Miyakogusa Predicted Gene

Lj2g3v1831970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1831970.1 tr|F7VVS3|F7VVS3_SORMK WGS project CABT00000000
data, contig 2.9 OS=Sordaria macrospora (strain
ATCC,48.98,0.000000000000008,SWI complex, BAF60b domains,SWIB domain;
SWIB/MDM2 domain,SWIB/MDM2 domain; DEK C-terminal
domain,NU,CUFF.37914.1
         (339 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g018010.1 | upstream activation factor subunit UAF30, puta...   387   e-108
Medtr5g018010.3 | upstream activation factor subunit UAF30, puta...   305   3e-83
Medtr5g018010.2 | upstream activation factor subunit UAF30, puta...   305   3e-83
Medtr3g055330.1 | SWIB/MDM2 domain protein | HC | chr3:21756054-...   157   2e-38
Medtr3g055330.2 | SWIB/MDM2 domain protein | HC | chr3:21756054-...   127   1e-29
Medtr5g025500.1 | SWIB/MDM2 domain protein | HC | chr5:10358957-...    77   2e-14
Medtr5g005200.1 | SWIB/MDM2 domain protein | HC | chr5:242485-24...    63   4e-10
Medtr5g021500.1 | zinc finger CCCH domain protein | HC | chr5:83...    50   5e-06

>Medtr5g018010.1 | upstream activation factor subunit UAF30,
           putative | HC | chr5:6695520-6691091 | 20130731
          Length = 344

 Score =  387 bits (995), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/358 (62%), Positives = 238/358 (66%), Gaps = 33/358 (9%)

Query: 1   MVSESELIGRLREFLRSSDLNTTTTATVRRQLESDFGIDLSDRKAFIREQVDLFLQTXXX 60
           MVSESELI RLREFLR+SDLNTTTT+TVRRQLESDFGIDLSDRK+FIREQVDLFLQT   
Sbjct: 1   MVSESELIDRLREFLRNSDLNTTTTSTVRRQLESDFGIDLSDRKSFIREQVDLFLQTVQQ 60

Query: 61  XXXXXXXXXXXXXXNDDVEESQHSD------SKXXXXXXXXXXXXXXXXXXXXXXXXXXX 114
                         ND VEE    D                                   
Sbjct: 61  DDEPQ---------NDAVEEEDADDKPEQSQEGSEEEDDNNEEEETPKRTRGSVKKTKNK 111

Query: 115 XXXXXXXXXDNEVVKKKGGGFCKLCSLSPQLQEFTGVPKMAGTEVVKQLWVYIKEKDLQD 174
                    D  V KK GGGFCK+CSLSPQLQEF G P+MA TEVVKQLW YI+EKDLQD
Sbjct: 112 KKERSNKSGDEVVKKKGGGGFCKICSLSPQLQEFVGAPEMARTEVVKQLWAYIREKDLQD 171

Query: 175 PSNRRNILCDESLRALFGVNSINMFQMNKALSKHIWPLDSDDXXXXXXXXXXXXX----- 229
           P+NRRNI+CDE LRALFGV++INMFQMNK L+KHIWPLDSDD                  
Sbjct: 172 PNNRRNIICDEPLRALFGVDTINMFQMNKVLAKHIWPLDSDDVIQVKSAPKEKPAPKEKP 231

Query: 230 --------XXEREDDLDEPKTKEKRQKGEKGKSPSGFLAPLQLSDALVNFLGTGESELSR 281
                       +DDLDEPK KEKRQK   GK   GFLAPLQLSDAL  FL  GESELSR
Sbjct: 232 ARKEKKKKQEREDDDLDEPKGKEKRQKVGSGK---GFLAPLQLSDALAKFL--GESELSR 286

Query: 282 SDVIKRMWEYIKGNDLQDPSDKRKILCDDKLKELFDVDSFNGFTVTKLLTPHFIKAEQ 339
           SDVIKRMW+YIKGN+LQDPSDKR+ILCD+KLKELFDVDSF GFTVTKLL PHFIKAEQ
Sbjct: 287 SDVIKRMWDYIKGNNLQDPSDKRQILCDEKLKELFDVDSFVGFTVTKLLAPHFIKAEQ 344


