Miyakogusa Predicted Gene

Lj2g3v1838160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1838160.1 Non Characterized Hit- tr|G7ZY27|G7ZY27_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,48.94,0.0000000000005, ,CUFF.37950.1
         (99 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g017710.1 | hypothetical protein | LC | chr5:6528396-65291...    60   5e-10

>Medtr5g017710.1 | hypothetical protein | LC |
          chr5:6528396-6529125 | 20130731
          Length = 85

 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 12/90 (13%)

Query: 10 CVVFLLLILHHQHVCVQGRHLRSCLCRGCPKTCVKIKSGVAHGVGDRGNRATTHDYDTHQ 69
          C++F+LL++  + + ++GR LR  +  G PK              +   R+        Q
Sbjct: 8  CLIFVLLLISCELLSIEGRSLRKSI--GSPKAASV----------ETMTRSVVLSPRQLQ 55

Query: 70 GRKRLVEYEVEAFRPTSPGHSPGVGHSINN 99
             R +E  VEAFRPT+PGHSPGVGHS+ N
Sbjct: 56 NNGRNLEGSVEAFRPTTPGHSPGVGHSLKN 85