Miyakogusa Predicted Gene
- Lj2g3v1828670.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1828670.1 Non Characterized Hit- tr|I1ISN4|I1ISN4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,27.31,8e-19,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; PPR_2,Pentatricopeptide repeat; PROKA,CUFF.37879.1
(330 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 553 e-158
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 299 2e-81
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 299 2e-81
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 293 1e-79
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 290 1e-78
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 286 2e-77
Medtr3g052720.1 | organelle transcript processing protein, putat... 283 1e-76
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 282 4e-76
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 279 2e-75
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 279 3e-75
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 277 1e-74
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 276 2e-74
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 276 2e-74
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 275 3e-74
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 275 4e-74
Medtr5g006420.1 | organelle transcript processing protein, putat... 275 4e-74
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 274 7e-74
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 274 8e-74
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 274 1e-73
Medtr4g113830.1 | organelle transcript processing protein, putat... 273 2e-73
Medtr1g059720.1 | organelle transcript processing protein, putat... 273 2e-73
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 272 3e-73
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 270 2e-72
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 269 2e-72
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 269 2e-72
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 269 3e-72
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 268 7e-72
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 268 7e-72
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 268 7e-72
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 268 7e-72
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 266 2e-71
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 265 5e-71
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 263 2e-70
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 263 2e-70
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 262 3e-70
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 262 4e-70
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 261 7e-70
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 261 8e-70
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 261 9e-70
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 260 1e-69
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 260 1e-69
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 259 2e-69
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 259 2e-69
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 259 3e-69
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 259 3e-69
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 258 5e-69
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 258 7e-69
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 258 8e-69
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 256 2e-68
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 256 3e-68
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 254 5e-68
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 254 7e-68
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 254 7e-68
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 254 1e-67
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 254 1e-67
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 254 1e-67
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 253 2e-67
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 253 2e-67
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 253 2e-67
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 253 3e-67
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 252 3e-67
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 252 3e-67
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 251 7e-67
Medtr3g117150.1 | organelle transcript processing protein, putat... 251 7e-67
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 250 1e-66
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 250 1e-66
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 249 2e-66
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 249 2e-66
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 249 3e-66
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 249 4e-66
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 249 4e-66
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 247 1e-65
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 247 1e-65
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 246 2e-65
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 246 2e-65
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 246 2e-65
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 246 3e-65
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 245 4e-65
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 244 6e-65
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 244 9e-65
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 244 9e-65
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 244 9e-65
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 244 9e-65
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 244 1e-64
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 244 1e-64
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 244 1e-64
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 244 1e-64
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 243 1e-64
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 243 1e-64
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 243 2e-64
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 243 2e-64
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 243 2e-64
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 243 2e-64
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 243 2e-64
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 243 2e-64
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 243 3e-64
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 242 4e-64
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 242 4e-64
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 242 4e-64
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 242 5e-64
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 241 5e-64
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 241 7e-64
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 241 9e-64
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 240 1e-63
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 240 2e-63
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 239 2e-63
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 239 2e-63
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 239 2e-63
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 239 2e-63
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 239 2e-63
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 239 2e-63
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 239 2e-63
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 239 3e-63
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 5e-63
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 238 8e-63
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 237 1e-62
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 237 1e-62
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 237 1e-62
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 236 2e-62
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 236 2e-62
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 236 2e-62
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 236 2e-62
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 236 2e-62
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 236 3e-62
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 236 3e-62
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 236 3e-62
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 235 3e-62
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 235 4e-62
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 235 4e-62
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 235 5e-62
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 235 6e-62
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 234 6e-62
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 8e-62
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 234 1e-61
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 1e-61
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 1e-61
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 234 1e-61
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 233 2e-61
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 233 2e-61
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 232 3e-61
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 232 3e-61
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 232 5e-61
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 231 7e-61
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 230 1e-60
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 230 1e-60
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 229 2e-60
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 229 2e-60
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 229 3e-60
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 229 3e-60
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 228 5e-60
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 228 6e-60
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 228 6e-60
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 228 6e-60
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 228 6e-60
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 228 6e-60
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 228 6e-60
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 228 9e-60
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 227 1e-59
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 227 1e-59
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 227 1e-59
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 227 1e-59
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 227 2e-59
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 226 2e-59
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 226 2e-59
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 226 3e-59
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 226 3e-59
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 226 3e-59
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 225 4e-59
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 225 5e-59
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 224 6e-59
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 224 6e-59
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 224 1e-58
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 224 1e-58
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 2e-58
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 2e-58
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 222 3e-58
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 222 4e-58
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 221 7e-58
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 219 3e-57
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 219 3e-57
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 219 4e-57
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 219 4e-57
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 218 5e-57
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 218 8e-57
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 217 1e-56
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 217 1e-56
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 216 2e-56
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 216 2e-56
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 215 5e-56
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 214 1e-55
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 214 1e-55
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 213 2e-55
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 213 2e-55
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 213 2e-55
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 213 3e-55
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 211 9e-55
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 211 9e-55
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 211 1e-54
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 211 1e-54
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 210 1e-54
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 210 2e-54
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 210 2e-54
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 209 2e-54
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 209 4e-54
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 209 4e-54
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 208 6e-54
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 208 6e-54
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 207 1e-53
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 207 1e-53
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 207 2e-53
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 206 2e-53
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 206 3e-53
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 205 4e-53
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 205 6e-53
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 205 6e-53
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 203 1e-52
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 203 2e-52
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 203 2e-52
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 202 3e-52
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 202 3e-52
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 202 4e-52
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 201 9e-52
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 201 9e-52
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 201 1e-51
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 199 2e-51
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 199 3e-51
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 198 7e-51
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 197 1e-50
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 197 1e-50
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 197 2e-50
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 196 2e-50
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 196 3e-50
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 196 3e-50
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 194 8e-50
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 192 3e-49
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 192 4e-49
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 191 7e-49
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 191 7e-49
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 190 1e-48
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 189 2e-48
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 188 6e-48
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 188 6e-48
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 187 1e-47
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 185 6e-47
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 185 7e-47
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 184 8e-47
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 184 1e-46
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 184 1e-46
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 184 1e-46
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 183 2e-46
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 183 2e-46
Medtr6g460480.1 | organelle transcript processing protein, putat... 182 5e-46
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 180 2e-45
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 179 4e-45
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 178 7e-45
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 178 8e-45
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 178 8e-45
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 177 2e-44
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 176 3e-44
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 176 3e-44
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 173 2e-43
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 173 2e-43
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 171 8e-43
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 171 9e-43
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 168 8e-42
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 159 4e-39
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 155 7e-38
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 154 1e-37
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 152 4e-37
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 149 3e-36
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4... 145 5e-35
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 138 7e-33
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:... 138 9e-33
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:... 138 9e-33
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:... 137 2e-32
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:... 137 2e-32
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:... 135 7e-32
Medtr2g022040.1 | PPR containing plant-like protein | HC | chr2:... 133 2e-31
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:... 132 6e-31
Medtr1g040705.2 | PPR containing plant-like protein | HC | chr1:... 132 6e-31
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:... 130 1e-30
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:... 130 2e-30
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:... 121 1e-27
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:... 117 1e-26
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:... 110 2e-24
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 106 4e-23
Medtr4g084790.1 | PPR domain protein | HC | chr4:33048235-330493... 104 9e-23
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 104 2e-22
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 102 7e-22
Medtr8g015530.1 | PPR repeat protein | LC | chr8:5078258-5077407... 101 8e-22
Medtr4g023520.1 | PPR repeat protein | LC | chr4:7956288-7959311... 99 4e-21
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 96 5e-20
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 93 3e-19
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 93 3e-19
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 88 1e-17
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 86 4e-17
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 86 6e-17
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 86 7e-17
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 1e-16
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 84 1e-16
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 83 3e-16
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:... 83 3e-16
Medtr3g007795.1 | PPR containing plant-like protein | HC | chr3:... 82 5e-16
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 82 7e-16
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 9e-16
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 82 9e-16
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 82 1e-15
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 81 1e-15
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:... 81 2e-15
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 81 2e-15
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 2e-15
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 80 2e-15
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 80 3e-15
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 80 3e-15
Medtr2g069700.1 | PPR containing plant-like protein | LC | chr2:... 79 4e-15
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 5e-15
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 79 5e-15
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 79 8e-15
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 79 8e-15
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 79 9e-15
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 79 9e-15
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 78 1e-14
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 1e-14
Medtr2g007050.1 | PPR containing plant-like protein | HC | chr2:... 78 1e-14
Medtr3g051150.1 | editing factor, putative | LC | chr3:20182043-... 77 2e-14
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 77 2e-14
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 77 3e-14
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 77 3e-14
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 76 4e-14
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 76 4e-14
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 76 4e-14
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 76 4e-14
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 76 4e-14
Medtr2g094423.1 | PPR containing plant-like protein | LC | chr2:... 76 5e-14
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 76 5e-14
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 5e-14
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 5e-14
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 5e-14
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 76 6e-14
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 76 6e-14
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 75 6e-14
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 75 1e-13
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 75 1e-13
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 74 2e-13
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 74 2e-13
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 74 2e-13
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 74 2e-13
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 74 2e-13
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 74 2e-13
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 3e-13
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 73 4e-13
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 73 4e-13
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 73 4e-13
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 5e-13
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 73 5e-13
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 5e-13
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 72 5e-13
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 5e-13
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 72 6e-13
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 72 6e-13
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 6e-13
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 7e-13
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 72 7e-13
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 72 7e-13
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 9e-13
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 1e-12
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 71 2e-12
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 2e-12
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 70 2e-12
Medtr7g095380.1 | PPR repeat protein | HC | chr7:38183678-381831... 70 2e-12
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 70 3e-12
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 70 3e-12
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 70 3e-12
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 70 4e-12
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 70 4e-12
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 4e-12
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 69 5e-12
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 5e-12
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 6e-12
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 69 7e-12
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 69 7e-12
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 7e-12
Medtr1g080120.2 | PPR containing plant-like protein | HC | chr1:... 69 7e-12
Medtr1g080120.1 | PPR containing plant-like protein | HC | chr1:... 69 7e-12
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 7e-12
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 69 8e-12
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 8e-12
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 69 9e-12
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 69 9e-12
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 69 9e-12
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 69 9e-12
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 69 9e-12
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 68 1e-11
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 68 1e-11
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 68 1e-11
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 68 1e-11
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 1e-11
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 68 2e-11
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 68 2e-11
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 67 2e-11
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 67 2e-11
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 67 2e-11
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 67 2e-11
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 67 2e-11
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 2e-11
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 67 3e-11
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 67 3e-11
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 66 4e-11
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 66 4e-11
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 66 4e-11
Medtr7g058380.1 | PPR repeat protein | HC | chr7:21009807-210090... 66 4e-11
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 66 4e-11
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 66 4e-11
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 66 4e-11
Medtr7g073260.1 | PPR containing plant-like protein | HC | chr7:... 66 4e-11
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 66 6e-11
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 66 6e-11
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 6e-11
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 65 7e-11
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 65 8e-11
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 65 8e-11
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 65 8e-11
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 65 8e-11
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 9e-11
Medtr4g072990.1 | PPR containing plant-like protein | HC | chr4:... 65 1e-10
Medtr4g072990.2 | PPR containing plant-like protein | HC | chr4:... 65 1e-10
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 1e-10
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 1e-10
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 1e-10
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 64 2e-10
Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-10
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-10
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-10
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-10
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 64 2e-10
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-10
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 2e-10
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 64 3e-10
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 3e-10
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 64 3e-10
Medtr5g012260.1 | PPR superfamily protein, putative | HC | chr5:... 63 3e-10
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 63 3e-10
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 63 3e-10
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 63 3e-10
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 63 4e-10
Medtr1g040765.1 | PPR containing plant-like protein | HC | chr1:... 63 4e-10
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 63 5e-10
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 63 5e-10
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 62 5e-10
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 62 7e-10
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 62 7e-10
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 8e-10
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 62 9e-10
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 62 9e-10
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 9e-10
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 62 1e-09
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 62 1e-09
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 62 1e-09
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:... 62 1e-09
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 62 1e-09
Medtr2g007030.1 | PPR containing plant-like protein | HC | chr2:... 61 1e-09
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 61 1e-09
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 61 1e-09
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 61 1e-09
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 61 2e-09
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 61 2e-09
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 61 2e-09
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 61 2e-09
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 60 2e-09
Medtr3g033040.1 | PPR containing plant-like protein | HC | chr3:... 60 2e-09
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 60 3e-09
Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 60 3e-09
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 60 3e-09
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 60 3e-09
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 3e-09
Medtr7g072070.1 | PPR containing plant-like protein | HC | chr7:... 60 3e-09
Medtr7g056613.1 | PPR containing plant-like protein | HC | chr7:... 60 3e-09
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 60 4e-09
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 60 4e-09
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 60 4e-09
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 60 4e-09
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 60 4e-09
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 60 4e-09
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 59 4e-09
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 59 5e-09
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 5e-09
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 59 6e-09
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 59 6e-09
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 59 7e-09
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 59 7e-09
Medtr1g108270.1 | PPR containing plant-like protein | HC | chr1:... 59 9e-09
Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 1e-08
