Miyakogusa Predicted Gene

Lj2g3v1876630.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1876630.1 Non Characterized Hit- tr|F6HHL2|F6HHL2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,27.27,1e-18,RRM_1,RNA recognition motif domain; RRM,RNA
recognition motif domain; CG3594-PA,NULL; FAMILY NOT NAM,CUFF.37999.1
         (369 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g017280.4 | RNA-binding (RRM/RBD/RNP motif) family protein...   593   e-170
Medtr5g017280.2 | RNA-binding (RRM/RBD/RNP motif) family protein...   585   e-167
Medtr5g017280.3 | RNA-binding (RRM/RBD/RNP motif) family protein...   585   e-167
Medtr5g017280.1 | RNA-binding (RRM/RBD/RNP motif) family protein...   585   e-167
Medtr5g097580.2 | RNA-binding (RRM/RBD/RNP motif) family protein...   134   2e-31
Medtr5g097580.1 | RNA-binding (RRM/RBD/RNP motif) family protein...   133   2e-31
Medtr3g055990.1 | heterogeneous nuclear ribonucleoprotein 27C, p...   130   2e-30
Medtr3g055990.2 | heterogeneous nuclear ribonucleoprotein 27C, p...   130   2e-30
Medtr2g026180.2 | RNA-binding (RRM/RBD/RNP motif) family protein...   128   9e-30
Medtr2g026180.3 | RNA-binding (RRM/RBD/RNP motif) family protein...   128   9e-30
Medtr2g026180.1 | RNA-binding (RRM/RBD/RNP motif) family protein...   128   9e-30
Medtr1g073690.2 | RNA-binding (RRM/RBD/RNP motif) family protein...   117   2e-26
Medtr1g073690.1 | RNA-binding (RRM/RBD/RNP motif) family protein...   117   2e-26
Medtr6g004810.1 | RNA-binding (RRM/RBD/RNP motif) family protein...   107   2e-23
Medtr3g103420.1 | RNA-binding (RRM/RBD/RNP motif) family protein...   107   2e-23
Medtr3g082650.1 | RNA recognition motif, a.k.a. RRM, RBD protein...   102   8e-22
Medtr8g463890.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    82   1e-15
Medtr7g118120.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    81   2e-15
Medtr7g118120.3 | RNA recognition motif, a.k.a. RRM, RBD protein...    81   2e-15
Medtr7g118120.2 | RNA recognition motif, a.k.a. RRM, RBD protein...    81   2e-15
Medtr4g088010.1 | heterogeneous nuclear ribonucleoprotein | HC |...    79   7e-15
Medtr4g052940.3 | RNA recognition motif, a.k.a. RRM, RBD protein...    78   2e-14
Medtr4g052940.2 | RNA recognition motif, a.k.a. RRM, RBD protein...    78   2e-14
Medtr4g052940.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    78   2e-14
Medtr7g088140.2 | RNA recognition motif, a.k.a. RRM, RBD protein...    75   1e-13
Medtr7g088140.5 | RNA recognition motif, a.k.a. RRM, RBD protein...    75   1e-13
Medtr7g088140.4 | RNA recognition motif, a.k.a. RRM, RBD protein...    75   1e-13
Medtr7g088140.3 | RNA recognition motif, a.k.a. RRM, RBD protein...    75   1e-13
Medtr7g088140.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    74   2e-13
Medtr4g052940.4 | RNA recognition motif, a.k.a. RRM, RBD protein...    71   2e-12
Medtr2g026180.4 | RNA-binding (RRM/RBD/RNP motif) family protein...    70   3e-12
Medtr5g088220.3 | RNA recognition motif, a.k.a. RRM, RBD protein...    70   4e-12
Medtr5g088220.2 | RNA recognition motif, a.k.a. RRM, RBD protein...    70   4e-12
Medtr5g088220.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    70   4e-12
Medtr3g075500.1 | 31 kDa ribonucleoprotein | HC | chr3:34381451-...    65   7e-11
Medtr7g107580.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    65   1e-10
Medtr7g010360.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    65   1e-10
Medtr1g045510.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    65   1e-10
Medtr7g107580.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    65   2e-10
Medtr7g107580.3 | RNA-binding (RRM/RBD/RNP motif) family protein...    64   2e-10
Medtr7g013730.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    64   3e-10
Medtr7g013730.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    64   3e-10
Medtr4g104470.1 | 31 kDa ribonucleoprotein | HC | chr4:43224367-...    64   3e-10
Medtr3g075500.2 | 31 kDa ribonucleoprotein | HC | chr3:34381440-...    62   7e-10
Medtr1g061870.1 | polyadenylate-binding plant protein, putative ...    62   7e-10
Medtr4g109540.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    60   3e-09
Medtr3g084040.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    60   4e-09
Medtr4g109540.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    59   7e-09
Medtr7g117495.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    59   1e-08
Medtr7g117495.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    58   1e-08
Medtr4g035310.2 | RNA recognition motif, a.k.a. RRM, RBD protein...    58   2e-08
Medtr3g084040.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    58   2e-08
Medtr4g035310.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    58   2e-08
Medtr7g102730.1 | polyadenylate-binding protein | HC | chr7:4165...    57   2e-08
Medtr4g070140.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    57   3e-08
Medtr3g027140.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    56   5e-08
Medtr4g086600.1 | polyadenylate-binding protein RBP47B | HC | ch...    56   5e-08
Medtr2g097960.1 | polyadenylate-binding protein RBP47B | HC | ch...    56   7e-08
Medtr3g092490.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    55   8e-08
Medtr3g092490.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    55   8e-08
Medtr7g013740.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    55   9e-08
Medtr1g019150.1 | polyadenylate-binding protein | HC | chr1:5708...    55   9e-08
Medtr3g101370.1 | polyadenylate-binding protein RBP47C | HC | ch...    55   9e-08
Medtr3g092490.3 | RNA-binding (RRM/RBD/RNP motif) family protein...    55   1e-07
Medtr3g092490.4 | RNA-binding (RRM/RBD/RNP motif) family protein...    55   1e-07
Medtr3g025880.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    55   1e-07
Medtr3g025880.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    55   1e-07
Medtr8g092550.1 | CC1-like splicing factor | HC | chr8:38688579-...    55   1e-07
Medtr5g064120.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    54   2e-07
Medtr4g122650.1 | flowering time control FCA-like protein | HC |...    54   2e-07
Medtr8g024520.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    54   3e-07
Medtr8g024520.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    54   3e-07
Medtr4g070080.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    54   3e-07
Medtr4g070080.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    54   3e-07
Medtr3g080130.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    53   4e-07
Medtr3g116130.2 | RNA-binding (RRM/RBD/RNP motif) family protein...    53   4e-07
Medtr6g040190.1 | polyadenylate-binding protein | LC | chr6:1440...    53   4e-07
Medtr4g070190.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    53   6e-07
Medtr3g116130.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    52   6e-07
Medtr7g094660.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    52   1e-06
Medtr3g095230.1 | CC1-like splicing factor | LC | chr3:43513030-...    51   1e-06
Medtr3g095230.2 | CC1-like splicing factor | LC | chr3:43513031-...    51   1e-06
Medtr3g095230.3 | CC1-like splicing factor | LC | chr3:43513031-...    51   1e-06
Medtr1g056520.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    50   3e-06
Medtr1g056520.2 | RNA recognition motif, a.k.a. RRM, RBD protein...    50   3e-06

>Medtr5g017280.4 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr5:6293125-6298060 | 20130731
          Length = 373

 Score =  593 bits (1530), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 296/381 (77%), Positives = 318/381 (83%), Gaps = 20/381 (5%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           MEQRKLVVLGIPW+VDT+GLKEYMSK+GELEDCIVMKER+TGRSRGFGYVTF SVDDAK 
Sbjct: 1   MEQRKLVVLGIPWDVDTEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTFASVDDAKE 60

Query: 61  VLSIEHNLGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGDITD 120
           VLS EH LG+RMLEVKVATPKEEM+AP KKV RIF+ARIPPSVTE TFRSHFEKYGDITD
Sbjct: 61  VLSGEHVLGDRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEETFRSHFEKYGDITD 120

Query: 121 LYMPKDQRSKTHRGIGFITYANADSVENLMKETHELEGSTVVVDRATPKEDDFKPIXXXX 180
           LYMPKDQ SK HRGIGFIT+ NA+SVENLM ETHEL GS VVVDRATPKEDD KP     
Sbjct: 121 LYMPKDQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKEDDVKPT---- 176

Query: 181 XXXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIFVGHL 240
                         AYNAYIS  TRYAALGAPTLYD+PG +YGRGEP R + KKIFVG L
Sbjct: 177 ----GRMSQGGGYGAYNAYISTATRYAALGAPTLYDHPGPIYGRGEPRRRISKKIFVGRL 232

Query: 241 PQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARRPHEICGH 300
           P EA +EDLRQYFGRFG I DVYIPRD KR+GHRGFGFVTFA++GVADRV+ RPHEICGH
Sbjct: 233 PPEANSEDLRQYFGRFGRIEDVYIPRDPKRTGHRGFGFVTFADEGVADRVSLRPHEICGH 292

Query: 301 QVAIDSATPLDDAGPSGNFML-NSMDSFGGFGGPVRPYGRMYGSLDYDDWGYGVPRGRP- 358
           +VAIDSATP+DDA PSGNFM+ NSM+SFGG+GGPVR YGRMYG LDYDDWGYGVP  RP 
Sbjct: 293 EVAIDSATPVDDARPSGNFMMNNSMESFGGYGGPVRSYGRMYGGLDYDDWGYGVPSVRPS 352

Query: 359 ----------PSRADWRYRPY 369
                     PSRADWRYRPY
Sbjct: 353 RAEYQEQLGRPSRADWRYRPY 373


>Medtr5g017280.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr5:6293125-6297976 | 20130731
          Length = 397

 Score =  585 bits (1508), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 296/405 (73%), Positives = 318/405 (78%), Gaps = 44/405 (10%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           MEQRKLVVLGIPW+VDT+GLKEYMSK+GELEDCIVMKER+TGRSRGFGYVTF SVDDAK 
Sbjct: 1   MEQRKLVVLGIPWDVDTEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTFASVDDAKE 60

Query: 61  VLSIEHNLGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGDITD 120
           VLS EH LG+RMLEVKVATPKEEM+AP KKV RIF+ARIPPSVTE TFRSHFEKYGDITD
Sbjct: 61  VLSGEHVLGDRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEETFRSHFEKYGDITD 120

Query: 121 LYMPKDQRSKTHRGIGFITYANADSVENLMKETHELEGSTVVVDRATPKEDDFKPIXXXX 180
           LYMPKDQ SK HRGIGFIT+ NA+SVENLM ETHEL GS VVVDRATPKEDD KP     
Sbjct: 121 LYMPKDQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKEDDVKPT---- 176

Query: 181 XXXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIFVGHL 240
                         AYNAYIS  TRYAALGAPTLYD+PG +YGRGEP R + KKIFVG L
Sbjct: 177 ----GRMSQGGGYGAYNAYISTATRYAALGAPTLYDHPGPIYGRGEPRRRISKKIFVGRL 232

Query: 241 PQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARRPHEICGH 300
           P EA +EDLRQYFGRFG I DVYIPRD KR+GHRGFGFVTFA++GVADRV+ RPHEICGH
Sbjct: 233 PPEANSEDLRQYFGRFGRIEDVYIPRDPKRTGHRGFGFVTFADEGVADRVSLRPHEICGH 292

Query: 301 QVAIDSATPLDDAGPSGNFML-NSMDSFGGFGGPVRPYGRMYGSLDYDDWGYGVPRGRP- 358
           +VAIDSATP+DDA PSGNFM+ NSM+SFGG+GGPVR YGRMYG LDYDDWGYGVP  RP 
Sbjct: 293 EVAIDSATPVDDARPSGNFMMNNSMESFGGYGGPVRSYGRMYGGLDYDDWGYGVPSVRPS 352

Query: 359 ----------------------------------PSRADWRYRPY 369
                                             PSRADWRYRPY
Sbjct: 353 RAEYQEQLGRPSRADYQEQIGRPSRADYQEHIGRPSRADWRYRPY 397


>Medtr5g017280.3 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr5:6293125-6297976 | 20130731
          Length = 397

 Score =  585 bits (1508), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 296/405 (73%), Positives = 318/405 (78%), Gaps = 44/405 (10%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           MEQRKLVVLGIPW+VDT+GLKEYMSK+GELEDCIVMKER+TGRSRGFGYVTF SVDDAK 
Sbjct: 1   MEQRKLVVLGIPWDVDTEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTFASVDDAKE 60

Query: 61  VLSIEHNLGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGDITD 120
           VLS EH LG+RMLEVKVATPKEEM+AP KKV RIF+ARIPPSVTE TFRSHFEKYGDITD
Sbjct: 61  VLSGEHVLGDRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEETFRSHFEKYGDITD 120

Query: 121 LYMPKDQRSKTHRGIGFITYANADSVENLMKETHELEGSTVVVDRATPKEDDFKPIXXXX 180
           LYMPKDQ SK HRGIGFIT+ NA+SVENLM ETHEL GS VVVDRATPKEDD KP     
Sbjct: 121 LYMPKDQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKEDDVKPT---- 176

Query: 181 XXXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIFVGHL 240
                         AYNAYIS  TRYAALGAPTLYD+PG +YGRGEP R + KKIFVG L
Sbjct: 177 ----GRMSQGGGYGAYNAYISTATRYAALGAPTLYDHPGPIYGRGEPRRRISKKIFVGRL 232

Query: 241 PQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARRPHEICGH 300
           P EA +EDLRQYFGRFG I DVYIPRD KR+GHRGFGFVTFA++GVADRV+ RPHEICGH
Sbjct: 233 PPEANSEDLRQYFGRFGRIEDVYIPRDPKRTGHRGFGFVTFADEGVADRVSLRPHEICGH 292

Query: 301 QVAIDSATPLDDAGPSGNFML-NSMDSFGGFGGPVRPYGRMYGSLDYDDWGYGVPRGRP- 358
           +VAIDSATP+DDA PSGNFM+ NSM+SFGG+GGPVR YGRMYG LDYDDWGYGVP  RP 
Sbjct: 293 EVAIDSATPVDDARPSGNFMMNNSMESFGGYGGPVRSYGRMYGGLDYDDWGYGVPSVRPS 352

Query: 359 ----------------------------------PSRADWRYRPY 369
                                             PSRADWRYRPY
Sbjct: 353 RAEYQEQLGRPSRADYQEQIGRPSRADYQEHIGRPSRADWRYRPY 397


>Medtr5g017280.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr5:6293125-6298060 | 20130731
          Length = 397

 Score =  585 bits (1508), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 296/405 (73%), Positives = 318/405 (78%), Gaps = 44/405 (10%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           MEQRKLVVLGIPW+VDT+GLKEYMSK+GELEDCIVMKER+TGRSRGFGYVTF SVDDAK 
Sbjct: 1   MEQRKLVVLGIPWDVDTEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTFASVDDAKE 60

Query: 61  VLSIEHNLGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGDITD 120
           VLS EH LG+RMLEVKVATPKEEM+AP KKV RIF+ARIPPSVTE TFRSHFEKYGDITD
Sbjct: 61  VLSGEHVLGDRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEETFRSHFEKYGDITD 120

Query: 121 LYMPKDQRSKTHRGIGFITYANADSVENLMKETHELEGSTVVVDRATPKEDDFKPIXXXX 180
           LYMPKDQ SK HRGIGFIT+ NA+SVENLM ETHEL GS VVVDRATPKEDD KP     
Sbjct: 121 LYMPKDQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKEDDVKPT---- 176

Query: 181 XXXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIFVGHL 240
                         AYNAYIS  TRYAALGAPTLYD+PG +YGRGEP R + KKIFVG L
Sbjct: 177 ----GRMSQGGGYGAYNAYISTATRYAALGAPTLYDHPGPIYGRGEPRRRISKKIFVGRL 232

