Miyakogusa Predicted Gene

Lj2g3v1874590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1874590.1 Non Characterized Hit- tr|J2H350|J2H350_9CAUL
Uncharacterized protein OS=Caulobacter sp. AP07 PE=4
S,39.86,3e-18,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.37982.1
         (403 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g017410.1 | hypothetical protein | HC | chr5:6341723-63402...   461   e-130
Medtr5g014810.1 | hypothetical protein | LC | chr5:5026700-50281...   120   2e-27

>Medtr5g017410.1 | hypothetical protein | HC | chr5:6341723-6340200
           | 20130731
          Length = 395

 Score =  461 bits (1187), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/404 (63%), Positives = 292/404 (72%), Gaps = 12/404 (2%)

Query: 1   MVDVDRRMTGLNQAHIAGXXXXXXXXXXXXXXXXXXX-NGLLSFSPLADKVITHLRTSGI 59
           MVDVDRRMTGLN AHIAG                    N L SFS + DKVIT L  SG+
Sbjct: 1   MVDVDRRMTGLNPAHIAGLRRLSARAASSSTSSSSSERNCLFSFSSVVDKVITQLHNSGV 60

Query: 60  EVQPGLSDXXXXXXXXXXXXXXPPDLRAILAAGLPVGAGFPNWXXXXXXXXXXXXSLDLP 119
           +VQPGLSD              PPDLRAILAAG+PVG GFP+W            SLDLP
Sbjct: 61  QVQPGLSDAEFARAEAEFSFVFPPDLRAILAAGIPVGPGFPDWRSTAARLRLRA-SLDLP 119

Query: 120 IAAISFQIARNALWARCWGPRPAEPEKALRVARNALKRAPLLIPIFNHCYIPCNPSLAGN 179
           IAAISFQIARNA W++ WG RP+EPEKAL++ARNALK+APLLIPIFNHCYIP NPSLAGN
Sbjct: 120 IAAISFQIARNAFWSKSWGLRPSEPEKALKIARNALKKAPLLIPIFNHCYIPSNPSLAGN 179

Query: 180 PIFFVDESRVFCCGFDLSDFFDRESPFRGSESEPGPLVLKKQRSVAEKTKTTSVCSASGF 239
           PIF+VDE+R+FCCGFDLSDFF RES FR SES+P   +L KQRSV+EK    S  S++ F
Sbjct: 180 PIFYVDENRIFCCGFDLSDFFQRESLFRRSESDPK--ILMKQRSVSEK----SAGSSTAF 233

Query: 240 QRRSLDAGGRTPRWVEFWXXXXXXXXXXXXXXXXXXXXXPEKFFDV-RRWELPKWVEDYV 298
            RRSLD GGRTPRWVEFW                     PE+FFD+  R  +P WV++Y+
Sbjct: 234 SRRSLDTGGRTPRWVEFW--TEAATDRRRRNSLSSESTSPERFFDIPPRSVIPGWVDEYI 291

Query: 299 GGIGSVLREGGWSESDISEMVEVSGSGFFEGDMVMLDNQAVLDAMLLKVDRFSDSLRKSG 358
             IGSVL+ GGWSE DI+EMV+VS  GFFEG+MVMLDNQA+LDA+LLK DRFSDSLRK+G
Sbjct: 292 DKIGSVLKAGGWSEPDITEMVQVSACGFFEGEMVMLDNQALLDALLLKADRFSDSLRKAG 351

Query: 359 WSSEEVSDALGFDFRLPEKERRPPMKLSPELVQRIEKLAESVSR 402
           WSSEEVS+ALGFDFR PEKER+P  KLSPELV++IEKLA+SVS 
Sbjct: 352 WSSEEVSEALGFDFR-PEKERKPVKKLSPELVEKIEKLAQSVSH 394


>Medtr5g014810.1 | hypothetical protein | LC | chr5:5026700-5028101
           | 20130731
          Length = 314

 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 92/177 (51%), Gaps = 6/177 (3%)

Query: 41  LSFSPLADKVITHLRTSGIEVQPGLSDXXXXXXXXXXXXXXPPDLRAILAAGLPVGAGFP 100
            SF+  A+ +I +L++S I ++ GL++              PPDL AIL  GLPV  GFP
Sbjct: 31  FSFTTYANDLIQNLKSSNIIIEQGLTESEFQHLESKFNLKFPPDLHAILQQGLPVSPGFP 90

Query: 101 NWXXXXXXXXXXXXSLDLPIAAISFQIARNALWARCWGPRPAEPEKALRVARNALKRAPL 160
           NW             L++P+++I  ++  N+ W   WGP P +    L  A+  L  AP 
Sbjct: 91  NWRSSSHQQLQIL--LNIPVSSILRRVKNNSFWHPSWGPIPKD---KLTAAQRILDPAPQ 145

Query: 161 LIPIFNHCYIPCNPSLAGNPIFFVDES-RVFCCGFDLSDFFDRESPFRGSESEPGPL 216
           L+PIF HCYIP NP + GNP+F+VD S  V   G+D+  FF       G E    P+
Sbjct: 146 LVPIFRHCYIPMNPFVTGNPVFYVDHSGDVRLVGYDIVGFFRDGGFLDGVEEVDDPV 202