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 58 1e-08
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 58 1e-08
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 1e-08
Medtr3g033040.2 | PPR containing plant-like protein | HC | chr3:... 58 1e-08
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 58 1e-08
Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 1e-08
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 553 bits (1426), Expect = e-158, Method: Compositional matrix adjust.
Identities = 262/329 (79%), Positives = 296/329 (89%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP KN VSWNSII CHVQEG +AEA++LF RMC SGVM ++ TLV+ILSSCSHMGDLALG
Sbjct: 327 MPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALG 386
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+AH YI DNNIT+S TLCN++++MYAKCGALQTAMD+FFGMP+KN VSWNVIIGALALH
Sbjct: 387 KQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALH 446
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G GKEAIEMFEKM+ASG+ PDEITFTGLLSACSHSGLV+ G++YF +M+ TFGISPDV H
Sbjct: 447 GYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEH 506
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YACMVDLLGR G LGEA+SLI+K+P+KPD VVW ALLGAC+T+GNL +GKQI+KQLLELG
Sbjct: 507 YACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELG 566
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
RY+SGLYVLLSNMYSESQRWDDMK I KI++ +GIKKCRAIS IEIDGCCYQFMVDDK H
Sbjct: 567 RYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDDKRH 626
Query: 302 EVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
STSIYSM+ QLMDHLKS GYPCKH DV
Sbjct: 627 GASTSIYSMLGQLMDHLKSAGYPCKHLDV 655
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 121/252 (48%), Gaps = 33/252 (13%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+ VSWNS+I+ + + G+ EA+ +F M G+ PD TLV +LS + G+ LG+
Sbjct: 198 RTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFV 257
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTA---------------------------- 96
H ++ I + + N+LM+MYAKCG L+ A
Sbjct: 258 HLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLI 317
Query: 97 ---MDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
++ F MP KNVVSWN II G EA+++F +M SG+ ++ T +LS+C
Sbjct: 318 DCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSC 377
Query: 154 SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV 213
SH G + +G+ + I+ ++D+ + G L AM + +P K +AV
Sbjct: 378 SHMGDLALGKQAHSYIFDN-NITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEK-NAVS 435
Query: 214 WGALLGACKTFG 225
W ++GA G
Sbjct: 436 WNVIIGALALHG 447
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 2/236 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P N +N +I + +++ L+ RM G++P+ T+ +L +C+ LG
Sbjct: 94 IPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLG 153
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H + + N+++N+Y CG + +A +F + ++ +VSWN +I +
Sbjct: 154 VCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKM 213
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA+ MF +M+ GL PD T GLLS + G ++GR+ M T GI D
Sbjct: 214 GRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVT-GIEIDSIV 272
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++D+ + G L A S+ ++ + D V W ++ A G ++ + Q+
Sbjct: 273 TNALMDMYAKCGNLKCAKSVFDQM-LDKDVVSWTCMINAYANHGLIDCALEFFNQM 327
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 299 bits (766), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 139/328 (42%), Positives = 213/328 (64%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P + V+W+++I+ V+ G + A++LF M V GV PD T+VS+LS+C+ +G L LGK
Sbjct: 189 PKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGK 248
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
Y+ NI SV LCN+L++M+AKCG + A+ +F M + +VSW +I LA+HG
Sbjct: 249 WVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHG 308
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
G +A+ +F++M +G+ PD++ F G+LSACSHSGLV+ GRYYFG M F I P V HY
Sbjct: 309 RGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHY 368
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
CMVDLL RGGF+ EA +QK+P +P+ ++W ++ AC G L++G+ I K+L++
Sbjct: 369 GCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEP 428
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHE 302
YVLLSN+Y++ ++W+ K+R++M+ G+KK + IE++ Y+F+ DK+H+
Sbjct: 429 MHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHD 488
Query: 303 VSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
IY MVD++ +K GY S V
Sbjct: 489 QYKEIYEMVDEMGREIKKAGYVPTTSQV 516
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 113/242 (46%), Gaps = 5/242 (2%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCR-MCVSGVMPDNATLVSILSSCSHMGDLALG 61
P +A +N++I + Q LF R M GV P+ T +L C+ +G L LG
Sbjct: 85 PSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLG 144
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCG--ALQTAMDIFFGMPQKNVVSWNVIIGALA 119
K H + V + N+L++MY G + A +F P+ + V+W+ +I
Sbjct: 145 KCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFV 204
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G A+++F +M+ G+ PDEIT +LSAC+ G +E+G++ + I V
Sbjct: 205 RLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKK-NIPKSV 263
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D+ + G + +A+ L +++ + V W +++ G + +++E
Sbjct: 264 ELCNALIDMFAKCGNVDKAIKLFRQMDSR-TIVSWTSVIAGLAMHGRGLDAVSLFDEMVE 322
Query: 240 LG 241
G
Sbjct: 323 NG 324
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M + VSW S+I+ G+ +A+ LF M +G+ PD+ + +LS+CSH G + G
Sbjct: 289 MDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKG 348
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
+ + N +I V ++++ + G ++ A + MP + N + W II A
Sbjct: 349 RYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTII--TA 406
Query: 120 LHGSGK 125
H +G+
Sbjct: 407 CHATGE 412
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 299 bits (766), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/320 (45%), Positives = 209/320 (65%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K+ V WN+IIS VQ Q EA+ LF M + + PD T+V+ LS+CS +G L +G
Sbjct: 351 IPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVG 410
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H YI + +++ V L +L++MYAKCG + A+ +F +PQ+N ++W +I LALH
Sbjct: 411 IWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALH 470
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ ++A+ F KM G+ PDEITF G+LSAC H GLVE GR YF MSS F +SP + H
Sbjct: 471 GNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKH 530
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+CMVDLLGR G L EA L++ +PM DA V GAL AC+ +GN+++G++ +LLE+
Sbjct: 531 YSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEID 590
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
DSG YVLL++MYSE++ W + + RK+MND G++K S +EI+G ++F+V D +H
Sbjct: 591 PQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSH 650
Query: 302 EVSTSIYSMVDQLMDHLKSV 321
S IY + L L +
Sbjct: 651 PQSEWIYECLVTLTKQLDVI 670
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 33/269 (12%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V++ V+WNS+I+ V+ G EA++++ M V P+ T++ ++SSCS + DL LGK+
Sbjct: 221 VRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKE 280
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAM-------------------------- 97
H YI ++ + ++ L N+LM+MY KCG L TA
Sbjct: 281 FHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGF 340
Query: 98 -----DIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA 152
+I + +P+K+VV WN II GKEA+ +F +M+ + PD++T LSA
Sbjct: 341 LDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSA 400
Query: 153 CSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAV 212
CS G +++G + + +S DVA +VD+ + G + A+ + +++P + + +
Sbjct: 401 CSQLGALDVGIWIHHYIER-HKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQR-NCL 458
Query: 213 VWGALLGACKTFGNLEMGKQILKQLLELG 241
W A++ GN + +++ +G
Sbjct: 459 TWTAVICGLALHGNAQDALSYFSKMIHIG 487
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 3/235 (1%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVM-PDNATLVSILSSCSHMGDLALGKKA 64
N SWN+ I +V+ G L+ RM + G + PDN T +L C LG
Sbjct: 121 NVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGV 180
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
++ + + N+ + M CG L A D+F +++V+WN +I G
Sbjct: 181 LGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLA 240
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EAI+++++M A + P+EIT G++S+CS + +G+ + + G+ +
Sbjct: 241 IEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKE-HGLEFTIPLTNA 299
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D+ + G L A L + K V W ++ FG L++ ++IL ++ E
Sbjct: 300 LMDMYVKCGELLTARVLFDNMAQK-TLVSWTTMVLGYARFGFLDVAREILYKIPE 353
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/314 (44%), Positives = 204/314 (64%), Gaps = 1/314 (0%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P KNAV W+++I+ + Q + E+++LF M GV+P TLVS+LS+C + L LG
Sbjct: 338 PRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGD 397
Query: 63 KAHDY-ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H Y + I +SVTL N++++MYAKCG++ A ++F MP++N++SWN +I A +
Sbjct: 398 WIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAAN 457
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G K+AI +F++MR G P+ ITF LL+ACSH GL+ GR YF M +GI P+ H
Sbjct: 458 GRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGH 517
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YACMVDLLGR G L EA LI +PM+P WGALL AC+ GN+E+ + LL L
Sbjct: 518 YACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLD 577
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
DSG+YVLL+N + ++W D++++R +M D G+KK S IEIDG +F+V D++H
Sbjct: 578 PEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFLVADESH 637
Query: 302 EVSTSIYSMVDQLM 315
S IY ++++++
Sbjct: 638 PQSEEIYKVLEEIL 651
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 32/268 (11%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V+W ++I + EAME+F M +S V P+ TL++++S+CS MG+L +GK+
Sbjct: 208 KDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRV 267
Query: 65 HDYICDNNITVSVTLCNSLMNM-------------------------------YAKCGAL 93
H+ + + N+ S++L N+L++M YAKCG L
Sbjct: 268 HEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDL 327
Query: 94 QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
++A F P+KN V W+ +I + + KE++++F +M G+ P E T +LSAC
Sbjct: 328 ESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSAC 387
Query: 154 SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV 213
+ +G + I V +VD+ + G + A + +P + + +
Sbjct: 388 GQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPER-NLIS 446
Query: 214 WGALLGACKTFGNLEMGKQILKQLLELG 241
W ++ G + + Q+ +G
Sbjct: 447 WNTMIAGYAANGRAKQAINVFDQMRNMG 474
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 2/231 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N WN++I + + A F M V D+ + V L +C + G+ +
Sbjct: 108 NTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVY 167
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ + + N L++ YA+ G L+ A +F K+VV+W +I A H +
Sbjct: 168 CVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSE 227
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+E+FE M S + P+E+T ++SACS G +EMG+ + + ++ + +
Sbjct: 228 EAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEK-NMRCSLSLHNAL 286
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
+D+ + L +A L ++ K D W +++ G+LE ++ Q
Sbjct: 287 LDMYVKCDCLVDARELFDRMATK-DVYSWTSMVNGYAKCGDLESARRFFDQ 336
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N +SWN++I+ + G+ +A+ +F +M G P+N T VS+L++CSH G ++ G
Sbjct: 439 MPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEG 498
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
++ D + I ++++ + G L+ A + MP Q +W ++ A
Sbjct: 499 REYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACR 558
Query: 120 LHGS 123
+HG+
Sbjct: 559 MHGN 562
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 139/309 (44%), Positives = 199/309 (64%), Gaps = 1/309 (0%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P KNAV W+++I+ + Q + E+++LF M GV+P TLVS+LS+C + L LG
Sbjct: 288 PRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGD 347
Query: 63 KAHDY-ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H Y + I +SVTL N++++MYAKCG++ A ++F MP++N++SWN +I A +
Sbjct: 348 WIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAAN 407
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G K+AI +F++MR G P+ ITF LL+ACSH GL+ GR YF M +GI P+ H
Sbjct: 408 GRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGH 467
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YACMVDLLGR G L EA LI +PM+P WGALL AC+ GN+E+ + LL L
Sbjct: 468 YACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLD 527
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
DSG+YVLL+N + ++W D++++R +M D G+KK S IEIDG +F+V D++H
Sbjct: 528 PEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFLVADESH 587
Query: 302 EVSTSIYSM 310
S IY +
Sbjct: 588 PQSEEIYKL 596
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 32/268 (11%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V+W ++I + EAME+F M +S V P+ TL++++S+CS MG+L +GK+
Sbjct: 158 KDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRV 217
Query: 65 HDYICDNNITVSVTLCNSLMNM-------------------------------YAKCGAL 93
H+ + + N+ S++L N+L++M YAKCG L
Sbjct: 218 HEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDL 277
Query: 94 QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
++A F P+KN V W+ +I + + KE++++F +M G+ P E T +LSAC
Sbjct: 278 ESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSAC 337
Query: 154 SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV 213
+ +G + I V +VD+ + G + A + +P + + +
Sbjct: 338 GQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPER-NLIS 396
Query: 214 WGALLGACKTFGNLEMGKQILKQLLELG 241
W ++ G + + Q+ +G
Sbjct: 397 WNTMIAGYAANGRAKQAINVFDQMRNMG 424
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 5/271 (1%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N WN++I + + A F M V D+ + V L +C + G+ +
Sbjct: 58 NTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVY 117
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ + + N L++ YA+ G L+ A +F K+VV+W +I A H +
Sbjct: 118 CVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSE 177
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+E+FE M S + P+E+T ++SACS G +EMG+ + + ++ + +
Sbjct: 178 EAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEK-NMRCSLSLHNAL 236
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
+D+ + L +A L ++ K D W +++ G+LE ++ Q R ++
Sbjct: 237 LDMYVKCDCLVDARELFDRMATK-DVYSWTSMVNGYAKCGDLESARRFFDQ---TPRKNA 292
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGI 276
+ + YS++ + + K+ M + G+
Sbjct: 293 VCWSAMIAGYSQNNKPKESLKLFHEMMERGV 323
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N +SWN++I+ + G+ +A+ +F +M G P+N T VS+L++CSH G ++ G
Sbjct: 389 MPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEG 448
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
++ D + I ++++ + G L+ A + MP Q +W ++ A
Sbjct: 449 REYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACR 508
Query: 120 LHGS 123
+HG+
Sbjct: 509 MHGN 512
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/322 (44%), Positives = 204/322 (63%), Gaps = 1/322 (0%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
PVKN V W +IIS + ++GQ EAM L M SG+ D+ +SIL++C+ G L LGK
Sbjct: 279 PVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGK 338
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALALH 121
K HD + S + NS ++MYAKCG + A +F GM +K++VSWN +I +H
Sbjct: 339 KMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIH 398
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+++IE+F M G PD TF GLL AC+H+GLV GR YF M +GI P + H
Sbjct: 399 GHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEH 458
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDLLGRGG L EA L++ +P +P+A++ G LLGAC+ ++++ + K L +L
Sbjct: 459 YGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLFKLV 518
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
D G + LLSN+Y++S W ++ K+RK MND G +K +SSIE++ ++F V D +H
Sbjct: 519 PSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDWSH 578
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
S IY+M+D+L+ L+ VGY
Sbjct: 579 PKSGDIYNMIDRLVHDLRQVGY 600
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 135/281 (48%), Gaps = 19/281 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELF---CRMCVSGVMPDNATLVSILSSCSHMGD- 57
+P N +N +I + G + ++ F +M V GV+ DN T +L C+
Sbjct: 80 VPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSW 139
Query: 58 LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
L+L K H ++ + + NSL++ Y +CG ++ AM +F GM +++VVSWN ++G
Sbjct: 140 LSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGG 199
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
L +G A+++F++M D +++ +L + +G ++ F M+
Sbjct: 200 LVKNGDLDGALKVFDEMPER----DRVSWNTMLDGFTKAGEMDKAFKLFERMAER----- 250
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
D+ ++ MV + G + A L + P+K + V+W ++ G ++ + ++
Sbjct: 251 DIVSWSTMVCGYSKNGDMDMARMLFDRCPVK-NLVLWTTIISGYAEKGQVKEAMNLCDEM 309
Query: 238 LELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIK 277
+ G R D G ++ + +ES M + K M+DS ++
Sbjct: 310 EKSGLRLDDGFFISILAACAES----GMLGLGKKMHDSFLR 346
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M K+ VSWNS+I G +++ELF M G PD T + +L +C+H G +
Sbjct: 379 MKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNE 438
Query: 61 GKKAHDYICDN--NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGA 117
G + + Y I + ++++ + G L+ A + MP + N + ++GA
Sbjct: 439 G-RGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGA 497
Query: 118 LALHGSGKEA 127
+H K A
Sbjct: 498 CRMHNDVKLA 507
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 205/329 (62%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ VSW+++IS + Q G +EA+ LF M + G+ PD +VS++S+C+HM L LG
Sbjct: 400 MVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDETAIVSVISACTHMAALDLG 459
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H YI N V+V L +L++MY KCG ++ A+++F+ M +K V +WN +I LA++
Sbjct: 460 KWIHAYISKNEFNVNVILGTTLVDMYMKCGCVENALEVFYAMEEKGVSTWNALILGLAMN 519
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++++ +F M+ + P+EITF G+L AC H GLV+ GR YF M+ I P+V H
Sbjct: 520 GLVEKSLNVFADMKKTKTLPNEITFMGVLGACRHMGLVDEGRRYFSSMTQEHKIEPNVKH 579
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDLLGR G L EA LI+ +PM PD WGALLGAC+ N EMG+++ ++L++L
Sbjct: 580 YGCMVDLLGRAGLLKEAEELIESMPMAPDVATWGALLGACRKHHNNEMGERLGRKLIQLQ 639
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
G +VLLSN+Y+ W D+ +IR IM G+ K S IE +G ++F+ DK H
Sbjct: 640 PDHDGFHVLLSNIYASKGNWGDVLEIRGIMAQHGVVKMPGCSMIEANGIVHEFLAGDKTH 699
Query: 302 EVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
I M++++ LK GY S+V
Sbjct: 700 PQIKDIEHMLNEVAAKLKIEGYAPITSEV 728
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 33/245 (13%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ VSW+++ISC+ Q G EA+ LF M +GVM D +VS +S+C+ + + +G+
Sbjct: 271 KDMVSWSAMISCYEQNGMCEEALVLFVDMNANGVMVDEVVVVSAISACTSLSAVRMGRSV 330
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG---------------------- 102
H I V+L N+L+++Y+ CG + A IF G
Sbjct: 331 HGLAAKIGIQDYVSLQNALIHLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMCGYV 390
Query: 103 ---------MPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
M +K+VVSW+ +I A HG EA+ +F++M+ G+ PDE ++SAC
Sbjct: 391 EDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDETAIVSVISAC 450
Query: 154 SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV 213
+H +++G++ +S + +V +VD+ + G + A+ + + K
Sbjct: 451 THMAALDLGKWIHAYISKN-EFNVNVILGTTLVDMYMKCGCVENALEVFYAMEEK-GVST 508
Query: 214 WGALL 218
W AL+
Sbjct: 509 WNALI 513
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 20/270 (7%)
Query: 6 NAVSWNSIISCHVQ-EGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
N WN+I+ H++ +A+ + PD+ T +L SC+ GK+
Sbjct: 108 NTFIWNTIMRSHLELHNSPQQALNFYKLFLFQNTSPDHYTYPILLRSCTARVSEPEGKQI 167
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
HD++ V + N+L+N+YA CG + +A +F ++VSWN ++ G
Sbjct: 168 HDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWNTLLAGYVNLGDV 227
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA +++KM + I ++ G + R F + D+ ++
Sbjct: 228 VEAECVYDKMPVR----NTIASNSMIVLFGKEGCIAKARSLFDRIEGK-----DMVSWSA 278
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
M+ + G EA+ L + D VV + + AC + + MG+ + ++G
Sbjct: 279 MISCYEQNGMCEEALVLFVDMNANGVMVDEVVVVSAISACTSLSAVRMGRSVHGLAAKIG 338
Query: 242 RYDSGLYVLLSN----MYSESQRWDDMKKI 267
D YV L N +YS D +KI
Sbjct: 339 IQD---YVSLQNALIHLYSNCGEILDAQKI 365
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 109/229 (47%), Gaps = 10/229 (4%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
N++I+ + G A ++F V+ D + ++L+ ++GD+ + +D +
Sbjct: 184 NTLINLYAVCGNMVSAHKVF----KESVVLDLVSWNTLLAGYVNLGDVVEAECVYDKMPV 239
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEM 130
N S NS++ ++ K G + A +F + K++VSW+ +I +G +EA+ +
Sbjct: 240 RNTIAS----NSMIVLFGKEGCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCEEALVL 295
Query: 131 FEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLG 190
F M A+G+ DE+ +SAC+ V MGR GL ++ GI V+ ++ L
Sbjct: 296 FVDMNANGVMVDEVVVVSAISACTSLSAVRMGRSVHGL-AAKIGIQDYVSLQNALIHLYS 354
Query: 191 RGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
G + +A + + D V W +++ G +E K++ ++E
Sbjct: 355 NCGEILDAQKIFSGGVLL-DLVSWNSMISGYLMCGYVEDAKKLFDSMVE 402
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 207/331 (62%), Gaps = 6/331 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N VSWN++I+ + Q G++ EA+ LF + + P + T ++L++C+++ DL LG++A
Sbjct: 348 RNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQA 407
Query: 65 HDYICDNNITVS------VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
H +I + + + NSL++MY KCG ++ +F M +++ VSWN +I
Sbjct: 408 HTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGY 467
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
A +G G EA+E+F +M SG PD +T G+LSACSH+GLVE GR YF M+ G+ P
Sbjct: 468 AQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPV 527
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
HY CMVDLLGR G L EA +LIQ +PM+PDAVVWG+LL ACK GN+ +GK + ++LL
Sbjct: 528 KDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLL 587
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
E+ +SG YVLLSNMY+E RW D+ ++RK M G+ K S I I + FMV D
Sbjct: 588 EIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKD 647
Query: 299 KNHEVSTSIYSMVDQLMDHLKSVGYPCKHSD 329
K H IY ++ L + +K VGY + D
Sbjct: 648 KRHPHKKDIYLILKILTEQMKRVGYVPEADD 678
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 134/277 (48%), Gaps = 38/277 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V+N VSWNS+I+C+ Q G +A+E+F RM G+ PD TL S+ S+C+ + + G
Sbjct: 212 MDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREG 271
Query: 62 KKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP---------------- 104
+ H + ++ + L N+L++MYAKC + A +F MP
Sbjct: 272 LQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAK 331
Query: 105 ---------------QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGL 149
++NVVSWN +I +G +EA+ +F ++ ++P TF L
Sbjct: 332 ASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNL 391
Query: 150 LSACSHSGLVEMGRY-YFGLMSSTF----GISPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
L+AC++ +++GR + ++ F G D+ ++D+ + G + + + ++
Sbjct: 392 LNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFER 451
Query: 205 LPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ ++ D V W A++ G +I +++L G
Sbjct: 452 M-LERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSG 487
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 118/238 (49%), Gaps = 1/238 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ SWN+++S Q + EA+ M + + + S LS+C+ + DL++G
Sbjct: 111 MPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIG 170
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H I + ++ V + ++L++MY+KC + +A F M +N+VSWN +I +
Sbjct: 171 VQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQN 230
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +A+E+F +M G+ PDEIT + SAC+ + G + D+
Sbjct: 231 GPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVL 290
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+VD+ + + EA + ++P++ D V +++ +++ + + ++E
Sbjct: 291 GNALVDMYAKCRRVNEARLVFDRMPLR-DVVSETSMVSGYAKASSVKAARLMFSNMME 347
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 119/294 (40%), Gaps = 68/294 (23%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF 100
D++ +L +C + + H I + + + N L+++Y KCG L+ A +F
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 101 FGMPQKNVVSWNVIIGALALHGSGKEAIEMFE---------------------------- 132
M Q+N SWN ++GAL G+ EA+ +F+
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137
Query: 133 ---KMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLL 189
M + +E +F LSAC+ + +G GL++ + S DV + +VD+
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKS-RYSLDVYMGSALVDMY 196
Query: 190 GR-------------------------------GGFLGEAMSLIQKL---PMKPDAVVWG 215
+ G G+A+ + ++ ++PD +
Sbjct: 197 SKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLA 256
Query: 216 ALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMKKI 267
++ AC + + G QI ++++ +Y + L + L +MY++ +R ++ + +
Sbjct: 257 SVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLV 310
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 279 bits (714), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 128/323 (39%), Positives = 206/323 (63%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M ++ V+WNS+I+ G+ EA+ LF M + GV PD T+VS+ S+C+ +G L L
Sbjct: 200 LMGERDLVAWNSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALEL 259
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ H Y+ +T ++ + NSL++ YAKCG+++ A +F M ++NVVSW ++ LA+
Sbjct: 260 GRRVHVYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAV 319
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G G+EA+ +F++M + P EITF G+L ACSH G+++ G YF M +GI P +
Sbjct: 320 NGFGEEALGLFKEMERQKIVPREITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPRIE 379
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVDLL R G + A IQ +PM+P+AV+W LLGAC G+L +G+ LL+L
Sbjct: 380 HYGCMVDLLSRAGLVKRAYEYIQSMPMQPNAVIWRTLLGACTVHGDLSLGEIARSHLLKL 439
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
SG YVLLSN+Y+ +RW D++ +R+ M + G+ K S +E+ ++F + D++
Sbjct: 440 EPKHSGDYVLLSNLYASERRWSDVQTVRRSMIEDGVWKTPGYSLVELGNRVFEFTMGDRS 499
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H S +Y++++++ + LK GY
Sbjct: 500 HPRSQDVYALLEKITELLKLEGY 522
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 119/235 (50%), Gaps = 6/235 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N +WN++I + + A+ L+ +M S V PD T +L + S ++ G+ H
Sbjct: 104 NVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKAISKSLNVRDGEMIH 163
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
N + + NSL+++YA CG ++A +F M ++++V+WN +I AL+G
Sbjct: 164 SVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWNSVINGFALNGKPN 223
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+ +F +M G+ PD T L SAC+ G +E+GR + G++ ++ +
Sbjct: 224 EALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVHVYLLKV-GLTGNLHVNNSL 282
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG--ACKTFGNLEMG--KQILKQ 236
+D + G + EA + ++ + + V W +L+ A FG +G K++ +Q
Sbjct: 283 LDFYAKCGSIREAQQVFSEMSER-NVVSWTSLVVGLAVNGFGEEALGLFKEMERQ 336
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/322 (42%), Positives = 200/322 (62%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ +SW S+++ + Q H E++++FC M V+GV PD + SILS+C+ + L G
Sbjct: 396 MLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFG 455
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + + S ++ NSL+ MYAKCG L A IF M K+V++W II A +
Sbjct: 456 KQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQN 515
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+ +++ ++ M +SG PD ITF GLL ACSH+GLV+ GR YF M+ +GI P H
Sbjct: 516 GKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEH 575
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YACM+DL GR G L EA L+ ++ +KPDA VW +LL AC+ NLE+ ++ L EL
Sbjct: 576 YACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELE 635
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
++ YV+LSNMYS S++W+D+ KIRK+M GI K S +EI+ F+ DD+ H
Sbjct: 636 PMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGH 695
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
IY+ +D+++ +K GY
Sbjct: 696 PREAEIYTKIDEIILRIKEAGY 717
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 32/295 (10%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN V W ++++ + Q G +A+E F M GV + T +IL++CS + G++
Sbjct: 199 KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQV 258
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H +I + +V + ++L++MYAKCG L+ A ++ M +VVSWN ++ HG
Sbjct: 259 HGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLE 318
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSAC---------SHSGLVEMGRYYFGLMSSTFG- 174
+EA+ +F+ M + D+ TF +L+ C H +++ G + L+S+
Sbjct: 319 EEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVD 378
Query: 175 ------------------ISPDVAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVV 213
+ DV + +V + E++ + ++ + PD +
Sbjct: 379 MYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFI 438
Query: 214 WGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKI 267
++L AC LE GKQ+ ++ G R+ +Y L MY++ DD I
Sbjct: 439 VASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAI 493
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 35/269 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELF----------------------CR------- 32
MP K+ SWN++IS +V G+ EA ELF C+
Sbjct: 62 MPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLF 121
Query: 33 --MCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKC 90
M + G TL S+L CS +G + G+ H ++ N +V + L++MYAKC
Sbjct: 122 RSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKC 181
Query: 91 GALQTAMDIFFGMP--QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
+ A +F G+ +KN V W ++ A +G G +A+E F M A G+ ++ TF
Sbjct: 182 KCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPT 241
Query: 149 LLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK 208
+L+ACS G G + + G +V + +VD+ + G L A ++++ +
Sbjct: 242 ILTACSSVLARCFGEQVHGFIVKS-GFGSNVYVQSALVDMYAKCGDLKNAKNMLETME-D 299
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQL 237
D V W +L+ G E ++ K +
Sbjct: 300 DDVVSWNSLMVGFVRHGLEEEALRLFKNM 328
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 6/218 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M + VSWNS++ V+ G EA+ LF M + D+ T S+L+ C +G +
Sbjct: 297 MEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSIN-P 354
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H I + N+L++MYAK G + A +F M +K+V+SW ++ A +
Sbjct: 355 KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQN 414
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR-YYFGLMSSTFGISPDVA 180
S +E++++F MR +G+ PD+ +LSAC+ L+E G+ + + S S V
Sbjct: 415 NSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSV- 473
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
Y +V + + G L +A ++ + +K D + W A++
Sbjct: 474 -YNSLVAMYAKCGCLDDADAIFVSMQVK-DVITWTAII 509
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/330 (40%), Positives = 212/330 (64%), Gaps = 1/330 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
MP +N SWN +I +V+ G +E +E F RM V G V+P++ TLV++LS+CS +G L +
Sbjct: 264 MPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDM 323
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK H Y ++ + N L++MYAKCG ++ A+ +F + +K+++SWN II LA+
Sbjct: 324 GKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAI 383
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG +A+ MF++M++ G PD +TF G+LSAC+H GLV+ G YF M + I P +
Sbjct: 384 HGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIE 443
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVDLLGR G L +A++ I+K+P++PDAV+W ALLGAC+ + N+E+ + L++L+EL
Sbjct: 444 HYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIEL 503
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ +V++SN+Y + R +D+ +++ M D+G +K S IE + +F D+
Sbjct: 504 EPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDER 563
Query: 301 HEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
H + SIY ++ L L+S GY SDV