Query: 241 PQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARRPHEICGH 300
           P EA +EDLRQYFGRFG I DVYIPRD KR+GHRGFGFVTFA++GVADRV+ RPHEICGH
Sbjct: 233 PPEANSEDLRQYFGRFGRIEDVYIPRDPKRTGHRGFGFVTFADEGVADRVSLRPHEICGH 292

Query: 301 QVAIDSATPLDDAGPSGNFML-NSMDSFGGFGGPVRPYGRMYGSLDYDDWGYGVPRGRP- 358
           +VAIDSATP+DDA PSGNFM+ NSM+SFGG+GGPVR YGRMYG LDYDDWGYGVP  RP 
Sbjct: 293 EVAIDSATPVDDARPSGNFMMNNSMESFGGYGGPVRSYGRMYGGLDYDDWGYGVPSVRPS 352

Query: 359 ----------------------------------PSRADWRYRPY 369
                                             PSRADWRYRPY
Sbjct: 353 RAEYQEQLGRPSRADYQEQIGRPSRADYQEHIGRPSRADWRYRPY 397


>Medtr5g097580.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr5:42749843-42753184 | 20130731
          Length = 493

 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 108/179 (60%), Gaps = 13/179 (7%)

Query: 5   KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSI 64
           KL + GI W+ + + L+EY S +GE+++ ++MK+R TGR+RGFG+V F     A  V+  
Sbjct: 7   KLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQE 66

Query: 65  EHNLGNRMLEVKVATPKEEMKAPVK------------KVNRIFIARIPPSVTEATFRSHF 112
           +HN+  RM+E K A P+++     +            +  +IF+  +  +VTE+ F+ +F
Sbjct: 67  KHNIDGRMVEAKKAVPRDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYF 126

Query: 113 EKYGDITDLYMPKDQRSKTHRGIGFITYANADSVEN-LMKETHELEGSTVVVDRATPKE 170
           +++G ITD+ +  D  ++  RG GFITY + ++V+  L+K  HEL G  V V RA PKE
Sbjct: 127 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKRAVPKE 185



 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 49/243 (20%)

Query: 93  RIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKE 152
           ++FI  I     E   R +F  YG++ +  + KD+ +   RG GF+ + +    + +++E
Sbjct: 7   KLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQE 66

Query: 153 THELEGSTVVVDRATPKEDDFKPIXXXXXXXXXXXXXXXXXXAYNAYISATTRYAALGAP 212
            H ++G  V   +A P++D                                         
Sbjct: 67  KHNIDGRMVEAKKAVPRDDQ---------------------------------------N 87

Query: 213 TLYDNPGSVYGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSG 272
            L    GS++G   P R   +KIFVG L    T  D ++YF +FG I DV +  D     
Sbjct: 88  VLSRTSGSIHGSPGPGRT--RKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQR 145

Query: 273 HRGFGFVTFAEDGVADRVARRP-HEICGHQVAIDSATPLD-DAGP-----SG-NFMLNSM 324
            RGFGF+T+  +   D+V  +  HE+ G  V +  A P +   GP     SG N+ L+ +
Sbjct: 146 PRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKRAVPKELSPGPARSPLSGYNYGLSRV 205

Query: 325 DSF 327
           +SF
Sbjct: 206 NSF 208



 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 4   RKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV-L 62
           RK+ V G+   V     K+Y  +FG + D +VM +  T R RGFG++T+ S +    V L
Sbjct: 106 RKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLL 165

Query: 63  SIEHNLGNRMLEVKVATPKEEMKAPVKK 90
              H L  +M+EVK A PKE    P + 
Sbjct: 166 KTFHELNGKMVEVKRAVPKELSPGPARS 193


>Medtr5g097580.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr5:42749843-42754792 | 20130731
          Length = 479

 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 109/182 (59%), Gaps = 13/182 (7%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           +  KL + GI W+ + + L+EY S +GE+++ ++MK+R TGR+RGFG+V F     A  V
Sbjct: 4   DSGKLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIV 63

Query: 62  LSIEHNLGNRMLEVKVATPKEEMKAPVK------------KVNRIFIARIPPSVTEATFR 109
           +  +HN+  RM+E K A P+++     +            +  +IF+  +  +VTE+ F+
Sbjct: 64  VQEKHNIDGRMVEAKKAVPRDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLASTVTESDFK 123

Query: 110 SHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVEN-LMKETHELEGSTVVVDRATP 168
            +F+++G ITD+ +  D  ++  RG GFITY + ++V+  L+K  HEL G  V V RA P
Sbjct: 124 KYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKRAVP 183

Query: 169 KE 170
           KE
Sbjct: 184 KE 185



 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 49/243 (20%)

Query: 93  RIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKE 152
           ++FI  I     E   R +F  YG++ +  + KD+ +   RG GF+ + +    + +++E
Sbjct: 7   KLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQE 66

Query: 153 THELEGSTVVVDRATPKEDDFKPIXXXXXXXXXXXXXXXXXXAYNAYISATTRYAALGAP 212
            H ++G  V   +A P++D                                         
Sbjct: 67  KHNIDGRMVEAKKAVPRDDQ---------------------------------------N 87

Query: 213 TLYDNPGSVYGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSG 272
            L    GS++G   P R   +KIFVG L    T  D ++YF +FG I DV +  D     
Sbjct: 88  VLSRTSGSIHGSPGPGRT--RKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQR 145

Query: 273 HRGFGFVTFAEDGVADRVARRP-HEICGHQVAIDSATPLD-DAGP-----SG-NFMLNSM 324
            RGFGF+T+  +   D+V  +  HE+ G  V +  A P +   GP     SG N+ L+ +
Sbjct: 146 PRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKRAVPKELSPGPARSPLSGYNYGLSRV 205

Query: 325 DSF 327
           +SF
Sbjct: 206 NSF 208



 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 4   RKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV-L 62
           RK+ V G+   V     K+Y  +FG + D +VM +  T R RGFG++T+ S +    V L
Sbjct: 106 RKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLL 165

Query: 63  SIEHNLGNRMLEVKVATPKEEMKAPVKK 90
              H L  +M+EVK A PKE    P + 
Sbjct: 166 KTFHELNGKMVEVKRAVPKELSPGPARS 193


>Medtr3g055990.1 | heterogeneous nuclear ribonucleoprotein 27C,
           putative | HC | chr3:22254761-22250364 | 20130731
          Length = 481

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 111/179 (62%), Gaps = 13/179 (7%)

Query: 5   KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSI 64
           KL + GI W+ D + LKEY + +GE+ + ++M++RATGR+RGFG+V F+    A+ V+  
Sbjct: 7   KLFIGGISWDTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVIID 66

Query: 65  EHNLGNRMLEVKVATPKEEMKAPVKKVN------------RIFIARIPPSVTEATFRSHF 112
           +H +  R +E K A P+++ +   ++              +IF+  +P ++TE+ F+ +F
Sbjct: 67  KHIIDGRTVEAKKAVPRDDQQNINRQTGSVQGSPGPGRTKKIFVGGLPSTITESDFKMYF 126

Query: 113 EKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET-HELEGSTVVVDRATPKE 170
           +++G ITD+ +  D  ++  RG GFITY + ++V+ ++ +T HEL G  V V RA PKE
Sbjct: 127 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKE 185



 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 66/273 (24%)

Query: 91  VNRIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLM 150
           + ++FI  I     E   + +F  YG++ +  + +D+ +   RG GF+ +++    E ++
Sbjct: 5   LGKLFIGGISWDTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVI 64

Query: 151 KETHELEGSTVVVDRATPKEDDFKPIXXXXXXXXXXXXXXXXXXAYNAYISATTRYAALG 210
            + H ++G TV   +A P++D                                       
Sbjct: 65  IDKHIIDGRTVEAKKAVPRDDQ-------------------------------------- 86

Query: 211 APTLYDNPGSVYGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKR 270
              +    GSV G   P R   KKIFVG LP   T  D + YF +FG I DV +  D   
Sbjct: 87  -QNINRQTGSVQGSPGPGRT--KKIFVGGLPSTITESDFKMYFDQFGTITDVVVMYDHNT 143

Query: 271 SGHRGFGFVTFAEDGVADRVARRP-HEICGHQVAIDSATPLD-DAGPS-------GNFML 321
              RGFGF+T+  +   DRV  +  HE+ G  V +  A P +   GP+        N+ L
Sbjct: 144 QRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKELSPGPTRSPLIGYNNYSL 203

Query: 322 N--------------SMDSFGGFGGPVRPYGRM 340
           N              SM   GGFG  VR  GR 
Sbjct: 204 NSRASSYLNNYGQGYSMSPIGGFG--VRMDGRF 234



 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 4   RKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVL- 62
           +K+ V G+P  +     K Y  +FG + D +VM +  T R RGFG++T+ S +    VL 
Sbjct: 106 KKIFVGGLPSTITESDFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLY 165

Query: 63  SIEHNLGNRMLEVKVATPKEEMKAPVKK 90
              H L  +M+EVK A PKE    P + 
Sbjct: 166 KTFHELNGKMVEVKRAVPKELSPGPTRS 193


>Medtr3g055990.2 | heterogeneous nuclear ribonucleoprotein 27C,
           putative | HC | chr3:22254761-22251454 | 20130731
          Length = 478

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 111/179 (62%), Gaps = 13/179 (7%)

Query: 5   KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSI 64
           KL + GI W+ D + LKEY + +GE+ + ++M++RATGR+RGFG+V F+    A+ V+  
Sbjct: 7   KLFIGGISWDTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVIID 66

Query: 65  EHNLGNRMLEVKVATPKEEMKAPVKKVN------------RIFIARIPPSVTEATFRSHF 112
           +H +  R +E K A P+++ +   ++              +IF+  +P ++TE+ F+ +F
Sbjct: 67  KHIIDGRTVEAKKAVPRDDQQNINRQTGSVQGSPGPGRTKKIFVGGLPSTITESDFKMYF 126

Query: 113 EKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET-HELEGSTVVVDRATPKE 170
           +++G ITD+ +  D  ++  RG GFITY + ++V+ ++ +T HEL G  V V RA PKE
Sbjct: 127 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKE 185



 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 66/273 (24%)

Query: 91  VNRIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLM 150
           + ++FI  I     E   + +F  YG++ +  + +D+ +   RG GF+ +++    E ++
Sbjct: 5   LGKLFIGGISWDTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVI 64

Query: 151 KETHELEGSTVVVDRATPKEDDFKPIXXXXXXXXXXXXXXXXXXAYNAYISATTRYAALG 210
            + H ++G TV   +A P++D                                       
Sbjct: 65  IDKHIIDGRTVEAKKAVPRDDQ-------------------------------------- 86

Query: 211 APTLYDNPGSVYGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKR 270
              +    GSV G   P R   KKIFVG LP   T  D + YF +FG I DV +  D   
Sbjct: 87  -QNINRQTGSVQGSPGPGRT--KKIFVGGLPSTITESDFKMYFDQFGTITDVVVMYDHNT 143

Query: 271 SGHRGFGFVTFAEDGVADRVARRP-HEICGHQVAIDSATPLD-DAGPS-------GNFML 321
              RGFGF+T+  +   DRV  +  HE+ G  V +  A P +   GP+        N+ L
Sbjct: 144 QRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKELSPGPTRSPLIGYNNYSL 203

Query: 322 N--------------SMDSFGGFGGPVRPYGRM 340
           N              SM   GGFG  VR  GR 
Sbjct: 204 NSRASSYLNNYGQGYSMSPIGGFG--VRMDGRF 234



 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 4   RKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVL- 62
           +K+ V G+P  +     K Y  +FG + D +VM +  T R RGFG++T+ S +    VL 
Sbjct: 106 KKIFVGGLPSTITESDFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLY 165

Query: 63  SIEHNLGNRMLEVKVATPKEEMKAPVKK 90
              H L  +M+EVK A PKE    P + 
Sbjct: 166 KTFHELNGKMVEVKRAVPKELSPGPTRS 193


>Medtr2g026180.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr2:9465398-9461370 | 20130731
          Length = 481

 Score =  128 bits (321), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 110/185 (59%), Gaps = 15/185 (8%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           M+  KL + GI W+ + D L++Y   FG++ + ++MK+R TGR+RGFG+V F     A+ 
Sbjct: 1   MDPGKLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAER 60

Query: 61  VLSIEHNLGNRMLEVKVATPKEEMK-------------APVK-KVNRIFIARIPPSVTEA 106
           V+  +H +  R +E K A P+++               AP   +  +IF+  +  +VTE+
Sbjct: 61  VVMEKHVIDGRTVEAKKAVPRDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLASTVTES 120

Query: 107 TFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET-HELEGSTVVVDR 165
            F+++F+++G ITD+ +  D  ++  RG GFITY + ++VE ++ +T HEL G  V V R
Sbjct: 121 DFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKR 180

Query: 166 ATPKE 170
           A PK+
Sbjct: 181 AVPKD 185



 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 103/244 (42%), Gaps = 45/244 (18%)

Query: 93  RIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKE 152
           ++FI  I     E   R +F+ +GD+ +  + KD+ +   RG GF+ +A+    E ++ E
Sbjct: 5   KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 64

Query: 153 THELEGSTVVVDRATPKEDDFKPIXXXXXXXXXXXXXXXXXXAYNAYISATTRYAALGAP 212
            H ++G TV   +A P++D                         N +  + +      AP
Sbjct: 65  KHVIDGRTVEAKKAVPRDDQ------------------------NVFTRSNSSSHGSPAP 100

Query: 213 TLYDNPGSVYGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSG 272
           T             P R   KKIFVG L    T  D + YF +FG I DV +  D     
Sbjct: 101 T-------------PIRT--KKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQR 145

Query: 273 HRGFGFVTF-AEDGVADRVARRPHEICGHQVAIDSATPLD-----DAGPSGNFMLNSMDS 326
            RGFGF+T+ +E+ V   + +  HE+ G  V +  A P D       G  G F   +M  
Sbjct: 146 PRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVPKDLSPSPSRGQLGGFSYGTMSR 205

Query: 327 FGGF 330
            G F
Sbjct: 206 VGSF 209



 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           +  +K+ V G+   V     K Y  +FG + D +VM +  T R RGFG++T+ S +  + 
Sbjct: 103 IRTKKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEK 162

Query: 61  VL-SIEHNLGNRMLEVKVATPKEEMKAPVK 89
           VL    H L  +M+EVK A PK+   +P +
Sbjct: 163 VLHKTFHELNGKMVEVKRAVPKDLSPSPSR 192


>Medtr2g026180.3 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr2:9465402-9461271 | 20130731
          Length = 481

 Score =  128 bits (321), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 110/185 (59%), Gaps = 15/185 (8%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           M+  KL + GI W+ + D L++Y   FG++ + ++MK+R TGR+RGFG+V F     A+ 
Sbjct: 1   MDPGKLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAER 60

Query: 61  VLSIEHNLGNRMLEVKVATPKEEMK-------------APVK-KVNRIFIARIPPSVTEA 106
           V+  +H +  R +E K A P+++               AP   +  +IF+  +  +VTE+
Sbjct: 61  VVMEKHVIDGRTVEAKKAVPRDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLASTVTES 120

Query: 107 TFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET-HELEGSTVVVDR 165
            F+++F+++G ITD+ +  D  ++  RG GFITY + ++VE ++ +T HEL G  V V R
Sbjct: 121 DFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKR 180

Query: 166 ATPKE 170
           A PK+
Sbjct: 181 AVPKD 185



 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 103/244 (42%), Gaps = 45/244 (18%)

Query: 93  RIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKE 152
           ++FI  I     E   R +F+ +GD+ +  + KD+ +   RG GF+ +A+    E ++ E
Sbjct: 5   KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 64

Query: 153 THELEGSTVVVDRATPKEDDFKPIXXXXXXXXXXXXXXXXXXAYNAYISATTRYAALGAP 212
            H ++G TV   +A P++D                         N +  + +      AP
Sbjct: 65  KHVIDGRTVEAKKAVPRDDQ------------------------NVFTRSNSSSHGSPAP 100

Query: 213 TLYDNPGSVYGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSG 272
           T             P R   KKIFVG L    T  D + YF +FG I DV +  D     
Sbjct: 101 T-------------PIRT--KKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQR 145

