Miyakogusa Predicted Gene

Lj2g3v1834010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1834010.1 Non Characterized Hit- tr|I1J946|I1J946_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49186 PE,80.77,0,no
description,Tubulin/FtsZ, GTPase domain; coiled-coil,NULL; seg,NULL;
TUBULIN-RELATED PROTEIN,NULL,CUFF.37921.1
         (570 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g017970.1 | misato segment II myosin-like domain protein |...   810   0.0  

>Medtr5g017970.1 | misato segment II myosin-like domain protein | HC
           | chr5:6670233-6662266 | 20130731
          Length = 566

 Score =  810 bits (2093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/573 (69%), Positives = 456/573 (79%), Gaps = 10/573 (1%)

Query: 1   MKEIVTLQIGDFANFIGSHFWNFQDELLGLAGDTHGDSVFNSQDLNMDVLYRTGET-QGI 59
           MKEIVT+Q+GD+AN++GSHFWNFQDELLGLAGD   DSVF + DLNMDV YRTG T QGI
Sbjct: 1   MKEIVTIQVGDYANYVGSHFWNFQDELLGLAGDPQADSVFKNHDLNMDVFYRTGHTLQGI 60

Query: 60  HTYTPRLVSINLRGSLGSMSSCGTLYKEVAPTTSDVVTWTGRVSTQASQSHQRNLFLQRX 119
            TYTPRL+SIN+RGSLGSMSS GT+YKE AP TS+V TWTG VSTQAS+  ++NLFLQ  
Sbjct: 61  DTYTPRLLSINMRGSLGSMSSRGTMYKEAAPATSNVFTWTGGVSTQASEPQKKNLFLQSL 120

Query: 120 XXXXXXXXXXXXTSSTNNGSQSEYQDKDIIQCLENGVKFWTDYSKVHYHPQSLHELNGIW 179
                         +  +GS SEYQD+DI + LENGV+FWTDYSKVH+HPQSL+ELNG+W
Sbjct: 121 YEEENQNMV-----NETSGSPSEYQDRDITESLENGVQFWTDYSKVHFHPQSLYELNGVW 175

Query: 180 TDAEEFDNYGIRRDSFAWASQGEEISDRLRFFVEECDNIQGFQFVVDDSGGFSAVAAEFL 239
           TD  +FDNYGI RDSFAWASQGEEISDRLRFFVEECD++QGFQFVVDDSGGFS+VA+EFL
Sbjct: 176 TDVGDFDNYGIGRDSFAWASQGEEISDRLRFFVEECDHVQGFQFVVDDSGGFSSVASEFL 235

Query: 240 ENIADEYPNTPVLLYAVQGSSSH-KILSRKRTISAELHDAVSFSRLSSFCKLIVPVGLPT 298
           ENI DEY NTPV+LY V+GS    ++ SR   I  +LHDA+SFSRLSS+CKLIVPVGLP+
Sbjct: 236 ENIVDEYTNTPVMLYTVRGSGPKARLQSRNHKILEDLHDAISFSRLSSYCKLIVPVGLPS 295

Query: 299 LSKSKASKFLHIEDEKHYHSSAVYAAALHSISLPFRMAPVGPATYACSVYGAVNFHEVIQ 358
           L  SKASKFLHIEDEKHYHSSAVYAAALHSISLPFRMAPVGP   ACSV GAV+FH +IQ
Sbjct: 296 L--SKASKFLHIEDEKHYHSSAVYAAALHSISLPFRMAPVGPTADACSVSGAVDFHGLIQ 353

Query: 359 MLSGQGRQNMVSVLDVAMPLLALTGGQNELSLIGNLHPLTPQIAEDVEDMQAIEHIAVHG 418
           MLSGQGRQNMVS+LDVAMP  ALTGG+ EL L+ N  PLTP I+ED ED+QAIEH+ VHG
Sbjct: 354 MLSGQGRQNMVSILDVAMPTPALTGGKKELCLLENFQPLTPMISEDGEDLQAIEHLTVHG 413

Query: 419 AFAS-EGHRASVCKVKDTVDAAFQRANTRPMFCHLAVAXXXXXXXXXXXXXXANQVGRHG 477
             AS EG RASVC+VKD VDAA+QRANTRP+F HL+VA               NQ+G++G
Sbjct: 414 ILASVEGLRASVCEVKDAVDAAYQRANTRPLFSHLSVARCPLPIPLPFPSIFGNQIGKYG 473

Query: 478 ELIGGQMSSTSSKGSLDIHSIPMAARLRSSSAVLPLLESKLRNLNRFGTARGASGAELLR 537
           EL+  Q++++ SKGSLD+HSIPMAARLRSSS VLPLLE  L+NL+R+G  RGA+GAELLR
Sbjct: 474 ELMSDQLTNSPSKGSLDVHSIPMAARLRSSSTVLPLLEYNLQNLHRYGITRGAAGAELLR 533

Query: 538 SWGFXXXXXXXXXXXXXXMVAALSPPQFSSDSD 570
            WGF              MVA L PP+ SSDSD
Sbjct: 534 GWGFEKEELVEMQEMLSKMVATLCPPELSSDSD 566