Sbjct: 564 HSETESIYRVLKGLTMLLRSHGYVPNLSDV 593
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 126/293 (43%), Gaps = 47/293 (16%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P N +WN++ ++Q G H + + LF + MP+ T I+ SC + + G
Sbjct: 70 IPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREG 129
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + + + SL++MY+K G ++ A +F M ++NVV W II L
Sbjct: 130 EEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILC 189
Query: 122 G---SGKE----------------------------AIEMFEKMRASGLFPDEITFTGLL 150
G SG+ A E+F+KM D +++ +L
Sbjct: 190 GDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNR----DTMSWNAML 245
Query: 151 SACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK-- 208
+ + +G VEM F M +V + ++ + G E + +++ ++
Sbjct: 246 NGYAVNGEVEMFEKVFDEMPER-----NVFSWNGLIGGYVKNGLFSETLESFKRMLVEGH 300
Query: 209 --PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSE 257
P+ A+L AC G L+MGK + +G Y L+V +L +MY++
Sbjct: 301 VIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIG-YKGNLFVGNVLIDMYAK 352
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 126/313 (40%), Positives = 208/313 (66%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPV+ VSW ++I+ + + G + +A+++F M + G+ PD +++++L +C+ +G L +G
Sbjct: 203 MPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVG 262
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H Y N +CN+L+ MYAKCG + A ++F + +K+V+SW+ +IG LA H
Sbjct: 263 KWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANH 322
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G EAI++FE+M + P+EITF G+L ACSH+GL + G YF +MS+++ I P++ H
Sbjct: 323 GKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEH 382
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C++DLLGR G LG+A+ I K+P+KPD+ +W +LL +C+ NL++ +KQL+EL
Sbjct: 383 YGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELE 442
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+SG YVLL+NMY+E +W+D+ IRK++ + IKK SSIE++ +F+ D +
Sbjct: 443 PEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSSDDSK 502
Query: 302 EVSTSIYSMVDQL 314
S ++ +++ L
Sbjct: 503 PFSQEVFWILEGL 515
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 117/266 (43%), Gaps = 36/266 (13%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRM---CVSGVMPDNATLVSILSSCSHMGDLALGK 62
N ++N+II + H+ A+ +F +M + V PD T ++ SC+ + LG
Sbjct: 72 NIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGM 131
Query: 63 KAH--------DYICDNNITV-----------------------SVTLCNSLMNMYAKCG 91
+ H D+ C + V NSL+ Y K G
Sbjct: 132 QVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLG 191
Query: 92 ALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLS 151
+ +A ++F MP + +VSW +I G +A+++F +M+ G+ PDEI+ +L
Sbjct: 192 QMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLP 251
Query: 152 ACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDA 211
AC+ G +E+G+ + + + G ++++ + G + EA +L +L ++ D
Sbjct: 252 ACAQLGALEVGK-WIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQL-VEKDV 309
Query: 212 VVWGALLGACKTFGNLEMGKQILKQL 237
+ W ++G G Q+ +++
Sbjct: 310 ISWSTMIGGLANHGKGYEAIQLFEEM 335
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 126/313 (40%), Positives = 208/313 (66%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPV+ VSW ++I+ + + G + +A+++F M + G+ PD +++++L +C+ +G L +G
Sbjct: 203 MPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVG 262
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H Y N +CN+L+ MYAKCG + A ++F + +K+V+SW+ +IG LA H
Sbjct: 263 KWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANH 322
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G EAI++FE+M + P+EITF G+L ACSH+GL + G YF +MS+++ I P++ H
Sbjct: 323 GKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEH 382
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C++DLLGR G LG+A+ I K+P+KPD+ +W +LL +C+ NL++ +KQL+EL
Sbjct: 383 YGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELE 442
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+SG YVLL+NMY+E +W+D+ IRK++ + IKK SSIE++ +F+ D +
Sbjct: 443 PEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSSDDSK 502
Query: 302 EVSTSIYSMVDQL 314
S ++ +++ L
Sbjct: 503 PFSQEVFWILEGL 515
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 117/266 (43%), Gaps = 36/266 (13%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRM---CVSGVMPDNATLVSILSSCSHMGDLALGK 62
N ++N+II + H+ A+ +F +M + V PD T ++ SC+ + LG
Sbjct: 72 NIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGM 131
Query: 63 KAH--------DYICDNNITV-----------------------SVTLCNSLMNMYAKCG 91
+ H D+ C + V NSL+ Y K G
Sbjct: 132 QVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLG 191
Query: 92 ALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLS 151
+ +A ++F MP + +VSW +I G +A+++F +M+ G+ PDEI+ +L
Sbjct: 192 QMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLP 251
Query: 152 ACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDA 211
AC+ G +E+G+ + + + G ++++ + G + EA +L +L ++ D
Sbjct: 252 ACAQLGALEVGK-WIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQL-VEKDV 309
Query: 212 VVWGALLGACKTFGNLEMGKQILKQL 237
+ W ++G G Q+ +++
Sbjct: 310 ISWSTMIGGLANHGKGYEAIQLFEEM 335
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/316 (41%), Positives = 199/316 (62%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V++N+II + + EA+ LF + G+ P + T++ +LSSC+ +G L LG+ H+Y
Sbjct: 179 VAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEY 238
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ V + +L++MYAKCG+L A+++F MP+++ +W+ II A A HG G +A
Sbjct: 239 VKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQA 298
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
I M +M+ + PDEITF G+L ACSH+GLVE G YF M++ +GI P + HY CMVD
Sbjct: 299 ISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVD 358
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
LLGR G L EA I +LP+KP ++W LL AC T GN+EMGK++++++ EL G
Sbjct: 359 LLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGD 418
Query: 248 YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSI 307
YV+ SN+ + +WDD+ +RK M D G K SSIE++ ++F + H ST++
Sbjct: 419 YVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTL 478
Query: 308 YSMVDQLMDHLKSVGY 323
+ +D+L+ LKS GY
Sbjct: 479 HRALDELVKELKSAGY 494
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 103/194 (53%), Gaps = 5/194 (2%)
Query: 49 LSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV 108
L S + LA GK+ H + ++ ++ + +L+NMY CG + + +F + + V
Sbjct: 119 LRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCV 178
Query: 109 VSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL 168
V++N II +LA + EA+ +F +++ GL P ++T +LS+C+ G +++GR+
Sbjct: 179 VAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEY 238
Query: 169 MSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
+ +G V ++D+ + G L +A+++ + +P K D W A++ A T G+
Sbjct: 239 VKK-YGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMP-KRDTQAWSAIIVAYATHGD-- 294
Query: 229 MGKQILKQLLELGR 242
G Q + L E+ +
Sbjct: 295 -GFQAISMLNEMKK 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ +W++II + G +A+ + M V PD T + IL +CSH G + G
Sbjct: 274 MPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEG 333
Query: 62 -KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV-VSWNVIIGALA 119
+ H + I S+ ++++ + G L A +P K + W ++ A +
Sbjct: 334 FEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACS 393
Query: 120 LHGS---GKEAIE-MFEKMRASGLFPDEITFTGL 149
HG+ GK IE +FE + G D + F+ L
Sbjct: 394 THGNVEMGKRVIERIFELDDSHG--GDYVIFSNL 425
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 127/285 (44%), Positives = 197/285 (69%), Gaps = 1/285 (0%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
PVK+ VSWN++I+ +V G +A+ELF MC +GV PD TL+S+LS+C+ +GDL GK
Sbjct: 232 PVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGK 291
Query: 63 KAHDYICDNNI-TVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + + ++ +S L N+L++MYAKCG ++ ++D+F+ + K+V+SWN +I +ALH
Sbjct: 292 KVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALH 351
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G GKE++ +F+ M+ + + P+EITF G+L ACSH+G ++ G YF LMSS + I P++ H
Sbjct: 352 GHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRH 411
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
CMVD+LGR G L EA I + ++P+A++W LL ACK G++E+ K ++L +
Sbjct: 412 CGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMR 471
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
+ SG YVL+SN+Y+ WD +K+RK+M+DSG+ K R S +E
Sbjct: 472 KDHSGDYVLMSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFVE 516
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 111/214 (51%), Gaps = 11/214 (5%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
NAV N+++ H + G A LF C V+ S+++ + GDL + +K
Sbjct: 142 NAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVV----AWSSLIAGYARRGDLKVARKLF 197
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ + + ++ N ++ Y K G +++A +F P K+VVSWN +I + G K
Sbjct: 198 NEMPERDLVS----WNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSK 253
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG-RYYFGLMSSTFGISPDVAHYAC 184
+A+E+F +M +G+FPDE+T LLSAC+ G +E G + + +M + G + A
Sbjct: 254 QALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNA- 312
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
++D+ + G + E++ + + K D + W +++
Sbjct: 313 LIDMYAKCGNIKESLDVFWSITDK-DVISWNSVI 345
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 14/261 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + +N +I Q A+ L+ M V D+ T +L +C+ + + G
Sbjct: 68 IPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNTG 127
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H + + + N+L+ +AKCG L A +F + +VV+W+ +I A
Sbjct: 128 SAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARR 187
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G K A ++F +M L + TG + G +E R F DV
Sbjct: 188 GDLKVARKLFNEMPERDLVSWNVMITGYVK----QGEMESARMLFDEAPVK-----DVVS 238
Query: 182 YACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ M+ G +A+ L ++ + PD V +LL AC G+LE GK++ +++
Sbjct: 239 WNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVM 298
Query: 239 EL--GRYDSGLYVLLSNMYSE 257
E+ G+ + L L +MY++
Sbjct: 299 EISMGKLSTLLGNALIDMYAK 319
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 275 bits (703), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 206/322 (63%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ V W+++IS + + Q EA++LF M +PD T++S++S+CSH+G LA
Sbjct: 314 MIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQA 373
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H Y+ + ++++ N+L++MYAKCG L A ++F MP+KNV+SW+ +I A A+H
Sbjct: 374 NWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMH 433
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ AI++F +M+ + P+ +TF G+L AC H+GLVE G F M + GISP H
Sbjct: 434 GNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREH 493
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDL R FL +A+ LI+ +P P+ ++WG+L+ AC+ G E+G+ K+LLEL
Sbjct: 494 YGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELE 553
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
G V+LSN+Y++ +RW+D+ IRK M+ GI K +A S IEI+ + FM+ D+ H
Sbjct: 554 PDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYH 613
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+ S IY +D+++ LK VGY
Sbjct: 614 KQSDEIYEKLDEVVSKLKLVGY 635
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 137/274 (50%), Gaps = 35/274 (12%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+AV+WN II + Q G + +A+ LF M S + PD+ L ++LS+C H G+L+ G+ H
Sbjct: 186 DAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIH 245
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG----------------------- 102
+++ DN + L +L+NMYA CGA+ A I+ G
Sbjct: 246 EFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVK 305
Query: 103 --------MPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
M ++++V W+ +I A +EA+++F++M PD+IT ++SACS
Sbjct: 306 DARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACS 365
Query: 155 HSGLVEMGRYYFGLM-SSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV 213
H G + + + S FG + V + ++D+ + G L +A + + +P K + +
Sbjct: 366 HVGALAQANWIHTYVDRSGFGRALSVNN--ALIDMYAKCGNLVKAREVFENMPRK-NVIS 422
Query: 214 WGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
W +++ A GN + ++ +++ E+ +G+
Sbjct: 423 WSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGV 456
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 2/199 (1%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF 100
D + S+L + S + G + H + L+ MYA C + A +F
Sbjct: 120 DRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLF 179
Query: 101 FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE 160
M + V+WN+II +G +A+ +FE MR+S + PD + +LSAC H+G +
Sbjct: 180 DKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLS 239
Query: 161 MGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
GR + G + D ++++ G + A + L K +V A+L
Sbjct: 240 YGRTIHEFVKDN-GYAIDSHLQTALINMYANCGAMDLARKIYDGLSSK-HLIVSTAMLSG 297
Query: 221 CKTFGNLEMGKQILKQLLE 239
G ++ + I Q++E
Sbjct: 298 YAKLGMVKDARFIFDQMIE 316
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 274 bits (701), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 131/331 (39%), Positives = 206/331 (62%), Gaps = 3/331 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM--CVSGVMPDNATLVSILSSCSHMGDLA 59
+P K+ +SWN++++ + Q G +EA++ + M C +P+ T VSI+ + SH+G L
Sbjct: 385 LPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEEC-RDTIPNQGTWVSIIPAYSHVGALQ 443
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G K H + N++ + V + L+++Y KCG L+ AM +F+ +P+ V WN II +L
Sbjct: 444 QGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLG 503
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+HG G+EA+++F+ M A + D ITF LLSACSHSGLV+ G+ F +M +GI P +
Sbjct: 504 IHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSL 563
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY CMVDLLGR G+L +A L++ +P++PDA +WGALL ACK +GN E+G +LLE
Sbjct: 564 KHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLE 623
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
+ + G YVLLSN+Y+ +++W+ + K+R + D G++K SS+ + F ++
Sbjct: 624 VDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQ 683
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
H T IY + L +KS+GY +S V
Sbjct: 684 THPKYTEIYKELKVLSAKMKSLGYVPDYSFV 714
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 147/281 (52%), Gaps = 8/281 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V++ VSWNSII+ + Q + A+ F M + G+ PD T+VS+ S S + D +
Sbjct: 283 MEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRIS 342
Query: 62 KKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ ++ + V + N+L+NMYAK G + A +F +P+K+ +SWN ++
Sbjct: 343 RSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQ 402
Query: 121 HGSGKEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMG-RYYFGLMSSTFGISPD 178
+G EAI+ + M P++ T+ ++ A SH G ++ G + + L+ ++ + D
Sbjct: 403 NGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL--D 460
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
V C++DL G+ G L +AMSL ++P + +V W A++ + G E Q+ K +L
Sbjct: 461 VFVATCLIDLYGKCGRLEDAMSLFYEIP-RDTSVPWNAIIASLGIHGRGEEALQLFKDML 519
Query: 239 -ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMN-DSGIK 277
E + D +V L + S S D+ +K IM + GIK
Sbjct: 520 AERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIK 560
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 1/217 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPVK+ SWN++IS Q G A A+ + RM GV D T+ SIL C+ D+ G
Sbjct: 182 MPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVING 241
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H ++ + + V + N+L+NMY+K G LQ A +F M +++VSWN II A +
Sbjct: 242 VLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQN 301
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
A+ F+ M+ G+ PD +T L S S + R G + + DV
Sbjct: 302 NDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVI 361
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+V++ + G++ A ++ +LP K D + W L+
Sbjct: 362 GNALVNMYAKLGYMNCAHTVFDQLPRK-DTISWNTLV 397
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 129/260 (49%), Gaps = 14/260 (5%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAM----ELFCRMCVSG-VMPDNATLVSILSSCSHMGDLA 59
KN SWNSIIS +V+ G++ EAM +LF MC G + PD T IL +C + D
Sbjct: 83 KNIFSWNSIISAYVRFGKYHEAMNCVNQLFS-MCGGGHLRPDFYTFPPILKACVSLVD-- 139
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
GKK H + V + SL+++Y++ G L A +F MP K+V SWN +I
Sbjct: 140 -GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFC 198
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+G+ A+ + +M+ G+ D IT +L C+ S V G L G+ DV
Sbjct: 199 QNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVING-VLIHLHVLKHGLDSDV 257
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++++ + G L +A + ++ ++ D V W +++ A + + + K ++
Sbjct: 258 FVSNALINMYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTALRFFKG-MQ 315
Query: 240 LG--RYDSGLYVLLSNMYSE 257
LG R D V L++++S+
Sbjct: 316 LGGIRPDLLTVVSLTSIFSQ 335
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 14/190 (7%)
Query: 42 NATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFF 101
+A ++ +SC ++ KK H + + ++ L L+N+Y G + + F
Sbjct: 22 DADFNALFNSCVNVN---ATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFD 78
Query: 102 GMPQKNVVSWNVIIGALALHGSGKEAI----EMFEKMRASGLFPDEITFTGLLSACSHSG 157
+ +KN+ SWN II A G EA+ ++F L PD TF +L AC
Sbjct: 79 YIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VS 136
Query: 158 LVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGAL 217
LV+ + + + G DV A +V L R G L A + +P+K D W A+
Sbjct: 137 LVDGKKVHCCVFK--MGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNAM 193
Query: 218 L-GACKTFGN 226
+ G C+ GN
Sbjct: 194 ISGFCQN-GN 202
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 274 bits (701), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 210/321 (65%), Gaps = 2/321 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDNATLVSILSSCSHMGDLA 59
+MP +N VSW +++S ++Q Q+ +A+ LF RM V P+ TL S+L +C+++G L
Sbjct: 170 LMPSRNVVSWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALE 229
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ-KNVVSWNVIIGAL 118
+G++ Y N ++ +CN+++ MYAKCG + A +F + + +N+ SWN +I L
Sbjct: 230 IGQRVEVYARKNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGL 289
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
A+HG +AI+++++M G PD++TF GLL AC+H G+VE G++ F M+ F I P
Sbjct: 290 AVHGQCHKAIQLYDQMLREGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPK 349
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ HY CMVDLLGR G L EA +I+++PMKPD+V+WG LLGAC GN+E+ + + L
Sbjct: 350 LEHYGCMVDLLGRAGRLTEAYEVIKRMPMKPDSVIWGTLLGACSFHGNVELAEVAAESLF 409
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
L ++ G YV+LSN+Y+ + +WD + K+RK+M S I K S IE G ++F+V+D
Sbjct: 410 VLEPWNPGNYVILSNIYASAGKWDGVAKLRKVMKGSKITKTAGQSFIEEGGQLHKFIVED 469
Query: 299 KNHEVSTSIYSMVDQLMDHLK 319
++H S+ I+++++ + + +K
Sbjct: 470 RSHSESSEIFALLNGVYEMIK 490
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 113/275 (41%), Gaps = 66/275 (24%)
Query: 29 LFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYA 88
L+ +M + G P+ T + ++C+ + L+LG+ H + V +L++MYA
Sbjct: 66 LYSQMYLHGHSPNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALLDMYA 125
Query: 89 KCGAL-------------------------------QTAMDIFFGMPQKNVVSWNVIIGA 117
K G L + A+++F+ MP +NVVSW ++
Sbjct: 126 KLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSG 185
Query: 118 LALHGSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYY------FGLMS 170
+ ++A+ +F +M R + P+E+T +L AC++ G +E+G+ G
Sbjct: 186 YLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYARKNGFFK 245
Query: 171 STFGISPDVAHYA-C--------MVDLLGRGGFLGEAMSLIQKLPMK------------- 208
+ F + + YA C + D +GR L S+I L +
Sbjct: 246 NLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQM 305
Query: 209 ------PDAVVWGALLGACKTFGNLEMGKQILKQL 237
PD V + LL AC G +E GK + + +
Sbjct: 306 LREGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSM 340
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/329 (41%), Positives = 203/329 (61%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ VS+++IIS VQ G +A+ +F +M SG+ P T++++L +CSH+ L G
Sbjct: 373 MIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHG 432
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H Y T ++CN++++MY+KCG + + +IF M ++++SWN +I +H
Sbjct: 433 TCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIH 492
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EA+ +F++++A GL PD++T +LSACSHSGLV G+Y+F MS F I P +AH
Sbjct: 493 GLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAH 552
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDLL R G L EA + IQ++P P+ +WGALL AC+T N+EMG+Q+ K++ LG
Sbjct: 553 YICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLG 612
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+G +VL+SN+YS RWDD IR I G KK S +EI G + F+ ++H
Sbjct: 613 PEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSH 672
Query: 302 EVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
S SI + +L+ +K +GY S V
Sbjct: 673 PQSASINKKLQELLVQMKKLGYRADSSFV 701
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 44/266 (16%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDNATLVSILSSCSHMGDLALGKK 63
KN V W+++I +V ++A+ L+ M C+ G+ P ATL ++L +C+ + DL GKK
Sbjct: 274 KNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKK 333
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H ++ + + + T+ NSL++MYAKCG + A+ M K+ VS++ II +G
Sbjct: 334 LHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGY 393
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSH---------------------------- 155
++A+ +F +M++SG+ P T LL ACSH
Sbjct: 394 AEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNA 453
Query: 156 -------SGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP-- 206
G + + R F M + D+ + M+ G G EA+SL Q+L
Sbjct: 454 IIDMYSKCGKITISREIFDRMQNR-----DIISWNTMIIGYGIHGLCVEALSLFQELQAL 508
Query: 207 -MKPDAVVWGALLGACKTFGNLEMGK 231
+KPD V A+L AC G + GK
Sbjct: 509 GLKPDDVTLIAVLSACSHSGLVTEGK 534
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 3/238 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V+WN++I+ HA+ + +M +GV P+++TLVSIL + L GK
Sbjct: 173 RDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAI 232
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H Y N +V L +L++MYAKC L A IF + +KN V W+ +IG LH S
Sbjct: 233 HAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSI 292
Query: 125 KEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+A+ +++ M GL P T +L AC+ ++ G+ M + G+ D
Sbjct: 293 SDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS-GMDLDTTVGN 351
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++ + + G + A+ + ++ K D V + A++ C G E I +Q+ G
Sbjct: 352 SLISMYAKCGIMDNAVGFLDEMIAK-DTVSYSAIISGCVQNGYAEKALLIFRQMQSSG 408
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + V WN +I + G +++ L+ M GV P N T +L +CS + L LG
Sbjct: 67 IPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLG 126
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ--KNVVSWNVIIGALA 119
+ H + +++ + + +L++MYAKCG L A +F + +++V+WN +I A +
Sbjct: 127 RLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFS 186
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
H + I +M+ +G+ P+ T +L + + G+ F +V
Sbjct: 187 FHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFD-NV 245
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
++D+ + L A + + K D V W A++G
Sbjct: 246 VLQTALLDMYAKCHLLFYARKIFNTVNKKND-VCWSAMIG 284
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 93 LQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA 152
+Q A +F +P+ +VV WN++I A G +++I ++ M G+ P TF LL A
Sbjct: 57 IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKA 116
Query: 153 CSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK-PDA 211
CS +++GR + G+S D+ ++ + + G L +A +L + + D
Sbjct: 117 CSSLQALQLGR-LIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDI 175
Query: 212 VVWGALLGA 220
V W A++ A
Sbjct: 176 VAWNAMIAA 184
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 208/329 (63%), Gaps = 4/329 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ +SWN++I + + EA+ LF M S V P++ T + IL +C+ +G L LGK
Sbjct: 327 KDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWV 386
Query: 65 HDYICDNNITVS--VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H YI D N+ S +L SL++MYAKCG ++ A +F M +N+ SWN ++ A+HG
Sbjct: 387 HAYI-DKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHG 445
Query: 123 SGKEAIEMFEKMRASGLF-PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+ A+ +F +M GLF PD+ITF G+LSAC+ +GLV++G YF M +GISP + H
Sbjct: 446 HAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQH 505
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CM+DLL R EA L++ + M+PD +WG+LL ACK G +E G+ + ++L +L
Sbjct: 506 YGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLE 565
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
++G +VLLSN+Y+ + RWDD+ +IR +ND G+KK +SIEIDG ++F+V DK H
Sbjct: 566 PENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFH 625
Query: 302 EVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
+IY M++++ L+ G+ S+V
Sbjct: 626 PECNNIYKMLNEVDKLLEENGFVPNTSEV 654
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 136/242 (56%), Gaps = 1/242 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+PVK+ VSWN++IS +VQ G+ EA+ F M + V+P+ +T+V +LS+C H LG
Sbjct: 223 IPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELG 282
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K ++ DN ++ L N+L++MY KCG A ++F G+ +K+V+SWN +IG +
Sbjct: 283 KWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYL 342
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+EA+ +FE M S + P+++TF G+L AC+ G +++G++ + S + +
Sbjct: 343 SLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASL 402
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ ++D+ + G + A + + + + + W A+L G+ E + +++ G
Sbjct: 403 WTSLIDMYAKCGCIEAAERVFRSMHSR-NLASWNAMLSGFAMHGHAERALALFSEMVNKG 461
Query: 242 RY 243
+
Sbjct: 462 LF 463
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 140/346 (40%), Gaps = 68/346 (19%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N WNS+I + ++ LF RM GV P++ T + SC+ GK+ H
Sbjct: 95 NVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLH 154
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGA-------------------------------LQ 94
+ + + + S+++MYA G L
Sbjct: 155 AHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLD 214
Query: 95 TAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
A +F +P K+VVSWN +I G +EAI F +M+ + + P++ T +LSAC
Sbjct: 215 DARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACG 274
Query: 155 HSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL--------LGRGGFLG---------- 196
H+ E+G+ + G G ++ ++D+ + R F G
Sbjct: 275 HTRSGELGK-WIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWN 333
Query: 197 -------------EAMSLIQ---KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
EA++L + + +KP+ V + +L AC G L++GK + + +
Sbjct: 334 TMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKN 393
Query: 241 GRYDSG--LYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISS 284
R S L+ L +MY++ + +++ + M+ + A+ S
Sbjct: 394 LRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLS 439
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 207/323 (64%), Gaps = 1/323 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M K+ V+W +I C+ + E++ LF R+ G + D +V+++++C+ +G +
Sbjct: 161 VMVSKDLVTWTVMIGCYADYDAY-ESLVLFDRLREEGFVSDKVAMVTVVNACAKLGAMHR 219
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ ++YIC N +++ V L ++++MYAKCG + +A ++F M +KNV+SW+ +I A
Sbjct: 220 ARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVISWSAMIAAYGY 279
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG GKEA+++F M + G+ P+ ITF LL ACSHSGL + G ++F M +G+ PDV
Sbjct: 280 HGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLTDEGLHFFDSMWRDYGVRPDVK 339
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY C+VDLLGR G L EA+ LI+ + ++ D +W ALLGAC+ GN+E+ ++ + LLEL
Sbjct: 340 HYTCVVDLLGRAGRLDEALKLIETMNVEKDERLWSALLGACRVHGNMELAGKVAESLLEL 399
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ G+YVLLSN+Y+++ +W+ + + R +M +KK + IE+D YQF V D++
Sbjct: 400 QPKNPGIYVLLSNIYAKAGKWEKVGEFRDLMTQRKLKKVPGWTWIEVDNKTYQFSVGDRS 459
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H S IY M+ ++ L+ VGY
Sbjct: 460 HPQSKEIYEMLTSVIKKLEMVGY 482
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 117/233 (50%), Gaps = 6/233 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ +W+ ++ + G + F + + PDN TL ++ +C D+ +G
Sbjct: 61 MPTRDPTTWSIMVGGFSKLGDYNNCYATFREILRCNITPDNYTLPFVIRACRDRKDIQMG 120
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ HD + + + +C +L++MYAKC ++ A +F M K++V+W V+IG A +
Sbjct: 121 RMIHDVVLKYGLVLDHFVCATLVDMYAKCAVIEDARKLFDVMVSKDLVTWTVMIGCYADY 180
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
E++ +F+++R G D++ +++AC+ G + R+ + G+S DV
Sbjct: 181 -DAYESLVLFDRLREEGFVSDKVAMVTVVNACAKLGAMHRARFVNEYICGN-GLSLDVIL 238
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
M+D+ + G + A + ++ K + + W A++ A +G GK+ L
Sbjct: 239 GTAMIDMYAKCGCVDSAREVFDRMKEK-NVISWSAMIAA---YGYHGKGKEAL 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEM 130
NN+ V+ N L++ Y + A+ A +F MP ++ +W++++G + G
Sbjct: 33 NNLIVA----NKLLHFYVQHKAINDAYYLFDEMPTRDPTTWSIMVGGFSKLGDYNNCYAT 88
Query: 131 FEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC--MVDL 188
F ++ + PD T ++ AC ++MGR ++ +G+ D H+ C +VD+
Sbjct: 89 FREILRCNITPDNYTLPFVIRACRDRKDIQMGRMIHDVVLK-YGLVLD--HFVCATLVDM 145
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
+ + +A L + K D V W ++G
Sbjct: 146 YAKCAVIEDARKLFDVMVSK-DLVTWTVMIG 175
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/322 (41%), Positives = 201/322 (62%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ V W+++I + G EA+ELF M V PD +V LSSC+ +G L LG
Sbjct: 266 MVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELG 325
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
A + + L SL++ YAKCG+++ A+ ++ M +K+ V +N +I LA++
Sbjct: 326 NWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMY 385
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G A +F +M G+ P+E TF GLL C+H+GLV+ GR+YF MS F ++P + H
Sbjct: 386 GQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEH 445
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDLL R GFL EA +LI+ +PMK + +VWG+LLG C+ ++ + +LKQL+EL
Sbjct: 446 YGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELE 505
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
++SG YVLLSN+YS S+RWD+ +KIR +N+ G++K S +E+DG ++F+V D +H
Sbjct: 506 PWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSH 565
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+S IY ++ L LK GY
Sbjct: 566 PLSQKIYEKLESLFKDLKEAGY 587
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 135/240 (56%), Gaps = 2/240 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M VKN VSW +I ++ G+ EA++LF + SG+ PD +V +L +C+ +GDL G
Sbjct: 165 MVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESG 224
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ + + ++ +V + SL++MY KCG+++ A +F GM +K++V W+ +I A +
Sbjct: 225 RWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASN 284
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EAIE+F +MR + PD G LS+C+ G +E+G + GLM+ +S V
Sbjct: 285 GLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLG 344
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ ++D + G + EA+ + K+ + D VV+ A++ +G + + Q+ + G
Sbjct: 345 TS-LIDFYAKCGSMEEALG-VYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFG 402
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 2/213 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N +N++I V + + A+ L+ M + ++PD+ T +L +C+ + LG H
Sbjct: 68 NTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIH 127
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ V + +++ Y+KCG L+ A +F M KNVVSW +I G +
Sbjct: 128 SLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFR 187
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+++F + SGL PD +L AC+ G +E GR+ M G+S +V +
Sbjct: 188 EAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMREC-GLSRNVFVATSL 246
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
VD+ + G + EA + + ++ D V W A++
Sbjct: 247 VDMYTKCGSMEEARFVFDGM-VEKDIVCWSAMI 278