Query: 273 HRGFGFVTF-AEDGVADRVARRPHEICGHQVAIDSATPLD-----DAGPSGNFMLNSMDS 326
            RGFGF+T+ +E+ V   + +  HE+ G  V +  A P D       G  G F   +M  
Sbjct: 146 PRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVPKDLSPSPSRGQLGGFSYGTMSR 205

Query: 327 FGGF 330
            G F
Sbjct: 206 VGSF 209



 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           +  +K+ V G+   V     K Y  +FG + D +VM +  T R RGFG++T+ S +  + 
Sbjct: 103 IRTKKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEK 162

Query: 61  VL-SIEHNLGNRMLEVKVATPKEEMKAPVK 89
           VL    H L  +M+EVK A PK+   +P +
Sbjct: 163 VLHKTFHELNGKMVEVKRAVPKDLSPSPSR 192


>Medtr2g026180.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr2:9465359-9461307 | 20130731
          Length = 481

 Score =  128 bits (321), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 110/185 (59%), Gaps = 15/185 (8%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           M+  KL + GI W+ + D L++Y   FG++ + ++MK+R TGR+RGFG+V F     A+ 
Sbjct: 1   MDPGKLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAER 60

Query: 61  VLSIEHNLGNRMLEVKVATPKEEMK-------------APVK-KVNRIFIARIPPSVTEA 106
           V+  +H +  R +E K A P+++               AP   +  +IF+  +  +VTE+
Sbjct: 61  VVMEKHVIDGRTVEAKKAVPRDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLASTVTES 120

Query: 107 TFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET-HELEGSTVVVDR 165
            F+++F+++G ITD+ +  D  ++  RG GFITY + ++VE ++ +T HEL G  V V R
Sbjct: 121 DFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKR 180

Query: 166 ATPKE 170
           A PK+
Sbjct: 181 AVPKD 185



 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 103/244 (42%), Gaps = 45/244 (18%)

Query: 93  RIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKE 152
           ++FI  I     E   R +F+ +GD+ +  + KD+ +   RG GF+ +A+    E ++ E
Sbjct: 5   KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 64

Query: 153 THELEGSTVVVDRATPKEDDFKPIXXXXXXXXXXXXXXXXXXAYNAYISATTRYAALGAP 212
            H ++G TV   +A P++D                         N +  + +      AP
Sbjct: 65  KHVIDGRTVEAKKAVPRDDQ------------------------NVFTRSNSSSHGSPAP 100

Query: 213 TLYDNPGSVYGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSG 272
           T             P R   KKIFVG L    T  D + YF +FG I DV +  D     
Sbjct: 101 T-------------PIRT--KKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQR 145

Query: 273 HRGFGFVTF-AEDGVADRVARRPHEICGHQVAIDSATPLD-----DAGPSGNFMLNSMDS 326
            RGFGF+T+ +E+ V   + +  HE+ G  V +  A P D       G  G F   +M  
Sbjct: 146 PRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVPKDLSPSPSRGQLGGFSYGTMSR 205

Query: 327 FGGF 330
            G F
Sbjct: 206 VGSF 209



 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           +  +K+ V G+   V     K Y  +FG + D +VM +  T R RGFG++T+ S +  + 
Sbjct: 103 IRTKKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEK 162

Query: 61  VL-SIEHNLGNRMLEVKVATPKEEMKAPVK 89
           VL    H L  +M+EVK A PK+   +P +
Sbjct: 163 VLHKTFHELNGKMVEVKRAVPKDLSPSPSR 192


>Medtr1g073690.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr1:32695268-32699181 | 20130731
          Length = 469

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 19/188 (10%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           +Q KL + GI W+ + + LKE+ S +G++ +  VM+E+ TG+ RGFG+V F+       V
Sbjct: 4   DQGKLFIGGISWDTNEEKLKEHFSNYGDVLNTSVMREKNTGKPRGFGFVVFSDPSVLDRV 63

Query: 62  LSIEHNLGNRMLEVKVATPKEEMKAPVK------------------KVNRIFIARIPPSV 103
           L  +H +  R ++ K A  +E+ +  V                   +  +IF+  +PP++
Sbjct: 64  LEDKHVIDGRTVDAKRAFSREDQQISVSSRSGNSNSGMNSGNGGNMRTKKIFVGGLPPTL 123

Query: 104 TEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET-HELEGSTVV 162
            E  FR +FE YG +TD+ +  DQ +   RG GFIT+   ++V+ ++ +T H+L G  V 
Sbjct: 124 AEEKFRQYFEAYGHVTDVVVMYDQNTGRPRGFGFITFDTEEAVDRVLHKTFHDLNGKQVE 183

Query: 163 VDRATPKE 170
           V RA PK+
Sbjct: 184 VKRALPKD 191



 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 101/227 (44%), Gaps = 37/227 (16%)

Query: 93  RIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKE 152
           ++FI  I     E   + HF  YGD+ +  + +++ +   RG GF+ +++   ++ ++++
Sbjct: 7   KLFIGGISWDTNEEKLKEHFSNYGDVLNTSVMREKNTGKPRGFGFVVFSDPSVLDRVLED 66

Query: 153 THELEGSTVVVDRATPKEDDFKPIXXXXXXXXXXXXXXXXXXAYNAYISATTRYAALGAP 212
            H ++G TV   RA  +ED                            IS ++R     + 
Sbjct: 67  KHVIDGRTVDAKRAFSREDQ--------------------------QISVSSRSGNSNSG 100

Query: 213 TLYDNPGSVYGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSG 272
               N G++  +         KIFVG LP     E  RQYF  +GH+ DV +  D     
Sbjct: 101 MNSGNGGNMRTK---------KIFVGGLPPTLAEEKFRQYFEAYGHVTDVVVMYDQNTGR 151

Query: 273 HRGFGFVTFAEDGVADRVARRP-HEICGHQVAIDSATPLDDAGPSGN 318
            RGFGF+TF  +   DRV  +  H++ G QV +  A P  DA P  N
Sbjct: 152 PRGFGFITFDTEEAVDRVLHKTFHDLNGKQVEVKRALP-KDANPGAN 197



 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 1/83 (1%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           M  +K+ V G+P  +  +  ++Y   +G + D +VM ++ TGR RGFG++TF + +    
Sbjct: 109 MRTKKIFVGGLPPTLAEEKFRQYFEAYGHVTDVVVMYDQNTGRPRGFGFITFDTEEAVDR 168

Query: 61  VL-SIEHNLGNRMLEVKVATPKE 82
           VL    H+L  + +EVK A PK+
Sbjct: 169 VLHKTFHDLNGKQVEVKRALPKD 191


>Medtr1g073690.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr1:32695268-32699181 | 20130731
          Length = 469

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 19/188 (10%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           +Q KL + GI W+ + + LKE+ S +G++ +  VM+E+ TG+ RGFG+V F+       V
Sbjct: 4   DQGKLFIGGISWDTNEEKLKEHFSNYGDVLNTSVMREKNTGKPRGFGFVVFSDPSVLDRV 63

Query: 62  LSIEHNLGNRMLEVKVATPKEEMKAPVK------------------KVNRIFIARIPPSV 103
           L  +H +  R ++ K A  +E+ +  V                   +  +IF+  +PP++
Sbjct: 64  LEDKHVIDGRTVDAKRAFSREDQQISVSSRSGNSNSGMNSGNGGNMRTKKIFVGGLPPTL 123

Query: 104 TEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET-HELEGSTVV 162
            E  FR +FE YG +TD+ +  DQ +   RG GFIT+   ++V+ ++ +T H+L G  V 
Sbjct: 124 AEEKFRQYFEAYGHVTDVVVMYDQNTGRPRGFGFITFDTEEAVDRVLHKTFHDLNGKQVE 183

Query: 163 VDRATPKE 170
           V RA PK+
Sbjct: 184 VKRALPKD 191



 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 101/227 (44%), Gaps = 37/227 (16%)

Query: 93  RIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKE 152
           ++FI  I     E   + HF  YGD+ +  + +++ +   RG GF+ +++   ++ ++++
Sbjct: 7   KLFIGGISWDTNEEKLKEHFSNYGDVLNTSVMREKNTGKPRGFGFVVFSDPSVLDRVLED 66

Query: 153 THELEGSTVVVDRATPKEDDFKPIXXXXXXXXXXXXXXXXXXAYNAYISATTRYAALGAP 212
            H ++G TV   RA  +ED                            IS ++R     + 
Sbjct: 67  KHVIDGRTVDAKRAFSREDQ--------------------------QISVSSRSGNSNSG 100

Query: 213 TLYDNPGSVYGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSG 272
               N G++  +         KIFVG LP     E  RQYF  +GH+ DV +  D     
Sbjct: 101 MNSGNGGNMRTK---------KIFVGGLPPTLAEEKFRQYFEAYGHVTDVVVMYDQNTGR 151

Query: 273 HRGFGFVTFAEDGVADRVARRP-HEICGHQVAIDSATPLDDAGPSGN 318
            RGFGF+TF  +   DRV  +  H++ G QV +  A P  DA P  N
Sbjct: 152 PRGFGFITFDTEEAVDRVLHKTFHDLNGKQVEVKRALP-KDANPGAN 197



 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 1/83 (1%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           M  +K+ V G+P  +  +  ++Y   +G + D +VM ++ TGR RGFG++TF + +    
Sbjct: 109 MRTKKIFVGGLPPTLAEEKFRQYFEAYGHVTDVVVMYDQNTGRPRGFGFITFDTEEAVDR 168

Query: 61  VL-SIEHNLGNRMLEVKVATPKE 82
           VL    H+L  + +EVK A PK+
Sbjct: 169 VLHKTFHDLNGKQVEVKRALPKD 191


>Medtr6g004810.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr6:438661-434987 | 20130731
          Length = 383

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 98/173 (56%), Gaps = 2/173 (1%)

Query: 5   KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSI 64
           K+ + G+  E       ++  K+GE+ D ++MK+R TG+ RGFG++T+        V+  
Sbjct: 46  KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIED 105

Query: 65  EHNLGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGDITDLYMP 124
            H + ++ +E+K   P+  + +   +  +IF+  IP +VTE  FR  F +YG++ D  + 
Sbjct: 106 SHIINSKQVEIKRTIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIM 165

Query: 125 KDQRSKTHRGIGFITYANADSVENLMKETHELE--GSTVVVDRATPKEDDFKP 175
           +D  +   RG GF+T+   ++V++L+   +++E  G+ V + +A PK+ +  P
Sbjct: 166 RDHSTNRSRGFGFVTFDTEEAVDDLLSMGNKIEFAGTQVEIKKAEPKKANAPP 218



 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 92/225 (40%), Gaps = 55/225 (24%)

Query: 93  RIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKE 152
           +IFI  +    T A F  HF KYG+ITD  + KD+++   RG GFITYA+   V+ +   
Sbjct: 46  KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKV--- 102

Query: 153 THELEGSTVVVDRATPKEDDFKPIXXXXXXXXXXXXXXXXXXAYNAYISATTRYAALGAP 212
              +E S ++  +                                  I  T    A+G+ 
Sbjct: 103 ---IEDSHIINSKQVE-------------------------------IKRTIPRGAVGSK 128

Query: 213 TLYDNPGSVYGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSG 272
                               KKIFVG +P   T ++ R +F R+G + D  I RD   + 
Sbjct: 129 DFRT----------------KKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNR 172

Query: 273 HRGFGFVTF-AEDGVADRVAR-RPHEICGHQVAIDSATPLDDAGP 315
            RGFGFVTF  E+ V D ++     E  G QV I  A P     P
Sbjct: 173 SRGFGFVTFDTEEAVDDLLSMGNKIEFAGTQVEIKKAEPKKANAP 217



 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 2/86 (2%)

Query: 4   RKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLS 63
           +K+ V GIP  V  D  +++ +++GE++D  +M++ +T RSRGFG+VTF + +   ++LS
Sbjct: 133 KKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFVTFDTEEAVDDLLS 192

Query: 64  IEHNL--GNRMLEVKVATPKEEMKAP 87
           + + +      +E+K A PK+    P
Sbjct: 193 MGNKIEFAGTQVEIKKAEPKKANAPP 218


>Medtr3g103420.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr3:47715877-47717644 | 20130731
          Length = 371

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 101/191 (52%), Gaps = 20/191 (10%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           ++ KL V GI  E   D LK + +K+G++    +  +R T   RGFG+VTF+ +  A N 
Sbjct: 8   DKAKLFVGGISRETTEDTLKHHFTKYGDVLHSTISFDRTTRIPRGFGFVTFSDISSAHNA 67

Query: 62  LSIEHNLGNRMLEVKVATPKEEMKAPVK-------------------KVNRIFIARIPPS 102
           L   H +  R +EV+ A P+ E     +                   +  +IF+  +P +
Sbjct: 68  LQDTHAILGRKVEVRKAIPRSEQLQQNQLQNRGGNSYSGYECGNEHIRTKKIFVGGLPAN 127

Query: 103 VTEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVEN-LMKETHELEGSTV 161
           ++   F+ +FE++G ITD+ + +D  +   RG GFIT+ + DSV++ +M+  H+L G  V
Sbjct: 128 MSVEEFKRYFERFGRITDVVVMQDSLTHRPRGFGFITFDSEDSVQSVMMRSFHDLNGRQV 187

Query: 162 VVDRATPKEDD 172
            V RA P+E +
Sbjct: 188 EVKRAVPREGN 198



 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 36/227 (15%)

Query: 93  RIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKE 152
           ++F+  I    TE T + HF KYGD+    +  D+ ++  RG GF+T+++  S  N +++
Sbjct: 11  KLFVGGISRETTEDTLKHHFTKYGDVLHSTISFDRTTRIPRGFGFVTFSDISSAHNALQD 70

Query: 153 THELEGSTVVVDRATPKEDDFKPIXXXXXXXXXXXXXXXXXXAYNAYISATTRYAALGAP 212
           TH + G  V V +A P+ +                       +Y+ Y             
Sbjct: 71  THAILGRKVEVRKAIPRSEQ----------LQQNQLQNRGGNSYSGYECGN--------- 111

Query: 213 TLYDNPGSVYGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSG 272
                        E  R   KKIFVG LP   + E+ ++YF RFG I DV + +D+    
Sbjct: 112 -------------EHIRT--KKIFVGGLPANMSVEEFKRYFERFGRITDVVVMQDSLTHR 156

Query: 273 HRGFGFVTF-AEDGVADRVARRPHEICGHQVAIDSATPLD-DAGPSG 317
            RGFGF+TF +ED V   + R  H++ G QV +  A P + +AG  G
Sbjct: 157 PRGFGFITFDSEDSVQSVMMRSFHDLNGRQVEVKRAVPREGNAGSEG 203


>Medtr3g082650.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr3:37290152-37292326 | 20130731
          Length = 352

 Score =  102 bits (253), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 95/168 (56%), Gaps = 2/168 (1%)

Query: 5   KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSI 64
           K+ + G+  +   +   +Y  ++GE+ D ++MK+R TGR RGFG++T+        V+  
Sbjct: 19  KIFIGGLAKDTTLEEFVKYFERYGEITDSVIMKDRHTGRPRGFGFITYADASVVDQVIQE 78

Query: 65  EHNLGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGDITDLYMP 124
            H + ++ +E+K   PK   +    K  +IF+  IP +V+E   +  F K+G++ +  + 
Sbjct: 79  NHIINDKQVEIKRTIPKGASQTNDFKTKKIFVGGIPATVSEDELKIFFSKHGNVVEHEII 138

Query: 125 KDQRSKTHRGIGFITYANADSVENLMKETH--ELEGSTVVVDRATPKE 170
           +D  +K  RG GF+ + +  +V+NL+ + +  +++ + V + +A PK+
Sbjct: 139 RDHTTKRSRGFGFVVFDSDKAVDNLLADGNMIDMDDTQVEIKKAEPKK 186



 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 43/76 (56%)

Query: 234 KIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARR 293
           KIF+G L ++ T E+  +YF R+G I D  I +D      RGFGF+T+A+  V D+V + 
Sbjct: 19  KIFIGGLAKDTTLEEFVKYFERYGEITDSVIMKDRHTGRPRGFGFITYADASVVDQVIQE 78