>Medtr5g018010.3 | upstream activation factor subunit UAF30,
           putative | HC | chr5:6695520-6691109 | 20130731
          Length = 267

 Score =  305 bits (782), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 156/218 (71%), Positives = 169/218 (77%), Gaps = 18/218 (8%)

Query: 135 FCKLCSLSPQLQEFTGVPKMAGTEVVKQLWVYIKEKDLQDPSNRRNILCDESLRALFGVN 194
           FCK+CSLSPQLQEF G P+MA TEVVKQLW YI+EKDLQDP+NRRNI+CDE LRALFGV+
Sbjct: 55  FCKICSLSPQLQEFVGAPEMARTEVVKQLWAYIREKDLQDPNNRRNIICDEPLRALFGVD 114

Query: 195 SINMFQMNKALSKHIWPLDSDDXXXXXXXXXXXXX-------------XXEREDDLDEPK 241
           +INMFQMNK L+KHIWPLDSDD                              +DDLDEPK
Sbjct: 115 TINMFQMNKVLAKHIWPLDSDDVIQVKSAPKEKPAPKEKPARKEKKKKQEREDDDLDEPK 174

Query: 242 TKEKRQKGEKGKSPSGFLAPLQLSDALVNFLGTGESELSRSDVIKRMWEYIKGNDLQDPS 301
            KEKRQK   GK   GFLAPLQLSDAL  FL  GESELSRSDVIKRMW+YIKGN+LQDPS
Sbjct: 175 GKEKRQKVGSGK---GFLAPLQLSDALAKFL--GESELSRSDVIKRMWDYIKGNNLQDPS 229

Query: 302 DKRKILCDDKLKELFDVDSFNGFTVTKLLTPHFIKAEQ 339
           DKR+ILCD+KLKELFDVDSF GFTVTKLL PHFIKAEQ
Sbjct: 230 DKRQILCDEKLKELFDVDSFVGFTVTKLLAPHFIKAEQ 267


>Medtr5g018010.2 | upstream activation factor subunit UAF30,
           putative | HC | chr5:6695520-6691109 | 20130731
          Length = 267

 Score =  305 bits (782), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 156/218 (71%), Positives = 169/218 (77%), Gaps = 18/218 (8%)

Query: 135 FCKLCSLSPQLQEFTGVPKMAGTEVVKQLWVYIKEKDLQDPSNRRNILCDESLRALFGVN 194
           FCK+CSLSPQLQEF G P+MA TEVVKQLW YI+EKDLQDP+NRRNI+CDE LRALFGV+
Sbjct: 55  FCKICSLSPQLQEFVGAPEMARTEVVKQLWAYIREKDLQDPNNRRNIICDEPLRALFGVD 114

Query: 195 SINMFQMNKALSKHIWPLDSDDXXXXXXXXXXXXX-------------XXEREDDLDEPK 241
           +INMFQMNK L+KHIWPLDSDD                              +DDLDEPK
Sbjct: 115 TINMFQMNKVLAKHIWPLDSDDVIQVKSAPKEKPAPKEKPARKEKKKKQEREDDDLDEPK 174

Query: 242 TKEKRQKGEKGKSPSGFLAPLQLSDALVNFLGTGESELSRSDVIKRMWEYIKGNDLQDPS 301
            KEKRQK   GK   GFLAPLQLSDAL  FL  GESELSRSDVIKRMW+YIKGN+LQDPS
Sbjct: 175 GKEKRQKVGSGK---GFLAPLQLSDALAKFL--GESELSRSDVIKRMWDYIKGNNLQDPS 229

Query: 302 DKRKILCDDKLKELFDVDSFNGFTVTKLLTPHFIKAEQ 339
           DKR+ILCD+KLKELFDVDSF GFTVTKLL PHFIKAEQ
Sbjct: 230 DKRQILCDEKLKELFDVDSFVGFTVTKLLAPHFIKAEQ 267