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MM K+ V +N++IS GQ A +F +M G+ P+ T V +L C+H G +
Sbjct: 366 MMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDD 425
Query: 61 GKKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGAL 118
G+ + + D ++T ++ ++++ A+ G L A ++ GMP K NV+ W ++G
Sbjct: 426 GRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGC 485
Query: 119 ALHGSGKEAIEMFEKM 134
LH + A + +++
Sbjct: 486 RLHRETQLAEHVLKQL 501
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 94 QTAMDIFFGMP-QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA 152
Q + +F P N +N +I + A+ ++ M + + PD TF+ +L A
Sbjct: 54 QYPILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKA 113
Query: 153 CSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAV 212
C+ L +G L+ T G DV +V + GFL +A + + +K + V
Sbjct: 114 CARLNLFHLGVMIHSLVFKT-GFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVK-NVV 171
Query: 213 VWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYS-------ESQRWDDMK 265
W ++ C FG + + LLE G G +V++ + + ES RW D
Sbjct: 172 SWTGMICGCIEFGKFREAVDLFRGLLESGLRPDG-FVIVRVLRACARLGDLESGRWID-- 228
Query: 266 KIRKIMNDSGIKKCRAISSIEID 288
+ M + G+ + +++ +D
Sbjct: 229 ---RCMRECGLSRNVFVATSLVD 248
>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0013:48776-47089 | 20130731
Length = 558
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/323 (40%), Positives = 207/323 (64%), Gaps = 2/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ SWN++IS Q + EA+ LF RM G P++ T++ LS+CS +G L G
Sbjct: 146 MDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKEG 205
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALAL 120
+ H Y+ D + +V +CN++++M+AKCG + A +F M +K++++WN +I A A+
Sbjct: 206 EIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMIMAFAM 265
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G G +A+++ ++M G PD +++ G L AC+H+GLV+ G F LM + G+ +V
Sbjct: 266 NGDGYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGVRLFDLMKVS-GVKLNVK 324
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY MVDLLGR G L EA +I +PM PD V+W +LLGACKT+GN+EM + K+L+E+
Sbjct: 325 HYGSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQSLLGACKTYGNVEMAEMASKKLVEM 384
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
G SG +VLLSN+Y+ QRW D+ ++R+ M DS ++K S E+DG ++F+ D++
Sbjct: 385 GSNSSGDFVLLSNVYAAQQRWKDVGRVREAMVDSDVRKVPGFSYTEVDGRIHKFINYDQS 444
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H S IY+ +D++ +K GY
Sbjct: 445 HPNSKEIYAKLDEIKFRIKEYGY 467
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 7/226 (3%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRM--CVSGVMPDNATLVSILSSCSHMGDLAL 60
P N +N+I+ Q + +++ + M CV V D T L C+ +
Sbjct: 48 PTTN--DYNAILRGLAQSSEPTQSISWYRDMLCCVQRV--DALTCSFALKGCARALAFSE 103
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H + V L +L+++YAK G + A +F M ++++ SWN +I LA
Sbjct: 104 ATQLHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYARKVFDEMDKRDIASWNAMISGLAQ 163
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
EAI +F +M+ G P+++T G LSACS G ++ G + + +V
Sbjct: 164 GSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKEGEIVHRYVLDE-KLDRNVI 222
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
++D+ + GF+ +A S+ + + + + W ++ A G+
Sbjct: 223 VCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMIMAFAMNGD 268
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 202/324 (62%), Gaps = 2/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ ++WN+ IS + Q G EA+ LF M +GV P+ TL ++LS+C+ +G L LG
Sbjct: 280 MPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLG 339
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ +Y + + + +L++MYAKCG+L++A +F MP+KN SWN +I ALA H
Sbjct: 340 KQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASH 399
Query: 122 GSGKEAIEMFEKMRASG--LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G KEA+ +FE+M G P++ITF LLSAC H+GLV+ G F +MS+ FG+ P +
Sbjct: 400 GKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKI 459
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY+CMVDLL R G L EA +I+K+P KPD V GAL AC+ N+++G+++++ LLE
Sbjct: 460 EHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLE 519
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
L +SG Y++ S +Y WDD ++R +M ++G+ K S IE+ +F+ D
Sbjct: 520 LDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDG 579
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
S + +++D L + LK GY
Sbjct: 580 LTLDSIDVRNIIDLLYEELKKEGY 603
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 139/238 (58%), Gaps = 3/238 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLALGKK 63
K+ VSWNS++S + + G EA+E+F R+ SG PD +LVS+L +C +GDL LG+
Sbjct: 181 KDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRW 240
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
++ + + V+ + ++L++MY+KCG L ++ IF GMP ++ ++WN I A A +G
Sbjct: 241 VEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGM 300
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
EAI +F M+ +G+ P+++T T +LSAC+ G +++G+ ++ G+ D+
Sbjct: 301 ADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGK-QMDEYATHRGLQHDIFVAT 359
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D+ + G L A + +P K DA W A++ A + G + + +++ + G
Sbjct: 360 ALIDMYAKCGSLESAQRVFNDMPRKNDA-SWNAMISALASHGKAKEALSLFERMSDEG 416
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 131/283 (46%), Gaps = 38/283 (13%)
Query: 26 AMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMN 85
+ L+ +M + P+N T + +C+++ ++ + + AH + + NS++
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 86 MYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMR-ASGLFPDEI 144
MY +CG A +F + +K++VSWN ++ A G +EA+E+F ++R SG PDE+
Sbjct: 161 MYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEM 220
Query: 145 TFTGLLSACSHSGLVEMGRYYFGL-------MSSTFG----------------------- 174
+ +L AC G +E+GR+ G ++S G
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 175 ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGK 231
S D + + + G EA+SL + + P+ V A+L AC + G L++GK
Sbjct: 281 PSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGK 340
Query: 232 QILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIMND 273
Q+ + G ++D + L +MY++ ++ +++ ND
Sbjct: 341 QMDEYATHRGLQHDIFVATALIDMYAKC---GSLESAQRVFND 380
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 201/317 (63%), Gaps = 1/317 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K+ VSW S+IS VQ E+++LF M SG PD L S+LS+C+ +G L G
Sbjct: 268 IPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYG 327
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H+YI + I V + SL++MYAKCG ++ A +F +P KN+ +WN IG LA++
Sbjct: 328 RWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAIN 387
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS-TFGISPDVA 180
G G+EA++ F + SG P+EITF + SAC HSGLV+ GR YF M+S + +SP +
Sbjct: 388 GHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLE 447
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVDLL R + EAM LI K+PM PD + GALL A T+GN+E+ ++LK +
Sbjct: 448 HYGCMVDLLCRAELVEEAMELINKMPMPPDVQIIGALLSASSTYGNVELTPEMLKTVRNF 507
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+SG+YVLLSN Y+ +++W +++ +R++M + GI K S I +DG ++F+V D N
Sbjct: 508 ECQESGVYVLLSNWYANNKKWAEVRSVRRLMKEKGISKAPGSSLIRVDGKSHKFVVGDNN 567
Query: 301 HEVSTSIYSMVDQLMDH 317
H S I+ +++ L +
Sbjct: 568 HPQSEDIHVLLNILANQ 584
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 128/237 (54%), Gaps = 8/237 (3%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MPV++ VSW +IS +++ G +A+ LF RM V P+ AT VSIL +C +G L L
Sbjct: 169 FMPVRDVVSWTGLISGYMKAGLFNDAVALFLRM---DVAPNAATFVSILGACGKLGCLNL 225
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK H + + + N+LM+MY KC ++ A +F +P+K++VSW +I L
Sbjct: 226 GKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQ 285
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+ +E++++F +M SG PD + T +LSAC+ GL++ GR+ + + I DV
Sbjct: 286 YQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHS-RIKWDVH 344
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++D+ + G + A + LP K + W A +G G+ G++ LKQ
Sbjct: 345 IGTSLIDMYAKCGCIEMAQQMFNLLPSK-NIRTWNAYIGGLAINGH---GQEALKQF 397
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 5/208 (2%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
N IIS + A+ ++ + +G +PD T+ ++L SC+ +A K+ H
Sbjct: 78 NLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVK 137
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEM 130
++ + + NS +++Y+ CG A +F MP ++VVSW +I G +A+ +
Sbjct: 138 TDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVAL 197
Query: 131 FEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLG 190
F +M + P+ TF +L AC G + +G+ GL+S + ++ ++D+
Sbjct: 198 FLRMDVA---PNAATFVSILGACGKLGCLNLGKGIHGLVSK-YPHGKELVVSNTLMDMYV 253
Query: 191 RGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ + +A L ++P K D V W +++
Sbjct: 254 KCESVTDAKRLFDEIPEK-DIVSWTSMI 280
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 123/324 (37%), Positives = 205/324 (63%), Gaps = 2/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
+P K+ +SW +++SC+++ ++ E ++LF M G V+PD + +++S+C+H+G L
Sbjct: 202 IPSKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLGALGF 261
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+ H Y+ + + V + +SL++MYAKCG+L+ ++ +F+ + +KN+ WN +I LA
Sbjct: 262 GKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSLLVFYKLKEKNLFCWNSMIDGLAA 321
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG KEA+ MF +M G+ P+ +TF +L+AC+H+G ++ GR +F M + ISP V
Sbjct: 322 HGYAKEALRMFAEMEREGIRPNRVTFVSVLTACTHAGFIQEGRRFFTSMIEDYCISPQVE 381
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVDLL +GG L +A+ +I+ + +P++ +WGALL CK NLE+ + ++ L+ L
Sbjct: 382 HYGCMVDLLSKGGLLEDALEMIRGMRFEPNSFIWGALLNGCKVHRNLEIARVTVRNLMIL 441
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGI-KKCRAISSIEIDGCCYQFMVDDK 299
+SG Y LL NMY+E RW D+ KIR M D G+ K+C S IEI+ + F DK
Sbjct: 442 EPSNSGHYSLLVNMYAEVNRWSDVAKIRTEMKDLGVEKRCPGSSWIEINKEIHVFAASDK 501
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
H ++ ++ +L + L+ G+
Sbjct: 502 CHPSYGQVHLLLVELDEQLRLAGF 525
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 100/232 (43%), Gaps = 12/232 (5%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N + +N++I V +A+ + M S V+P + + S++ +C+ + D GK H
Sbjct: 42 NTLVYNALIKACVHSHSSNQALLHYIHMLRSSVIPSSYSFSSLIKACTLLTDAVNGKTLH 101
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
++ V + +L+ Y+ G + A +F M ++V +W +I A + +
Sbjct: 102 GHVWKYGFDSHVFVQTTLVEFYSSLGYVCDARKVFDEMSARDVYAWTTMISAYVRNNDVE 161
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
A +F +M + T+ ++ + G +E ++F + S D+ + +
Sbjct: 162 SAEILFVEMPEG---KNTATWNAVIDGYAKLGNIERVEFFFKEIP-----SKDIISWTTL 213
Query: 186 VDLLGRGGFLGEAMSLIQKL----PMKPDAVVWGALLGACKTFGNLEMGKQI 233
+ + GE + L ++ + PD V ++ AC G L GK++
Sbjct: 214 MSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLGALGFGKEV 265
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 268 bits (684), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 208/324 (64%), Gaps = 2/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSW++II+ +VQ G EA++ F +M S V P+ T+VS L++CS++ L G
Sbjct: 203 MHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQG 262
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALAL 120
K H YI +NI ++ L SL++MYAKCG + +A +F ++ V WN +IG A+
Sbjct: 263 KWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAM 322
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG +EAI +FEKM+ + P+++TF LL+ACSH +V+ G+ YF LM+S +GI+P++
Sbjct: 323 HGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIE 382
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVDLL R G L ++ +I +PM PD +WGALL AC+ + ++E G +I + + E+
Sbjct: 383 HYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEI 442
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIR-KIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
G VLL N+YS S RW++ + +R K +S KK SSIE++G ++F+V D+
Sbjct: 443 DPNHIGCNVLLGNIYSTSGRWNEARMVREKNEINSDRKKIPGFSSIELNGVFHEFLVGDR 502
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
+H S IYS +D+++ LK GY
Sbjct: 503 SHPQSREIYSFLDEMISKLKIAGY 526
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
N+++ Y G + A ++F M +++VVSW+ II G EA++ F KM S +
Sbjct: 181 NTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVK 240
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
P+E T L+ACS+ ++ G++ + I + A ++D+ + G + A S
Sbjct: 241 PNEYTMVSALAACSNLVALDQGKWIHVYIRRD-NIKMNDRLLASLIDMYAKCGEIDSASS 299
Query: 201 LIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ + +K W A++G G E + +++
Sbjct: 300 VFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKM 336
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 268 bits (684), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 129/323 (39%), Positives = 196/323 (60%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MMP ++ VSW +II+ + Q G + EA+ +F + G + AT LS+C+ + L L
Sbjct: 353 MMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALEL 412
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+ H + N+L+ MY KCG++ A D F G+ +K+VVSWN ++ A
Sbjct: 413 GKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYAR 472
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G++A+ +FE M+ +G+ PDEIT G+LSACSH+GL++ G YF M+ +G+ P
Sbjct: 473 HGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSK 532
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CM+DLLGR G L EA LI+ +P +P A WGALLGA + GN E+G++ + + ++
Sbjct: 533 HYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKM 592
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+SG+YVLLSN+Y+ S RW D K+R M D G++K S +E+ + F V D +
Sbjct: 593 EPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCS 652
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H IY+ +++L ++ GY
Sbjct: 653 HPEKERIYAYLEELDLKMREEGY 675
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 27/283 (9%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +++VS+N++IS +++ + A LF +M + N L + +C +GD
Sbjct: 75 MPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNC-RLGD---A 130
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ D + + + V NSL++ YA+ G + A ++F MP+KN +SWN ++ A +
Sbjct: 131 RRLFDLMPEKD----VVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHN 186
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA +FE S D I++ L+ + R+ F M IS
Sbjct: 187 GRIEEACLLFE----SKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAIS----- 237
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ M+ +GG L +A L + P + D W A++ G L+ K ++ E
Sbjct: 238 WNTMISGYAQGGGLSQARRLFDESPTR-DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN 296
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISS 284
Y + Y ++++ D +++ + M CR ISS
Sbjct: 297 EVS---YNAMIAGYVQTKKMDIARELFESM------PCRNISS 330
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 18/229 (7%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
+ WN IS H++ G A+ +F M + NA + L + L + D
Sbjct: 50 LKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSK----FNLARNLFDQ 105
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + ++ N ++ Y + L A +F MP+K+VVSWN ++ A +G EA
Sbjct: 106 MPERDLFS----WNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEA 161
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
E+F+ M + I++ GLL+A H+G +E F S D+ + C++
Sbjct: 162 REVFDNMPEK----NSISWNGLLAAYVHNGRIEEACLLFESKSDW-----DLISWNCLMG 212
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
R LG+A L K+P++ DA+ W ++ G L +++ +
Sbjct: 213 GFVRKKKLGDARWLFDKMPVR-DAISWNTMISGYAQGGGLSQARRLFDE 260
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 118/293 (40%), Gaps = 64/293 (21%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPV++A+SWN++IS + Q G ++A LF V T +++S G L
Sbjct: 230 MPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVF----TWTAMVSGYVQNGMLDEA 285
Query: 62 KKAHDYICDNNITV---------------------------SVTLCNSLMNMYAKCGALQ 94
K D + + N +++ N+++ Y + G +
Sbjct: 286 KTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIA 345
Query: 95 TAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
A F MPQ++ VSW II A G +EA+ MF +++ G + TF LS C+
Sbjct: 346 QARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405
Query: 155 HSGLVEMGRYYFG----------------LMSSTF-------------GI-SPDVAHYAC 184
+E+G+ G L++ F GI DV +
Sbjct: 406 DIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNT 465
Query: 185 MVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQIL 234
M+ R GF +A+++ + + +KPD + +L AC G L+ G +
Sbjct: 466 MLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYF 518
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 124/301 (41%), Gaps = 57/301 (18%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVS------------- 47
+MP K+ VSWNS++S + Q G EA E+F M + N L +
Sbjct: 136 LMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLL 195
Query: 48 --------ILSSCSHMGDLALGKKAHD--YICDNNITVSVTLCNSLMNMYAKCGALQTAM 97
++S MG KK D ++ D N++++ YA+ G L A
Sbjct: 196 FESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQAR 255
Query: 98 DIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG 157
+F P ++V +W ++ +G EA F++M +E+++ +++ +
Sbjct: 256 RLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTK 311
Query: 158 LVEMGRYYF-----------GLMSSTFGISPDVAH---------------YACMVDLLGR 191
+++ R F M + +G D+A +A ++ +
Sbjct: 312 KMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQ 371
Query: 192 GGFLGEAMSLIQKLPMKPDAV---VWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLY 248
G EA+++ ++ +++ +G L C LE+GKQI Q +++G Y +G +
Sbjct: 372 SGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMG-YGTGCF 430
Query: 249 V 249
V
Sbjct: 431 V 431
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 268 bits (684), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/323 (40%), Positives = 203/323 (62%), Gaps = 1/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNA-TLVSILSSCSHMGDLAL 60
M + SWNS+I+ + Q G EA LF M G + NA TL ++L +C+H G L +
Sbjct: 259 MEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQI 318
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK HD + + ++ + S+++MY KCG ++ A F + +KNV SW V++ +
Sbjct: 319 GKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGM 378
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG GKEA+++F +M G+ P+ ITF +L+ACSH+GL++ G ++F M F + P +
Sbjct: 379 HGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIE 438
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY+CMVDLLGR G+L EA LIQ++ +KPD +VWG+LLGAC+ N+E+G+ ++L +L
Sbjct: 439 HYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKL 498
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ G YVLLSN+Y+++ RWDD++++R +M + G+ K S +E G + F+V DK
Sbjct: 499 DPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKE 558
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H IY +D+L L+ VGY
Sbjct: 559 HPQHEKIYEYLDELNVKLQEVGY 581
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 55/287 (19%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
SWNSII+ + G +A+ F M + P+ +T + SCS + DL GK+ H
Sbjct: 53 SWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQA 112
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ + ++L++MY+KCG L A +F +P++NVVSW +I + +EA+
Sbjct: 113 FVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAV 172
Query: 129 EMF-----------EKMRASGLFPDEITFTGLLSACSH---------------------- 155
+F +++ G+ D + ++SAC+
Sbjct: 173 FLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGC 232
Query: 156 -------------SGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSL- 201
G + + R F M T DV + ++ + + G EA SL
Sbjct: 233 LAVGNTLMDAYAKCGEISVSRKVFDGMEET-----DVCSWNSLIAVYAQNGLSVEAFSLF 287
Query: 202 ---IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
+++ ++ +AV A+L AC G L++GK I Q++++ D+
Sbjct: 288 SDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDN 334
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 12/174 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-----------SGVMPDNATLVSILS 50
+P +N VSW S+IS +VQ + EA+ LF + GV D+ L ++S
Sbjct: 147 IPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVIS 206
Query: 51 SCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS 110
+C+ + ++ + H + + N+LM+ YAKCG + + +F GM + +V S
Sbjct: 207 ACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCS 266
Query: 111 WNVIIGALALHGSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGR 163
WN +I A +G EA +F M G + + +T + +L AC+HSG +++G+
Sbjct: 267 WNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGK 320
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 105 QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY 164
+ +V SWN II A G +A+ F MR L P+ TF + +CS + G+
Sbjct: 48 KTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQ 107
Query: 165 YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ FG D+ + ++D+ + G+L +A L ++P + + V W +++
Sbjct: 108 -IHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPER-NVVSWTSMI 159
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 268 bits (684), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/323 (40%), Positives = 203/323 (62%), Gaps = 1/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNA-TLVSILSSCSHMGDLAL 60
M + SWNS+I+ + Q G EA LF M G + NA TL ++L +C+H G L +
Sbjct: 259 MEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQI 318
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK HD + + ++ + S+++MY KCG ++ A F + +KNV SW V++ +
Sbjct: 319 GKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGM 378
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG GKEA+++F +M G+ P+ ITF +L+ACSH+GL++ G ++F M F + P +
Sbjct: 379 HGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIE 438
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY+CMVDLLGR G+L EA LIQ++ +KPD +VWG+LLGAC+ N+E+G+ ++L +L
Sbjct: 439 HYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKL 498
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ G YVLLSN+Y+++ RWDD++++R +M + G+ K S +E G + F+V DK
Sbjct: 499 DPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKE 558
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H IY +D+L L+ VGY
Sbjct: 559 HPQHEKIYEYLDELNVKLQEVGY 581
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 55/287 (19%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
SWNSII+ + G +A+ F M + P+ +T + SCS + DL GK+ H
Sbjct: 53 SWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQA 112
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ + ++L++MY+KCG L A +F +P++NVVSW +I + +EA+
Sbjct: 113 FVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAV 172
Query: 129 EMF-----------EKMRASGLFPDEITFTGLLSACSH---------------------- 155
+F +++ G+ D + ++SAC+
Sbjct: 173 FLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGC 232
Query: 156 -------------SGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSL- 201
G + + R F M T DV + ++ + + G EA SL
Sbjct: 233 LAVGNTLMDAYAKCGEISVSRKVFDGMEET-----DVCSWNSLIAVYAQNGLSVEAFSLF 287
Query: 202 ---IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
+++ ++ +AV A+L AC G L++GK I Q++++ D+
Sbjct: 288 SDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDN 334
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 12/174 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-----------SGVMPDNATLVSILS 50
+P +N VSW S+IS +VQ + EA+ LF + GV D+ L ++S
Sbjct: 147 IPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVIS 206
Query: 51 SCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS 110
+C+ + ++ + H + + N+LM+ YAKCG + + +F GM + +V S
Sbjct: 207 ACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCS 266
Query: 111 WNVIIGALALHGSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGR 163
WN +I A +G EA +F M G + + +T + +L AC+HSG +++G+
Sbjct: 267 WNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGK 320
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 105 QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY 164
+ +V SWN II A G +A+ F MR L P+ TF + +CS + G+
Sbjct: 48 KTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQ 107
Query: 165 YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ FG D+ + ++D+ + G+L +A L ++P + + V W +++
Sbjct: 108 -IHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPER-NVVSWTSMI 159
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/281 (45%), Positives = 189/281 (67%), Gaps = 8/281 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-----VMPDNATLVSILSSCSHMGDLAL 60
N VSWNSII CHV G++ EA++LF +M + PD+ATLV LS+C +G L
Sbjct: 175 NLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDF 234
Query: 61 GKKAHDYICD--NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
G+K H ++ D N+ S+++ N+L++MYAKCGA++ A + F M +KNVVSWNV+I
Sbjct: 235 GRKVHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGF 294
Query: 119 ALHGSGKEAIEMFEKMRASGL-FPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
A HG+G+EA+ +F +M + PDEITF +L ACSH GLV+ GR YF +M+ + I P
Sbjct: 295 ASHGNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKP 354
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ HY CMVDLLGR G EA LI+ +P++ +A++W LL AC+ +GN+E+G+++ K L
Sbjct: 355 TIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRTLLAACRNYGNVELGEKVRKHL 414
Query: 238 LELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
+EL S YVLL+NMY+ + +W++M K R+ M + ++K
Sbjct: 415 MELEPDHSSDYVLLANMYASTGQWNEMSKERRSMQERRVRK 455
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 128/288 (44%), Gaps = 16/288 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAE-AMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+P ++ WN++I H+ A+ F RM ++ PDN T IL + + + L
Sbjct: 70 IPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAH-RPDNFTFSFILKIIARLRFVNL 128
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+ H + + NSL++MY ++ A +F M Q N+VSWN II
Sbjct: 129 GKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVY 188
Query: 121 HGSGKEAIEMFEKM-----RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMS---ST 172
G EAI++F KM L PD T LSAC G ++ GR + ++
Sbjct: 189 CGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNS 248
Query: 173 FGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
FG S V + +VD+ + G + EA + K + V W ++ + GN E
Sbjct: 249 FGESISV--FNALVDMYAKCGAVEEAYETFSNMKRK-NVVSWNVMILGFASHGNGEEALA 305
Query: 233 ILKQLLE--LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMN-DSGIK 277
+ ++L + R D ++ + S D+ ++ +IMN D IK
Sbjct: 306 LFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIK 353
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 128/286 (44%), Positives = 189/286 (66%), Gaps = 1/286 (0%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLALGK 62
V+N VSWNS+++ HV+ + E + +F RM SG MP+ ATLVS+L++C+++G L LG
Sbjct: 279 VRNVVSWNSLLALHVRMKNYGECLRMFERMMESGEAMPNEATLVSVLTACANLGKLNLGL 338
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H YI N I + V L L+ MYAKCGA+ A D+F MP K++VSWN +I LHG
Sbjct: 339 WVHSYIKSNEIKLDVLLETCLLTMYAKCGAMDLASDVFVEMPVKSIVSWNSMIMGYGLHG 398
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+G +A+EMF +M +G P+E TF +LSACSH+G+V G +YF LM + I P V HY
Sbjct: 399 NGDKALEMFAEMEKAGQKPNEATFICVLSACSHAGMVMEGWWYFDLMRRVYKIEPKVEHY 458
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
CMVDLL R GF+ + LI+K+ +K + +WGALL C+T +LE+ + + K+L+EL
Sbjct: 459 GCMVDLLARAGFVKNSEELIEKVSVKGGSAMWGALLSGCRTHLDLELAENVAKRLVELEP 518
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEID 288
D Y+LLS++Y+ RWDD++++R M +G++K A S + ++
Sbjct: 519 QDISPYILLSDVYAAQGRWDDVERVRLAMKINGLQKEAASSLVHLE 564
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 121/246 (49%), Gaps = 20/246 (8%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V + VS+N++I +V+ G +A +LF M V N + +S +GDLA K+
Sbjct: 183 VLDLVSYNTMIDGYVKNGGIRDARKLFDEMYERDVFSWNCMIAGYVS----VGDLAAAKE 238
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFF---GMPQKNVVSWNVIIGALAL 120
+ + + + V N +++ + G + A++ F G+ +NVVSWN + LAL
Sbjct: 239 LFEAMPNKD----VVSWNCMIDGCVRVGNVSLALEFFNQMDGVVVRNVVSWNSL---LAL 291
Query: 121 HGSGK---EAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
H K E + MFE+M SG P+E T +L+AC++ G + +G + + S I
Sbjct: 292 HVRMKNYGECLRMFERMMESGEAMPNEATLVSVLTACANLGKLNLGLWVHSYIKSN-EIK 350
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
DV C++ + + G + A + ++P+K V W +++ GN + ++ +
Sbjct: 351 LDVLLETCLLTMYAKCGAMDLASDVFVEMPVK-SIVSWNSMIMGYGLHGNGDKALEMFAE 409
Query: 237 LLELGR 242
+ + G+
Sbjct: 410 MEKAGQ 415
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 12/234 (5%)
Query: 11 NSIISCHVQEGQHAEAMELFC-RMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
N+II +++ + A + RM V P++ T IL C G G+K H +
Sbjct: 88 NTIIRSYLRSSNPSAAFHFYYHRMIAKSVPPNHYTFPLILKLCVDHGCKLEGEKGHARVV 147
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + NSL+ MY+ G + A IF+ ++VS+N +I +G ++A +
Sbjct: 148 KFGFLSDLFVRNSLIRMYSVFGRIDDARLIFYESYVLDLVSYNTMIDGYVKNGGIRDARK 207
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLL 189
+F++M +F G +S G + + F M + DV + CM+D
Sbjct: 208 LFDEMYERDVFSWNCMIAGYVSV----GDLAAAKELFEAMPNK-----DVVSWNCMIDGC 258
Query: 190 GRGGFLGEAMSLIQKLP--MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
R G + A+ ++ + + V W +LL N ++ ++++E G
Sbjct: 259 VRVGNVSLALEFFNQMDGVVVRNVVSWNSLLALHVRMKNYGECLRMFERMMESG 312
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMG 56
MPVK+ VSWNS+I + G +A+E+F M +G P+ AT + +LS+CSH G
Sbjct: 379 MPVKSIVSWNSMIMGYGLHGNGDKALEMFAEMEKAGQKPNEATFICVLSACSHAG 433
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 197/316 (62%), Gaps = 1/316 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ SW ++IS + Q EA++LF RM + V PD ++++LS+C+ +G L LG+
Sbjct: 207 KDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWI 266
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H+YI + ++ V L NSL++MYAK G ++ A+++F M K +++W +I LALHG G
Sbjct: 267 HNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLG 326
Query: 125 KEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
KEA+ +F M + + P+E+TF +LSACSH GLVE+GR YF M S +GI P + HY
Sbjct: 327 KEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYG 386
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
CM+DLLGR G L EA ++ ++P + +A +WG+LL A G+ E+ ++ L+ L L
Sbjct: 387 CMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEALRHLTVLEPG 446
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
G Y LLSN Y+ RW++ + +RK+M D+G++K +S IE++ Y+F+ DK
Sbjct: 447 HCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVSFIEVNNIVYEFIAGDKLSIY 506
Query: 304 STSIYSMVDQLMDHLK 319
IY ++ L +K
Sbjct: 507 FVDIYDVLHSLDGQIK 522
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 201/320 (62%), Gaps = 1/320 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ VSWNSI++ Q G EA F M V+G PD+AT+VS+L +C + + +
Sbjct: 213 KSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVL 272
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I + ++T+ +L+N+Y+K G L + +F + + + V+W ++ A+HG G
Sbjct: 273 HGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCG 332
Query: 125 KEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
KEAIE FE++ R G+ PD +TFT LLSACSHSGLV+ G+Y+F +MS + + P + HY+
Sbjct: 333 KEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYS 392
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
CMVDLLGR G L +A LI+ +P +P++ VWGALLGAC+ N+++GK+ K L+ L
Sbjct: 393 CMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVHRNIDLGKEAAKNLIALDPS 452
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
D Y++LSNMYS + W+D K+R +M + + + + S IE ++F+VDD H
Sbjct: 453 DPRNYIMLSNMYSAAGLWNDASKVRTLMKNKVLTRNQGCSFIEHGNKIHRFVVDDYTHPD 512
Query: 304 STSIYSMVDQLMDHLKSVGY 323
S I+ ++++M ++ VG+
Sbjct: 513 SHRIHKKLEEVMKKIQDVGF 532
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 124/242 (51%), Gaps = 9/242 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNA-TLVSILSSCSHMGDLAL 60
MP K+ VSWNS++S + GQ E + +FC+M + N T +S++S+C
Sbjct: 106 MPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDE 165
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ--KNVVSWNVIIGAL 118
G H + V + N+L+NMY K G +++A +F MP+ K++VSWN I+
Sbjct: 166 GYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVC 225
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
A +G EA F+ MR +G FPD+ T LL AC + L M G++ T G+ +
Sbjct: 226 AQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVI-FTCGLDEN 284
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG----NLEMGKQIL 234
+ +++L + G L + + +++ KPD V W A+L G +E ++I+
Sbjct: 285 LTIVTTLLNLYSKLGRLNNSRKVFEEIS-KPDKVAWTAMLAGYAMHGCGKEAIEFFERIV 343
Query: 235 KQ 236
++
Sbjct: 344 RE 345