Query: 294 PHEICGHQVAIDSATP 309
            H I   QV I    P
Sbjct: 79  NHIINDKQVEIKRTIP 94



 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 2/84 (2%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
            + +K+ V GIP  V  D LK + SK G + +  ++++  T RSRGFG+V F S     N
Sbjct: 103 FKTKKIFVGGIPATVSEDELKIFFSKHGNVVEHEIIRDHTTKRSRGFGFVVFDSDKAVDN 162

Query: 61  VLSIEH--NLGNRMLEVKVATPKE 82
           +L+  +  ++ +  +E+K A PK+
Sbjct: 163 LLADGNMIDMDDTQVEIKKAEPKK 186


>Medtr8g463890.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr8:22547309-22542060 | 20130731
          Length = 445

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 4/156 (2%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           + +RKL + G+ W+  T+GL+   S +GELE+ IV+ ++ATG+S+G+G+VTF  VD A  
Sbjct: 70  ISRRKLFIRGLGWDTTTEGLRSLFSTYGELEEAIVIVDKATGKSKGYGFVTFLHVDGALL 129

Query: 61  VL-SIEHNLGNRMLEVKVA---TPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG 116
            L      +  R+   ++A          A      +I+++ +PP +      +HF  YG
Sbjct: 130 ALREPSKRIDGRVTVTQLAAAGNSGSNTNAADVAQRKIYVSNVPPDLPGDKLLAHFSIYG 189

Query: 117 DITDLYMPKDQRSKTHRGIGFITYANADSVENLMKE 152
           +I +  +  D+++   +G     Y   +     + E
Sbjct: 190 EIEEGPLGFDKQTGRSKGFALFVYKTPEGANAAVSE 225


>Medtr7g118120.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:49025533-49031900 | 20130731
          Length = 479

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 132/328 (40%), Gaps = 72/328 (21%)

Query: 5   KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSI 64
           ++ + G+P +   D ++E     G++ +  ++K+R TG S+G+ +V + + + A+  +  
Sbjct: 105 EVFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAIDD 164

Query: 65  EHN--LGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG-DITDL 121
            HN     + L   ++  K          +R+FI  IP + TE  FR   E  G  +  +
Sbjct: 165 IHNKEFKGKTLRCLLSETK----------HRLFIGNIPKTWTEDEFRKAVEGVGPGVESI 214

Query: 122 YMPKD-QRSKTHRGIGFITYAN---AD-SVENLMKETHELEGSTVVVDRATPKEDDFKPI 176
            + KD Q    +RG  F+ Y N   AD S + +     +L+G T  V  A PK       
Sbjct: 215 DLIKDPQNQSRNRGFAFVLYYNNACADFSRQKMSSVGFKLDGITPTVTWADPK------- 267

Query: 177 XXXXXXXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIF 236
                                   S     AA     LY                     
Sbjct: 268 -----------------------TSPDQSAAASQVKALY--------------------- 283

Query: 237 VGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVAR--RP 294
           V ++P+  TTE L++ F R G +  V +P   K SG R FGF+ +AE   A +  +    
Sbjct: 284 VKNIPENVTTEQLKELFRRHGEVTKVVMP-PGKASGKRDFGFIHYAERSSALKAVKETEK 342

Query: 295 HEICGHQVAIDSATPLDDAGPSGNFMLN 322
           +EI G  + +  A P  +  P G +  N
Sbjct: 343 YEIDGQALEVVIAKPQAEKKPDGGYAYN 370



 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 11/177 (6%)

Query: 3   QRKLVVLGIPWEVDTDGLKEYMSKFGE-LEDCIVMKE-RATGRSRGFGYVTFTSVDDA-- 58
           + +L +  IP     D  ++ +   G  +E   ++K+ +   R+RGF +V + +   A  
Sbjct: 183 KHRLFIGNIPKTWTEDEFRKAVEGVGPGVESIDLIKDPQNQSRNRGFAFVLYYNNACADF 242

Query: 59  --KNVLSIEHNLGNRMLEVKVATPKE--EMKAPVKKVNRIFIARIPPSVTEATFRSHFEK 114
             + + S+   L      V  A PK   +  A   +V  +++  IP +VT    +  F +
Sbjct: 243 SRQKMSSVGFKLDGITPTVTWADPKTSPDQSAAASQVKALYVKNIPENVTTEQLKELFRR 302

Query: 115 YGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET--HELEGSTVVVDRATPK 169
           +G++T + MP  + S   R  GFI YA   S    +KET  +E++G  + V  A P+
Sbjct: 303 HGEVTKVVMPPGKAS-GKRDFGFIHYAERSSALKAVKETEKYEIDGQALEVVIAKPQ 358


>Medtr7g118120.3 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:49025533-49031887 | 20130731
          Length = 479

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 132/328 (40%), Gaps = 72/328 (21%)

Query: 5   KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSI 64
           ++ + G+P +   D ++E     G++ +  ++K+R TG S+G+ +V + + + A+  +  
Sbjct: 105 EVFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAIDD 164

Query: 65  EHN--LGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG-DITDL 121
            HN     + L   ++  K          +R+FI  IP + TE  FR   E  G  +  +
Sbjct: 165 IHNKEFKGKTLRCLLSETK----------HRLFIGNIPKTWTEDEFRKAVEGVGPGVESI 214

Query: 122 YMPKD-QRSKTHRGIGFITYAN---AD-SVENLMKETHELEGSTVVVDRATPKEDDFKPI 176
            + KD Q    +RG  F+ Y N   AD S + +     +L+G T  V  A PK       
Sbjct: 215 DLIKDPQNQSRNRGFAFVLYYNNACADFSRQKMSSVGFKLDGITPTVTWADPK------- 267

Query: 177 XXXXXXXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIF 236
                                   S     AA     LY                     
Sbjct: 268 -----------------------TSPDQSAAASQVKALY--------------------- 283

Query: 237 VGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVAR--RP 294
           V ++P+  TTE L++ F R G +  V +P   K SG R FGF+ +AE   A +  +    
Sbjct: 284 VKNIPENVTTEQLKELFRRHGEVTKVVMP-PGKASGKRDFGFIHYAERSSALKAVKETEK 342

Query: 295 HEICGHQVAIDSATPLDDAGPSGNFMLN 322
           +EI G  + +  A P  +  P G +  N
Sbjct: 343 YEIDGQALEVVIAKPQAEKKPDGGYAYN 370



 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 11/177 (6%)

Query: 3   QRKLVVLGIPWEVDTDGLKEYMSKFGE-LEDCIVMKE-RATGRSRGFGYVTFTSVDDA-- 58
           + +L +  IP     D  ++ +   G  +E   ++K+ +   R+RGF +V + +   A  
Sbjct: 183 KHRLFIGNIPKTWTEDEFRKAVEGVGPGVESIDLIKDPQNQSRNRGFAFVLYYNNACADF 242

Query: 59  --KNVLSIEHNLGNRMLEVKVATPKE--EMKAPVKKVNRIFIARIPPSVTEATFRSHFEK 114
             + + S+   L      V  A PK   +  A   +V  +++  IP +VT    +  F +
Sbjct: 243 SRQKMSSVGFKLDGITPTVTWADPKTSPDQSAAASQVKALYVKNIPENVTTEQLKELFRR 302

Query: 115 YGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET--HELEGSTVVVDRATPK 169
           +G++T + MP  + S   R  GFI YA   S    +KET  +E++G  + V  A P+
Sbjct: 303 HGEVTKVVMPPGKAS-GKRDFGFIHYAERSSALKAVKETEKYEIDGQALEVVIAKPQ 358


>Medtr7g118120.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:49025861-49031887 | 20130731
          Length = 479

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 132/328 (40%), Gaps = 72/328 (21%)

Query: 5   KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSI 64
           ++ + G+P +   D ++E     G++ +  ++K+R TG S+G+ +V + + + A+  +  
Sbjct: 105 EVFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAIDD 164

Query: 65  EHN--LGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG-DITDL 121
            HN     + L   ++  K          +R+FI  IP + TE  FR   E  G  +  +
Sbjct: 165 IHNKEFKGKTLRCLLSETK----------HRLFIGNIPKTWTEDEFRKAVEGVGPGVESI 214

Query: 122 YMPKD-QRSKTHRGIGFITYAN---AD-SVENLMKETHELEGSTVVVDRATPKEDDFKPI 176
            + KD Q    +RG  F+ Y N   AD S + +     +L+G T  V  A PK       
Sbjct: 215 DLIKDPQNQSRNRGFAFVLYYNNACADFSRQKMSSVGFKLDGITPTVTWADPK------- 267

Query: 177 XXXXXXXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIF 236
                                   S     AA     LY                     
Sbjct: 268 -----------------------TSPDQSAAASQVKALY--------------------- 283

Query: 237 VGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVAR--RP 294
           V ++P+  TTE L++ F R G +  V +P   K SG R FGF+ +AE   A +  +    
Sbjct: 284 VKNIPENVTTEQLKELFRRHGEVTKVVMP-PGKASGKRDFGFIHYAERSSALKAVKETEK 342

Query: 295 HEICGHQVAIDSATPLDDAGPSGNFMLN 322
           +EI G  + +  A P  +  P G +  N
Sbjct: 343 YEIDGQALEVVIAKPQAEKKPDGGYAYN 370



 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 11/177 (6%)

Query: 3   QRKLVVLGIPWEVDTDGLKEYMSKFGE-LEDCIVMKE-RATGRSRGFGYVTFTSVDDA-- 58
           + +L +  IP     D  ++ +   G  +E   ++K+ +   R+RGF +V + +   A  
Sbjct: 183 KHRLFIGNIPKTWTEDEFRKAVEGVGPGVESIDLIKDPQNQSRNRGFAFVLYYNNACADF 242

Query: 59  --KNVLSIEHNLGNRMLEVKVATPKE--EMKAPVKKVNRIFIARIPPSVTEATFRSHFEK 114
             + + S+   L      V  A PK   +  A   +V  +++  IP +VT    +  F +
Sbjct: 243 SRQKMSSVGFKLDGITPTVTWADPKTSPDQSAAASQVKALYVKNIPENVTTEQLKELFRR 302

Query: 115 YGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET--HELEGSTVVVDRATPK 169
           +G++T + MP  + S   R  GFI YA   S    +KET  +E++G  + V  A P+
Sbjct: 303 HGEVTKVVMPPGKAS-GKRDFGFIHYAERSSALKAVKETEKYEIDGQALEVVIAKPQ 358


>Medtr4g088010.1 | heterogeneous nuclear ribonucleoprotein | HC |
           chr4:34502474-34498575 | 20130731
          Length = 356

 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 12/175 (6%)

Query: 3   QRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVL 62
           +RKL V G+  E  T+ L+   S +G+L++ IV+ ++ATGRS+G+G+V +  VD A  VL
Sbjct: 75  RRKLFVRGLSGETTTETLRTVFSSYGDLDEAIVIFDKATGRSKGYGFVVYRHVDGA--VL 132

Query: 63  SIEH---NLGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGDIT 119
           +++     +  RM   ++A           +  ++F+  +P  V+  +  S F KYG+I 
Sbjct: 133 ALKEPSKKIDGRMTVTQLAAAGSTGGDVSSR--KVFVGNVPFEVSAESLLSEFSKYGEIE 190

Query: 120 DLYMPKDQRSKTHRGIGFITYANADSVENLMKETHE-LEGSTVV----VDRATPK 169
           +  +  D+ S   RG  F  Y   +  +N + E+ + ++G  V+    VD   PK
Sbjct: 191 EGPLGFDKASGKTRGFAFFVYKTEEGAKNSVAESMKTVDGHQVICKFAVDNKKPK 245


>Medtr4g052940.3 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr4:19205591-19210680 | 20130731
          Length = 504

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 137/360 (38%), Gaps = 81/360 (22%)

Query: 8   VLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIEHN 67
           V GIP +  ++ LKE+  + GE+    +MK +    ++GF +VT+ +V+ A   +   +N
Sbjct: 114 VGGIPLDAKSEDLKEFCERIGEVVQVRIMKGKDASENKGFAFVTYRNVELASKAIEELNN 173

Query: 68  LGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG-DITDLYMPKD 126
              +  ++K +T + +        NR+FI  IP S  E   +      G  +T + + KD
Sbjct: 174 TEFKGRKIKCSTSQAK--------NRLFIGNIPRSWGEKDLKKVVTDIGPGVTAVELVKD 225

Query: 127 QRS-KTHRGIGFITYANADSVE----NLMKETHELEGSTVVVDRATPKEDDFKPIXXXXX 181
            ++   +RG  FI Y N    E     +M  + +L  ++  V  A PK  D         
Sbjct: 226 MKNISNNRGFAFIDYHNNQCAEYGRQKMMSPSFKLGDNSPTVSWADPKNSDS-------- 277

Query: 182 XXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIFVGHLP 241
                              SA+++  A                          ++V +LP
Sbjct: 278 -------------------SASSQVKA--------------------------VYVKNLP 292

Query: 242 QEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARRP--HEICG 299
           +  T E L++ F   G I  V +P           GFV FAE   A +  +    +E+ G
Sbjct: 293 KNVTQEQLKKLFEHHGKITKVVLPPPKSGQEKNRIGFVHFAERSNAMKALKNTERYELDG 352

Query: 300 HQVAIDSATPLDD-----AGPSGNFMLNSMDSFGGFGGPVRPYGRMYGSLDYDDWGYGVP 354
             +    A P  D     +      +L S     G+G    PYG +         GYG P
Sbjct: 353 QNLECSLAKPQADQKAVVSNTQTQGLLPSYPPPVGYGLVGNPYGAL-------GAGYGAP 405



 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 8/177 (4%)

Query: 3   QRKLVVLGIPWEVDTDGLKEYMSKFGELEDCI--VMKERATGRSRGFGYVTFTSVDDA-- 58
           + +L +  IP       LK+ ++  G     +  V   +    +RGF ++ + +   A  
Sbjct: 189 KNRLFIGNIPRSWGEKDLKKVVTDIGPGVTAVELVKDMKNISNNRGFAFIDYHNNQCAEY 248

Query: 59  --KNVLSIEHNLGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG 116
             + ++S    LG+    V  A PK    +   +V  +++  +P +VT+   +  FE +G
Sbjct: 249 GRQKMMSPSFKLGDNSPTVSWADPKNSDSSASSQVKAVYVKNLPKNVTQEQLKKLFEHHG 308

Query: 117 DITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET--HELEGSTVVVDRATPKED 171
            IT + +P  +  +    IGF+ +A   +    +K T  +EL+G  +    A P+ D
Sbjct: 309 KITKVVLPPPKSGQEKNRIGFVHFAERSNAMKALKNTERYELDGQNLECSLAKPQAD 365


>Medtr4g052940.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr4:19205591-19210680 | 20130731
          Length = 504

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 137/360 (38%), Gaps = 81/360 (22%)

Query: 8   VLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIEHN 67
           V GIP +  ++ LKE+  + GE+    +MK +    ++GF +VT+ +V+ A   +   +N
Sbjct: 114 VGGIPLDAKSEDLKEFCERIGEVVQVRIMKGKDASENKGFAFVTYRNVELASKAIEELNN 173

Query: 68  LGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG-DITDLYMPKD 126
              +  ++K +T + +        NR+FI  IP S  E   +      G  +T + + KD
Sbjct: 174 TEFKGRKIKCSTSQAK--------NRLFIGNIPRSWGEKDLKKVVTDIGPGVTAVELVKD 225

Query: 127 QRS-KTHRGIGFITYANADSVE----NLMKETHELEGSTVVVDRATPKEDDFKPIXXXXX 181
            ++   +RG  FI Y N    E     +M  + +L  ++  V  A PK  D         
Sbjct: 226 MKNISNNRGFAFIDYHNNQCAEYGRQKMMSPSFKLGDNSPTVSWADPKNSDS-------- 277

Query: 182 XXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIFVGHLP 241
                              SA+++  A                          ++V +LP
Sbjct: 278 -------------------SASSQVKA--------------------------VYVKNLP 292

