE+L I++ C L +VL C VTE G+ ++ C +L+ +NL
Sbjct: 5 TPKLEVLNLSHTNVDDETLCVISKCCRGLLQLVLDGCAAVTEMGVKHALEKCTQLREINL 64
Query: 185 -WGTRVPVDCLSNLLLASQTLQ 205
+G +V D L++L+ + +L+
Sbjct: 65 KYGPKVRGDVLASLIFSRPSLR 86
>Medtr4g021835.1 | F-box/RNI superfamily protein | LC |
chr4:7309012-7307621 | 20130731
Length = 463
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 53 GWKMDDDSTARLVSHAYNLKKLDIPRSRW--GCQI----TDAGLIRISFAKCVINLTSIS 106
W +D+ R+ NL++LD+ R R G + T+ G+ + + N + I
Sbjct: 284 SWWKSNDTIKRVPWLFPNLQRLDLSRRRVNSGNEFVFDGTEEGICNL-----LRNCSKIK 338
Query: 107 LWGLTGITDEGVVQLISRTRSLQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTE 166
LT V ++ + L+ LN+ T + DE+L I++SC +L ++L C VT
Sbjct: 339 HLNLTHYPIVMVPKMNFKVPKLEVLNLSYTEVDDEALRMISKSCCRLLHLLLEGCFIVTM 398
Query: 167 NGLIALVDNCLKLKSMNL 184
GL +V+NC +L+ +NL
Sbjct: 399 TGLKHVVENCTQLREINL 416
>Medtr1g114610.1 | F-box/LRR protein | HC | chr1:51737951-51741223 |
20130731
Length = 416
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 85 ITDAGLIRISFAKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVGGT-FITDESL 143
ITD G+ I +++ +S +TD+G+ + L+ L++ G F+TD L
Sbjct: 121 ITDVGMKAIGDGLSLLHSLDVSYC--RKLTDKGLSAVAKGCCDLRILHLTGCRFVTDSIL 178
Query: 144 FAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL 184
A++++C LE +VL C +T+NGL++L C ++K +++
Sbjct: 179 EALSKNCRNLEELVLQGCTSITDNGLMSLASGCQRIKFLDI 219
>Medtr6g080560.1 | RNI superfamily protein, putative | LC |
chr6:28935733-28934831 | 20130731
Length = 300
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 26/115 (22%)
Query: 96 AKCVINLTSISLWGLTGITDEGVVQLISRTRSLQHLNVG--------------------- 134
A C NL S+ L + +EG+V ++ + +++HLN+
Sbjct: 146 ADCFPNLQSLDLNHCDDVCEEGIVYVLMKCLNIRHLNLAYCLGLKLNLNGLMKFDVPQLE 205
Query: 135 -----GTFITDESLFAIARSCPKLETIVLWSCRHVTENGLIALVDNCLKLKSMNL 184
T + DE+L I++SC L ++L +C VT+ G+ +V+NC +L+ + L
Sbjct: 206 VLNLSHTRVDDEALSVISKSCHGLMRLLLLNCDSVTKKGVKHVVENCTQLREIYL 260
>Medtr6g054950.1 | F-box/RNI superfamily protein, putative | LC |
chr6:19633534-19632278 | 20130731
Length = 374
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 18/138 (13%)
Query: 54 WKMDDDSTARLVSHAYNL------KKLDIPRSRWGCQITDAGLIRISFAKCV-INLTSIS 106
WK+ + S LVS+ +L +LD+ R + I++A + K +NLT S
Sbjct: 227 WKLTELSLFSLVSNCPSLSEIKMENRLDLNRCYY---ISNAICQVLRCCKITHLNLTRCS 283
Query: 107 LWGLTGITDEGVVQLISRTRSLQHLNVGGTFITDESLFAIARSCPKLETIVLWSCRHVTE 166
+ L GI L+ + L+ L++ T + DE LF I+++C L ++L +C ++TE
Sbjct: 284 IVNLLGIN-----FLVPK---LEVLDLSYTKVDDEQLFVISKNCCGLLQLLLKNCANITE 335
Query: 167 NGLIALVDNCLKLKSMNL 184
G+ +V+NC +LK + L
Sbjct: 336 KGVKHVVENCKQLKEIYL 353