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRA-SGL 139
+ L++ Y K G + A +F MP+K+ VSWN ++ LA G E + +F KM++ S L
Sbjct: 84 DQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSEL 143
Query: 140 FPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAM 199
+E TF ++SAC + G YY + G+ +V +V++ G+ GF+ A
Sbjct: 144 KLNEFTFLSVISACVSEKACDEG-YYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAF 202
Query: 200 SLIQKLPMKPDAVV-WGALLGACKTFG 225
L ++P ++V W +++ C G
Sbjct: 203 RLFSEMPESEKSIVSWNSIVAVCAQNG 229
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 203/325 (62%), Gaps = 7/325 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N VSWN +I + + G + + +FC M + PD T+ S++ +C +G L+LG
Sbjct: 150 RNVVSWNVMIDSYAKVGDYDIVLIMFCEM-MKVYEPDCYTMQSVIRACGGLGSLSLGMWV 208
Query: 65 HDYI---CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H ++ CD N+ V + L++MY KCG+L+ A +F GM ++V SWN II A+H
Sbjct: 209 HAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVH 268
Query: 122 GSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G K A++ F +M + + P+ ITF G+LSAC+HSG+V+ G YF +M+ + + P +
Sbjct: 269 GKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLV 328
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC-KTFGNLEMGKQILKQLLE 239
HY C+VDL R G + EA++++ ++P+KPDAV+W +LL AC K ++E+ +++ KQ+ E
Sbjct: 329 HYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQIFE 388
Query: 240 L-GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
G G YVLLS +Y+ + RW+D+ +RK+MND G+ K S IEI+G ++F D
Sbjct: 389 SNGSVCGGAYVLLSKVYASASRWNDVGLLRKLMNDKGVSKKPGCSLIEINGAAHEFFAGD 448
Query: 299 KNHEVSTSIYSMVDQLMDHLKSVGY 323
NH S IY ++++ + L+SVGY
Sbjct: 449 TNHPQSKDIYKFMNEIQEKLESVGY 473
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 11/221 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSG----VMPDNATLVSILSSCSHMGDLALG 61
N+ +WN +I + + H + L + ++ + PD T +L +C+++ L G
Sbjct: 45 NSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKACAYLFSLFEG 104
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ-KNVVSWNVIIGALAL 120
K+ H ++ + +CNSL++ YA CG L+TA +F M + +NVVSWNV+I + A
Sbjct: 105 KQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAK 164
Query: 121 HGSGKEAIEMF-EKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY--FGLMSSTFGISP 177
G + MF E M+ PD T ++ AC G + +G + F L +
Sbjct: 165 VGDYDIVLIMFCEMMKVYE--PDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVC 222
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
DV C+VD+ + G L A + + + + D W +++
Sbjct: 223 DVLVNTCLVDMYCKCGSLEIAKQVFEGMSYR-DVSSWNSII 262
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
M ++ SWNSII G+ A++ F RM V ++P++ T V +LS+C+H G +
Sbjct: 250 MSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDE 309
Query: 61 GKKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGA- 117
G + + + N+ S+ L+++YA+ G +Q A+++ MP K + V W ++ A
Sbjct: 310 GLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRSLLDAC 369
Query: 118 LALHGSGKEAIEMFEKMRASG 138
H S + + EM +++ S
Sbjct: 370 YKQHASVELSEEMAKQIFESN 390
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 262 bits (669), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 201/322 (62%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+PVKN VSW +I V++ + EA+E F M ++GV+PD T+++I+S+C+++G L LG
Sbjct: 183 LPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLG 242
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H + +V + NSL++MYA+CG ++ A +F GM Q+N+VSWN II A++
Sbjct: 243 LWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVN 302
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +A+ F M+ GL P+ +++T L+ACSH+GL++ G F + SP + H
Sbjct: 303 GLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEH 362
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C+VDL R G L EA +I+K+PM P+ VV G+LL AC+T G++E+ ++++K +EL
Sbjct: 363 YGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELY 422
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
YVL SN+Y+ +WD K+R+ M + G++K A SSIEID ++F+ DK H
Sbjct: 423 PGGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHKFVSGDKYH 482
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
E + IYS ++ L L GY
Sbjct: 483 EENDYIYSALELLSFELHLYGY 504
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 167/390 (42%), Gaps = 87/390 (22%)
Query: 7 AVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSH---MGDLALGKK 63
VSW S IS H + +A F +M + V P++ TL+++LS+C+H + G
Sbjct: 52 TVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAA 111
Query: 64 AHDYICDNNITVS-VTLCNSLMNMYAKCGAL----------------------------- 93
H + + ++ V + +L++MYAKCG L
Sbjct: 112 LHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNG 171
Query: 94 --QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLS 151
A+ +F +P KNVVSW V+IG +EA+E F +M+ +G+ PD +T ++S
Sbjct: 172 DVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIIS 231
Query: 152 ACSHSGLVEMGRYYFGL-MSSTFGISPDVAHYACMVDLLGR------------------- 191
AC++ G + +G + L M F +V ++D+ R
Sbjct: 232 ACANLGALGLGLWVHRLVMKKEF--RDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNL 289
Query: 192 ------------GGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
G +A+S + + ++P+ V + + L AC G ++ G +I
Sbjct: 290 VSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFAD 349
Query: 237 LLELGRYDSGL--YVLLSNMYSESQR----WDDMKKIRKIMND----SGIKKCRAISSIE 286
+ R + Y L ++YS + R WD +KK+ + N+ S + CR +E
Sbjct: 350 IKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVE 409
Query: 287 IDGCCYQFMVD-----DKNHEVSTSIYSMV 311
+ ++ V+ D N+ + ++IY+ V
Sbjct: 410 LAEKVMKYQVELYPGGDSNYVLFSNIYAAV 439
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 204/320 (63%), Gaps = 1/320 (0%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V++AV WNS+++ + Q G E++ L M +GV P ATLV+++SS + + L G++
Sbjct: 211 VRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGRE 270
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + + + + +L++MYAKCG+++ A+ +F + +K VVSWN II A+HG
Sbjct: 271 IHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGL 330
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
A+++F+KMR PD ITF G+L+ACS L++ GR + LM +GI+P V HY
Sbjct: 331 AVGALDLFDKMRKEDR-PDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYT 389
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
CM+DLLG G L EA LI+ + +KPD+ VWGALL +CK GN+E+ + L++L+EL
Sbjct: 390 CMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPD 449
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
DSG YV+L+NMY++S +W+ ++K+R++M D IKK A S IE+ Y F+ D +H
Sbjct: 450 DSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSN 509
Query: 304 STSIYSMVDQLMDHLKSVGY 323
S +IY+ + +L + GY
Sbjct: 510 SDAIYAELKRLEGLMHEAGY 529
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 131/276 (47%), Gaps = 3/276 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P +N WN +I + G H A+ L+ +M G+ PDN TL +L +CS + + G
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEG 167
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H+Y+ + + + +L++MYAKCG + A +F + ++ V WN ++ A A +
Sbjct: 168 RSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQN 227
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E+I + +M A+G+ P E T ++S+ + + GR G G +
Sbjct: 228 GHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGF-GWRHGFQSNDKV 286
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D+ + G + A++L ++L K V W A++ G + ++ +
Sbjct: 287 KTALIDMYAKCGSVKVALALFERLREK-RVVSWNAIITGYAMHGLAVGALDLFDKMRKED 345
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIM-NDSGI 276
R D +V + S + D+ + + +M D GI
Sbjct: 346 RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGI 381
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
Query: 46 VSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ 105
S+L SC L GK+ H I + L L+++YA +L A ++F +P+
Sbjct: 51 TSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPK 110
Query: 106 KNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY 165
+N+ WNV+I A +G AI ++ KM GL PD T +L ACS + GR
Sbjct: 111 QNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSI 170
Query: 166 FGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
+ + G D+ A ++D+ + G + +A + K+ ++ DAV+W ++L A G
Sbjct: 171 HEYVIKS-GWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR-DAVLWNSMLAAYAQNG 228
Query: 226 NLEMGKQILKQLLELG 241
+ + + +++ G
Sbjct: 229 HPDESISLCREMAANG 244
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 261 bits (666), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 192/299 (64%), Gaps = 5/299 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSG---VMPDNATLVSILSSCSHMGDLAL 60
+N ++WNSII+ VQ G E++E+F M +SG V PD T+ S+LS+C+ +G +
Sbjct: 224 RNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDH 283
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK H Y+ N+I V + +L+NMY KCG +Q A++IF MP+K+ +W +I AL
Sbjct: 284 GKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFAL 343
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG GK+A + F +M +G+ P+ +TF GLLSACSHSGLVE GR F +M + I P +
Sbjct: 344 HGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIY 403
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYACMVD+L R EA+ LI+ +PMKPD VWGALLG C+ GN+++G+++ L++L
Sbjct: 404 HYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLIDL 463
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIK-KCRAISSIEIDGCCYQFMVDD 298
++ Y+ L ++Y ++ ++D K+IR M + GI+ K S IEI+G +F V +
Sbjct: 464 EPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIETKIPGCSIIEINGVVQEFSVGE 522
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 43/255 (16%)
Query: 25 EAMELFCRMCVSGVMPDNATLVSILSSCSHMG---------------------------- 56
+A+ L+ +M G++P+N T ++ CS +
Sbjct: 111 KALMLYKQMLNKGIVPNNLTFPFLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSL 170
Query: 57 -----DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSW 111
+ L K A + D V NS++ Y + G ++ A+++F M +N+++W
Sbjct: 171 ISLFMNFGLSKNARK-VFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITW 229
Query: 112 NVIIGALALHGSGKEAIEMFEKMR-ASG---LFPDEITFTGLLSACSHSGLVEMGRYYFG 167
N II L G KE++E+F +M+ SG + PD+IT +LSAC+ G ++ G++
Sbjct: 230 NSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHA 289
Query: 168 LMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNL 227
+ I DV +V++ G+ G + +A+ + +P K DA W A++ G
Sbjct: 290 YLRKN-DIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEK-DASAWTAMISVFALHG-- 345
Query: 228 EMGKQILKQLLELGR 242
GK+ LE+ +
Sbjct: 346 -FGKKAFDCFLEMEK 359
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+A +W ++IS G +A + F M +GV P++ T V +LS+CSH G + G
Sbjct: 326 MPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQG 385
Query: 62 KKAHDYICD-NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALA 119
+ D + +I + ++++ ++ A+ + MP K +V W ++G
Sbjct: 386 RCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQ 445
Query: 120 LHGSGK 125
+HG+ K
Sbjct: 446 MHGNIK 451
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 261 bits (666), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 196/319 (61%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN +SWN +I +++ +A++L+ +M V PD T S+L +C + L LG++
Sbjct: 251 KNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRI 310
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H+Y+ + ++ L NSL++MYA+CG L A +F M ++V SW +I A + G G
Sbjct: 311 HEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQG 370
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
A+ +F +M SG PD I F +LSACSHSGL++ GR YF M+ + I+P + HYAC
Sbjct: 371 CNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYAC 430
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VDLLGR G + EA ++I+++P++P+ VW LL +C+ F N+++G LL+L
Sbjct: 431 LVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQ 490
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
SG YVLLSN+Y+++ RW ++ +IR +M I+K IS++E++ + F+ D +H S
Sbjct: 491 SGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQS 550
Query: 305 TSIYSMVDQLMDHLKSVGY 323
IY + L+ +K +GY
Sbjct: 551 KEIYEELGVLVAKMKELGY 569
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 132/274 (48%), Gaps = 15/274 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N V +N +I +V ++ + + +F M G PDN T +L +CS +L G
Sbjct: 79 MSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYG 138
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H + + ++ + N L+ MY KCG L A +F M K+VVSWN ++ A +
Sbjct: 139 LLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHN 198
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS---GLVEMGRYYFGLMSSTFGISPD 178
+A+E+ +M G PD T L+ A +++ ++ + + + L IS +
Sbjct: 199 MRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNL-ISWN 257
Query: 179 VAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
V M+ + + +A+ L ++K ++PDA+ + ++L AC L +G++I
Sbjct: 258 V-----MIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRI-H 311
Query: 236 QLLELGRYDSGLYVL--LSNMYSESQRWDDMKKI 267
+ +E + L + L +MY+ DD K++
Sbjct: 312 EYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRV 345
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ SW S+IS + GQ A+ LF M SG PD+ V+ILS+CSH G L G
Sbjct: 349 MKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEG 408
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGA 117
+ + D+ IT + L+++ + G + A +I MP + N W ++ +
Sbjct: 409 RIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSS 466
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 6/192 (3%)
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
D+ KK H I N + +L LM YA CG +F M +NVV +NV+I
Sbjct: 33 DIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIR 92
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
+ + + + +F +M G PD T+ +L ACS S E RY + +
Sbjct: 93 SYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCS---ENLRYGLLIHGDVLKVG 149
Query: 177 PDVAHYA--CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
D + ++ + G+ G L EA + ++ K D V W +++ + +I
Sbjct: 150 LDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWK-DVVSWNSMVAGYAHNMRFDDALEIC 208
Query: 235 KQLLELGRYDSG 246
+++ + G+ G
Sbjct: 209 REMEDYGQKPDG 220
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/311 (39%), Positives = 191/311 (61%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP KN +SW S+I V+ G H EA+ L +M V+G+ PD TL LS+C+ +G L G
Sbjct: 203 MPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQG 262
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H YI N I + L +L++MY KCG ++ A+ +F + +K V +W IIG A+H
Sbjct: 263 KWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVH 322
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G EA++ F +M+ +G+ P TFT +L+ACSH+GLVE G+ F MS+ + + P + H
Sbjct: 323 GKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEH 382
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDLLGR GFL EA ++ +P+KP+A +WG+LL AC +LE+GK+I K L+EL
Sbjct: 383 YGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELD 442
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
G Y+ L+++++ + WD+ ++R + + G+ S+I ++G ++F + H
Sbjct: 443 PEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGVAHEFFAGAEPH 502
Query: 302 EVSTSIYSMVD 312
+Y M +
Sbjct: 503 PHVREMYDMSN 513
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 41/256 (16%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNA-TLVSILSSCSHMGDLALGKKA 64
N V WN++I + EA+ L+ +M + P NA T +L +CS + LA +
Sbjct: 75 NTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSI-PHNAYTFPFLLKACSALSALAETHQI 133
Query: 65 HDYICDNNITVSVTLCNSLMNMYA-------------------------------KCGAL 93
H I V NSL+ +YA KCG +
Sbjct: 134 HVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNV 193
Query: 94 QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
+ A IF MP+KNV+SW +I G KEA+ + ++M +G+ PD+IT + LSAC
Sbjct: 194 EMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSAC 253
Query: 154 SHSGLVEMGRY---YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPD 210
+ G +E G++ Y G + I P + ++D+ + G + +A+ + KL K
Sbjct: 254 AGLGALEQGKWIHTYIG--KNKIKIDPVLG--CALIDMYVKCGEMKKALLVFSKLE-KKC 308
Query: 211 AVVWGALLGACKTFGN 226
W A++G G
Sbjct: 309 VYTWTAIIGGFAVHGK 324
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 9/197 (4%)
Query: 46 VSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYA--KCGALQTAMDIFFGM 103
+S+L CS++G+L K+ H + + L+ YA + L A +F +
Sbjct: 15 MSLLERCSNIGEL---KQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRI 71
Query: 104 PQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH-SGLVEMG 162
N V WN +I A + +EA+ ++ +M + + TF LL ACS S L E
Sbjct: 72 SSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETH 131
Query: 163 RYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACK 222
+ + ++ FG +V ++ + G + A L LP + D V W ++
Sbjct: 132 QIHVQIIKRGFG--SEVYATNSLLRVYAISGSIKSAHVLFDLLPSR-DIVSWNTMIDGYI 188
Query: 223 TFGNLEMGKQILKQLLE 239
GN+EM +I + + E
Sbjct: 189 KCGNVEMAYKIFQAMPE 205
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 198/322 (61%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ +K V+WN++I+ +V G+ ++LF M +GV P+ +L S+L CS + L G
Sbjct: 222 LSLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLETGVKPNALSLTSVLLGCSDLSALQTG 281
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H +C + ++ T SL++MY+KCG L+ + D+F +P+K+VV+WN +I A H
Sbjct: 282 KQVHQLVCKSPLSRDTTAVTSLISMYSKCGDLKDSWDLFVQIPRKDVVTWNAMISGYAQH 341
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+G++A+ +F++M+ S + PD ITF +L AC+H+G+V++G YF M FGI H
Sbjct: 342 GAGEKALHLFDEMKKSEIKPDWITFVAVLLACNHAGMVDLGTKYFNSMVKEFGIKTRPEH 401
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDLLGR G L EA+ +++ +P KP ++G LLGAC+ ++ M + K LLEL
Sbjct: 402 YGCMVDLLGRAGRLSEAVDMVKSMPFKPHPAIFGTLLGACRIHKSMHMAEFAAKNLLELD 461
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ YV L+N+Y+ +W+ + ++RK M ++ + K S IEI+ ++F +D+ H
Sbjct: 462 PTSATGYVQLANVYAAQSKWEHVARVRKSMKENNVVKPPGYSWIEINNAVHEFRSNDRLH 521
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
SI+ +D+L +K GY
Sbjct: 522 PELVSIHEKLDKLETKMKLAGY 543
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 18/240 (7%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM----CVSGVMPDNATLVSILSSCSHMGD 57
MPV++ SWN+++S + Q EA L M CV+ + +VS +C GD
Sbjct: 129 MPVRDTASWNTMLSGYAQVRMMDEARRLLVAMPEKNCVTW-----SAMVSGYVAC---GD 180
Query: 58 LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
L + Y SV +++ Y K G + A +F+ + K +V+WN +I
Sbjct: 181 LDAAVECF-YAAPMK---SVITWTAMITGYMKFGRVGLAEMLFWKLSLKTLVTWNAMIAG 236
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
+G + +++F+ M +G+ P+ ++ T +L CS ++ G+ L+ + +S
Sbjct: 237 YVDNGRAENGLKLFKTMLETGVKPNALSLTSVLLGCSDLSALQTGKQVHQLVCKS-PLSR 295
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
D ++ + + G L ++ L ++P K D V W A++ G E + ++
Sbjct: 296 DTTAVTSLISMYSKCGDLKDSWDLFVQIPRK-DVVTWNAMISGYAQHGAGEKALHLFDEM 354
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA-L 120
K H Y D++ +V N L+ Y + G + +A+ +F M + +WN I+GA A
Sbjct: 28 KTHHAYDHDHS---NVIASNQLIASYVRSGDIDSALRVFHNMTVISTTTWNTILGAFAKK 84
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG+ + A ++F+K+ P+ +++ +L+ H + R +F M D A
Sbjct: 85 HGNFERARQLFDKIPE----PNTVSYNTMLACYLHHFGIHNARDFFDWMPVR-----DTA 135
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
+ M+ + + EA L+ +P K + V W A++ G+L+
Sbjct: 136 SWNTMLSGYAQVRMMDEARRLLVAMPEK-NCVTWSAMVSGYVACGDLD 182
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 201/327 (61%), Gaps = 1/327 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V++ S+I+ + Q G EA++L+ +M V+ + PD S+L++C+++ GK+
Sbjct: 451 EDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQL 510
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + NSL+NMYAKCG+++ A F +PQ+ +VSW+ +IG LA HG G
Sbjct: 511 HVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHG 570
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
KEA+ MF +M + P+ IT +L AC+H+GLV G+ YF M FGI P H+AC
Sbjct: 571 KEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPTQEHHAC 630
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
M+DLLGR G L EA+ L+ +P + D VWGALLGA + N+E+G++ ++L L
Sbjct: 631 MIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARIHKNVELGEKAAERLFTLEPDK 690
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
SG VLL+N+Y+ + W+++ +RK+M +S +KK +S IE+ + F+V D+NH S
Sbjct: 691 SGTLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMSWIEVKDRIHTFIVGDRNHSRS 750
Query: 305 TSIYSMVDQLMDHLKSVGY-PCKHSDV 330
I++ +D+L + L GY P +D+
Sbjct: 751 DEIFAKLDELSELLSKAGYSPIIETDI 777
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 6/219 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+ VSW+++IS +VQ G H EA+ F MC GV + T ++L +CS DL +GKK
Sbjct: 46 RTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKV 105
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + N+L+ MYAKCG + +F + + VVSWN +
Sbjct: 106 HAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFL 165
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE--MGRYYFGLMSSTFGISPDVAHY 182
E +++F++M + P+E + + +L+AC +GL + +GR GL+ G D
Sbjct: 166 AETVDLFKRMVEGKVRPNEYSLSIILNAC--AGLRDGGIGRTVHGLLMK-LGHGLDQFSA 222
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
+VD+ + G + +A+ + +++ + PD V W A++ C
Sbjct: 223 NALVDMYAKAGRIEDAVDVFREM-IHPDTVSWNAIIAGC 260
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 114/232 (49%), Gaps = 5/232 (2%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
VSWN++ SCHVQ AE ++LF RM V P+ +L IL++C+ + D +G+ H
Sbjct: 150 VSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGL 209
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + N+L++MYAK G ++ A+D+F M + VSWN II LH A
Sbjct: 210 LMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLA 269
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC--M 185
+ + +M+ SG P+ T + L AC+ GL ++GR + S + I D + +
Sbjct: 270 LILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGRQ---IHSCSVKIDSDSDLFVAVGL 326
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+DL + + +A +P K + AL+ G+ E + +L
Sbjct: 327 IDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFEL 378
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 120/240 (50%), Gaps = 7/240 (2%)
Query: 1 MMPVKN-AVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLA 59
+MP K+ ++ N++IS + Q G +A+ LF + + + TL ++L S + + +
Sbjct: 345 LMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIK 404
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
+ K+ H I + NSL++ Y KC + A IF +++V++ +I A +
Sbjct: 405 VCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYS 464
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG +EA++++ +M+ + + PD + LL+AC++ E G+ + + FG D+
Sbjct: 465 QHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGK-QLHVHAIKFGFMSDI 523
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN----LEMGKQILK 235
+V++ + G + +A ++P + V W A++G G+ L M Q+LK
Sbjct: 524 FASNSLVNMYAKCGSIEDADRAFSEIPQR-GIVSWSAMIGGLAQHGHGKEALIMFNQMLK 582
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 141/311 (45%), Gaps = 45/311 (14%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ VSWN+II+ V + A+ L M SG P+ TL S L +C+ MG LG++ H
Sbjct: 249 DTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGRQIH 308
Query: 66 D----YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN-VVSWNVIIGALAL 120
D+++ V+V L+++Y+KC + A + MP K+ +++ N +I +
Sbjct: 309 SCSVKIDSDSDLFVAV----GLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQ 364
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMGRYY-FGL 168
G ++AI +F ++ + ++ T + +L + + H+ ++ G Y F +
Sbjct: 365 CGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYV 424
Query: 169 MSS---TFG---------------ISPDVAHYACMVDLLGRGGFLGEAMSL---IQKLPM 207
++S T+G D+ Y M+ + G EA+ L +Q +
Sbjct: 425 INSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADI 484
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMK 265
KPD V +LL AC E GKQ+ ++ G + S ++ L NMY++ +D
Sbjct: 485 KPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFG-FMSDIFASNSLVNMYAKCGSIEDAD 543
Query: 266 KIRKIMNDSGI 276
+ + GI
Sbjct: 544 RAFSEIPQRGI 554
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + VSW+++I Q G EA+ +F +M V P++ TLVS+L +C+H G + G
Sbjct: 549 IPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEG 608
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
K+ + + + I + ++++ + G L A+++ +P + + W ++GA
Sbjct: 609 KQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAAR 668
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
+H + +E+ EK A LF E +G L
Sbjct: 669 IHKN----VELGEKA-AERLFTLEPDKSGTL 694
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 198/322 (61%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N ++W +IS Q G E ++LF +M G+ P + +++CS +G L G
Sbjct: 383 MPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNG 442
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + ++ N+L+ MY++CG +++A +F MP + VSWN +I ALA H
Sbjct: 443 QQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQH 502
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G +AIE+FE+M + PD ITF +L+AC+H+GL++ GR+YF M + +GI+P H
Sbjct: 503 GHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDH 562
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YA ++DLL R G +A S+I+ +P + A +W ALL C+ GN+E+G Q +LLEL
Sbjct: 563 YARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELI 622
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
G Y++LSNMY+ +WD++ ++R +M + G+KK S +E++ + F+VDD H
Sbjct: 623 PGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARH 682
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
++Y+ + QL++ +K +GY
Sbjct: 683 PEVQAVYTYLQQLVNEMKKLGY 704
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 130/274 (47%), Gaps = 49/274 (17%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSC----SHMGDLALGKK 63
V+WN++IS +V+ G + EA + F RM G+ D T S++S+C MG G++
Sbjct: 249 VAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQ 308
Query: 64 AHDYICDNNITVS----VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWN------- 112
H YI + S +++ N+L+ Y K + A +F MP ++++SWN
Sbjct: 309 VHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYV 368
Query: 113 ------------------------VIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
V+I LA +G G+E +++F +M++ GL P + F G
Sbjct: 369 NAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAG 428
Query: 149 LLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA--CMVDLLGRGGFLGEAMSLIQKLP 206
++ACS G ++ G+ + S + D A ++ + R G + A S+ +P
Sbjct: 429 AITACSVLGSLDNGQ---QIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMP 485
Query: 207 MKPDAVVWGALLGACKTFGN----LEMGKQILKQ 236
D+V W A++ A G+ +E+ +Q++K+
Sbjct: 486 YV-DSVSWNAMIAALAQHGHGVKAIELFEQMMKE 518
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 116/290 (40%), Gaps = 55/290 (18%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ +++ VS+N++I+ + A+ LF +M G +PD T S+LS+ S + D
Sbjct: 99 LTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERH 158
Query: 62 -KKAHDYICDNNITVSVTLCNSLMNMYAKCGA---------LQTAMDIFFGMPQKNV--- 108
+ H + + ++ N+L++ Y C + + +A +F P+ +
Sbjct: 159 CQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEP 218
Query: 109 ------------------------------VSWNVIIGALALHGSGKEAIEMFEKMRASG 138
V+WN +I G +EA + F +M + G
Sbjct: 219 SWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMG 278
Query: 139 LFPDEITFTGLLSAC----SHSGLVEMGRYYFGLMSSTFGISPDVAHYA-----CMVDLL 189
+ DE T+T L+SAC G+ GR G + T + P H+ ++
Sbjct: 279 IQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTV-VEPS-HHFVLSVNNALITFY 336
Query: 190 GRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ + EA + K+P++ D + W A+L +E I ++ E
Sbjct: 337 TKYDRMIEARRVFDKMPVR-DIISWNAVLSGYVNAQRIEEANSIFSEMPE 385
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 26 AMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMN 85
A + + SG P+ L +++ ++ +K D I +I TL ++
Sbjct: 24 ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTL----LS 79
Query: 86 MYAKCGALQTAMDIFFGMPQ--KNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDE 143
Y+ G ++ A +F P ++ VS+N +I A + G A+ +F +M+ G PD
Sbjct: 80 AYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDP 139
Query: 144 ITFTGLLSACS 154
TF+ +LSA S
Sbjct: 140 FTFSSVLSALS 150
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 197/324 (60%), Gaps = 2/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ V+WN++IS + G EAM LF +M GV PD+AT VS+ S+CS +G L LG
Sbjct: 177 MPQRSVVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELG 236
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+D I N I V+V L SL+NM+++CG ++ A +F + + NV++W +I +H
Sbjct: 237 CWVYDSIVSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMH 296
Query: 122 GSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G EA+E+F +M+ GL P+ +TF +LSAC+H+GL+ GR F M +G+ P +
Sbjct: 297 GYGVEAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMREEYGLVPGLE 356
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKL-PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
H+ CMVD+LG+ G L EA I++L P++ VW A+LGACK N ++G + + L+
Sbjct: 357 HHVCMVDMLGKAGLLTEAYQFIKELCPVEHVPAVWTAMLGACKMHKNYDLGVEAAQHLIS 416
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
L + YVLLSNMY+ + R D ++ +R +M GIKK SSI+++ Y F + DK
Sbjct: 417 LEPENPSNYVLLSNMYALAGRMDRVESVRNVMIQRGIKKQAGYSSIDVNNKTYLFRMGDK 476
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
H + IY +D L+ K GY
Sbjct: 477 AHPETNEIYQYLDGLIWRCKEAGY 500
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 117/264 (44%), Gaps = 34/264 (12%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
+NS+I Q G + + + RM S P + T S+ +C+H+ L +G H ++
Sbjct: 84 FNSLIKASSQHGFSLDTIFFYRRMLSSPHKPSSYTFTSVFKACAHLSALKIGTILHSHVF 143
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + + +++ YAK AL A +F MPQ++VV+WN +I +G EA+
Sbjct: 144 VSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQRSVVAWNTMISGYEHNGLANEAMT 203
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST---------------FG 174
+F KM G+ PD TF + SACS G +E+G + + + S F
Sbjct: 204 LFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYDSIVSNGIRVNVILGTSLINMFS 263
Query: 175 ISPDVAHYACMVDLLGRG---------------GFLGEAMSLIQKLPMK----PDAVVWG 215
DV + D + G G+ EAM L ++ + P+ V +
Sbjct: 264 RCGDVRRARAVFDSISEGNVIAWTAMISGYGMHGYGVEAMELFYEMKKERGLVPNTVTFV 323
Query: 216 ALLGACKTFGNLEMGKQILKQLLE 239
A+L AC G + G+Q+ + E
Sbjct: 324 AVLSACAHAGLIHEGRQVFASMRE 347
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 91 GALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
G++ +F + + +N +I A + HG + I + +M +S P TFT +
Sbjct: 64 GSIAYTRRLFLSVTDPDSFLFNSLIKASSQHGFSLDTIFFYRRMLSSPHKPSSYTFTSVF 123
Query: 151 SACSHSGLVEMGR------YYFGLMSSTFGISPDVAHYA--------------------- 183
AC+H +++G + G S++F + VA YA
Sbjct: 124 KACAHLSALKIGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQRSVV 183
Query: 184 ---CMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
M+ G EAM+L +K+ + PD+ + ++ AC G+LE+G + +
Sbjct: 184 AWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYDSI 243
Query: 238 LELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIMND 273
+ G R + L L NM+S R D+++ R + +
Sbjct: 244 VSNGIRVNVILGTSLINMFS---RCGDVRRARAVFDS 277
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 201/327 (61%), Gaps = 1/327 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V++ S+I+ + Q G EA++L+ +M V+ + PD S+L++C+++ GK+
Sbjct: 451 EDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQL 510
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + NSL+NMYAKCG+++ A F +PQ+ +VSW+ +IG LA HG G
Sbjct: 511 HVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHG 570
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
KEA+ MF +M + P+ IT +L AC+H+GLV G+ YF M FGI P H+AC
Sbjct: 571 KEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPTQEHHAC 630
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
M+DLLGR G L EA+ L+ +P + D VWGALLGA + N+E+G++ ++L L
Sbjct: 631 MIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARIHKNVELGEKAAERLFTLEPDK 690
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
SG VLL+N+Y+ + W+++ +RK+M +S +KK +S IE+ + F+V D+NH S
Sbjct: 691 SGTLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMSWIEVKDRIHTFIVGDRNHSRS 750
Query: 305 TSIYSMVDQLMDHLKSVGY-PCKHSDV 330
I++ +D+L + L GY P +D+
Sbjct: 751 DEIFAKLDELSELLSKAGYSPIIETDI 777
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 6/219 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+ VSW+++IS +VQ G H EA+ F MC GV + T ++L +CS DL +GKK
Sbjct: 46 RTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKV 105
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + N+L+ MYAKCG + +F + + VVSWN +
Sbjct: 106 HAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFL 165