Query: 242 QEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARRP--HEICG 299
           +  T E L++ F   G I  V +P           GFV FAE   A +  +    +E+ G
Sbjct: 293 KNVTQEQLKKLFEHHGKITKVVLPPPKSGQEKNRIGFVHFAERSNAMKALKNTERYELDG 352

Query: 300 HQVAIDSATPLDD-----AGPSGNFMLNSMDSFGGFGGPVRPYGRMYGSLDYDDWGYGVP 354
             +    A P  D     +      +L S     G+G    PYG +         GYG P
Sbjct: 353 QNLECSLAKPQADQKAVVSNTQTQGLLPSYPPPVGYGLVGNPYGAL-------GAGYGAP 405



 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 8/177 (4%)

Query: 3   QRKLVVLGIPWEVDTDGLKEYMSKFGELEDCI--VMKERATGRSRGFGYVTFTSVDDA-- 58
           + +L +  IP       LK+ ++  G     +  V   +    +RGF ++ + +   A  
Sbjct: 189 KNRLFIGNIPRSWGEKDLKKVVTDIGPGVTAVELVKDMKNISNNRGFAFIDYHNNQCAEY 248

Query: 59  --KNVLSIEHNLGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG 116
             + ++S    LG+    V  A PK    +   +V  +++  +P +VT+   +  FE +G
Sbjct: 249 GRQKMMSPSFKLGDNSPTVSWADPKNSDSSASSQVKAVYVKNLPKNVTQEQLKKLFEHHG 308

Query: 117 DITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET--HELEGSTVVVDRATPKED 171
            IT + +P  +  +    IGF+ +A   +    +K T  +EL+G  +    A P+ D
Sbjct: 309 KITKVVLPPPKSGQEKNRIGFVHFAERSNAMKALKNTERYELDGQNLECSLAKPQAD 365


>Medtr4g052940.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr4:19205591-19210680 | 20130731
          Length = 504

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 137/360 (38%), Gaps = 81/360 (22%)

Query: 8   VLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIEHN 67
           V GIP +  ++ LKE+  + GE+    +MK +    ++GF +VT+ +V+ A   +   +N
Sbjct: 114 VGGIPLDAKSEDLKEFCERIGEVVQVRIMKGKDASENKGFAFVTYRNVELASKAIEELNN 173

Query: 68  LGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG-DITDLYMPKD 126
              +  ++K +T + +        NR+FI  IP S  E   +      G  +T + + KD
Sbjct: 174 TEFKGRKIKCSTSQAK--------NRLFIGNIPRSWGEKDLKKVVTDIGPGVTAVELVKD 225

Query: 127 QRS-KTHRGIGFITYANADSVE----NLMKETHELEGSTVVVDRATPKEDDFKPIXXXXX 181
            ++   +RG  FI Y N    E     +M  + +L  ++  V  A PK  D         
Sbjct: 226 MKNISNNRGFAFIDYHNNQCAEYGRQKMMSPSFKLGDNSPTVSWADPKNSDS-------- 277

Query: 182 XXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIFVGHLP 241
                              SA+++  A                          ++V +LP
Sbjct: 278 -------------------SASSQVKA--------------------------VYVKNLP 292

Query: 242 QEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARRP--HEICG 299
           +  T E L++ F   G I  V +P           GFV FAE   A +  +    +E+ G
Sbjct: 293 KNVTQEQLKKLFEHHGKITKVVLPPPKSGQEKNRIGFVHFAERSNAMKALKNTERYELDG 352

Query: 300 HQVAIDSATPLDD-----AGPSGNFMLNSMDSFGGFGGPVRPYGRMYGSLDYDDWGYGVP 354
             +    A P  D     +      +L S     G+G    PYG +         GYG P
Sbjct: 353 QNLECSLAKPQADQKAVVSNTQTQGLLPSYPPPVGYGLVGNPYGAL-------GAGYGAP 405



 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 8/177 (4%)

Query: 3   QRKLVVLGIPWEVDTDGLKEYMSKFGELEDCI--VMKERATGRSRGFGYVTFTSVDDA-- 58
           + +L +  IP       LK+ ++  G     +  V   +    +RGF ++ + +   A  
Sbjct: 189 KNRLFIGNIPRSWGEKDLKKVVTDIGPGVTAVELVKDMKNISNNRGFAFIDYHNNQCAEY 248

Query: 59  --KNVLSIEHNLGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG 116
             + ++S    LG+    V  A PK    +   +V  +++  +P +VT+   +  FE +G
Sbjct: 249 GRQKMMSPSFKLGDNSPTVSWADPKNSDSSASSQVKAVYVKNLPKNVTQEQLKKLFEHHG 308

Query: 117 DITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET--HELEGSTVVVDRATPKED 171
            IT + +P  +  +    IGF+ +A   +    +K T  +EL+G  +    A P+ D
Sbjct: 309 KITKVVLPPPKSGQEKNRIGFVHFAERSNAMKALKNTERYELDGQNLECSLAKPQAD 365


>Medtr7g088140.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:34304385-34297881 | 20130731
          Length = 490

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 16/179 (8%)

Query: 4   RKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLS 63
           RK+ V G+ W+  +  L    S++GE+EDC  + ++ +G+S+G+G++ F     A+N L 
Sbjct: 127 RKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALK 186

Query: 64  -IEHNLGNRMLEVKVAT--PKEEMKAPVKKV------------NRIFIARIPPSVTEATF 108
             +  +GNRM   ++A+  P ++                     +I+I+ + P +     
Sbjct: 187 EPQKKIGNRMTACQLASIGPVQQTPVVAAAPAPLVVAGSEYTQRKIYISNVGPELDAQKL 246

Query: 109 RSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETH-ELEGSTVVVDRA 166
              F ++G+I +  +  D+ +   +G     Y +A+S    ++E H E EG  +   +A
Sbjct: 247 FGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKA 305


>Medtr7g088140.5 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:34304385-34297914 | 20130731
          Length = 490

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 16/179 (8%)

Query: 4   RKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLS 63
           RK+ V G+ W+  +  L    S++GE+EDC  + ++ +G+S+G+G++ F     A+N L 
Sbjct: 127 RKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALK 186

Query: 64  -IEHNLGNRMLEVKVAT--PKEEMKAPVKKV------------NRIFIARIPPSVTEATF 108
             +  +GNRM   ++A+  P ++                     +I+I+ + P +     
Sbjct: 187 EPQKKIGNRMTACQLASIGPVQQTPVVAAAPAPLVVAGSEYTQRKIYISNVGPELDAQKL 246

Query: 109 RSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETH-ELEGSTVVVDRA 166
              F ++G+I +  +  D+ +   +G     Y +A+S    ++E H E EG  +   +A
Sbjct: 247 FGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKA 305


>Medtr7g088140.4 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:34304385-34297914 | 20130731
          Length = 490

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 16/179 (8%)

Query: 4   RKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLS 63
           RK+ V G+ W+  +  L    S++GE+EDC  + ++ +G+S+G+G++ F     A+N L 
Sbjct: 127 RKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALK 186

Query: 64  -IEHNLGNRMLEVKVAT--PKEEMKAPVKKV------------NRIFIARIPPSVTEATF 108
             +  +GNRM   ++A+  P ++                     +I+I+ + P +     
Sbjct: 187 EPQKKIGNRMTACQLASIGPVQQTPVVAAAPAPLVVAGSEYTQRKIYISNVGPELDAQKL 246

Query: 109 RSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETH-ELEGSTVVVDRA 166
              F ++G+I +  +  D+ +   +G     Y +A+S    ++E H E EG  +   +A
Sbjct: 247 FGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKA 305


>Medtr7g088140.3 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:34304385-34297881 | 20130731
          Length = 490

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 16/179 (8%)

Query: 4   RKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLS 63
           RK+ V G+ W+  +  L    S++GE+EDC  + ++ +G+S+G+G++ F     A+N L 
Sbjct: 127 RKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALK 186

Query: 64  -IEHNLGNRMLEVKVAT--PKEEMKAPVKKV------------NRIFIARIPPSVTEATF 108
             +  +GNRM   ++A+  P ++                     +I+I+ + P +     
Sbjct: 187 EPQKKIGNRMTACQLASIGPVQQTPVVAAAPAPLVVAGSEYTQRKIYISNVGPELDAQKL 246

Query: 109 RSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETH-ELEGSTVVVDRA 166
              F ++G+I +  +  D+ +   +G     Y +A+S    ++E H E EG  +   +A
Sbjct: 247 FGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKA 305


>Medtr7g088140.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr7:34304246-34300290 | 20130731
          Length = 492

 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 16/179 (8%)

Query: 4   RKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLS 63
           RK+ V G+ W+  +  L    S++GE+EDC  + ++ +G+S+G+G++ F     A+N L 
Sbjct: 127 RKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALK 186

Query: 64  -IEHNLGNRMLEVKVAT--PKEEMKAPVKKV------------NRIFIARIPPSVTEATF 108
             +  +GNRM   ++A+  P ++                     +I+I+ + P +     
Sbjct: 187 EPQKKIGNRMTACQLASIGPVQQTPVVAAAPAPLVVAGSEYTQRKIYISNVGPELDAQKL 246

Query: 109 RSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETH-ELEGSTVVVDRA 166
              F ++G+I +  +  D+ +   +G     Y +A+S    ++E H E EG  +   +A
Sbjct: 247 FGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKA 305


>Medtr4g052940.4 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr4:19205591-19210680 | 20130731
          Length = 354

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 111/282 (39%), Gaps = 67/282 (23%)

Query: 8   VLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIEHN 67
           V GIP +  ++ LKE+  + GE+    +MK +    ++GF +VT+ +V+ A   +   +N
Sbjct: 114 VGGIPLDAKSEDLKEFCERIGEVVQVRIMKGKDASENKGFAFVTYRNVELASKAIEELNN 173

Query: 68  LGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG-DITDLYMPKD 126
              +  ++K +T + +        NR+FI  IP S  E   +      G  +T + + KD
Sbjct: 174 TEFKGRKIKCSTSQAK--------NRLFIGNIPRSWGEKDLKKVVTDIGPGVTAVELVKD 225

Query: 127 QRS-KTHRGIGFITYANADSVE----NLMKETHELEGSTVVVDRATPKEDDFKPIXXXXX 181
            ++   +RG  FI Y N    E     +M  + +L  ++  V  A PK  D         
Sbjct: 226 MKNISNNRGFAFIDYHNNQCAEYGRQKMMSPSFKLGDNSPTVSWADPKNSDS-------- 277

Query: 182 XXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIFVGHLP 241
                              SA+++  A                          ++V +LP
Sbjct: 278 -------------------SASSQVKA--------------------------VYVKNLP 292

Query: 242 QEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAE 283
           +  T E L++ F   G I  V +P           GFV FAE
Sbjct: 293 KNVTQEQLKKLFEHHGKITKVVLPPPKSGQEKNRIGFVHFAE 334



 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 6/131 (4%)

Query: 34  IVMKERATGRSRGFGYVTFTSVDDA----KNVLSIEHNLGNRMLEVKVATPKEEMKAPVK 89
           +V   +    +RGF ++ + +   A    + ++S    LG+    V  A PK    +   
Sbjct: 222 LVKDMKNISNNRGFAFIDYHNNQCAEYGRQKMMSPSFKLGDNSPTVSWADPKNSDSSASS 281

Query: 90  KVNRIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENL 149
           +V  +++  +P +VT+   +  FE +G IT + +P  +  +    IGF+ +A   +    
Sbjct: 282 QVKAVYVKNLPKNVTQEQLKKLFEHHGKITKVVLPPPKSGQEKNRIGFVHFAERSNAMKA 341

Query: 150 MKET--HELEG 158
           +K T  +EL+G
Sbjct: 342 LKNTERYELDG 352


>Medtr2g026180.4 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr2:9464335-9461370 | 20130731
          Length = 411

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 65/114 (57%), Gaps = 15/114 (13%)

Query: 72  MLEVKVATPKEEMK-------------APVK-KVNRIFIARIPPSVTEATFRSHFEKYGD 117
            +E K A P+++               AP   +  +IF+  +  +VTE+ F+++F+++G 
Sbjct: 2   QVEAKKAVPRDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLASTVTESDFKNYFDQFGT 61

Query: 118 ITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET-HELEGSTVVVDRATPKE 170
           ITD+ +  D  ++  RG GFITY + ++VE ++ +T HEL G  V V RA PK+
Sbjct: 62  ITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVPKD 115



 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 51/104 (49%), Gaps = 6/104 (5%)

Query: 233 KKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTF-AEDGVADRVA 291
           KKIFVG L    T  D + YF +FG I DV +  D      RGFGF+T+ +E+ V   + 
Sbjct: 36  KKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLH 95

Query: 292 RRPHEICGHQVAIDSATPLDDA-----GPSGNFMLNSMDSFGGF 330
           +  HE+ G  V +  A P D +     G  G F   +M   G F
Sbjct: 96  KTFHELNGKMVEVKRAVPKDLSPSPSRGQLGGFSYGTMSRVGSF 139



 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           +  +K+ V G+   V     K Y  +FG + D +VM +  T R RGFG++T+ S +  + 
Sbjct: 33  IRTKKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEK 92

Query: 61  VL-SIEHNLGNRMLEVKVATPKEEMKAPVK 89
           VL    H L  +M+EVK A PK+   +P +
Sbjct: 93  VLHKTFHELNGKMVEVKRAVPKDLSPSPSR 122


>Medtr5g088220.3 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr5:38253257-38251764 | 20130731
          Length = 497

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 81/172 (47%), Gaps = 9/172 (5%)

Query: 4   RKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLS 63
           RK+ V G+ W+   + L    SK+GE+EDC  + ++A+G+S+G+ ++ F      +  L 
Sbjct: 165 RKIFVHGLGWDATAETLTTTFSKYGEIEDCKAVTDKASGKSKGYAFILFKHRTGCRRALK 224

Query: 64  IEHN-LGNRMLEVKVATPKEEMKAPVKKVN-------RIFIARIPPSVTEATFRSHFEKY 115
                +GNR    ++A+       P            +IF++ +   +        F+++
Sbjct: 225 QPQKVIGNRTTSCQLASAGPVPAPPPNAPPVSEYTQRKIFVSNVSSDIDPQKLLEFFKQF 284

Query: 116 GDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETHEL-EGSTVVVDRA 166
           G++ D  +  D+ +   +G     Y   +S +  ++E +++ EG T+   +A
Sbjct: 285 GEVDDGPLGLDKATGKPKGFALFVYKTVESAKKALEEPNKVFEGHTLYCQKA 336


>Medtr5g088220.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr5:38253257-38251764 | 20130731
          Length = 497

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 81/172 (47%), Gaps = 9/172 (5%)

Query: 4   RKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLS 63
           RK+ V G+ W+   + L    SK+GE+EDC  + ++A+G+S+G+ ++ F      +  L 
Sbjct: 165 RKIFVHGLGWDATAETLTTTFSKYGEIEDCKAVTDKASGKSKGYAFILFKHRTGCRRALK 224

Query: 64  IEHN-LGNRMLEVKVATPKEEMKAPVKKVN-------RIFIARIPPSVTEATFRSHFEKY 115
                +GNR    ++A+       P            +IF++ +   +        F+++
Sbjct: 225 QPQKVIGNRTTSCQLASAGPVPAPPPNAPPVSEYTQRKIFVSNVSSDIDPQKLLEFFKQF 284

Query: 116 GDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETHEL-EGSTVVVDRA 166
           G++ D  +  D+ +   +G     Y   +S +  ++E +++ EG T+   +A
Sbjct: 285 GEVDDGPLGLDKATGKPKGFALFVYKTVESAKKALEEPNKVFEGHTLYCQKA 336


>Medtr5g088220.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr5:38253257-38251764 | 20130731
          Length = 497

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 81/172 (47%), Gaps = 9/172 (5%)

Query: 4   RKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLS 63
           RK+ V G+ W+   + L    SK+GE+EDC  + ++A+G+S+G+ ++ F      +  L 
Sbjct: 165 RKIFVHGLGWDATAETLTTTFSKYGEIEDCKAVTDKASGKSKGYAFILFKHRTGCRRALK 224

