Miyakogusa Predicted Gene

Lj2g3v1828890.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1828890.1 Non Characterized Hit- tr|D8U1A0|D8U1A0_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,28.34,3e-16,UNCHARACTERIZED,NULL; seg,NULL;
coiled-coil,NULL,CUFF.37907.1
         (485 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g018390.1 | hydroxyproline-rich glycoprotein family protei...   518   e-147

>Medtr5g018390.1 | hydroxyproline-rich glycoprotein family protein,
           putative | HC | chr5:6856802-6850645 | 20130731
          Length = 489

 Score =  518 bits (1335), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/425 (63%), Positives = 290/425 (68%), Gaps = 3/425 (0%)

Query: 60  TNDRTLASYGTNWSDLHPDSQKILLQIEERILEYRDEGQRLDQFSLLYDSSVSNDGFEVD 119
           TND+T ASY TNW+DLHPDSQK LLQIEER+LEYRDE QRLDQ + LYDSSVSNDGFEVD
Sbjct: 68  TNDKTPASYSTNWADLHPDSQKFLLQIEERVLEYRDESQRLDQCNRLYDSSVSNDGFEVD 127

Query: 120 ACHIVQELGGISTAMERQKALLQELMSVVKDMLRNTEVAVRSFMMLRPRFHXXXXXXXXX 179
           A HIVQELGGISTAMERQK LLQEL S VKDMLRNTEVAVRSFM+LRPRFH         
Sbjct: 128 ASHIVQELGGISTAMERQKTLLQELTSAVKDMLRNTEVAVRSFMILRPRFHYPSGGASSA 187

Query: 180 XXXXXXXVXXXXXXXXXXXXXXMVPVFDFYSGLPKKPSPFLQQTVLRFEKYLGECHQWVX 239
                                 MVPVFDFYSGLPKKPSPFLQQT+LRFEKY+GECHQW+ 
Sbjct: 188 TAPSQTPGATTPSLNSQPPATSMVPVFDFYSGLPKKPSPFLQQTILRFEKYIGECHQWIQ 247

Query: 240 XXXXXXXXDSERNTSSNGSSLLQSLPKVMTNVHDFFVHVASKVEGIHQYIESMKSAYLAD 299
                   +SE+N SSNGSSLLQSLPKVMTNVHDFFVHVA+KVE IHQY+ESMK+AYLAD
Sbjct: 248 ELEQLLLLESEKNASSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYMESMKTAYLAD 307

Query: 300 QRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGLLNA 359
           QRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQG L +
Sbjct: 308 QRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALVS 367

Query: 360 PQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPAPGSSWFASSSTTPQXXXX 419
            QT                                    TPA G+SW A SS+TPQ    
Sbjct: 368 QQT--AATTPSLSIGSGSSLFNTPSSAPSTTPSLFGTPTTPAQGASWPAPSSSTPQGSLF 425

Query: 420 XXXXXXXXXXXXTPSLFGNTAPLLNTPPATSSFFSNPFPXXXXXXXXXXXXXQKNPRPKG 479
                       TPSLFGN+ PL N+ PA +S F +P+               KNPR K 
Sbjct: 426 GSASSSLPGATSTPSLFGNSTPLFNSTPAGTSVFPSPY-VSGAATGSGASFGAKNPRSKS 484

Query: 480 RVSTR 484
           R + R
Sbjct: 485 RTARR 489