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE--MGRYYFGLMSSTFGISPDVAHY 182
E +++F++M + P+E + + +L+AC +GL + +GR GL+ G D
Sbjct: 166 AETVDLFKRMVEGKVRPNEYSLSIILNAC--AGLRDGGIGRTVHGLLMK-LGHGLDQFSA 222
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
+VD+ + G + +A+ + +++ + PD V W A++ C
Sbjct: 223 NALVDMYAKAGRIEDAVDVFREM-IHPDTVSWNAIIAGC 260
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 114/232 (49%), Gaps = 5/232 (2%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
VSWN++ SCHVQ AE ++LF RM V P+ +L IL++C+ + D +G+ H
Sbjct: 150 VSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGL 209
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + N+L++MYAK G ++ A+D+F M + VSWN II LH A
Sbjct: 210 LMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLA 269
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC--M 185
+ + +M+ SG P+ T + L AC+ GL ++GR + S + I D + +
Sbjct: 270 LILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGRQ---IHSCSVKIDSDSDLFVAVGL 326
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+DL + + +A +P K + AL+ G+ E + +L
Sbjct: 327 IDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFEL 378
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 1 MMPVKN-AVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLA 59
+MP K+ ++ N++IS + Q G +A+ LF + + + TL ++L S + + +
Sbjct: 345 LMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIK 404
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
+ K+ H I + NSL++ Y KC + A IF +++V++ +I A +
Sbjct: 405 VCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYS 464
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG +EA++++ +M+ + + PD + LL+AC++ E G+ + + FG D+
Sbjct: 465 QHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGK-QLHVHAIKFGFMSDI 523
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+V++ + G + +A ++P + V W A++G G+ + + Q+L+
Sbjct: 524 FASNSLVNMYAKCGSIEDADRAFSEIPQR-GIVSWSAMIGGLAQHGHGKEALIMFNQMLK 582
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 137/307 (44%), Gaps = 37/307 (12%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ VSWN+II+ V + A+ L M SG P+ TL S L +C+ MG LG++ H
Sbjct: 249 DTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGRQIH 308
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN-VVSWNVIIGALALHGSG 124
+ + + L+++Y+KC + A + MP K+ +++ N +I + G
Sbjct: 309 SCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDD 368
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMGRYY-FGLMSS- 171
++AI +F ++ + ++ T + +L + + H+ ++ G Y F +++S
Sbjct: 369 EQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSL 428
Query: 172 --TFG---------------ISPDVAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDA 211
T+G D+ Y M+ + G EA+ L +Q +KPD
Sbjct: 429 LDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDP 488
Query: 212 VVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMKKIRK 269
V +LL AC E GKQ+ ++ G + S ++ L NMY++ +D +
Sbjct: 489 FVCSSLLNACANLSAYEQGKQLHVHAIKFG-FMSDIFASNSLVNMYAKCGSIEDADRAFS 547
Query: 270 IMNDSGI 276
+ GI
Sbjct: 548 EIPQRGI 554
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + VSW+++I Q G EA+ +F +M V P++ TLVS+L +C+H G + G
Sbjct: 549 IPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEG 608
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
K+ + + + I + ++++ + G L A+++ +P + + W ++GA
Sbjct: 609 KQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAAR 668
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
+H + +E+ EK A LF E +G L
Sbjct: 669 IHKN----VELGEKA-AERLFTLEPDKSGTL 694
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 185/287 (64%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ +SW S+IS + Q GQ +A+ LF M V+ V PD T+ S+LS+C+H+G L +G
Sbjct: 269 MPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVG 328
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H+YI ++ + + N+L++MY KCGA++ + +F M +++ VSW +I LA++
Sbjct: 329 EAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVN 388
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
GS A+ +F M G+ P TF G+L AC+H+G+V+ G YF M +G++P++ H
Sbjct: 389 GSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKH 448
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C+VDLL R G LG A I+++PM PD VVW LL A + GNL + + K+LLE
Sbjct: 449 YGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATKKLLETD 508
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEID 288
+SG Y+L SN Y+ S RW+D+ K+R++M +S + K A SS+EI+
Sbjct: 509 PSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVEIN 555
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 136/280 (48%), Gaps = 34/280 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWNS+I + + +++E + +F M ++ V D T+V ++ +C+ +G+ +
Sbjct: 137 MSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVV 196
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNV-------- 113
+YI +N + V V L N+L++MY + + A +F M +N+VSWN
Sbjct: 197 DAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKA 256
Query: 114 -----------------------IIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
+I + + G +A+ +F++M + + PDEIT +L
Sbjct: 257 GNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVL 316
Query: 151 SACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPD 210
SAC+H G +++G + + ++ D+ ++D+ + G + + +S+ +++ K D
Sbjct: 317 SACAHIGALDVGEAVHEYIRK-YDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMG-KRD 374
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYV 249
+V W +++ G+ + + +L G R G +V
Sbjct: 375 SVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFV 414
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 112/296 (37%), Gaps = 65/296 (21%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P WN +I Q Q EA+ + M + +N T +L +C+ + +++
Sbjct: 37 IPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACARISNVSC- 95
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H + + + N+L++ YA L A +F M ++++VSWN +I
Sbjct: 96 TTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRC 155
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG------------------------ 157
E + +FE+MR + + D +T ++ AC+ G
Sbjct: 156 RRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLG 215
Query: 158 -----------LVEMGRYYFGLMSSTFGIS--------------------------PDVA 180
+V++ R F M +S DV
Sbjct: 216 NTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVI 275
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQI 233
+ M+ + G G+A+ L Q++ +KPD + ++L AC G L++G+ +
Sbjct: 276 SWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAV 331
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 258 bits (658), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 197/322 (61%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP NAV+W+SI++ +VQ G H A+ LF + G D + S + +C+ + L G
Sbjct: 218 MPETNAVTWSSILAGYVQNGLHEAALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIEG 277
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H C + ++ + +SL++MYAKCG ++ A +F G +++V WN +I H
Sbjct: 278 KQVHAISCKSGFGSNIYVTSSLIDMYAKCGCIREAYIVFQGEELRSIVLWNAMISGFGRH 337
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
EA+ +FEKM+ GLFPD++T+ +L+ACSH GL E G YF LM + P V H
Sbjct: 338 ACALEAMILFEKMQQRGLFPDDVTYVSVLNACSHMGLHEQGHKYFDLMVREHNLRPSVLH 397
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+CMVD+LGR G + +A LI+++P + +WG+LL +C+ GN+E + K L E+
Sbjct: 398 YSCMVDILGRAGLVHKAYDLIERMPFSATSSIWGSLLASCRIHGNIEFAEIAAKHLFEME 457
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
++G +VLL+N+Y+ +++W+++ K RK++ DS +KK R S IEI + F V ++NH
Sbjct: 458 PDNAGNHVLLANIYAANKKWEEVAKTRKLLRDSELKKDRGTSWIEIKNKIHSFTVGERNH 517
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+ IY+ +D L++ L+ + Y
Sbjct: 518 PLINEIYAKLDSLVEELEKLNY 539
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 107/218 (49%), Gaps = 2/218 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPVK+ VSWN++I + + EA+ LF +M G + + T+ S+L C+ +
Sbjct: 117 MPVKSVVSWNTMIGALTRIAKEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILEC 176
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + ++ + + +L+++YAKC +++ A +F MP+ N V+W+ I+ +
Sbjct: 177 MQLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQN 236
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G + A+ +F + G D + + AC+ + G+ + S G ++
Sbjct: 237 GLHEAALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIEGKQVHAI-SCKSGFGSNIYV 295
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
+ ++D+ + G + EA + Q ++ V+W A++
Sbjct: 296 TSSLIDMYAKCGCIREAYIVFQGEELR-SIVLWNAMIS 332
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 43 ATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG 102
+ L +IL C+ G+ H + N L+NMY+KC + A +F
Sbjct: 57 SNLQNILQLCAKSRSSIAGRACHAQFILVGFETDILTSNMLINMYSKCSLVHDARIVFDE 116
Query: 103 MPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS-GLVE- 160
MP K+VVSWN +IGAL +EA+ +F +M G +E T + +L C+ ++E
Sbjct: 117 MPVKSVVSWNTMIGALTRIAKEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILEC 176
Query: 161 MGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
M + F + S + + ++ + + + +A + + +P + +AV W ++L
Sbjct: 177 MQLHAFSIKVS---VDSNCFVGTALLHVYAKCSSIKDASKMFESMP-ETNAVTWSSILA 231
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 258 bits (658), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 125/322 (38%), Positives = 203/322 (63%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN V WN++I+ Q +A+++F +M S + PD +++ L +CS + L LG
Sbjct: 563 MEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLG 622
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + +++T + SL++MYAKCG ++ + +IF + K V+WNV+I +H
Sbjct: 623 KELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIH 682
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G++AIE+F+ M+ +G PD +TF LL+AC+H+GLV G Y G M S FGI P + H
Sbjct: 683 GHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEH 742
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YAC+VD+LGR G L EA+ L+ +LP KPD+ +W +LL +C+ + +L++G+++ +LLELG
Sbjct: 743 YACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELG 802
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ YVL+SN Y+ +WD+++K+R+ M + G++K S IEI G +F+V D++
Sbjct: 803 PDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESL 862
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
S I +L + +GY
Sbjct: 863 LQSMKIQQTWIELEKKINKIGY 884
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 133/255 (52%), Gaps = 11/255 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K SWN++I HVQ G +A++L+ M SG+ PD T+ S+LS+C+ + L+ G
Sbjct: 462 MESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCG 521
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + N + +C SL+++Y +CG + A F M +KN+V WN +I + +
Sbjct: 522 KEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQN 581
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+A++MF +M +S ++PDEI+ G L ACS + +G+ F + +
Sbjct: 582 EFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKEL-----HCFAVKSHLTE 636
Query: 182 YA----CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++ ++D+ + G + ++ ++ ++ +K + V W L+ G+ ++ K +
Sbjct: 637 HSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGE-VTWNVLITGYGIHGHGRKAIELFKSM 695
Query: 238 LELG-RYDSGLYVLL 251
G R DS ++ L
Sbjct: 696 QNAGFRPDSVTFIAL 710
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 125/236 (52%), Gaps = 6/236 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDNATLVSILSSCSHMGDLALGKK 63
KN WN+++S +++ +A+ +F M ++ +PDN TL ++ +C + D+ LG+
Sbjct: 158 KNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEA 217
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + + V + N+L+ MY K G +++A+ +F MPQ+N+VSWN ++ A +G
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277
Query: 124 GKEAIEMFEKMRA--SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+E+ +F+ + GL PD T ++ C+ G V +G + GL + G+ ++
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGL-ALKLGLCGELKV 336
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ ++D+ + G+L EA L + + + W +++G + ++L+++
Sbjct: 337 NSSLLDMYSKCGYLCEARVLFD--TNEKNVISWNSMIGGYSKDRDFRGAFELLRKM 390
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 35/264 (13%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLALGKK 63
KN +SWNS+I + ++ A EL +M + V + TL+++L C K+
Sbjct: 362 KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKE 421
Query: 64 AHDYICDNNITVSVTL-CNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H Y + S L N+ + YAKCG+L A +F GM K V SWN +IG +G
Sbjct: 422 IHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNG 481
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG--------------- 167
++A++++ MR SGL PD T LLSAC+ + G+ G
Sbjct: 482 FPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICI 541
Query: 168 ------------LMSSTFGISPDVAHYAC---MVDLLGRGGFLGEAMSLIQKL---PMKP 209
L++ F + + + C M++ + F +A+ + ++ + P
Sbjct: 542 SLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWP 601
Query: 210 DAVVWGALLGACKTFGNLEMGKQI 233
D + LGAC L +GK++
Sbjct: 602 DEISIIGALGACSQVSALRLGKEL 625
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 39/294 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV--SGVMPDNATLVSILSSCSHMGDLA 59
MP +N VSWNS++ ++ G E+ LF + G+MPD AT+V+++ C+ G++
Sbjct: 257 MPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVR 316
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
LG H + + + +SL++MY+KCG L A + F +KNV+SWN +IG +
Sbjct: 317 LGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEAR-VLFDTNEKNVISWNSMIGGYS 375
Query: 120 LHGSGKEAIEMFEKMR-ASGLFPDEITFTGLLSACSHS----GLVEMGRYYFG---LMSS 171
+ A E+ KM+ + +E+T +L C L E+ Y + S
Sbjct: 376 KDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSD 435
Query: 172 TFGISPDVAHYA------------CMVD---------LLG---RGGFLGEAMS---LIQK 204
+ VA YA C ++ L+G + GF +A+ L++
Sbjct: 436 ELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRG 495
Query: 205 LPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSE 257
++PD +LL AC +L GK+I +L G D + + L ++Y +
Sbjct: 496 SGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQ 549
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 4/193 (2%)
Query: 48 ILSSCSHMGDLALGKKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK 106
+L C ++ +G+K H++I + + V L L+ MY+ C + + +F +K
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 107 NVVSWNVIIGALALHGSGKEAIEMF-EKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY 165
N+ WN ++ + ++A+ +F E + + PD T ++ AC V +G
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 166 FGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
G T +S DV ++ + G+ GF+ A+ + K+P + + V W +++ AC G
Sbjct: 219 HGFALKTKVLS-DVFVGNALIAMYGKFGFVESAVKVFDKMPQR-NLVSWNSVMYACLENG 276
Query: 226 NLEMGKQILKQLL 238
E + K LL
Sbjct: 277 VFEESYGLFKGLL 289
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/322 (38%), Positives = 199/322 (61%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MMP +N V+WNS++S +VQ G E ++L+ M +GV PD T + + +C+ + + L
Sbjct: 470 MMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKL 529
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + + ++++V++ NS++ MY++CG ++ A + F + K+++SWN ++ A A
Sbjct: 530 GMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQ 589
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G G + I+ FE M + P+ I++ +LS CSH GLV G++YF M+ FGISP
Sbjct: 590 NGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNE 649
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
H++CMVDLLGR G L +A LI+ +P KP+A VW ALLG+C+ +L + + K+L+EL
Sbjct: 650 HFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMEL 709
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
S YVLLSNMYSES D++ +RK+M GI+ R S IE+D + F VD+ +
Sbjct: 710 DVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETS 769
Query: 301 HEVSTSIYSMVDQLMDHLKSVG 322
H +Y ++++M ++ G
Sbjct: 770 HPQIKEVYLKLEEMMKMIEDTG 791
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 126/259 (48%), Gaps = 6/259 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSWN++IS Q G + + +F MC G P+ T S+LS+C+ DL G
Sbjct: 238 MPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWG 297
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H I ++ + N L++MYAKCG L A +F + + + +SWN +I +
Sbjct: 298 AHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHF 357
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL-MSSTFGISPDVA 180
G G++A+ +F +MR S + DE +L CS G G + S G S V
Sbjct: 358 GLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVG 417
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE- 239
+ ++ + + G +A + + +P++ + + W A++ A G++ + + E
Sbjct: 418 N--AIITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITAFSRSGDIGKARGYFDMMPER 474
Query: 240 -LGRYDSGLYVLLSNMYSE 257
+ ++S L + N +SE
Sbjct: 475 NIVTWNSMLSTYVQNGFSE 493
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 33/244 (13%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
+SWNS+I+ V G +A+ LF +M S V+ D L +IL CS + G+ H Y
Sbjct: 345 ISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGY 404
Query: 68 ICDNNITVSVTLCNSLMNMYAKCG-------------------------ALQTAMDI--- 99
+ + S + N+++ MYAKCG A + DI
Sbjct: 405 TIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKA 464
Query: 100 ---FFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS 156
F MP++N+V+WN ++ +G +E ++++ MR++G+ PD ITFT + AC+
Sbjct: 465 RGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADL 524
Query: 157 GLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGA 216
+V++G ++ FG+S +V+ +V + R G + EA + + K D + W A
Sbjct: 525 AIVKLGMQVV-THATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDK-DLISWNA 582
Query: 217 LLGA 220
+L A
Sbjct: 583 MLAA 586
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 39/261 (14%)
Query: 2 MPV--KNAVSWNSIISCHVQEGQHAEAMELFCRMCVS----GVMPDNATLVSILSSCSHM 55
MPV K++VSW ++IS + Q G H+ + E F M G D + S++ +C +
Sbjct: 100 MPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSL 159
Query: 56 GDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG------------- 102
GD L + H + + + NS++ MY KCG + A +FF
Sbjct: 160 GDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMI 219
Query: 103 ------------------MPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEI 144
MP+++ VSWN +I + HG G + + MF +M G P+ +
Sbjct: 220 YGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFM 279
Query: 145 TFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
T+ +LSAC+ + ++ G + + S D+ ++D+ + G L A + +
Sbjct: 280 TYGSVLSACASTSDLKWGAHLHARILR-MEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKS 338
Query: 205 LPMKPDAVVWGALLGACKTFG 225
L + D + W +L+ FG
Sbjct: 339 L-REHDHISWNSLITGVVHFG 358
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/318 (39%), Positives = 194/318 (61%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ VSW S+I+C V G EA+ELF + + + PD TLVS+L + + + L GK+
Sbjct: 516 KDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEI 575
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ + + NSL++MYA+CG ++ A +IF + Q++++ W +I A +HG G
Sbjct: 576 HGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCG 635
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
K+AI++F KM + PD ITF LL ACSHSGLV G+ +F +M + + + P HYAC
Sbjct: 636 KDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYAC 695
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VDLL R L EA ++ +P++P A VW ALLGAC+ N ++G+ K+LL+L +
Sbjct: 696 LVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTEN 755
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
SG YVL+SN ++ RW+D++++R IM + +KK S IE++ + FM DK+H
Sbjct: 756 SGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQC 815
Query: 305 TSIYSMVDQLMDHLKSVG 322
+IY + Q LK G
Sbjct: 816 NNIYLKLAQFTKLLKEKG 833
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 33/309 (10%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M + VSWNSIIS HV EG+ EA+ LF RM GV + T VS L +C + +
Sbjct: 210 LMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKI 269
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+ H I +N V + N+L+ MYA CG ++ A +F M K+ VSWN ++ +
Sbjct: 270 GRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQ 329
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG--LVEMGRYYFGL---------- 168
+ +AI F+ M+ SG PD+++ +++A S L M + + +
Sbjct: 330 NDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHI 389
Query: 169 ----------------MSSTFGISP--DVAHYACMVDLLGRGGFLGEAMSLIQKL---PM 207
M S F P D+ + ++ + +A++L++K+ M
Sbjct: 390 GNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKM 449
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKI 267
D ++ G++L AC + ++ K+I +L+ G D + + N+Y E D + +
Sbjct: 450 DVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHV 509
Query: 268 RKIMNDSGI 276
+ +N I
Sbjct: 510 FESINSKDI 518
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 105/221 (47%), Gaps = 8/221 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M + +WN++I V G++ EA+EL+ M V GV D T +L +C + LG
Sbjct: 108 MSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLG 167
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG--MPQKNVVSWNVIIGALA 119
+ H V +CN+L+ MYAKCG L A +F M + + VSWN II A
Sbjct: 168 CEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHV 227
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR--YYFGLMSSTFGISP 177
G EA+ +F +M+ G+ + TF L AC +++GR + L S+ F
Sbjct: 228 GEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHF---T 284
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
DV ++ + G + +A + + + K D V W LL
Sbjct: 285 DVYVSNALIAMYANCGQMEDAERVFKSMLFK-DCVSWNTLL 324
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 46/309 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ VSWN+++S VQ +++A+ F M SG PD ++++++++ +L G
Sbjct: 312 MLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAG 371
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y + I ++ + NSL++MY KC ++ F MP+K+++SW II A +
Sbjct: 372 MEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQN 431
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACS--------------------------- 154
+A+ + K++ + D + +L ACS
Sbjct: 432 ECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQN 491
Query: 155 -------HSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKL-- 205
LV+ R+ F ++S D+ + M+ G EA+ L L
Sbjct: 492 AIVNVYGELALVDYARHVFESINSK-----DIVSWTSMITCCVHNGLAIEALELFNSLIE 546
Query: 206 -PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV-LLSNMYSESQRWDD 263
++PD + ++L A +L+ GK+I L+ G + GL L +MY+ R
Sbjct: 547 TNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYA---RCGT 603
Query: 264 MKKIRKIMN 272
M+ R I N
Sbjct: 604 MENARNIFN 612
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 112/220 (50%), Gaps = 5/220 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ +SW +II+ + Q H +A+ L ++ + + D + SIL +CS + L
Sbjct: 413 MPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLI 472
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H Y+ + + + N+++N+Y + + A +F + K++VSW +I +
Sbjct: 473 KEIHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHN 531
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDVA 180
G EA+E+F + + + PD IT +L A + ++ G+ G L+ F + +A
Sbjct: 532 GLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIA 591
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+ +VD+ R G + A ++ + + D ++W +++ A
Sbjct: 592 N--SLVDMYARCGTMENARNIFNYVKQR-DLILWTSMINA 628
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 4/218 (1%)
Query: 39 MPDNATLVSILSSCSHMGDLALGKKAH-DYICDNNITVSVTLCNSLMNMYAKCGALQTAM 97
P L C+ L G++ H ++ N SV L ++MY KCG+ A+
Sbjct: 43 FPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAV 102
Query: 98 DIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG 157
+F M ++ + +WN +IGA G EAIE++++MR G+ D TF +L AC
Sbjct: 103 KVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFK 162
Query: 158 LVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK-LPMKPDAVVWGA 216
+G G+ + G V ++ + + G LG A L L K D V W +
Sbjct: 163 ERRLGCEIHGV-AVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNS 221
Query: 217 LLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNM 254
++ A G + +++ E+G +S Y +S +
Sbjct: 222 IISAHVGEGESLEALSLFRRMQEVG-VESNTYTFVSAL 258
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 254 bits (650), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 130/321 (40%), Positives = 195/321 (60%), Gaps = 3/321 (0%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLALGK 62
VK+ ++WN++IS + Q G +E++ M V GV PD TL+ +L SC+++G +G+
Sbjct: 224 VKDLITWNAMISGYAQNGHARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLGAQGIGR 283
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ--KNVVSWNVIIGALAL 120
+ I + L N+L+NMYA+CG L A ++F M + K+VVSW IIG +
Sbjct: 284 EVEKEIDRFGFRSNSFLMNALINMYARCGNLVRAREVFDCMDERSKSVVSWTAIIGGYGI 343
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G+ A+E+F+ M SG+ PD F +LSACSH+GL E G YF M +G+ P
Sbjct: 344 HGEGETAVELFDVMVRSGVKPDRTVFVSVLSACSHAGLTEKGLEYFDEMERKYGLQPGPE 403
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY+C+VDLLGR G L EAM LI + +KPD VWGALLGACK N+E+ + + ++EL
Sbjct: 404 HYSCLVDLLGRSGRLKEAMDLIDLMKVKPDGPVWGALLGACKIHRNVELAEVAFQHVIEL 463
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ G YVLLSN+YS+++ + + K+R +M D ++K S +E G + F D +
Sbjct: 464 EPTNIGYYVLLSNLYSDTKNLEGVLKVRVMMRDRNLRKDPGCSYVEYKGKMHLFYSGDTS 523
Query: 301 HEVSTSIYSMVDQLMDHLKSV 321
H S IY M+++L + +K +
Sbjct: 524 HPQSKEIYRMLNELENLVKDI 544
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 37/272 (13%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDNATLVSILSSCSHMGDLALG 61
PV +S+N++IS + EA++LF RM C + ++ T++ ++S L LG
Sbjct: 121 PVNLTISYNAMISGYTNNMMIVEAIKLFRRMLCENRFFVNSVTMLGLVSGILVPEKLRLG 180
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H +++ NS + MY KCG ++ +F + K++++WN +I A +
Sbjct: 181 FCLHGCCFKFGFENDLSVGNSFLTMYVKCGEVEYGRKVFDEILVKDLITWNAMISGYAQN 240
Query: 122 GSGKEAIEMFEKMR-ASGLFPDEITFTGLLSACSHSGLVEMGRY------YFGLMSSTFG 174
G + +E++ +MR G+ PD +T G+L +C++ G +GR FG S++F
Sbjct: 241 GHARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLGAQGIGREVEKEIDRFGFRSNSFL 300
Query: 175 ISPDVAHYA-------------CMVD----------LLGRGGFLGEAMSLIQ------KL 205
++ + YA CM + ++G G GE + ++ +
Sbjct: 301 MNALINMYARCGNLVRAREVFDCMDERSKSVVSWTAIIGGYGIHGEGETAVELFDVMVRS 360
Query: 206 PMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+KPD V+ ++L AC G E G + ++
Sbjct: 361 GVKPDRTVFVSVLSACSHAGLTEKGLEYFDEM 392
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 121/307 (39%), Gaps = 49/307 (15%)
Query: 7 AVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHD 66
+WN + ++ + EA+ ++ M S P+ T +L SC+ + G + H
Sbjct: 24 TTAWNCYLRELSKQRKFMEALTVYRHMLRSSFFPNTFTFPVLLKSCALLSLPFTGSQLHS 83
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
+I +SL+NMY+K A +F P +S+N +I + E
Sbjct: 84 HILKTGSQPDPYTHSSLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNMMIVE 143
Query: 127 AIEMFEKMRASG-LFPDEITFTGLLSA-----------CSHS------------------ 156
AI++F +M F + +T GL+S C H
Sbjct: 144 AIKLFRRMLCENRFFVNSVTMLGLVSGILVPEKLRLGFCLHGCCFKFGFENDLSVGNSFL 203
Query: 157 ------GLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP---- 206
G VE GR F + + D+ + M+ + G + + +++
Sbjct: 204 TMYVKCGEVEYGRKVFDEI-----LVKDLITWNAMISGYAQNGHARRVLEIYREMRKVGG 258
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMK 265
+ PD V +L +C G +G+++ K++ G R +S L L NMY+ R ++
Sbjct: 259 VNPDPVTLLGVLCSCANLGAQGIGREVEKEIDRFGFRSNSFLMNALINMYA---RCGNLV 315
Query: 266 KIRKIMN 272
+ R++ +
Sbjct: 316 RAREVFD 322
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 202/326 (61%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSW+S+I +VQ G+ + +E F M G+ P+ + LV++LS+ + +G L G
Sbjct: 206 MPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMREKGIRPNESILVTMLSASAQLGLLGWG 265
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H I +SV + L++MYAKCG ++ + D+F GM ++++ +W V+I LA H
Sbjct: 266 RFVHSTIESLRFRISVAIGTGLVDMYAKCGCIEESRDLFDGMMERDIWTWTVMICGLASH 325
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
KEA+ +F + G P + F G+L+ACS +GLV GRYYF LM +GISP++ H
Sbjct: 326 DRAKEALVLFREFIREGFRPVNVIFVGVLNACSRAGLVSEGRYYFKLMVDGYGISPEMEH 385
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDL R G + EA+ LI+ + ++PD V+W LL AC+ G +EMG++I +L+++
Sbjct: 386 YGCMVDLFARAGLIDEAVRLIETMTVEPDPVMWATLLDACEIHGFVEMGEKIGNKLIKMD 445
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
G YV L+ +Y++S++WDD+ ++R++M + K S IE++ ++F+ D++H
Sbjct: 446 PTHDGHYVQLAGIYAKSRKWDDVVRVRRLMVERVPIKVAGWSLIEVEDRVHRFVAGDRDH 505
Query: 302 EVSTSIYSMVDQLMDHLKSVGYPCKH 327
+ S+ IY M++ + + G KH
Sbjct: 506 DHSSDIYKMLEIIGLMVSEAGCSPKH 531
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 9/154 (5%)
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
D +C + +T NS++ + G ++ A +F MP+++VVSW+ +I +G +
Sbjct: 174 DEVCSDVVT-----WNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLE 228
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS-TFGISPDVAHYAC 184
+ +E F MR G+ P+E +LSA + GL+ GR+ + S F IS VA
Sbjct: 229 DGLECFRLMREKGIRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRIS--VAIGTG 286
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+VD+ + G + E+ L + M+ D W ++
Sbjct: 287 LVDMYAKCGCIEESRDLFDGM-MERDIWTWTVMI 319
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 192/320 (60%), Gaps = 1/320 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K V+WN++I + Q G EA+ LFC M G+ PD+ T VS++++ + + K
Sbjct: 401 KTNVTWNAMILGYAQNGCVNEALNLFCTMQSQGIKPDSFTFVSVITALADLSVTRQAKWI 460
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H N+ +V + +L++MYAKCGA++TA ++F M +++V++WN +I HG G
Sbjct: 461 HGLAIRTNMDTNVFVATALVDMYAKCGAIETARELFDMMQERHVITWNAMIDGYGTHGLG 520
Query: 125 KEAIEMFEKMR-ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
K A+++F+ M+ + L P++ITF ++SACSHSG VE G YYF +M +G+ P + HY
Sbjct: 521 KAALDLFDDMQNEASLKPNDITFLSVISACSHSGFVEEGLYYFKIMKEGYGLEPSMDHYG 580
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
MVDLLGR G L +A I ++P+KP V GA+LGACK N+E+G++ +L EL
Sbjct: 581 AMVDLLGRAGKLDDAWKFIHEMPIKPGITVLGAMLGACKIHKNIELGEKAADRLFELDPD 640
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
+ G Y+L++NMY+ + WD + K+R M G+ K S +E + F NH
Sbjct: 641 EGGYYMLVANMYASASMWDKVAKVRTAMEKKGLHKTPGCSLVEWRNEVHAFYSGSTNHPQ 700
Query: 304 STSIYSMVDQLMDHLKSVGY 323
S IY+ ++ L D +++ GY
Sbjct: 701 SKRIYAFLETLGDEIRAAGY 720
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 5/233 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN VSWN++I Q G+ EA F +M V P N +++ L +CS++GDL G
Sbjct: 297 MSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERG 356
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + ++ +V++ NSL++MY+KC + A +F + K V+WN +I A +
Sbjct: 357 KFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQN 416
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EA+ +F M++ G+ PD TF +++A + + ++ GL T + +V
Sbjct: 417 GCVNEALNLFCTMQSQGIKPDSFTFVSVITALADLSVTRQAKWIHGLAIRT-NMDTNVFV 475
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
+VD+ + G + A L + + + W A++ T G +GK L
Sbjct: 476 ATALVDMYAKCGAIETARELFDMMQER-HVITWNAMIDGYGTHG---LGKAAL 524
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 113/217 (52%), Gaps = 2/217 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ V WN++++ + Q G +A++L M G D+ TLVS+L + + + L +G
Sbjct: 196 MPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGLRIG 255
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y V + +L++MY KCG ++T +F M KNVVSWN +I LA +
Sbjct: 256 RSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVIDGLAQN 315
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA F KM + P ++ G L ACS+ G +E G++ L+ +S +V+
Sbjct: 316 GESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGKFVHRLLDQ-MKLSSNVSV 374
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
++ + + + A S+ L K + V W A++
Sbjct: 375 MNSLISMYSKCKRVDIAASVFDNLEGKTN-VTWNAMI 410
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V +++++ +V+ +E++ F RM V P +L C DL G + H
Sbjct: 101 VLYHTLLKGYVKNSSLSESLSFFKRMQNDEVEPVVYDFTYLLQLCGENFDLKKGMEVHGM 160
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ N ++ S++N+YAKC + A +F MP++++V WN ++ A +G ++A
Sbjct: 161 LIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPERDLVCWNTVVAGYAQNGFARKA 220
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACS--------------------------------- 154
+++ M+ G D IT +L A +
Sbjct: 221 LKLVLDMQEDGKKADSITLVSVLPAVADVKGLRIGRSVHGYAVRLGFDSMVNVSTALLDM 280
Query: 155 --HSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKL---PMKP 209
G VE GR F MSS +V + ++D L + G EA + K+ ++P
Sbjct: 281 YFKCGEVETGRLVFQRMSSK-----NVVSWNTVIDGLAQNGESEEAFATFLKMFEEKVEP 335