Query: 64  IEHN-LGNRMLEVKVATPKEEMKAPVKKVN-------RIFIARIPPSVTEATFRSHFEKY 115
                +GNR    ++A+       P            +IF++ +   +        F+++
Sbjct: 225 QPQKVIGNRTTSCQLASAGPVPAPPPNAPPVSEYTQRKIFVSNVSSDIDPQKLLEFFKQF 284

Query: 116 GDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETHEL-EGSTVVVDRA 166
           G++ D  +  D+ +   +G     Y   +S +  ++E +++ EG T+   +A
Sbjct: 285 GEVDDGPLGLDKATGKPKGFALFVYKTVESAKKALEEPNKVFEGHTLYCQKA 336


>Medtr3g075500.1 | 31 kDa ribonucleoprotein | HC |
           chr3:34381451-34378914 | 20130731
          Length = 291

 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 11/176 (6%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           E  KL V   P++VD++ L     + G +E   V+  R T  SRGFG+VT ++V++A++ 
Sbjct: 107 EDAKLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMSTVEEAESA 166

Query: 62  LSI--EHNLGNRMLEVKVATPK-------EEMKAPVKKVNRIFIARIPPSVTEATFRSHF 112
           +     ++   R L V  A+PK       E      + V RI++A +   V  +     F
Sbjct: 167 VEKFNGYDYNGRSLVVNKASPKGSRPERTERAPRTFEPVLRIYVANLAWEVDNSRLEQVF 226

Query: 113 EKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMK--ETHELEGSTVVVDRA 166
            ++G I    +  D+ +   RG GF+T ++   + + +   +   LEG T+ V  A
Sbjct: 227 SEHGKIVSARVVYDRETGRSRGFGFVTMSDETEMNDAIAALDGQSLEGRTIRVSVA 282


>Medtr7g107580.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr7:43890585-43885643 | 20130731
          Length = 434

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 13/168 (7%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           E  KL V  +P  +  D L     +F  +++  ++K++AT  SRG  +V   S D+A   
Sbjct: 14  ESVKLFVGQVPKHMTEDELLTLFKEFAIVDEVNIIKDKATRASRGCCFVICPSRDEADKA 73

Query: 62  LSIEHNL-----GNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG 116
           ++  HN       +  L+VK A  + E     +  +++FI  +P +++E    + F KYG
Sbjct: 74  VNACHNKKTLPGASSPLQVKYADGELE-----RLEHKLFIGMLPKNISEVEVSALFSKYG 128

Query: 117 DITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET---HELEGSTV 161
            I DL + +  +  +  G  F+ Y   +     ++     H++EGS+V
Sbjct: 129 TIKDLQILRGSQQTSKVGCAFLKYETKEQALAALEAINGKHKMEGSSV 176


>Medtr7g010360.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           LC | chr7:2533493-2542856 | 20130731
          Length = 752

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/367 (21%), Positives = 140/367 (38%), Gaps = 85/367 (23%)

Query: 3   QRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVL 62
           + ++ V GIP +  T+ LKE+    GE+    + K +    +RGF +VT+ S++ A   +
Sbjct: 349 KSEVYVGGIPLDAKTEDLKEFCECIGEVVQVRIFKGKDASENRGFAFVTYRSIELASKAI 408

Query: 63  SIEHNLGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGD-ITDL 121
              +N   +  ++K +  K + K+      R+FI  IP S  E   +      G  +T +
Sbjct: 409 KELNNTEFKAGKIKCS--KSQAKS------RLFIGNIPRSWGEKDLKKVVSDIGPGVTAV 460

Query: 122 YMPKDQRS-KTHRGIGFITYANADSVE----NLMKETHELEGSTVVVDRATPKEDDFKPI 176
            + KD ++   +RG  FI Y N    E     +   + +L  +   V+ A PK       
Sbjct: 461 ELIKDMKNISNNRGYAFIDYHNNQCAEYSRQKMTSPSFKLGDNFPTVNWAEPK------- 513

Query: 177 XXXXXXXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIF 236
                               NA  SA+++                           K+++
Sbjct: 514 --------------------NADSSASSQV--------------------------KEVY 527

Query: 237 VGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARRPHE 296
           V +LP+  T E L++ F   G I  V +P           GFV FAE   A +  +   +
Sbjct: 528 VKNLPKNVTKEQLKKLFEHHGKITKVVLPPPKPGQEKNRIGFVHFAERSNAMKALKNTEK 587

Query: 297 ICGHQVAIDSATPLDDAGPSGNFMLNSMDSFG---------GFGGPVRPYGRMYGSLDYD 347
                  ++ +     A P    +++++ + G         G+G    PYG +       
Sbjct: 588 YVLDGQILECSLAKQQADPKA--VVSNIQTQGSLPRYPPHVGYGLDGNPYGVLGA----- 640

Query: 348 DWGYGVP 354
             GYG P
Sbjct: 641 --GYGAP 645


>Medtr1g045510.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr1:17072567-17075712 | 20130731
          Length = 285

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 15/175 (8%)

Query: 5   KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSI 64
           KL    +P+ VD+  L   + ++G  E   V+ +R TG+SRGF +VT + V+D   V+  
Sbjct: 114 KLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNAVI-- 171

Query: 65  EHNLG-----NRMLEVKVA---TPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG 116
             NL       R L V  +    PKE +    +   ++F+  +  +VT  +    F+++G
Sbjct: 172 -QNLDGKEFMGRTLRVNFSDKPKPKEPLYPETEY--KLFVGNLAWTVTSESLTQAFQEHG 228

Query: 117 DITDLYMPKDQRSKTHRGIGFITYANADSVENLMK--ETHELEGSTVVVDRATPK 169
            +    +  D  +   RG GF++YA    ++  +   +  ELEG T+ V  A  K
Sbjct: 229 TVVGARVLFDGETGKSRGYGFVSYATKSEMDTALAIMDNVELEGRTLRVSLAQGK 283


>Medtr7g107580.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr7:43890650-43885583 | 20130731
          Length = 433

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 14/168 (8%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           E  KL V  +P  +  D L     +F  +++  ++K++AT  SRG  +V   S D+A   
Sbjct: 14  ESVKLFVGQVPKHMTEDELLTLFKEFAIVDEVNIIKDKATRASRGCCFVICPSRDEADKA 73

Query: 62  LSIEHNL-----GNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG 116
           ++  HN       +  L+VK A  + E     +  +++FI  +P +++E    + F KYG
Sbjct: 74  VNACHNKKTLPGASSPLQVKYADGELE-----RLEHKLFIGMLPKNISEVEVSALFSKYG 128

Query: 117 DITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET---HELEGSTV 161
            I DL + +  + +T +G  F+ Y   +     ++     H++EGS+V
Sbjct: 129 TIKDLQILRGSQ-QTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 175


>Medtr7g107580.3 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr7:43890650-43885583 | 20130731
          Length = 362

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 14/168 (8%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           E  KL V  +P  +  D L     +F  +++  ++K++AT  SRG  +V   S D+A   
Sbjct: 14  ESVKLFVGQVPKHMTEDELLTLFKEFAIVDEVNIIKDKATRASRGCCFVICPSRDEADKA 73

Query: 62  LSIEHNL-----GNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYG 116
           ++  HN       +  L+VK A  + E     +  +++FI  +P +++E    + F KYG
Sbjct: 74  VNACHNKKTLPGASSPLQVKYADGELE-----RLEHKLFIGMLPKNISEVEVSALFSKYG 128

Query: 117 DITDLYMPKDQRSKTHRGIGFITYANADSVENLMKET---HELEGSTV 161
            I DL + +  + +T +G  F+ Y   +     ++     H++EGS+V
Sbjct: 129 TIKDLQILRGSQ-QTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 175


>Medtr7g013730.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr7:3986546-3983001 | 20130731
          Length = 253

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           M   KL + G+ +  D  GL+E  S++G++ D  ++ +R TGRSRGFG++TF + ++A +
Sbjct: 37  MSSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASS 96

Query: 61  VLSIEHN--LGNRMLEVKVATPK 81
            L    N  L  R + V  AT +
Sbjct: 97  ALQAMDNKELDGRTVRVNYATER 119



 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 2/98 (2%)

Query: 74  EVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHR 133
           ++ ++TP            ++FI  +  S  E   R  F +YGD+ D  +  D+ +   R
Sbjct: 22  DLSMSTPSLFQAIRSMSSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSR 81

Query: 134 GIGFITYANADSVENLMK--ETHELEGSTVVVDRATPK 169
           G GFIT+A ++   + ++  +  EL+G TV V+ AT +
Sbjct: 82  GFGFITFATSEEASSALQAMDNKELDGRTVRVNYATER 119


>Medtr7g013730.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr7:3986488-3983001 | 20130731
          Length = 253

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           M   KL + G+ +  D  GL+E  S++G++ D  ++ +R TGRSRGFG++TF + ++A +
Sbjct: 37  MSSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASS 96

Query: 61  VLSIEHN--LGNRMLEVKVATPK 81
            L    N  L  R + V  AT +
Sbjct: 97  ALQAMDNKELDGRTVRVNYATER 119



 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 2/98 (2%)

Query: 74  EVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHR 133
           ++ ++TP            ++FI  +  S  E   R  F +YGD+ D  +  D+ +   R
Sbjct: 22  DLSMSTPSLFQAIRSMSSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSR 81

Query: 134 GIGFITYANADSVENLMK--ETHELEGSTVVVDRATPK 169
           G GFIT+A ++   + ++  +  EL+G TV V+ AT +
Sbjct: 82  GFGFITFATSEEASSALQAMDNKELDGRTVRVNYATER 119


>Medtr4g104470.1 | 31 kDa ribonucleoprotein | HC |
           chr4:43224367-43221650 | 20130731
          Length = 300

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 10/149 (6%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTS---VDDA 58
           E  K+ V  +P++VD++ L +   + G +E   V+  R T RSRGFG+VT ++   V+ A
Sbjct: 120 EDLKIFVGNLPFDVDSEKLAQLFEQSGTVEIAEVIYNRDTDRSRGFGFVTMSTSEEVERA 179

Query: 59  KNVLSIEHNLGNRMLEVKVATPK--EEMKAPVKKVN---RIFIARIPPSVTEATFRSHFE 113
            N  S    L  R+L V  A P+    ++ P +  N   R ++  +P  V  ++    F 
Sbjct: 180 VNKFS-GFELDGRLLTVNKAAPRGTPRLRQP-RTFNSGLRAYVGNLPWDVDNSSLEQLFS 237

Query: 114 KYGDITDLYMPKDQRSKTHRGIGFITYAN 142
           ++G +    +  D+ +   RG GF+T +N
Sbjct: 238 EHGKVESAQVVYDRETGRSRGFGFVTMSN 266



 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 8   VLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIE-- 65
           V  +PW+VD   L++  S+ G++E   V+ +R TGRSRGFG+VT ++  +  + ++    
Sbjct: 220 VGNLPWDVDNSSLEQLFSEHGKVESAQVVYDRETGRSRGFGFVTMSNEAEMNDAIAALDG 279

Query: 66  HNLGNRMLEVKVA 78
            +   R + V VA
Sbjct: 280 QSFNGRAIRVNVA 292


>Medtr3g075500.2 | 31 kDa ribonucleoprotein | HC |
           chr3:34381440-34379306 | 20130731
          Length = 271

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           E  KL V   P++VD++ L     + G +E   V+  R T  SRGFG+VT ++V++A++ 
Sbjct: 107 EDAKLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMSTVEEAESA 166

Query: 62  LSI--EHNLGNRMLEVKVATPK-------EEMKAPVKKVNRIFIARIPPSVTEATFRSHF 112
           +     ++   R L V  A+PK       E      + V RI++A +   V  +     F
Sbjct: 167 VEKFNGYDYNGRSLVVNKASPKGSRPERTERAPRTFEPVLRIYVANLAWEVDNSRLEQVF 226

Query: 113 EKYGDITDLYMPKDQRSKTHRGIGFITYAN 142
            ++G I    +  D+ +   RG GF+T ++
Sbjct: 227 SEHGKIVSARVVYDRETGRSRGFGFVTMSD 256


>Medtr1g061870.1 | polyadenylate-binding plant protein, putative |
           HC | chr1:27029234-27025443 | 20130731
          Length = 522

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/284 (21%), Positives = 115/284 (40%), Gaps = 54/284 (19%)

Query: 6   LVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIE 65
           + V  +   +D  GL +   K+G +    + +    G+S+GFGY+ F S +++ NV   +
Sbjct: 105 VFVKNLAASIDNVGLHDLFQKYGNILSSKIARSE-DGKSKGFGYIQFDS-EESANVAIQK 162

Query: 66  HN---LGNRMLEVKVATPKEEMKAPV--KKVNRIFIARIPPSVTEATFRSHFEKYGDITD 120
            N   + ++ + V     K E   P    K   +++  + P VTE      F  +G I  
Sbjct: 163 MNGSTVRDKQIYVGKFIRKSERSLPDLDAKFTNLYVKNLDPVVTEKHLGEKFSSFGKIVS 222

Query: 121 LYMPKDQRSKTHRGIGFITYANADSVENLMK--ETHELEGSTVVVDRATPKEDDFKPIXX 178
           L + KD+  ++ +G GF+ Y + D     M+  +  +     + V RA  K +  + +  
Sbjct: 223 LAIKKDENGQS-KGFGFVNYDSPDDARRAMEAMDGSQFGSKILYVARAQKKVEREQIL-- 279

Query: 179 XXXXXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIFVG 238
                            ++ ++    ++                        +G  I+V 
Sbjct: 280 -----------------HHLFVEKGLKH------------------------MGSNIYVK 298

Query: 239 HLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFA 282
           ++      E+LR +F   G +L   + RD K +  +GFGFV F+
Sbjct: 299 NIDTSVGDEELRDHFSACGEVLSAKVMRDDKGTS-KGFGFVCFS 341



 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 16/166 (9%)

Query: 20  LKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIE--HNLGNRMLEVKV 77
           L E  S FG++   + +K+   G+S+GFG+V + S DDA+  +        G+++L V  
Sbjct: 210 LGEKFSSFGKIVS-LAIKKDENGQSKGFGFVNYDSPDDARRAMEAMDGSQFGSKILYVAR 268

Query: 78  ATPKEEMKAPVKKV----------NRIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQ 127
           A  K E +  +  +          + I++  I  SV +   R HF   G++    + +D 
Sbjct: 269 AQKKVEREQILHHLFVEKGLKHMGSNIYVKNIDTSVGDEELRDHFSACGEVLSAKVMRDD 328

Query: 128 RSKTHRGIGFITYANADSVENLMK--ETHELEGSTVVVDRATPKED 171
           +  T +G GF+ ++        M         G  + VD A  KED
Sbjct: 329 KG-TSKGFGFVCFSTVVEAFKSMSCFNGCMFHGKPLYVDFAQKKED 373



 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 20  LKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIEHNLGNRMLEVKVAT 79
           L +  S+F  L    V K+ ATG+S  +GYV  +S  +A   + ++++       ++V  
Sbjct: 31  LYKAFSEFNTLISARVCKDSATGKSLCYGYVNLSSHQEAIRAIELKNHSSLNGKVIRVMW 90

Query: 80  PKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFIT 139
              +  A       +F+  +  S+        F+KYG+I    + + +  K+ +G G+I 
Sbjct: 91  LSRDADARKSGKGNVFVKNLAASIDNVGLHDLFQKYGNILSSKIARSEDGKS-KGFGYIQ 149

Query: 140 YANADSVENLMKETHELEGSTV 161
           +   DS E+      ++ GSTV
Sbjct: 150 F---DSEESANVAIQKMNGSTV 168


>Medtr4g109540.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr4:45527069-45523373 | 20130731
          Length = 268

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 2/79 (2%)

Query: 5   KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSI 64
           KL + G+ +  D + L+E  S++GE+ D  ++ +R TGRSRGFG++TF SV++A + +  
Sbjct: 43  KLFIGGVSYSTDENSLREAFSRYGEVLDARIIMDRETGRSRGFGFITFNSVEEASSAIQA 102