>Medtr3g055330.1 | SWIB/MDM2 domain protein | HC |
           chr3:21756054-21752570 | 20130731
          Length = 344

 Score =  157 bits (396), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 28/212 (13%)

Query: 129 KKKGG--GFCKLCSLSPQLQEFTGVPKMAGTEVVKQLWVYIKEKDLQDPSNRRNILCDES 186
           K++GG  G  KLC +SP+LQ   G P M  TE+VKQLW YIK+ +LQDPSN+R I+C++ 
Sbjct: 152 KRRGGPGGLNKLCGVSPELQVIVGQPAMPRTEIVKQLWAYIKKNNLQDPSNKRKIICNDE 211

Query: 187 LRALFGVNSINMFQMNKALSKHIWPLDSDDXXXXXXXXXXXXXXXEREDDLDEPKTKEKR 246
           LR +F  +  +MF+MNK L+KHI  L+                         +P  K+++
Sbjct: 212 LRVVFETDCTDMFKMNKLLAKHIIALEPT----------------------KKPAPKKQK 249

Query: 247 QKGEKGKSPSGFLAP---LQLSDALVNFLGTGESELSRSDVIKRMWEYIKGNDLQDPSDK 303
            + E G   S   AP   + +SD+L NF G    E+ +++V++R+WEYIK N L+DP + 
Sbjct: 250 VEVEVGTR-SAEPAPTPSVIISDSLANFFGVTGREMLQTEVLRRIWEYIKVNQLEDPVNP 308

Query: 304 RKILCDDKLKELFDVDSFNGFTVTKLLTPHFI 335
             I+CD KL+E+F  +S +   + ++L  H I
Sbjct: 309 MAIMCDAKLQEIFGCESISALGIPEVLGRHHI 340



 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 47/65 (72%)

Query: 274 TGESELSRSDVIKRMWEYIKGNDLQDPSDKRKILCDDKLKELFDVDSFNGFTVTKLLTPH 333
            G+  + R++++K++W YIK N+LQDPS+KRKI+C+D+L+ +F+ D  + F + KLL  H
Sbjct: 174 VGQPAMPRTEIVKQLWAYIKKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKH 233

Query: 334 FIKAE 338
            I  E
Sbjct: 234 IIALE 238


>Medtr3g055330.2 | SWIB/MDM2 domain protein | HC |
           chr3:21756054-21752893 | 20130731
          Length = 306

 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 102/175 (58%), Gaps = 28/175 (16%)

Query: 129 KKKGG--GFCKLCSLSPQLQEFTGVPKMAGTEVVKQLWVYIKEKDLQDPSNRRNILCDES 186
           K++GG  G  KLC +SP+LQ   G P M  TE+VKQLW YIK+ +LQDPSN+R I+C++ 
Sbjct: 152 KRRGGPGGLNKLCGVSPELQVIVGQPAMPRTEIVKQLWAYIKKNNLQDPSNKRKIICNDE 211

Query: 187 LRALFGVNSINMFQMNKALSKHIWPLDSDDXXXXXXXXXXXXXXXEREDDLDEPKTKEKR 246
           LR +F  +  +MF+MNK L+KHI  L+                         +P  K+++
Sbjct: 212 LRVVFETDCTDMFKMNKLLAKHIIALEPT----------------------KKPAPKKQK 249

Query: 247 QKGEKGKSPSGFLAP---LQLSDALVNFLGTGESELSRSDVIKRMWEYIKGNDLQ 298
            + E G   S   AP   + +SD+L NF G    E+ +++V++R+WEYIK N L+
Sbjct: 250 VEVEVGTR-SAEPAPTPSVIISDSLANFFGVTGREMLQTEVLRRIWEYIKVNQLE 303



 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 47/65 (72%)

Query: 274 TGESELSRSDVIKRMWEYIKGNDLQDPSDKRKILCDDKLKELFDVDSFNGFTVTKLLTPH 333
            G+  + R++++K++W YIK N+LQDPS+KRKI+C+D+L+ +F+ D  + F + KLL  H
Sbjct: 174 VGQPAMPRTEIVKQLWAYIKKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKH 233