Query: 210 DAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL--LSNMYSESQRWD 262
V L AC G+LE GK + +LL+ + S + V+ L +MYS+ +R D
Sbjct: 336 TNVSMMGALHACSNLGDLERGK-FVHRLLDQMKLSSNVSVMNSLISMYSKCKRVD 389
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/319 (39%), Positives = 187/319 (58%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ VSWNS++S Q G EA+ +F +M +G+ ++ T S +S+ +++ ++ +GK+
Sbjct: 651 KDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQI 710
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I + N+L+ +YAKCG + A FF MP KN +SWN +I + HG G
Sbjct: 711 HGMIRKTGYDSETEVSNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYSQHGCG 770
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA+++FE M+ + P+ +TF G+LSACSH GLV+ G YF MS + P HYAC
Sbjct: 771 FEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYAC 830
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VDLLGR G L A ++++P++PDA+VW LL AC N+++G+ LLEL D
Sbjct: 831 VVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKD 890
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
S YVL+SNMY+ S +WD + R++M D G+KK S +E+D + F D+NH +
Sbjct: 891 SATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRA 950
Query: 305 TSIYSMVDQLMDHLKSVGY 323
IY + L GY
Sbjct: 951 DMIYEYLRGLDFRAAENGY 969
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 150/311 (48%), Gaps = 38/311 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ +++VSW ++IS Q G EAM LFC+M SG+ P S+LS+C+ + G
Sbjct: 244 LKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFEFG 303
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + + +CN+L+ +Y++ G L +A IF M Q++ VS+N +I LA
Sbjct: 304 KQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQ 363
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G A+ +F+KM PD +T LLSAC+ G + G+ + G++ D+
Sbjct: 364 GYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKA-GMTSDIVV 422
Query: 182 YACMVD-----------------------------LLGRGGF--LGEAMSLIQKLPMK-- 208
++D L+G G L ++ + ++ ++
Sbjct: 423 EGSLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGI 482
Query: 209 -PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMK 265
P+ + ++L C T G ++G+QI Q+L+ G + +YV +L +MY++ + D
Sbjct: 483 VPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTG-FQFNVYVSSVLIDMYAKHGKLDHAL 541
Query: 266 KIRKIMNDSGI 276
KI + + ++ +
Sbjct: 542 KIFRRLKENDV 552
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VS+NS+IS Q+G A+ LF +M + PD T+ S+LS+C+ +G L G
Sbjct: 345 MSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNG 404
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H Y +T + + SL+++Y KC ++TA + F +NVV WNV++
Sbjct: 405 KQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVGYGQL 464
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+ ++ ++F +M+ G+ P++ T+ +L C+ G ++G + T G +V
Sbjct: 465 DNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKT-GFQFNVYV 523
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ ++D+ + G L A+ + ++L + D V W A++ + K++ + G
Sbjct: 524 SSVLIDMYAKHGKLDHALKIFRRLK-ENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQG 582
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 118/238 (49%), Gaps = 2/238 (0%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+N V WN ++ + Q ++ ++F +M + G++P+ T SIL +C+ +G LG++
Sbjct: 448 TENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQ 507
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + +V + + L++MYAK G L A+ IF + + +VVSW +I H
Sbjct: 508 IHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDK 567
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
EA+ +F++M+ G+ D I F +SAC+ ++ GR S G S D++
Sbjct: 568 FTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHA-QSCLSGYSDDLSIGN 626
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+V L R G + EA + ++ K D V W +L+ G E I Q+ + G
Sbjct: 627 ALVSLYARCGKVREAYAAFDQIYAK-DNVSWNSLVSGFAQSGYFEEALNIFAQMNKAG 683
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 118/274 (43%), Gaps = 34/274 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCS-HMGDLAL 60
MP+++ WN I + + E LF RM V D +L CS +
Sbjct: 142 MPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRF 201
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
++ H + S +CN L+++Y K G L +A +F + ++ VSW +I L+
Sbjct: 202 VEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQ 261
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL------------ 168
+G +EA+ +F +M SG+ P F+ +LSAC+ E G+ GL
Sbjct: 262 NGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYV 321
Query: 169 -------------MSSTFGI-----SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM--- 207
+SS I D Y ++ L + G++ A++L +K+ +
Sbjct: 322 CNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQ 381
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
KPD V +LL AC + G L GKQ ++ G
Sbjct: 382 KPDCVTVASLLSACASVGALPNGKQFHSYAIKAG 415
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 112/213 (52%), Gaps = 2/213 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ VSW ++I+ + Q + EA+ LF M G+ DN S +S+C+ + L G++ H
Sbjct: 551 DVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIH 610
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
C + + +++ N+L+++YA+CG ++ A F + K+ VSWN ++ A G +
Sbjct: 611 AQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFE 670
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+ +F +M +GL + TF +SA ++ V +G+ G++ T G + +
Sbjct: 671 EALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKT-GYDSETEVSNAL 729
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ L + G + +A ++P K + + W +++
Sbjct: 730 ITLYAKCGTIDDAERHFFEMPDK-NEISWNSMI 761
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 101/267 (37%), Gaps = 37/267 (13%)
Query: 37 GVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTA 96
GV ++ T + +L C + G K H I V LC L++ Y G L A
Sbjct: 76 GVRANSQTFLWLLEGCLNSRSFYDGLKLHGKILKMGFCDEVVLCERLIDFYLAFGDLNCA 135
Query: 97 MDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS 156
+++F MP +++ WN I +F +M + DE F +L CS +
Sbjct: 136 VNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGN 195
Query: 157 GL-------VEMGRYYFGLMSSTFGISP------------------------DVAHYACM 185
+ + G SSTF +P D + M
Sbjct: 196 AVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAM 255
Query: 186 VDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
+ L + G+ EAM L ++ P ++ ++L AC E GKQ+ +L+ G
Sbjct: 256 ISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQG- 314
Query: 243 YDSGLYV--LLSNMYSESQRWDDMKKI 267
+ S YV L +YS S ++I
Sbjct: 315 FSSETYVCNALVTLYSRSGNLSSAEQI 341
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP KN +SWNS+I+ + Q G EA++LF M V+P++ T V +LS+CSH+G + G
Sbjct: 749 MPDKNEISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEG 808
Query: 62 KKAHDYICD-NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
+ + +N+ ++++ + G L A MP Q + + W ++ A
Sbjct: 809 ISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACN 868
Query: 120 LH 121
+H
Sbjct: 869 VH 870
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/319 (38%), Positives = 192/319 (60%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+ VSWNSIIS E Q A+ F RM GV+PDN T ++L C+++ + LGK+
Sbjct: 537 RTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQI 596
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I + V + +++++MY+KCG +Q + +F P+++ V+W+ +I A A HG G
Sbjct: 597 HGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLG 656
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
++AI++FE+M+ + P+ F +L AC+H G V+ G +YF M S +G+ P + HY+C
Sbjct: 657 EDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSC 716
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLLGR G + EA+ LI+ +P + D V+W LLG C+ GN+E+ ++ LL+L D
Sbjct: 717 MVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQD 776
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
S YVLLSN+Y+ + W ++ KIR M + +KK S I++ + F+V DK H S
Sbjct: 777 SSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRS 836
Query: 305 TSIYSMVDQLMDHLKSVGY 323
IY L+D +K GY
Sbjct: 837 EEIYQQTHLLVDEMKWDGY 855
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 122/239 (51%), Gaps = 5/239 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +K+AVSWN+II+ H Q E + LF M S + PD+ T S++ +C+ L G
Sbjct: 433 MEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYG 492
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + + + + +++++MY KCG L A I + ++ VSWN II +
Sbjct: 493 MEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSE 552
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ A+ F +M G+ PD T+ +L C++ VE+G+ G + + DV
Sbjct: 553 KQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILK-LQLHSDVYI 611
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+ +VD+ + G + ++ + +K P K D V W A++ A G +G+ +K E+
Sbjct: 612 ASTIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMICAYAYHG---LGEDAIKLFEEM 666
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 85/161 (52%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSWNS++SC++Q G H +++E+F +M + + D AT +L +C+ + D LG
Sbjct: 130 MPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLG 189
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H V +L++MY+ C L A +IF MP++N V W+ +I +
Sbjct: 190 LQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRN 249
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG 162
E +++++ M G+ + TF +C+ E+G
Sbjct: 250 DRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELG 290
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 4/220 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N+V W+++I+ +V+ + E ++L+ M G+ AT S SC+ + LG
Sbjct: 231 MPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELG 290
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y N + + ++MYAKC + A +F P S N +I A
Sbjct: 291 TQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQ 350
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH-SGLVEMGRYYFGLMSSTFGISPDVA 180
EA+E+F ++ S L DEI+ +G L+ACS G +E G GL + G+ ++
Sbjct: 351 DQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLE-GIQLHGL-AVKCGLDFNIC 408
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
++D+ + G L EA + + +K DAV W A++ A
Sbjct: 409 VANTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAIIAA 447
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 139/313 (44%), Gaps = 42/313 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
P S N++I + ++ Q EA+E+F + S + D +L L++CS + G
Sbjct: 332 FPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG 391
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + ++ + N++++MYAKCGAL A IF M K+ VSWN II A +
Sbjct: 392 IQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQN 451
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+E + +F M S + PD+ TF ++ AC+ + G G + + G+ D
Sbjct: 452 EHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKS-GMGLDWFV 510
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMK--------------------------------- 208
+ ++D+ + G L EA + ++L +
Sbjct: 511 GSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGV 570
Query: 209 -PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMK 265
PD + +L C +E+GKQI Q+L+L + S +Y+ + +MYS+ D
Sbjct: 571 IPDNFTYATVLDICANLATVELGKQIHGQILKL-QLHSDVYIASTIVDMYSKCGNMQD-- 627
Query: 266 KIRKIMNDSGIKK 278
+IM + K+
Sbjct: 628 --SRIMFEKAPKR 638
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 44 TLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM 103
T I CS++ + GK+AH I +V + N L+ Y KC L A ++F M
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 104 PQKNVVSWNVIIGALA-------------------------------LHGSGKEAIEMFE 132
PQ++V+SWN +I A +G +++IE+F
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 133 KMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL----MSSTFGISPDVAHYACMVDL 188
KMR + D TF +L AC +G+ + G GL ++ G DV +VD+
Sbjct: 160 KMRLLEIQHDYATFAVVLKAC--TGIEDYG---LGLQVHCLAIQMGFDSDVVTGTALVDM 214
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
L A ++ ++P + ++V W A++ G ++ K +L+ G
Sbjct: 215 YSTCKKLDHAFNIFCEMPER-NSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEG 266
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG- 61
P ++ V+W+++I + G +A++LF M + V P++ +S+L +C+HMG + G
Sbjct: 636 PKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGL 695
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALAL 120
+ + + + ++++ + G + A+++ MP + + V W ++G L
Sbjct: 696 HYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRL 755
Query: 121 HGSGKEAIEMFEKMRASGLFPD 142
G+ +E+ EK S L D
Sbjct: 756 QGN----VEVAEKAANSLLQLD 773
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/319 (38%), Positives = 192/319 (60%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+ VSWNSIIS E Q A+ F RM GV+PDN T ++L C+++ + LGK+
Sbjct: 537 RTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQI 596
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I + V + +++++MY+KCG +Q + +F P+++ V+W+ +I A A HG G
Sbjct: 597 HGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLG 656
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
++AI++FE+M+ + P+ F +L AC+H G V+ G +YF M S +G+ P + HY+C
Sbjct: 657 EDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSC 716
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLLGR G + EA+ LI+ +P + D V+W LLG C+ GN+E+ ++ LL+L D
Sbjct: 717 MVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQD 776
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
S YVLLSN+Y+ + W ++ KIR M + +KK S I++ + F+V DK H S
Sbjct: 777 SSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRS 836
Query: 305 TSIYSMVDQLMDHLKSVGY 323
IY L+D +K GY
Sbjct: 837 EEIYQQTHLLVDEMKWDGY 855
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 122/239 (51%), Gaps = 5/239 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +K+AVSWN+II+ H Q E + LF M S + PD+ T S++ +C+ L G
Sbjct: 433 MEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYG 492
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + + + + +++++MY KCG L A I + ++ VSWN II +
Sbjct: 493 MEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSE 552
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ A+ F +M G+ PD T+ +L C++ VE+G+ G + + DV
Sbjct: 553 KQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILK-LQLHSDVYI 611
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+ +VD+ + G + ++ + +K P K D V W A++ A G +G+ +K E+
Sbjct: 612 ASTIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMICAYAYHG---LGEDAIKLFEEM 666
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 85/161 (52%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSWNS++SC++Q G H +++E+F +M + + D AT +L +C+ + D LG
Sbjct: 130 MPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLG 189
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H V +L++MY+ C L A +IF MP++N V W+ +I +
Sbjct: 190 LQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRN 249
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG 162
E +++++ M G+ + TF +C+ E+G
Sbjct: 250 DRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELG 290
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 4/220 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N+V W+++I+ +V+ + E ++L+ M G+ AT S SC+ + LG
Sbjct: 231 MPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELG 290
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y N + + ++MYAKC + A +F P S N +I A
Sbjct: 291 TQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQ 350
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH-SGLVEMGRYYFGLMSSTFGISPDVA 180
EA+E+F ++ S L DEI+ +G L+ACS G +E G GL + G+ ++
Sbjct: 351 DQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLE-GIQLHGL-AVKCGLDFNIC 408
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
++D+ + G L EA + + +K DAV W A++ A
Sbjct: 409 VANTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAIIAA 447
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 139/313 (44%), Gaps = 42/313 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
P S N++I + ++ Q EA+E+F + S + D +L L++CS + G
Sbjct: 332 FPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG 391
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + ++ + N++++MYAKCGAL A IF M K+ VSWN II A +
Sbjct: 392 IQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQN 451
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+E + +F M S + PD+ TF ++ AC+ + G G + + G+ D
Sbjct: 452 EHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKS-GMGLDWFV 510
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMK--------------------------------- 208
+ ++D+ + G L EA + ++L +
Sbjct: 511 GSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGV 570
Query: 209 -PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMK 265
PD + +L C +E+GKQI Q+L+L + S +Y+ + +MYS+ D
Sbjct: 571 IPDNFTYATVLDICANLATVELGKQIHGQILKL-QLHSDVYIASTIVDMYSKCGNMQD-- 627
Query: 266 KIRKIMNDSGIKK 278
+IM + K+
Sbjct: 628 --SRIMFEKAPKR 638
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 44 TLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM 103
T I CS++ + GK+AH I +V + N L+ Y KC L A ++F M
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 104 PQKNVVSWNVIIGALA-------------------------------LHGSGKEAIEMFE 132
PQ++V+SWN +I A +G +++IE+F
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 133 KMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL----MSSTFGISPDVAHYACMVDL 188
KMR + D TF +L AC +G+ + G GL ++ G DV +VD+
Sbjct: 160 KMRLLEIQHDYATFAVVLKAC--TGIEDYG---LGLQVHCLAIQMGFDSDVVTGTALVDM 214
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
L A ++ ++P + ++V W A++ G ++ K +L+ G
Sbjct: 215 YSTCKKLDHAFNIFCEMPER-NSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEG 266
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG- 61
P ++ V+W+++I + G +A++LF M + V P++ +S+L +C+HMG + G
Sbjct: 636 PKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGL 695
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALAL 120
+ + + + ++++ + G + A+++ MP + + V W ++G L
Sbjct: 696 HYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRL 755
Query: 121 HGSGKEAIEMFEKMRASGLFPD 142
G+ +E+ EK S L D
Sbjct: 756 QGN----VEVAEKAANSLLQLD 773
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 203/312 (65%), Gaps = 1/312 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M + +VSWNS+IS +V+ G+ EA+ELF +M V G T+VS+L++C+H+G L G
Sbjct: 223 MITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHG 282
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K HDYI N+ ++V + ++++MY KCG+++ A+++F P++ + WN II LA++
Sbjct: 283 KWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMN 342
Query: 122 GSGKEAIEMFEKMRASGLF-PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G +EA E F K+ +S L PD ++F G+L+AC H G + R YF LM + + I P +
Sbjct: 343 GHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEPSIK 402
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY C+VD+LG+ G L EA LI+ +P+KPDA++WG+LL +C+ N+++ ++ +++ EL
Sbjct: 403 HYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNVQIARRAAQRVYEL 462
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
D+ YVL+SN+++ S ++++ + R +M ++ +K SSIE+ G ++F+ +
Sbjct: 463 NPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYGEVHEFIAGGRL 522
Query: 301 HEVSTSIYSMVD 312
H + IY +++
Sbjct: 523 HPKTQEIYHLLN 534
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 120/313 (38%), Gaps = 73/313 (23%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP N SWN+II + A+ LF M S + P T S+ + + +G G
Sbjct: 87 MPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYG 146
Query: 62 KKAH-----------DYICDNNITV------------------------SVTLCNSLMNM 86
+ H +IC+ I + V NS++
Sbjct: 147 AQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMG 206
Query: 87 YAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITF 146
YAKCG + + ++F M + VSWN +I +G EA+E+F KM+ G E T
Sbjct: 207 YAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTM 266
Query: 147 TGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP 206
LL+AC+H G ++ G++ + +V ++D+ + G + A+ + + P
Sbjct: 267 VSLLNACAHLGALQHGKWVHDYIKRNH-FELNVIVVTAIIDMYCKCGSVENAVEVFETCP 325
Query: 207 -----------------------------------MKPDAVVWGALLGACKTFGNLEMGK 231
+KPD+V + +L ACK G + +
Sbjct: 326 RRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKAR 385
Query: 232 QILKQLLELGRYD 244
+ L + +Y+
Sbjct: 386 DYFE--LMMNKYE 396
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/337 (40%), Positives = 199/337 (59%), Gaps = 8/337 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+PV+N VSW ++I+ + Q G+ EA+ LF +M + V D LV++LS+C+ +GDL LG
Sbjct: 206 IPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRRARVELDQVVLVAVLSACAELGDLKLG 265
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y+ + SV L N+LM+MYA CG + A +F M K VSW +II A A
Sbjct: 266 RWIHWYVQERQRQASVRLNNALMHMYASCGIIDEAYRMFTKMSWKTTVSWTIIIMAFAKQ 325
Query: 122 GSGKEAIEMFEKMRA-----SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
G GKEA+++F+ M + SG+ PD TF L ACSH+G VE G F M T+ IS
Sbjct: 326 GLGKEALDLFKDMLSDGVGKSGIRPDGTTFIAALCACSHAGFVEEGCRIFESMIHTWRIS 385
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
+ HY CMVDLL R G L EA LI+ +P KP+ +WGALLG C+ N E+ ++
Sbjct: 386 LQIEHYGCMVDLLSRAGCLDEAYRLIETMPFKPNDAIWGALLGGCRIHKNSELASRVANT 445
Query: 237 LL-ELGRYD--SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQ 293
L+ EL D +G VLLSN+Y+ + RW D+ +R+ M + G+KK S I+I G +
Sbjct: 446 LVAELDSTDQAAGYLVLLSNIYAFAGRWQDVIAVRQKMIEMGVKKPPGQSWIQIYGVVHN 505
Query: 294 FMVDDKNHEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
F+V D H+ S+ IY + ++ + + GY ++V
Sbjct: 506 FVVGDMTHKHSSLIYETLCEITEQARVEGYKPDITEV 542
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 116/272 (42%), Gaps = 39/272 (14%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH---- 65
WN +I + ++++ + +M ++ PD T +LS+C G + G++ H
Sbjct: 82 WNHMIRAYASSITPWKSVQYYNQMVLNACEPDGFTYSFLLSACVRGGLVREGEQLHGIVL 141
Query: 66 ---------------------------DYICDNNITVSVTLCNSLMNMYAKCGALQTAMD 98
Y+ D+ SV NSL+ Y KCG A +
Sbjct: 142 AKGYCSDVFVNTNLINFYADCGGVEQARYVFDDMTQRSVVSWNSLLVGYVKCGDFDAARN 201
Query: 99 IFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGL 158
+F +P +NVVSW +I A +G EA+ +F +MR + + D++ +LSAC+ G
Sbjct: 202 VFEEIPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRRARVELDQVVLVAVLSACAELGD 261
Query: 159 VEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+++GR+ + V ++ + G + EA + K+ K V W ++
Sbjct: 262 LKLGRWIHWYVQER-QRQASVRLNNALMHMYASCGIIDEAYRMFTKMSWKT-TVSWTIII 319
Query: 219 GACKTFGNLEMGKQIL---KQLLELGRYDSGL 247
A F +GK+ L K +L G SG+
Sbjct: 320 MA---FAKQGLGKEALDLFKDMLSDGVGKSGI 348
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 45 LVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP 104
+ S+L +C++ L + H + N ++ + L++ YA G LQ A +F +
Sbjct: 18 IFSLLQTCNNTETNIL--QIHTQVILNGLSHKHNIIAKLLSFYAASGKLQHAHKLFIQIH 75
Query: 105 QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY 164
WN +I A A + ++++ + +M + PD T++ LLSAC GLV G
Sbjct: 76 NPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNACEPDGFTYSFLLSACVRGGLVREGEQ 135
Query: 165 YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTF 224
G++ + G DV +++ G + +A + + + V W +LL
Sbjct: 136 LHGIVLAK-GYCSDVFVNTNLINFYADCGGVEQARYVFDDMTQR-SVVSWNSLLVGYVKC 193
Query: 225 GNLEMGKQILKQL 237
G+ + + + +++
Sbjct: 194 GDFDAARNVFEEI 206
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 196/322 (60%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPVK++V WN +I Q G+ A++LF +M SG D+ +L + LS+C++ L G
Sbjct: 541 MPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYG 600
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H ++ N+ + ++L++MY+KCG L A +F M KN VSWN II A H
Sbjct: 601 KELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNH 660
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +E +++F +M +G+ PD +TF ++SAC H+GLV+ G YYF M+ +GI + H
Sbjct: 661 GRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEH 720
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ACMVDL GR G L EA I+ +P PDA WG+LLGAC+ GN+E+ K K L+EL
Sbjct: 721 FACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELD 780
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+SG YVLLSN+++ + W+ + K+R +M + G++K S I+++G + F D H
Sbjct: 781 PNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCH 840
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
S IY ++ L+ L+ GY
Sbjct: 841 PQSVEIYLILKNLLLELRKHGY 862
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 140/296 (47%), Gaps = 36/296 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+PV++ + WN +++ +V+ G A+ F M S V P++ + V +LS C+ G + G
Sbjct: 238 LPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAG 297
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + T+ N+++ MY+KCG L A IF MPQ + V+WN +I +
Sbjct: 298 IQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQN 357
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EA+ +F+ M SG+ D ITF L + SG ++ + + G+ DV
Sbjct: 358 GFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRH-GVPFDVYL 416
Query: 182 YACMVDLLGRGGFLG-------------------------------EAMSLIQKL---PM 207
+ +VD+ +GG + EA++L + L M
Sbjct: 417 KSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGM 476
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD-SGLYVLLSNMYSESQRWD 262
P+ + ++L AC +L++GK++ +L+ G + + ++ MY++S R D
Sbjct: 477 VPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLD 532
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 116/231 (50%), Gaps = 2/231 (0%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
++IS +V G + EA+ LF + G++P+ T+ S+L +C+ + L LGK+ H I
Sbjct: 449 TAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILK 508
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEM 130
+ + +S+ MYAK G L A F MP K+ V WN++I + + +G + AI++
Sbjct: 509 KGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDL 568
Query: 131 FEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLG 190
F +M SG D ++ + LSAC++ + G+ + IS D + ++D+
Sbjct: 569 FRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFIS-DTFVASTLIDMYS 627
Query: 191 RGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ G L A S+ + K + V W +++ A G + +++E G
Sbjct: 628 KCGKLALARSVFDMMDWK-NEVSWNSIIAAYGNHGRPRECLDLFHEMVEAG 677
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 5/247 (2%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP + V+WN +I+ +VQ G EA+ LF M SGV D+ T S L S G L
Sbjct: 338 IMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKY 397
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K+ H YI + + V L ++L+++Y K G ++ A F +V +I L
Sbjct: 398 CKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVL 457
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR-YYFGLMSSTFGISPDV 179
+G EA+ +F + G+ P+ +T +L AC+ +++G+ + ++ G+
Sbjct: 458 NGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKK--GLENVC 515
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ + + + G L A +++P+K D+V W ++ + G E+ + +Q+
Sbjct: 516 QVGSSITYMYAKSGRLDLAYQFFRRMPVK-DSVCWNLMIVSFSQNGKPELAIDLFRQMGT 574
Query: 240 LG-RYDS 245
G ++DS
Sbjct: 575 SGTKFDS 581
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 110/236 (46%), Gaps = 4/236 (1%)
Query: 7 AVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHD 66
++ WN +I G A+ F RM S V PD T ++ +C + ++ L K H+
Sbjct: 142 SLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHE 201
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
+ + + +SL+ +Y G + A +F +P ++ + WNV++ +G
Sbjct: 202 LARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNS 261
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL-MSSTFGISPDVAHYACM 185
A+ F++MR S + P+ ++F LLS C+ G+V G GL + S F P VA+ +
Sbjct: 262 ALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVAN--TI 319
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ + + G L +A + +P + D V W L+ G + + K ++ G
Sbjct: 320 ITMYSKCGNLFDARKIFDIMP-QTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSG 374
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MM KN VSWNSII+ + G+ E ++LF M +G+ PD+ T + I+S+C H G +
Sbjct: 641 MMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDE 700
Query: 61 GKKAHDYIC---DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIG 116
G + + C + I + ++++Y + G L A D MP + +W ++G
Sbjct: 701 G--IYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLG 758
Query: 117 ALALHGS 123
A LHG+
Sbjct: 759 ACRLHGN 765
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 76 SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMR 135
S+TL + ++ MY C + + ++F + + WN +I ++ G A+ F +M
Sbjct: 110 SLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRML 169
Query: 136 ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFL 195
S + PD+ TF ++ AC V + + L S G D+ + ++ L G++
Sbjct: 170 GSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARS-MGFHMDLFIGSSLIKLYTDNGYI 228
Query: 196 GEAMSLIQKLPMKPDAVVWGALL 218
+A L +LP++ D ++W +L
Sbjct: 229 HDAKYLFDELPVR-DCILWNVML 250
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/324 (40%), Positives = 202/324 (62%), Gaps = 3/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLAL 60
MP +N V+W +I +V G EA L M G TL S+LS+CS GD+ +
Sbjct: 215 MPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCV 274
Query: 61 GKKAHDY-ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G+ H Y + + + V + SL++MYAKCG + A+ +F M ++NVV+WN ++G LA
Sbjct: 275 GRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLA 334
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+HG GK A++MF M + PD +TF LLSACSHSGLVE G YF + + I P++
Sbjct: 335 MHGMGKIAVDMFPSM-VEEVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYRIKPEI 393
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HYACMV LLGR G L EA +++ + + P+ VV G+L+G+C G L++G++I++ LLE
Sbjct: 394 EHYACMVGLLGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRLQLGEKIMRDLLE 453
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
+ ++ +++LSNMY+ S + + +R+++ GIKK +SSI +DG +QF+ DK
Sbjct: 454 MDPLNTEYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSIYVDGKLHQFIAGDK 513
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
+H ++ IY +D+++ L+S GY
Sbjct: 514 SHTRTSEIYMKLDEMICRLRSAGY 537
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 126/287 (43%), Gaps = 42/287 (14%)
Query: 25 EAMELFCRMCVSGVMPDNATLVSILSSCSHMG--DLALGKKAHDYICDNNITVSVTLCNS 82
E+++LF +M + D +V L++C+ +G D +G + H + +CN+
Sbjct: 104 ESLKLFIQMRQFDLPLDGVVMVCALNACARLGGGDTKVGSQMHVGVVKFGFVKFDKVCNA 163
Query: 83 LMNMYAKCGALQTAMDIFFG-------------------------------MPQKNVVSW 111
LMN+Y K G + A +F G MP++N V+W
Sbjct: 164 LMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEVAW 223
Query: 112 NVIIGALALHGSGKEAIEMFEKMR-ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMS 170
V+I +G KEA + ++M G +T +LSACS SG V +GR+
Sbjct: 224 TVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAV 283
Query: 171 STFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMG 230
G+ V +VD+ + G + A+S+ + + +K + V W A+LG G ++
Sbjct: 284 KEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSM-LKRNVVAWNAMLGGLAMHGMGKIA 342
Query: 231 KQILKQLLELGRYDSGLYVLLSNMYSES----QRWD---DMKKIRKI 270
+ ++E + D ++ L + S S + WD D++ + +I
Sbjct: 343 VDMFPSMVEEVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYRI 389
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 196/320 (61%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ V+W +++ VQ ++ +A+ F RM + V+P+ TL S+LS+C+H+G L G
Sbjct: 269 MPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQG 328
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y+ N+ ++ L SL++MYAKCG + A+ +F + KNV +W +I LA+H
Sbjct: 329 RLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVH 388
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G A+ +F +M SGL P+++TF G+L ACSH G V+ G+ F +M T+ + P++ H
Sbjct: 389 GDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEH 448
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDLLGR G L +A +I +PMKP V GALLGAC + + MG+ I L+ L
Sbjct: 449 YGCMVDLLGRAGCLEDAKQIIDNMPMKPSPGVLGALLGACVSHKDFVMGEHIGNILVNLQ 508
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ + Y LL+N+YS Q W+ + ++RK+M + ++K S IE+ G ++F D +H
Sbjct: 509 QNHNTGYALLANLYSTCQNWEAVARVRKLMKGTQVEKTPGYSWIEVAGSMHEFKAFDHSH 568
Query: 302 EVSTSIYSMVDQLMDHLKSV 321
+ +Y M++ L+ +K V
Sbjct: 569 SEFSCVYLMLENLILQMKMV 588
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 138/274 (50%), Gaps = 4/274 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P ++ V+W ++I+ V+ G EA+ F M + GV+ D T+ S+L + + +GD GK
Sbjct: 168 PERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGK 227
Query: 63 KAHD-YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y+ + + ++ +L++MY KCG + A +F MP ++VV+W V++