Query: 65  --EHNLGNRMLEVKVATPK 81
               +L  R + V  A  +
Sbjct: 103 LDGQDLHGRRVRVNYANER 121


>Medtr3g084040.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr3:37961723-37963823 | 20130731
          Length = 146

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 1/83 (1%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           M   KL + G+ + VD   L++  + +G++ +  V+ +R TGRSRGFG+V FTS + A +
Sbjct: 33  MSSSKLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEESATS 92

Query: 61  VLSIE-HNLGNRMLEVKVATPKE 82
            LS++  +L  R + V  A  ++
Sbjct: 93  ALSMDGQDLNGRNIRVSYANDRQ 115


>Medtr4g109540.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr4:45527062-45523373 | 20130731
          Length = 276

 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 2/78 (2%)

Query: 6   LVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSI- 64
           L V G+ +  D + L+E  S++GE+ D  ++ +R TGRSRGFG++TF SV++A + +   
Sbjct: 52  LSVAGVSYSTDENSLREAFSRYGEVLDARIIMDRETGRSRGFGFITFNSVEEASSAIQAL 111

Query: 65  -EHNLGNRMLEVKVATPK 81
              +L  R + V  A  +
Sbjct: 112 DGQDLHGRRVRVNYANER 129


>Medtr7g117495.1 | RNA-binding (RRM/RBD/RNP motif) family protein
          | HC | chr7:48649613-48651189 | 20130731
          Length = 256

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 38/58 (65%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVL 62
          K+ V G+ WE   D L+E+  K+G++ + +++ ++ TGRS+G+G+VTF   D AK   
Sbjct: 19 KVFVGGLAWETPKDTLREHFEKYGDILEAVIISDKVTGRSKGYGFVTFKDADSAKKAC 76


>Medtr7g117495.2 | RNA-binding (RRM/RBD/RNP motif) family protein
          | HC | chr7:48649576-48651271 | 20130731
          Length = 253

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 38/58 (65%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVL 62
          K+ V G+ WE   D L+E+  K+G++ + +++ ++ TGRS+G+G+VTF   D AK   
Sbjct: 19 KVFVGGLAWETPKDTLREHFEKYGDILEAVIISDKVTGRSKGYGFVTFKDADSAKKAC 76


>Medtr4g035310.2 | RNA recognition motif, a.k.a. RRM, RBD protein
          | HC | chr4:12141158-12149871 | 20130731
          Length = 272

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 38/54 (70%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDA 58
          K+ V G+ WE   + +K+Y  +FGE+ + +V+ ++ATGRS+G+G+VTF   D A
Sbjct: 17 KVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPDAA 70


>Medtr3g084040.2 | RNA-binding (RRM/RBD/RNP motif) family protein
          | HC | chr3:37961794-37963766 | 20130731
          Length = 105

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 42/65 (64%)

Query: 1  MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
          M   KL + G+ + VD   L++  + +G++ +  V+ +R TGRSRGFG+V FTS + A +
Sbjct: 33 MSSSKLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEESATS 92

Query: 61 VLSIE 65
           LS++
Sbjct: 93 ALSMD 97


>Medtr4g035310.1 | RNA recognition motif, a.k.a. RRM, RBD protein
          | HC | chr4:12141158-12149871 | 20130731
          Length = 267

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 38/54 (70%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDA 58
          K+ V G+ WE   + +K+Y  +FGE+ + +V+ ++ATGRS+G+G+VTF   D A
Sbjct: 17 KVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPDAA 70


>Medtr7g102730.1 | polyadenylate-binding protein | HC |
           chr7:41652502-41656607 | 20130731
          Length = 629

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 20/184 (10%)

Query: 6   LVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIE 65
           L +  +  ++    L+E  S FG++    V K+ + G S+GFG+V F + +DAK  +   
Sbjct: 191 LYMKNLDLDISETLLREKFSSFGKIISLAVAKD-SNGMSKGFGFVNFDNPEDAKRAMETM 249

Query: 66  H--NLGNRMLEVKVATPKEEMKAPVK--------------KVNRIFIARIPPSVTEATFR 109
           +   LG+++L V  A  K E +  +               K + I++  I  +V++   R
Sbjct: 250 NGLQLGSKILYVARAQKKAEREQILHQQFEEKRKEQVLKYKGSNIYVKNIDDNVSDEGLR 309

Query: 110 SHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETH--ELEGSTVVVDRAT 167
            HF   G IT   + +D +  + +G GF+ ++  +     +   H     G  + V  A 
Sbjct: 310 DHFSVCGTITSAKIMRDDKGIS-KGFGFVCFSTPEEANKAVNSFHGFMFHGKPLYVSLAQ 368

Query: 168 PKED 171
            KED
Sbjct: 369 RKED 372



 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 10/173 (5%)

Query: 6   LVVLGIPWEVDTDGLKEYMSKFGE-LEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSI 64
           + V  +   +D  GL++   KFG  L   +VM E   G+S+G+G+V F + + A   +  
Sbjct: 100 VFVKNLAESIDNSGLEDMFKKFGNILSSKVVMSE--DGKSKGYGFVQFETEESANAAIER 157

Query: 65  EHN--LGNRMLEVKVATPKEE--MKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGDITD 120
            +   +G++ + V     K +     P  +   +++  +   ++E   R  F  +G I  
Sbjct: 158 LNGYLVGDKQIYVGKFVKKSDRISSGPDTRYTNLYMKNLDLDISETLLREKFSSFGKIIS 217

Query: 121 LYMPKDQRSKTHRGIGFITYANADSVENLMKETHELE-GSTVV-VDRATPKED 171
           L + KD    + +G GF+ + N +  +  M+  + L+ GS ++ V RA  K +
Sbjct: 218 LAVAKDSNGMS-KGFGFVNFDNPEDAKRAMETMNGLQLGSKILYVARAQKKAE 269


>Medtr4g070140.1 | RNA-binding (RRM/RBD/RNP motif) family protein
          | LC | chr4:26401562-26402849 | 20130731
          Length = 190

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 33/48 (68%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTF 52
          +  V G+ W  D+  L++  SKFGE+ D  V+ +R TGRSRGFG+VTF
Sbjct: 9  RCFVGGLAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTF 56


>Medtr3g027140.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr3:8413608-8404220 | 20130731
          Length = 235

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 15/177 (8%)

Query: 4   RKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLS 63
           RKL V  IP  V  D L++ + + G +E   VM ++ + RSR F +VT  +V+DA N  +
Sbjct: 60  RKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDA-NAAA 118

Query: 64  IEHN---LGNRMLEVKVA-TPKEEMKAPVKKVN--------RIFIARIPPSVTEATFRSH 111
            + N   +G R ++V +   P      PV+           ++++  +  +VT  + +  
Sbjct: 119 EKLNGTEIGGREIKVNITEKPLTTEGLPVQAGESTFVDSPYKVYVGNLAKNVTSDSLKKF 178

Query: 112 FEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETHE--LEGSTVVVDRA 166
           F + G+     + +   +    G GF+T+++ + VE  +   +   LEG  + V++A
Sbjct: 179 FSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLEGQKIRVNKA 235


>Medtr4g086600.1 | polyadenylate-binding protein RBP47B | HC |
           chr4:33938062-33942519 | 20130731
          Length = 454

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 106/285 (37%), Gaps = 49/285 (17%)

Query: 15  VDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIEHNLGNRML- 73
           +D   L    +  GE+    V++ + TG+S G+G+V F +   A+ VL    N    M+ 
Sbjct: 127 MDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVL---QNFNGTMMP 183

Query: 74  ------EVKVAT------PKEEMKAPVKKVNRIFIARIPPSVTEATFRSHF-EKYGDITD 120
                  +  AT        E   +       +F+  +   VT+A  +  F  K+  I  
Sbjct: 184 NTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQETFASKFSSIKG 243

Query: 121 LYMPKDQRSKTHRGIGFITYANADSVENLMKETHELEGST--VVVDRATPKEDDFKPIXX 178
             +  D  +   +G GF+ + +       M E + +  S+  + V  ATPK+    P   
Sbjct: 244 AKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVATPKKTYGNP--- 300

Query: 179 XXXXXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIFVG 238
                               Y S     A  G    + N     G           IFVG
Sbjct: 301 ------------------QQYSSQAVVLAGGGG---HSNGAMAQGSQSEGDSNNTTIFVG 339

Query: 239 HLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAE 283
            L  + + EDLRQ F +FG ++ V IP        +G GFV  A+
Sbjct: 340 GLDSDISDEDLRQPFLQFGDVISVKIPVG------KGCGFVQLAD 378


>Medtr2g097960.1 | polyadenylate-binding protein RBP47B | HC |
           chr2:41853094-41847353 | 20130731
          Length = 428

 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 124/316 (39%), Gaps = 45/316 (14%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           E R L +  + + VD + L    S  GE+    +++ + TG+  G+G++ F S   A+ V
Sbjct: 13  EVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERV 72

Query: 62  LSIEHNLGNRM------LEVKVAT-PKEEMKAPVKKVNRIFIARIPPSVT----EATFRS 110
           L   +  G +M        +  A+    E +      + IF+  + P VT    + TFR+
Sbjct: 73  LQTYN--GTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRT 130

Query: 111 HFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETHELEGST--VVVDRATP 168
           H   YG +    +  D  +   +G GF+ +++       M E + +  ST  + +  ATP
Sbjct: 131 H---YGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRISAATP 187

Query: 169 KEDDFKPIXXXXXXXXXXXXXXXXXXAYNAY-ISATTRYAALGAPTLYDNPGSVYGRGEP 227
           K+                            Y + A T       P  YD   +       
Sbjct: 188 KK------TTGYQQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTVPPEYDVNNTT------ 235

Query: 228 AREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVA 287
                  I+VG+L    + E+L+Q F +FG I+ V      K    +  GFV F     A
Sbjct: 236 -------IYVGNLDLNVSEEELKQNFLQFGEIVSV------KVHPGKACGFVQFGARASA 282

Query: 288 DRVARRPH-EICGHQV 302
           +   ++   +I G QV
Sbjct: 283 EEAIQKMQGKILGQQV 298


>Medtr3g092490.2 | RNA-binding (RRM/RBD/RNP motif) family protein
          | HC | chr3:42251226-42253109 | 20130731
          Length = 251

 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 36/54 (66%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDA 58
          K+ V G+ WE   D LK Y  +FG++ + +V+ +R TG+S+G+G+VTF   + A
Sbjct: 27 KIFVGGLAWETKRDTLKRYFDQFGDILEAVVITDRTTGKSKGYGFVTFKDPNSA 80


>Medtr3g092490.1 | RNA-binding (RRM/RBD/RNP motif) family protein
          | HC | chr3:42251169-42253164 | 20130731
          Length = 250

 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 36/54 (66%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDA 58
          K+ V G+ WE   D LK Y  +FG++ + +V+ +R TG+S+G+G+VTF   + A
Sbjct: 27 KIFVGGLAWETKRDTLKRYFDQFGDILEAVVITDRTTGKSKGYGFVTFKDPNSA 80


>Medtr7g013740.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr7:3990787-3988732 | 20130731
          Length = 148

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
           M   KL V GI +  D  GL+E  +++G++ D  V+ +R  GRS+GFG+VTF + ++A  
Sbjct: 37  MSSAKLYVGGISYSTDDAGLRESFARYGDVLDARVIIDREQGRSKGFGFVTFATSEEASA 96

Query: 61  VLSIEHN--LGNRMLEVKVATPK 81
            L    N  L  R + V  A  +
Sbjct: 97  ALQAMDNQELHGRTVRVNYAQER 119


>Medtr1g019150.1 | polyadenylate-binding protein | HC |
           chr1:5708406-5713691 | 20130731
          Length = 647

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 9/151 (5%)

Query: 15  VDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIEHNL--GNRM 72
           +D   L +  S FG++  C +  +  +G+S+G+G+V F + D A+N +   + +   ++ 
Sbjct: 131 IDHKALHDTFSSFGQIMSCKIATD-GSGQSKGYGFVQFEAEDSAQNAIDKLNGMLINDKQ 189

Query: 73  LEVKVATPKEEMKAPVKKV--NRIFIARIPPSVTEATFRSHFEKYGDITDLYMPKDQRSK 130
           + V     K++    + K   N +++  +  S TE   ++ F  YG IT   + +D   +
Sbjct: 190 VFVGHFLRKQDRDNVLSKTKFNNVYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGR 249

Query: 131 THRGIGFITYANADSVENLMKETHELEGSTV 161
           + +  GF+ + NA   E+  K    L G  V
Sbjct: 250 S-KCFGFVNFENA---EDAAKAVEALNGKKV 276



 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 64/149 (42%), Gaps = 1/149 (0%)

Query: 6   LVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIE 65
           L V  +   V+   L +  ++ G++    V ++ AT RS G+GYV FT+  DA   L + 
Sbjct: 34  LYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARALDVL 93

Query: 66  HNLGNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGDITDLYMPK 125
           +        ++V     +  +       IFI  +  ++        F  +G I    +  
Sbjct: 94  NFTPMNNKSIRVMYSHRDPSSRKSGTANIFIKNLDKTIDHKALHDTFSSFGQIMSCKIAT 153

Query: 126 DQRSKTHRGIGFITYANADSVENLMKETH 154
           D   ++ +G GF+ +   DS +N + + +
Sbjct: 154 DGSGQS-KGYGFVQFEAEDSAQNAIDKLN 181


>Medtr3g101370.1 | polyadenylate-binding protein RBP47C | HC |
           chr3:46662442-46658399 | 20130731
          Length = 420

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 29/165 (17%)

Query: 15  VDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIEHNLG----N 70
            DT  L+ +  K+  ++   V+ +  TGRS+G+G+V F   DD +   ++    G    +
Sbjct: 199 TDTMLLETFSDKYPSVKAAKVVFDANTGRSKGYGFVRFG--DDGERSKALNEMNGVFCSS 256

Query: 71  RMLEVKVATPKEE-------------MKAPVKKVN-RIFIARIPPSVTEATFRSHFEKYG 116
           R + +  ATP++               ++     N  IF+  + PS T    R  F +YG
Sbjct: 257 RAMRIGAATPRKSSGYQQGGQSNGTPSQSDTDSTNTTIFVGGLDPSATAEDLRQPFSQYG 316

Query: 117 DITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETHELEGSTV 161
           +I  + +P        +G GF+ +AN ++ E  ++   +L G+TV
Sbjct: 317 EIVSVKIP------VGKGCGFVQFANRNNAEEALQ---KLNGTTV 352


>Medtr3g092490.3 | RNA-binding (RRM/RBD/RNP motif) family protein
          | HC | chr3:42251169-42253131 | 20130731
          Length = 178

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 36/54 (66%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDA 58
          K+ V G+ WE   D LK Y  +FG++ + +V+ +R TG+S+G+G+VTF   + A
Sbjct: 27 KIFVGGLAWETKRDTLKRYFDQFGDILEAVVITDRTTGKSKGYGFVTFKDPNSA 80


>Medtr3g092490.4 | RNA-binding (RRM/RBD/RNP motif) family protein
          | HC | chr3:42251169-42253131 | 20130731
          Length = 178

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 36/54 (66%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDA 58
          K+ V G+ WE   D LK Y  +FG++ + +V+ +R TG+S+G+G+VTF   + A
Sbjct: 27 KIFVGGLAWETKRDTLKRYFDQFGDILEAVVITDRTTGKSKGYGFVTFKDPNSA 80


>Medtr3g025880.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           LC | chr3:7898677-7894080 | 20130731
          Length = 447

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 39/60 (65%)

Query: 3   QRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVL 62
             KL V GI +  D   L +  SK+G++ D  ++ +R +GRS+GFG+VT+ +V++A + +
Sbjct: 43  NTKLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEASSAI 102


>Medtr3g025880.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           LC | chr3:7898604-7894080 | 20130731
          Length = 447

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 39/60 (65%)

Query: 3   QRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVL 62
             KL V GI +  D   L +  SK+G++ D  ++ +R +GRS+GFG+VT+ +V++A + +
Sbjct: 43  NTKLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEASSAI 102