Query: 334 FIKAE 338
            I  E
Sbjct: 234 IIALE 238


>Medtr5g025500.1 | SWIB/MDM2 domain protein | HC |
           chr5:10358957-10357050 | 20130731
          Length = 134

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 3/86 (3%)

Query: 253 KSPSGFLAPLQLSDALVNFLGTGESELSRSDVIKRMWEYIKGNDLQDPSDKRKILCDDKL 312
           KS  G    +Q++  L NF+G    E+SR++ +K++WEYIK  +LQ+P++K++I CDDKL
Sbjct: 50  KSTGGIQKVVQVTSELGNFIGA--PEVSRTEAVKKVWEYIKLQNLQNPNNKKEIFCDDKL 107

Query: 313 KELFDVDSFNGFT-VTKLLTPHFIKA 337
           K +FD      FT + KLL  HF+K+
Sbjct: 108 KTIFDGKDKVVFTEIAKLLATHFVKS 133



 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 1/83 (1%)

Query: 127 VVKKKGGGFCKLCSLSPQLQEFTGVPKMAGTEVVKQLWVYIKEKDLQDPSNRRNILCDES 186
           V  K  GG  K+  ++ +L  F G P+++ TE VK++W YIK ++LQ+P+N++ I CD+ 
Sbjct: 47  VTSKSTGGIQKVVQVTSELGNFIGAPEVSRTEAVKKVWEYIKLQNLQNPNNKKEIFCDDK 106

Query: 187 LRALF-GVNSINMFQMNKALSKH 208
           L+ +F G + +   ++ K L+ H
Sbjct: 107 LKTIFDGKDKVVFTEIAKLLATH 129


>Medtr5g005200.1 | SWIB/MDM2 domain protein | HC |
           chr5:242485-244145 | 20130731
          Length = 143

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 49/76 (64%), Gaps = 1/76 (1%)

Query: 134 GFCKLCSLSPQLQEFTGVPKMAGTEVVKQLWVYIKEKDLQDPSNRRNILCDESLRALF-G 192
           G  K   +SP++Q+  G P+++ T+ +K +W +IKE +LQ+P  +R I CDE L+ +F G
Sbjct: 65  GIMKPKKISPEMQDLVGQPEISRTQALKSIWAHIKEHNLQNPEKKRLIRCDEKLKKVFAG 124

Query: 193 VNSINMFQMNKALSKH 208
            + ++M ++   +S H
Sbjct: 125 RDEVDMLEIAGLISPH 140



 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 3/90 (3%)

Query: 247 QKGEKGKSPSGFLAPLQLSDALVNFLGTGESELSRSDVIKRMWEYIKGNDLQDPSDKRKI 306
           Q    G    G + P ++S  + + +G  + E+SR+  +K +W +IK ++LQ+P  KR I
Sbjct: 55  QPPPTGGKIRGIMKPKKISPEMQDLVG--QPEISRTQALKSIWAHIKEHNLQNPEKKRLI 112

Query: 307 LCDDKLKELF-DVDSFNGFTVTKLLTPHFI 335
            CD+KLK++F   D  +   +  L++PHF+
Sbjct: 113 RCDEKLKKVFAGRDEVDMLEIAGLISPHFL 142


>Medtr5g021500.1 | zinc finger CCCH domain protein | HC |
           chr5:8311147-8303973 | 20130731
          Length = 1265

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 11/102 (10%)

Query: 248 KGEKGKSPSGFLAPLQLSDA----------LVNFLGTGESE-LSRSDVIKRMWEYIKGND 296
           K +K K PSG    + L +            V+ +  G++  LS+ DV   + EY+K N+
Sbjct: 281 KNKKPKGPSGGDTGMSLPECKRWASKELLEFVSHMKNGDTSILSQFDVQNLLLEYVKKNN 340

Query: 297 LQDPSDKRKILCDDKLKELFDVDSFNGFTVTKLLTPHFIKAE 338
           L+DP  K  I+CD +L  LF         +  LL PHF+  E
Sbjct: 341 LRDPQQKSLIVCDSRLVNLFGKARLGYIEMLMLLEPHFLIKE 382