Miyakogusa Predicted Gene

Lj2g3v1837140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1837140.1 tr|B9HHI3|B9HHI3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_562994 PE=4
SV=1,49.41,0,seg,NULL; DUF3651,Protein of unknown function DUF3651,
TMEM131; SUBFAMILY NOT NAMED,NULL; RW1 PROTEI,CUFF.37968.1
         (1266 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g079870.1 | hypothetical protein | HC | chr8:34275315-3427...    85   6e-16

>Medtr8g079870.1 | hypothetical protein | HC | chr8:34275315-34274810
            | 20130731
          Length = 95

 Score = 84.7 bits (208), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 47/67 (70%)

Query: 1193 RAPGSKLHNQKAAEAQETGLADEYTYDIWGDHFSLLHILVPKNATPMKYSSVENDFDSFF 1252
            RAPGSKL  QK   A + G A+EYTYDIWG H S +H+LVPK+ T MK S  E +F+SFF
Sbjct: 28   RAPGSKLDKQKTVVAPQAGHAEEYTYDIWGGHLSGIHLLVPKDVTCMKSSPAEKNFNSFF 87

Query: 1253 VKGPQTL 1259
            V  PQ +
Sbjct: 88   VGEPQAI 94