>Medtr8g092550.1 | CC1-like splicing factor | HC |
           chr8:38688579-38694751 | 20130731
          Length = 567

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 15/181 (8%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           +QR +    +P +     + E+ SK G++ D  ++ +R + RS+G GY+ F         
Sbjct: 200 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMA 259

Query: 62  LSIEHNL------------GNRMLEVKVATPKEEMKAPVKKVNR-IFIARIPPSVTEATF 108
           +++   L              + L    A+    +  P   V+R +++  +  ++TEA  
Sbjct: 260 IALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYGAVDRKLYVGNLHFNMTEANL 319

Query: 109 RSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETHELE--GSTVVVDRA 166
           R  FE +G I  + +P D  +   +G GF+ +A+ +  +       +LE  G T+ V   
Sbjct: 320 REIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSV 379

Query: 167 T 167
           T
Sbjct: 380 T 380


>Medtr5g064120.1 | RNA-binding (RRM/RBD/RNP motif) family protein
          | HC | chr5:26612934-26618708 | 20130731
          Length = 283

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 39/59 (66%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLS 63
          K+ V G+ WE  TD ++ Y  +FG++ + +++ ++ TG+S+G+G+VTF   + A+   +
Sbjct: 17 KVFVGGLAWETPTDEMRTYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACA 75



 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%)

Query: 234 KIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARR 293
           K+FVG L  E  T+++R YF +FG IL+  I  D      +G+GFVTF +   A R    
Sbjct: 17  KVFVGGLAWETPTDEMRTYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACAD 76

Query: 294 PHEI 297
           P+ +
Sbjct: 77  PNPV 80


>Medtr4g122650.1 | flowering time control FCA-like protein | HC |
           chr4:50587410-50576809 | 20130731
          Length = 737

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 8/145 (5%)

Query: 5   KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSI 64
           KL V  +P     + ++    + G + +  ++K+R TG+ +G  ++ + + ++A   +  
Sbjct: 89  KLFVGSVPRTATEEDIRPLFEEHGNVVEVALIKDRKTGQHQGCCFIKYATSEEADQAIRA 148

Query: 65  EHNL-----GNRMLEVKVATPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGDIT 119
            HN      G   ++V+ A  + E    V+   ++F+  +    +       F KYG I 
Sbjct: 149 LHNRHTLPGGVGPIQVRYADGERERLGAVEY--KLFVGSLNKQASVKEVEEVFSKYGRIE 206

Query: 120 DLYMPKDQRSKTHRGIGFITYANAD 144
           D+Y+ +D + K  RG GF+ Y++ D
Sbjct: 207 DVYLMRDDQ-KQSRGCGFVKYSHRD 230



 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 234 KIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARR 293
           K+FVG +P+ AT ED+R  F   G++++V + +D K   H+G  F+ +A    AD+  R 
Sbjct: 89  KLFVGSVPRTATEEDIRPLFEEHGNVVEVALIKDRKTGQHQGCCFIKYATSEEADQAIRA 148

Query: 294 PH 295
            H
Sbjct: 149 LH 150


>Medtr8g024520.1 | RNA-binding (RRM/RBD/RNP motif) family protein
          | HC | chr8:9035953-9039164 | 20130731
          Length = 282

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 34/48 (70%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTF 52
          KL V G+ WE   + ++ Y  +FGE+ + +V+ ++ TGRS+G+G+VTF
Sbjct: 26 KLFVGGLAWETQRETMRMYFEQFGEILEAVVITDKYTGRSKGYGFVTF 73



 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 34/64 (53%)

Query: 234 KIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARR 293
           K+FVG L  E   E +R YF +FG IL+  +  D      +G+GFVTF +   A R  + 
Sbjct: 26  KLFVGGLAWETQRETMRMYFEQFGEILEAVVITDKYTGRSKGYGFVTFKDPEAAIRACQN 85

Query: 294 PHEI 297
           P  +
Sbjct: 86  PSPV 89


>Medtr8g024520.2 | RNA-binding (RRM/RBD/RNP motif) family protein
          | HC | chr8:9035953-9039164 | 20130731
          Length = 280

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 34/48 (70%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTF 52
          KL V G+ WE   + ++ Y  +FGE+ + +V+ ++ TGRS+G+G+VTF
Sbjct: 26 KLFVGGLAWETQRETMRMYFEQFGEILEAVVITDKYTGRSKGYGFVTF 73



 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 34/64 (53%)

Query: 234 KIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARR 293
           K+FVG L  E   E +R YF +FG IL+  +  D      +G+GFVTF +   A R  + 
Sbjct: 26  KLFVGGLAWETQRETMRMYFEQFGEILEAVVITDKYTGRSKGYGFVTFKDPEAAIRACQN 85

Query: 294 PHEI 297
           P  +
Sbjct: 86  PSPV 89


>Medtr4g070080.2 | RNA-binding (RRM/RBD/RNP motif) family protein
          | LC | chr4:26374538-26375597 | 20130731
          Length = 128

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 3/57 (5%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFT---SVDDA 58
          +  V G+ W  D + L++  S++GE+ D  ++ +R TGRSRGFG+VTF    S++DA
Sbjct: 7  RCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDA 63


>Medtr4g070080.1 | RNA-binding (RRM/RBD/RNP motif) family protein
          | LC | chr4:26374412-26375716 | 20130731
          Length = 161

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 3/57 (5%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFT---SVDDA 58
          +  V G+ W  D + L++  S++GE+ D  ++ +R TGRSRGFG+VTF    S++DA
Sbjct: 7  RCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDA 63


>Medtr3g080130.1 | RNA-binding (RRM/RBD/RNP motif) family protein
          | HC | chr3:36253866-36255120 | 20130731
          Length = 135

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 38/56 (67%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKN 60
          KL V G+ W VD   LK+  S FG++ +  ++ ++ +GR+RGFG+V F++ D AK+
Sbjct: 37 KLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKS 92


>Medtr3g116130.2 | RNA-binding (RRM/RBD/RNP motif) family protein
          | HC | chr3:54301450-54296178 | 20130731
          Length = 281

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 39/59 (66%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLS 63
          K+ V G+ WE  ++ ++ Y  +FG++ + +V+ ++ TGRS+G+G+VTF   + A+   +
Sbjct: 30 KVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACA 88



 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 35/64 (54%)

Query: 234 KIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARR 293
           K+FVG L  E  +E +R+YF +FG IL+  +  D      +G+GFVTF +   A R    
Sbjct: 30  KVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACAD 89

Query: 294 PHEI 297
           P  +
Sbjct: 90  PSPV 93


>Medtr6g040190.1 | polyadenylate-binding protein | LC |
           chr6:14408733-14404765 | 20130731
          Length = 623

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 111/284 (39%), Gaps = 55/284 (19%)

Query: 6   LVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIE 65
           L +  +   +D   L E  S FG +  C V  + + G S+G G+V F +   AKN  +IE
Sbjct: 115 LFIKNLETSIDNKALHETFSVFGNVLSCKVAMD-SNGHSKGHGFVQFDNDQSAKN--AIE 171

Query: 66  HNLGNRMLEVKVA----TPKEEMKAPVKKVNRIFIARIPPSVTEATFRSHFEKYGDITDL 121
              G  M + KV        +E  +P  K   +++  +  S T    +  F  +G IT +
Sbjct: 172 KLDGMLMNDKKVYVGYFVRCQERSSP--KFTNVYVKNLSESYTYEDLKQLFNSFGVITSV 229

Query: 122 YMPKDQRSKTHRGIGFITYANADS----VENLMKETHELEGSTVVVDRATPKEDDFKPIX 177
            + K     + +  GF+ + ++DS    VE L   T   +G  + V RA  K +      
Sbjct: 230 LIMKYDNGNS-KCFGFVNFQSSDSAATAVEKLNGSTTN-DGKVLFVGRAQKKSE------ 281

Query: 178 XXXXXXXXXXXXXXXXXAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIFV 237
                                      R A L A   ++       R E  +  G  +++
Sbjct: 282 ---------------------------REAELKA--FFEQEK--LKRYEKFQ--GANLYL 308

Query: 238 GHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTF 281
            ++ +    E L++ F  FG I    +  DA R   +G GFV F
Sbjct: 309 KNIDKSLNEEKLKELFSEFGTITSCKVMSDA-RGRSKGVGFVAF 351



 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 5/87 (5%)

Query: 6   LVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLSIE 65
           L +  I   ++ + LKE  S+FG +  C VM + A GRS+G G+V FT+ ++A   +  E
Sbjct: 306 LYLKNIDKSLNEEKLKELFSEFGTITSCKVMSD-ARGRSKGVGFVAFTTPEEASKAID-E 363

Query: 66  HN---LGNRMLEVKVATPKEEMKAPVK 89
            N   +G + + V VA  KEE KA ++
Sbjct: 364 MNGKIIGQKPVYVSVAQRKEERKAQLQ 390


>Medtr4g070190.1 | RNA-binding (RRM/RBD/RNP motif) family protein
          | LC | chr4:26418780-26419998 | 20130731
          Length = 164

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 34/48 (70%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTF 52
          +  V G+ W  D++ L++  S++GE+ D  ++ +R TGRSRGFG+VTF
Sbjct: 9  RCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTF 56


>Medtr3g116130.1 | RNA-binding (RRM/RBD/RNP motif) family protein
          | HC | chr3:54300708-54296502 | 20130731
          Length = 372

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 39/59 (66%)

Query: 5  KLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNVLS 63
          K+ V G+ WE  ++ ++ Y  +FG++ + +V+ ++ TGRS+G+G+VTF   + A+   +
Sbjct: 30 KVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACA 88



 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 35/65 (53%)

Query: 234 KIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARR 293
           K+FVG L  E  +E +R+YF +FG IL+  +  D      +G+GFVTF +   A R    
Sbjct: 30  KVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACAD 89

Query: 294 PHEIC 298
           P  + 
Sbjct: 90  PSPVI 94


>Medtr7g094660.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr7:37745112-37734961 | 20130731
          Length = 865

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 19/186 (10%)

Query: 1   MEQRKLVVLGIPWEVDTDGLKEYMS---KFGELEDCIVMKERATGR--SRGFGYVTFTSV 55
           +E R L V  + ++   + L+E+ S   K G +    V K    G+  S GFG+V F S 
Sbjct: 638 IEARSLFVKNLNFKTTDEVLREHFSEHMKEGRILSVKVKKHLKNGKNVSMGFGFVEFDST 697

Query: 56  DDAKNVLSIE-------HNLGNRMLEVKVATPKEEMKAPVKKVN-RIFIARIPPSVTEAT 107
           + A +V +         H L  ++  VK    K + K    K + ++ +  +    TE  
Sbjct: 698 ETATSVCNDLQGTVLDGHALILQLCHVKNDDDKVQKKVEKDKSSTKLLVKNVAFEATEKD 757

Query: 108 FRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVEN---LMKETHELEGSTVVVD 164
            R  F  +G I  L +P   +   HRG  F+ Y      +N    +  TH L G  +V++
Sbjct: 758 LRQLFSPFGQIKSLRLP--MKFGNHRGFAFVEYVTQQEAQNALTALSSTH-LYGRHLVIE 814

Query: 165 RATPKE 170
           RA   E
Sbjct: 815 RAKEGE 820


>Medtr3g095230.1 | CC1-like splicing factor | LC |
           chr3:43513030-43521003 | 20130731
          Length = 587

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 22/181 (12%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           +QR +    +P +     + E+ SK G++ D  ++ +R + RS+G GY+ F    DA +V
Sbjct: 213 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFY---DAMSV 269

Query: 62  -----LSIEHNLGN-----------RMLEVKVATPKEEMKAPVKKVNR-IFIARIPPSVT 104
                LS +  LG             +++    T    +  P   V+R +++  +  ++T
Sbjct: 270 PMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTTGAAGVVGPYGAVDRKLYVGNLHFNMT 329

Query: 105 EATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETHELE--GSTVV 162
           E+  R  FE +G +  + +P D  +   +G GFI +A+ +  +       +LE  G T+ 
Sbjct: 330 ESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQSLNGKLEIAGRTIK 389

Query: 163 V 163
           V
Sbjct: 390 V 390


>Medtr3g095230.2 | CC1-like splicing factor | LC |
           chr3:43513031-43520987 | 20130731
          Length = 576

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 22/181 (12%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           +QR +    +P +     + E+ SK G++ D  ++ +R + RS+G GY+ F    DA +V
Sbjct: 213 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFY---DAMSV 269

Query: 62  -----LSIEHNLGN-----------RMLEVKVATPKEEMKAPVKKVNR-IFIARIPPSVT 104
                LS +  LG             +++    T    +  P   V+R +++  +  ++T
Sbjct: 270 PMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTTGAAGVVGPYGAVDRKLYVGNLHFNMT 329

Query: 105 EATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETHELE--GSTVV 162
           E+  R  FE +G +  + +P D  +   +G GFI +A+ +  +       +LE  G T+ 
Sbjct: 330 ESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQSLNGKLEIAGRTIK 389

Query: 163 V 163
           V
Sbjct: 390 V 390


>Medtr3g095230.3 | CC1-like splicing factor | LC |
           chr3:43513031-43520279 | 20130731
          Length = 576

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 22/181 (12%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           +QR +    +P +     + E+ SK G++ D  ++ +R + RS+G GY+ F    DA +V
Sbjct: 213 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFY---DAMSV 269

Query: 62  -----LSIEHNLGN-----------RMLEVKVATPKEEMKAPVKKVNR-IFIARIPPSVT 104
                LS +  LG             +++    T    +  P   V+R +++  +  ++T
Sbjct: 270 PMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTTGAAGVVGPYGAVDRKLYVGNLHFNMT 329

Query: 105 EATFRSHFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETHELE--GSTVV 162
           E+  R  FE +G +  + +P D  +   +G GFI +A+ +  +       +LE  G T+ 
Sbjct: 330 ESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQSLNGKLEIAGRTIK 389

Query: 163 V 163
           V
Sbjct: 390 V 390


>Medtr1g056520.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr1:24700218-24705084 | 20130731
          Length = 311

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 11/167 (6%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           + R+L V  +P+ + +  L +   + G +    ++ +  T RSRGF +VT  +V+DA+  
Sbjct: 106 QSRRLFVGNLPFSLSSSQLAQLFGEAGNVVSVEILYDDITNRSRGFAFVTMGNVEDAEEA 165

Query: 62  LSI--EHNLGNRML-----EVKVATPKEEMKAP----VKKVNRIFIARIPPSVTEATFRS 110
           + +     +G R +     EV +   + +M +     V   ++I+   +   +T    R 
Sbjct: 166 IRMFDGTTVGGRAIKVNFPEVPIVGKRVQMGSTYRGYVDSPHKIYAGNLGWDMTSQYLRK 225

Query: 111 HFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETHELE 157
            F K   +    +  ++ +   RG GF+++  A+ VE  +   + +E
Sbjct: 226 AFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNGVE 272


>Medtr1g056520.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr1:24700221-24703822 | 20130731
          Length = 311

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 11/167 (6%)

Query: 2   EQRKLVVLGIPWEVDTDGLKEYMSKFGELEDCIVMKERATGRSRGFGYVTFTSVDDAKNV 61
           + R+L V  +P+ + +  L +   + G +    ++ +  T RSRGF +VT  +V+DA+  
Sbjct: 106 QSRRLFVGNLPFSLSSSQLAQLFGEAGNVVSVEILYDDITNRSRGFAFVTMGNVEDAEEA 165

Query: 62  LSI--EHNLGNRML-----EVKVATPKEEMKAP----VKKVNRIFIARIPPSVTEATFRS 110
           + +     +G R +     EV +   + +M +     V   ++I+   +   +T    R 
Sbjct: 166 IRMFDGTTVGGRAIKVNFPEVPIVGKRVQMGSTYRGYVDSPHKIYAGNLGWDMTSQYLRK 225

Query: 111 HFEKYGDITDLYMPKDQRSKTHRGIGFITYANADSVENLMKETHELE 157
            F K   +    +  ++ +   RG GF+++  A+ VE  +   + +E
Sbjct: 226 AFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNGVE 272