Sbjct: 228 RVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQC 287
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
++A+ F +M + P+E T T +LSAC+H G ++ GR M + +
Sbjct: 288 KKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHN-DCNLNAVL 346
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+VD+ + G + +A+ + + L +K + W A++ G+ I ++LE G
Sbjct: 347 GTSLVDMYAKCGCVDKALMVFENLQVK-NVHTWTAMINGLAVHGDALGALNIFSRMLESG 405
Query: 242 -RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDS 274
R + ++ + S D+ KK+ ++M +
Sbjct: 406 LRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHT 439
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 6/200 (3%)
Query: 30 FCRMCVSGVMPDNATLVSILSSCSHMG--DLALGKKAHDYICDNNITVSVTLCNSLMNMY 87
+ +M GV PD T +L S G + L + + +CN ++ +
Sbjct: 92 YAKMHEMGVQPDKHTFPLLLKIFSKNGVPNDHLPFMVYAQVFKLGFDHDCFVCNGFISAF 151
Query: 88 AKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFT 147
G ++ A +F P++++V+W +I +G EA+ F +MR G+ D T
Sbjct: 152 GCSGFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVA 211
Query: 148 GLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM 207
+L A + G G+ G T + D + Y +VD+ + G+ +A + ++P
Sbjct: 212 SVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPY 271
Query: 208 KPDAVVWGALLGA---CKTF 224
+ D V W ++ CK +
Sbjct: 272 R-DVVAWTVVVAGFVQCKKY 290
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 196/320 (61%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ V+W +++ VQ ++ +A+ F RM + V+P+ TL S+LS+C+H+G L G
Sbjct: 269 MPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQG 328
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y+ N+ ++ L SL++MYAKCG + A+ +F + KNV +W +I LA+H
Sbjct: 329 RLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVH 388
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G A+ +F +M SGL P+++TF G+L ACSH G V+ G+ F +M T+ + P++ H
Sbjct: 389 GDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEH 448
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDLLGR G L +A +I +PMKP V GALLGAC + + MG+ I L+ L
Sbjct: 449 YGCMVDLLGRAGCLEDAKQIIDNMPMKPSPGVLGALLGACVSHKDFVMGEHIGNILVNLQ 508
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ + Y LL+N+YS Q W+ + ++RK+M + ++K S IE+ G ++F D +H
Sbjct: 509 QNHNTGYALLANLYSTCQNWEAVARVRKLMKGTQVEKTPGYSWIEVAGSMHEFKAFDHSH 568
Query: 302 EVSTSIYSMVDQLMDHLKSV 321
+ +Y M++ L+ +K V
Sbjct: 569 SEFSCVYLMLENLILQMKMV 588
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 138/274 (50%), Gaps = 4/274 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P ++ V+W ++I+ V+ G EA+ F M + GV+ D T+ S+L + + +GD GK
Sbjct: 168 PERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGK 227
Query: 63 KAHD-YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y+ + + ++ +L++MY KCG + A +F MP ++VV+W V++
Sbjct: 228 RVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQC 287
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
++A+ F +M + P+E T T +LSAC+H G ++ GR M + +
Sbjct: 288 KKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHN-DCNLNAVL 346
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+VD+ + G + +A+ + + L +K + W A++ G+ I ++LE G
Sbjct: 347 GTSLVDMYAKCGCVDKALMVFENLQVK-NVHTWTAMINGLAVHGDALGALNIFSRMLESG 405
Query: 242 -RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDS 274
R + ++ + S D+ KK+ ++M +
Sbjct: 406 LRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHT 439
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 6/200 (3%)
Query: 30 FCRMCVSGVMPDNATLVSILSSCSHMG--DLALGKKAHDYICDNNITVSVTLCNSLMNMY 87
+ +M GV PD T +L S G + L + + +CN ++ +
Sbjct: 92 YAKMHEMGVQPDKHTFPLLLKIFSKNGVPNDHLPFMVYAQVFKLGFDHDCFVCNGFISAF 151
Query: 88 AKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFT 147
G ++ A +F P++++V+W +I +G EA+ F +MR G+ D T
Sbjct: 152 GCSGFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVA 211
Query: 148 GLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM 207
+L A + G G+ G T + D + Y +VD+ + G+ +A + ++P
Sbjct: 212 SVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPY 271
Query: 208 KPDAVVWGALLGA---CKTF 224
+ D V W ++ CK +
Sbjct: 272 R-DVVAWTVVVAGFVQCKKY 290
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 251 bits (641), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/333 (40%), Positives = 200/333 (60%), Gaps = 11/333 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPVK VSW ++IS V+ G+ EA+E+F +M GV+P T VS+L +C+ + G
Sbjct: 237 MPVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRG 296
Query: 62 KKAHDYI-----CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ-KNVVSWNVII 115
K+ H I DN V V N+LM+MYAKCG +++A ++F M K+VVSWN +I
Sbjct: 297 KQVHCQIIRGRSSDNLFNVYV--FNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLI 354
Query: 116 GALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI 175
A +G G++++ +F++M S + P+ +TF G+LSAC+H+GLV G M +G+
Sbjct: 355 TGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGV 414
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQKLP--MKPDAVVWGALLGACKTFGNLEMGKQI 233
P HYA ++DLLGR L EAM LI+K+P + +WGA+LG C+ GNLE+ ++
Sbjct: 415 KPKSNHYALLIDLLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKA 474
Query: 234 LKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQ 293
+ L L ++G YV+LSN+Y+ S RW D +IR +M + G+KK A S IE+ ++
Sbjct: 475 AEALFALEPENTGRYVMLSNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRIELKESRHE 534
Query: 294 FMVDDKNHEVSTSIYSMVDQLMDHLKSVGY-PC 325
F+ DK H I +L+ H+ VGY PC
Sbjct: 535 FVAKDKFHPQIGEIREANSKLVQHMMDVGYQPC 567
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 39/275 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC--VSGVMPDNATLVSILSSCSHMGDLA 59
MP +N VS+NS+IS + H EA++ F M V G+M D TLVS++S+CS + +
Sbjct: 103 MPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVK 162
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGA--------------------------- 92
++ H ++ L N+L++ Y KCG
Sbjct: 163 WLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYT 222
Query: 93 ----LQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
+ A +F MP K VSW +I +G EA+E+F +M G+ P TF
Sbjct: 223 RASRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVS 282
Query: 149 LLSACSHSGLVEMGRYYFGLMSSTFGISPD----VAHYACMVDLLGRGGFLGEAMSLIQK 204
+L AC+ L+ G+ + G S D V + ++D+ + G + A +L +
Sbjct: 283 VLDACASEALIGRGKQVHCQIIR--GRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEM 340
Query: 205 LPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ D V W L+ G E + +++E
Sbjct: 341 MIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIE 375
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 119/293 (40%), Gaps = 58/293 (19%)
Query: 47 SILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKC---------------- 90
S++S+C L GK H + + L N L+++Y+KC
Sbjct: 16 SLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLPNK 75
Query: 91 ---------------GALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMR 135
G A +F MPQ+N+VS+N +I L H KEA++ F +M+
Sbjct: 76 TTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQ 135
Query: 136 --ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGG 193
GL DE T L+S CS V+ R G+ ++ G ++ ++D G+ G
Sbjct: 136 NGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGV-ATIVGFRTNLILNNALIDAYGKCG 194
Query: 194 FLGEAMSLIQKLPMKPDAVVWGALL----------GACKTFGNLEMGKQILKQLLELGRY 243
+ L + + ++ DAV W +++ ACK F + + +Y
Sbjct: 195 EPNSSFCLFRSM-VEKDAVSWTSMVVTYTRASRIDDACKVFNEMPV------------KY 241
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMV 296
L+S + ++ ++ +++ + + + + S+ +D C + ++
Sbjct: 242 TVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSV-LDACASEALI 293
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M+ VK+ VSWN++I+ Q G+ +++ +F RM S + P++ T + +LS+C+H G +
Sbjct: 341 MIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNA 400
Query: 61 GKKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK---NVVSWNVIIG 116
G + D + + L+++ + L+ AM + +P + ++ W ++G
Sbjct: 401 GLELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVLG 460
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
+HG+ +E+ K A LF E TG
Sbjct: 461 GCRVHGN----LELARKA-AEALFALEPENTG 487
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 251 bits (641), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 124/331 (37%), Positives = 201/331 (60%), Gaps = 2/331 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSW S+I+ V EA++LF RM GV + AT++S+L C+ G L++G
Sbjct: 157 MSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVG 216
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+K H + + I +C +L++MY+KCG L++A ++F + ++V W +I LA H
Sbjct: 217 RKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLACH 276
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G KEAIE+F +M + PDE T +LSA ++GLV G +F + + + P++ H
Sbjct: 277 GMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKH 336
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK--QLLE 239
+ CMVDLL +GG L EA I +PMKPDAV+W L+ ACK + E ++++K +L
Sbjct: 337 FGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWACKVHADTERAERLMKHLELQG 396
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
+ +DSG Y+L SN+Y+ + +W D ++R++MN G+ K S IE+DG ++F++ D
Sbjct: 397 MSAHDSGSYILASNVYASTGKWCDKAEVRELMNKKGLVKPPGSSRIEVDGVVHEFVMGDY 456
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
+H + I+ +DQ++D L+ GY K S+V
Sbjct: 457 DHPDTEKIFIKLDQMVDKLRKEGYNPKVSEV 487
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 11/244 (4%)
Query: 3 PVKNAVSWNSIISCHVQEG---QHAEAMELFCRMCVSGV---MPDNATLVSILSSCSHMG 56
P N+ +N+II + H +A+ LF M PD T L SC +
Sbjct: 51 PSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDTFTYSFALKSCGRLK 110
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
K+ H +I + + N+L++MY++ G L A +F M ++VVSW +I
Sbjct: 111 LTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIA 170
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
H EAI++F++M G+ +E T +L C+ SG + +GR G++ GI
Sbjct: 171 GFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEK-GID 229
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
++ + + G L A + + + D VW A++ G M K+ ++
Sbjct: 230 FKANVCTALIHMYSKCGCLESAREVFDDV-LDRDVFVWTAMIYGLACHG---MCKEAIEL 285
Query: 237 LLEL 240
LE+
Sbjct: 286 FLEM 289
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 121/323 (37%), Positives = 192/323 (59%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MM ++ VSW +II+ + Q G + + M + +M G + +T LS+C+ M L L
Sbjct: 321 MMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVL 380
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+ H + N+L+ MY KCG++ A D+F M K+++SWN ++ A
Sbjct: 381 GKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYAR 440
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G++A+ +F+ M+ +G PDEIT G+L ACSH+GL + G YF MS +GI+P+
Sbjct: 441 HGFGRQALLVFDSMKTAGFKPDEITMVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSK 500
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CM+DLLGR G L EA +L++ +P +PDA WGALLGA + GN E+G++ + + +
Sbjct: 501 HYNCMIDLLGRAGLLEEAHNLMRNMPFEPDAATWGALLGASRIHGNAELGEKAAEMVFNM 560
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
++G+YVLLSN+Y+ +W D+ K+R M GI+K S +E+ ++F V D
Sbjct: 561 EPNNAGMYVLLSNLYATLGKWVDVGKLRLKMRQLGIQKIPGYSWVEVQNKIHKFTVGDCF 620
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H IY+ ++++ +K G+
Sbjct: 621 HPEKDRIYAYLEEIDLKMKHEGH 643
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 36/260 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVS-----ILSSCSHMG 56
MPV+NA+SWN++IS + ++G +A LF V V A + + +L +
Sbjct: 198 MPVRNAISWNTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVF 257
Query: 57 DLALGKKAHDYICDNNITVS----------------------VTLCNSLMNMYAKCGALQ 94
D GK+ Y N+ ++ V N++++ Y + G +
Sbjct: 258 DEMPGKREMAY----NVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIA 313
Query: 95 TAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
A ++F M Q++ VSW II A G ++ + M KM+ G + TF LS C+
Sbjct: 314 QARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCA 373
Query: 155 HSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW 214
+ +G+ G T G ++++ + G +GEA + +++ +K D + W
Sbjct: 374 GMAALVLGKQVHGQAVKT-GYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLK-DIISW 431
Query: 215 GALLGACKTFGNLEMGKQIL 234
+L G G+Q L
Sbjct: 432 NTMLAGYARHG---FGRQAL 448
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 42/268 (15%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP K+AVSWN ++S +V+ G EA +F M D+ + +L+ G L
Sbjct: 104 LMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYK----DSISWNGLLAVYVQNGRLEE 159
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
++ + ++ + + N LM Y K L A +F MP +N +SWN +I A
Sbjct: 160 ARR----LFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYAR 215
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST-------- 172
G +A +FE+ +F T+T ++ A SG+++ R F M
Sbjct: 216 DGDLLQARRLFEESPVRDVF----TWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNVM 271
Query: 173 ----------------FGISP--DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW 214
F P +V + ++ G+ G + +A L + + D V W
Sbjct: 272 IAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQR-DCVSW 330
Query: 215 GALLGACKTFGNLEMGKQILKQLLELGR 242
A++ G+ E +++ L+++ R
Sbjct: 331 AAIIAGYAQTGHYE---KVMHMLVKMKR 355
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
N ++ Y K L A ++F MPQK+ VSWNV++ G EA +F+ M +
Sbjct: 83 NLMLTGYVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMP----Y 138
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
D I++ GLL+ +G +E R F + ++ + C++ + LG+A
Sbjct: 139 KDSISWNGLLAVYVQNGRLEEARRLF-----ESKVDWELISWNCLMGGYVKRKMLGDARR 193
Query: 201 LIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ--LLELGRYDSGLYVLL-SNMYSE 257
L +P++ +A+ W ++ G+L +++ ++ + ++ + + ++ + S M E
Sbjct: 194 LFDHMPVR-NAISWNTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDE 252
Query: 258 SQR-WDDMKKIRKI 270
++R +D+M R++
Sbjct: 253 ARRVFDEMPGKREM 266
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 184/286 (64%), Gaps = 1/286 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWN +ISC Q + EA +F M G PD+ATLV++L C+ +GD+ G
Sbjct: 200 MGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAG 259
Query: 62 KKAHDYICDNNITVSV-TLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H Y + V ++ NSL++ Y KCG L+ A +F M +KNVVSWN +I L L
Sbjct: 260 EWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGL 319
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G G+ +E+FEKM G+ P + TF G+L+ C+H+G V+ GR F M+ F +SP +
Sbjct: 320 NGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLE 379
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY C+VDLLGR G + EA LI+ +P+ P+A +WGALL AC+T G+ E+ + K+L+ L
Sbjct: 380 HYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREVAEIAAKELVRL 439
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
+SG YVLLSN+Y+E ++W++++K+R +M GIKK S+++
Sbjct: 440 EPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKNPGQSALQ 485
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 113/268 (42%), Gaps = 33/268 (12%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALGKKA 64
N + +NSII H ++ F M ++ ++PDN T +L + S++ D LG+
Sbjct: 71 NILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLGQCL 130
Query: 65 HDYIC-------------------------------DNNITVSVTLCNSLMNMYAKCGAL 93
H ++ D + V + N ++N + K G L
Sbjct: 131 HAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKMGDL 190
Query: 94 QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
+ + +F M Q++VVSWN++I LA EA +F +M G PD+ T +L C
Sbjct: 191 EIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVC 250
Query: 154 SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV 213
+ G V+ G + + ++ +VD + G L A + ++ K + V
Sbjct: 251 ARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEM-TKKNVVS 309
Query: 214 WGALLGACKTFGNLEMGKQILKQLLELG 241
W A++ G E+G ++ +++ G
Sbjct: 310 WNAMISGLGLNGKGELGVELFEKMARKG 337
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 196/324 (60%), Gaps = 2/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAE-AMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+P + V WN++IS Q E A+ F M G PD+ + V ++S+CS++ ++
Sbjct: 306 IPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFVCVISACSNLSSPSV 365
Query: 61 GKKAHDYICDNNITVS-VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
GK+ H ++I + V++ N+ + MY+KCG L A IF MP++N VS N +I A
Sbjct: 366 GKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYA 425
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG+ E++++FE M + P+ ITF +LSAC+H+G V+ G YF +M FGI P+
Sbjct: 426 QHGAEIESLQLFELMLQEKIVPNNITFISVLSACAHTGKVDEGEKYFNMMKEKFGIEPEA 485
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY+CM+DLLGR G L +A +I+ +P P ++ W ALLGACK GN+E+ + + L+
Sbjct: 486 EHYSCMIDLLGRAGKLNKAERIIETMPFDPGSIEWAALLGACKKHGNVELAVKAANKFLQ 545
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
L Y++ YV+LSN+Y+ + RW++ ++++M + G+KK S IEID + F+ +D
Sbjct: 546 LEPYNAAPYVMLSNVYASANRWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDT 605
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
+H I++ + +L+ LK GY
Sbjct: 606 SHPRIKEIHTYMSELLMKLKQAGY 629
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 3/205 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ VSWN++I Q + A+A+ LF M G+ D T+ S+L++ + + DLA G +
Sbjct: 206 RDMVSWNAMIVACGQHREGAKALRLFGEMERMGLEVDMFTMASVLTAFTCLKDLAGGMQF 265
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCG--ALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H + + + + + L+++Y+KC + M +F +P+ ++V WN +I + H
Sbjct: 266 HGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLECMKVFEEIPKPDLVLWNTMISGFSQHE 325
Query: 123 S-GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
++A+ F +M+ G PD+ +F ++SACS+ +G+ L + V+
Sbjct: 326 DLCEDALSSFREMQRVGFCPDDCSFVCVISACSNLSSPSVGKQVHALAIKSDIPCNRVSV 385
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLP 206
V + + G L +A + +P
Sbjct: 386 NNAFVAMYSKCGNLHDARRIFDTMP 410
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 181/286 (63%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K ++WNS+IS VQ G+ ++AMELF M + G PD T+ S+LS C +G+L +G
Sbjct: 414 MREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIG 473
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H YI NN+ V + +L++MY+KCG L A +F+ + + +WN II +L+
Sbjct: 474 ETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLY 533
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G A + K++ GL PD+ITF G+L+AC+H GLV +G YF +M+ +G+ P + H
Sbjct: 534 GLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQH 593
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YAC+V LLG+ G EA+ I K+ ++PD+ VWGALL AC +++G+ + K+L L
Sbjct: 594 YACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNACCIQREVKLGECLAKKLFLLN 653
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEI 287
+ G YVL+SN+Y+ RWDD+ ++R++M DSG C +S I++
Sbjct: 654 HKNGGFYVLMSNLYAIVGRWDDVARVREMMKDSGGDGCSGVSVIDV 699
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 8/239 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWN +I + Q G A++LF M P+ T+VS+L SC + G
Sbjct: 117 MSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQG 176
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + L N+LM+MYAKC L+ + +F M +K+VVSWN +IG +
Sbjct: 177 RSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQN 236
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +AI F++M G P +T L+SA + E Y G + D +
Sbjct: 237 GLFDKAILYFKEMLKEGFHPSSVTIMNLVSA---NAFPENVHCYV----VKCGFTNDASV 289
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+V L + GF A L + P K D + A++ + G++E + Q ++L
Sbjct: 290 VTSLVCLYAKQGFTNTAKQLYKYYPTK-DLITLTAIISSYSEKGDIESAVECFIQTIQL 347
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 105/225 (46%), Gaps = 6/225 (2%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P K+ ++ +IIS + ++G A+E F + + PD L+ +L ++ A+G
Sbjct: 314 PTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGC 373
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H Y + ++ + N L+++Y++ ++ A+ +F+ M +K +++WN +I G
Sbjct: 374 TFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAG 433
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+A+E+F +M G PD IT LLS C G + +G L S + V +
Sbjct: 434 KSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGE---TLHSYILRNNVRVEDF 490
Query: 183 --ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
++D+ + G L A + + P W A++ +G
Sbjct: 491 IGTALIDMYSKCGRLDYAEKVFYNIK-DPCLATWNAIISGYSLYG 534
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 134/318 (42%), Gaps = 42/318 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ VSWN++I + Q G +A+ F M G P + T+++++S+ A
Sbjct: 218 MDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSAN------AFP 271
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y+ T ++ SL+ +YAK G TA ++ P K++++ II + +
Sbjct: 272 ENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEK 331
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G + A+E F + + PD + G+L ++ +G + G + G+S D
Sbjct: 332 GDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKS-GLSNDCLV 390
Query: 182 YACMVDLLGR-------------------------------GGFLGEAMSLIQKLPM--- 207
++ L R G +AM L ++ M
Sbjct: 391 ANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGK 450
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKK 266
KPDA+ +LL C GNL +G+ + +L R + + L +MYS+ R D +K
Sbjct: 451 KPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEK 510
Query: 267 IRKIMNDSGIKKCRAISS 284
+ + D + AI S
Sbjct: 511 VFYNIKDPCLATWNAIIS 528
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 4/171 (2%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
SL+++Y K G A ++F M ++VVSWNV+I + +G AI++F M
Sbjct: 95 TSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFK 154
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGL-MSSTFGISPDVAHYACMVDLLGRGGFLGEAM 199
P++ T LL +C L+ GR G + + FG+ + + ++ + + L +
Sbjct: 155 PNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNN--ALMSMYAKCDDLEASQ 212
Query: 200 SLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL 250
L ++ K V W ++G G + K++L+ G + S + ++
Sbjct: 213 LLFDEMDEK-SVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIM 262
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/317 (40%), Positives = 188/317 (59%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V+W SII+ VQ G+ EA+ELF M GV P+ T+ S++ +C ++ L GK+ H
Sbjct: 199 NVVTWTSIIASCVQNGKDMEALELFRDMQADGVEPNAVTIPSLIPACGNISALTHGKEIH 258
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ I V + ++L++MYA CG ++ + + F MP +N+VSWN I+ A+HG K
Sbjct: 259 CFSLRKGIFDDVYVGSALIDMYANCGRIRLSQNCFDEMPFRNLVSWNSIMSGYAMHGKAK 318
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
E IEMF M SG PD ITFT +LSAC+ +GL E G +YF MS + + P + HYACM
Sbjct: 319 ETIEMFHMMLQSGQKPDSITFTSVLSACTQNGLTEEGWHYFNSMSKEYDVKPKMEHYACM 378
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
V LL R G L EA S+I+++P +PDA VWGALL +C+ NL +G+ ++L L +
Sbjct: 379 VTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHHNLSLGEIAAEKLFVLEPDNP 438
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
G Y+LLSN+Y+ WD+ ++R +M G++K S IEI + + DK+H
Sbjct: 439 GNYILLSNIYASKGMWDEENRVRDMMKSKGLQKNPGCSWIEIGHRVHTLVSGDKSHPQMK 498
Query: 306 SIYSMVDQLMDHLKSVG 322
I ++L +K G
Sbjct: 499 EILEKSEKLSIEIKESG 515
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 125/274 (45%), Gaps = 41/274 (14%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N VSWN +I+ G + EA+ LF M G +PD +T+ +L ++ D+ +GK+ H
Sbjct: 63 NLVSWNGMIAGFGNVGLYDEAVRLFHEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQVH 122
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGA-------------------------------LQ 94
Y+ + + ++L++MY +CG +
Sbjct: 123 GYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVD 182
Query: 95 TAMDIF----FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
TA+D+F G + NVV+W II + +G EA+E+F M+A G+ P+ +T L+
Sbjct: 183 TALDVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDMQADGVEPNAVTIPSLI 242
Query: 151 SACSHSGLVEMGR--YYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK 208
AC + + G+ + F L GI DV + ++D+ G + + + ++P +
Sbjct: 243 PACGNISALTHGKEIHCFSLRK---GIFDDVYVGSALIDMYANCGRIRLSQNCFDEMPFR 299
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
+ V W +++ G + ++ +L+ G+
Sbjct: 300 -NLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQ 332
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
+SL++MY KC + A +F GM ++V+ W+ +I + G+ A E+F +MR G+
Sbjct: 2 SSLVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVE 61
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLG--RGGFLGEA 198
P+ +++ G+++ + GL + F M S G PD + +C++ +G +G+
Sbjct: 62 PNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSE-GFLPDGSTVSCVLPGVGNLEDVLMGKQ 120
Query: 199 M-SLIQKLPMKPDAVVWGALL 218
+ + KL ++ D V ALL
Sbjct: 121 VHGYVIKLGLESDKYVVSALL 141
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSWNSI+S + G+ E +E+F M SG PD+ T S+LS+C+ G G
Sbjct: 296 MPFRNLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQKPDSITFTSVLSACTQNGLTEEG 355
Query: 62 KKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
+ + + ++ + ++ + ++ G L+ A I MP + + W ++ +
Sbjct: 356 WHYFNSMSKEYDVKPKMEHYACMVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCR 415
Query: 120 LH 121
+H
Sbjct: 416 VH 417
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 188/286 (65%), Gaps = 6/286 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLAL 60
MP ++ VSWNS+I+ + Q G+ +A++LF M S PD T+VS+ S+C H+G+L L
Sbjct: 363 MPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGL 422
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G A + +N+I +S+++ NSL++MY++CG++Q A+ IF M +++VS+N +I A
Sbjct: 423 GNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAE 482
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G E+IE+ KM+ G+ PD IT+ +L+ACSH+GL+ G+ F S F PDV
Sbjct: 483 HGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFE--SIKF---PDVD 537
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYACM+D+LGR G L EAM LIQ +PM+P A ++G+LL A +E+G+ +L ++
Sbjct: 538 HYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKV 597
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
++SG YVLLSN+Y+ + RW D K+R M G+KK +S +E
Sbjct: 598 EPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWLE 643
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 39/277 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
MP ++ VSWN+++S + Q G E + LF M G V PD T V+++SSCS +GD L
Sbjct: 226 MPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCL 285
Query: 61 GKKAHDYICDN-----NITVSVTLC------------------------------NSLMN 85
+ + D N V L N++++
Sbjct: 286 SESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMIS 345
Query: 86 MYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRAS-GLFPDEI 144
YA+ G L +A +F MPQ++ VSWN +I +G +AI++FE+M +S PDE+
Sbjct: 346 AYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEV 405
Query: 145 TFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
T + SAC H G + +G + ++ I ++ Y ++ + R G + +A+ + Q+
Sbjct: 406 TMVSVFSACGHLGELGLGNWAVSILKENH-IQISISVYNSLISMYSRCGSMQDAVLIFQE 464
Query: 205 LPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ + D V + L+ G+ ++L ++ E G
Sbjct: 465 MATR-DLVSYNTLISGFAEHGHGMESIELLLKMKEDG 500
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 38/239 (15%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP + WN +IS + + G EA LF M
Sbjct: 160 MPDRTVADWNVMISGYWKCGNEEEASTLFHVMG--------------------------- 192
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
D I+ +V +++ +AK G L+TA F MP+++VVSWN ++ A
Sbjct: 193 --------DQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQG 244
Query: 122 GSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G+ +E I +F M + G + PDE T+ ++S+CS G + + T G P+
Sbjct: 245 GAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYF 304
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKP--DAVVWGALLGACKTFGNLEMGKQILKQL 237
++D+ + G L A + ++L + +V W A++ A G+L + + ++
Sbjct: 305 VKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKM 363
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
N ++ +YAK G ++ A +F MP + V WNV+I G+ +EA +F M +
Sbjct: 138 NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEIS 197
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
+ IT+T +++ + G ++ R YF M V + M+ +GG E +
Sbjct: 198 RNVITWTTMITGHAKKGNLKTARMYFDKMPER-----SVVSWNAMLSGYAQGGAPEETIR 252
Query: 201 LIQKL----PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNM 254
L + ++PD W ++ +C + G+ + + I+++L + + +V L +M
Sbjct: 253 LFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDM 312
Query: 255 YSESQRWDDMKKIRKIMNDSGIKKCRA 281
+++ +++ KI G+ K R+
Sbjct: 313 HAKC---GNLEAAHKIFEQLGVYKYRS 336
>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14170762-14173219 | 20130731
Length = 503
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 117/322 (36%), Positives = 191/322 (59%), Gaps = 3/322 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPV++ V+WN++I +V+ + +A+ +F M + V PD T S+++ C+ +G
Sbjct: 94 MPVRDVVTWNTVIGGYVKNLRFLDALSIFRVMLKAKVEPDGFTFASVVTGCARLGSFCNA 153
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + + + ++ L +L++MYAKCG + + ++F + + +V WN +I LA+H
Sbjct: 154 KWVHGLMVEKKVELNYILTAALVDMYAKCGRVDVSKEVFECVVRDHVSVWNAMINGLAIH 213
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +A +F +M + PD +TF G+L CSH GLVE+GR YF +M + F I P + H
Sbjct: 214 GHALDATVVFSRMEVENVLPDSVTFVGILKGCSHCGLVEVGRKYFEMMQNRFFIQPQLKH 273
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y MVDLLGR G L EA S+I+ + ++PD V+W +LL AC+ G E+G+ + +
Sbjct: 274 YGTMVDLLGRAGHLEEAYSMIKAMSVEPDVVIWRSLLSACRIHGKKELGEFAIAN---IS 330
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
R +SG +VLLSNMY + W +++R +M G++K R S IE+ G +QF D++H
Sbjct: 331 RLESGDFVLLSNMYCSFKNWHGAERVRHMMKKGGVRKKRGKSWIELGGSIHQFNAADQSH 390
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+IY +++ LM K G+
Sbjct: 391 AEMKAIYRVLEGLMQRAKLEGF 412
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
N ++ K G A +F MP ++VV+WN +IG + +A+ +F M + +
Sbjct: 72 NLVIESLVKSGECDIAKKVFDKMPVRDVVTWNTVIGGYVKNLRFLDALSIFRVMLKAKVE 131
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
PD TF +++ C+ G ++ GLM + + A +VD+ + G + +
Sbjct: 132 PDGFTFASVVTGCARLGSFCNAKWVHGLMVEK-KVELNYILTAALVDMYAKCGRVDVSKE 190
Query: 201 LIQKLPMKPDAVVWGALLGACKTFGN 226
+ + + ++ VW A++ G+
Sbjct: 191 VFECV-VRDHVSVWNAMINGLAIHGH 215
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/287 (42%), Positives = 187/287 (65%), Gaps = 7/287 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS--GVMPDNATLVSILSSCSHMGDLA 59
MP ++ VSWNS+I+ + Q G+ +A++LF M S PD T+VS+ S+C H+G+L
Sbjct: 348 MPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELG 407
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
LG A + N+I +S+++ NSL+NMY++CG++Q A+ IF M +++VS+N +I A
Sbjct: 408 LGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFA 467
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG G E+IE+ KM+ G+ PD IT+ +L+ACSH+GL++ G+ F S F PDV
Sbjct: 468 EHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFE--SIKF---PDV 522
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HYACM+D+LGR G L EAM LIQ +PM+P A ++G+LL A +E+G+ +L +
Sbjct: 523 DHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFK 582
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
+ ++SG Y LLSN+Y+ + RW + K+R M G+KK +S +E
Sbjct: 583 VEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLE 629
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 40/278 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
MP ++ VSWN+++S + Q G E + LF M G V PD T +++SSCS +GD L
Sbjct: 211 MPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCL 270
Query: 61 GKKAHDYICDN-----NITVSVTLC------------------------------NSLMN 85
+ + D N V L N++++
Sbjct: 271 SESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMIS 330
Query: 86 MYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRAS--GLFPDE 143
YA+ G L +A +F MPQ++ VSWN +I +G +AI++FE+M +S PDE
Sbjct: 331 AYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDE 390
Query: 144 ITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQ 203
+T + SAC H G + +G + ++ I ++ Y ++++ R G + +A+ + Q
Sbjct: 391 VTMVSVFSACGHLGELGLGNWAVSILKVNH-IQISISVYNSLINMYSRCGSMQDAVLIFQ 449
Query: 204 KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++ + D V + L+ G+ ++L ++ E G
Sbjct: 450 EMATR-DLVSYNTLISGFAEHGHGMESIELLSKMKEDG 486
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 38/239 (15%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP + WN +IS + + G EA LF M
Sbjct: 145 MPDRTVADWNVMISGYWKCGNEEEASTLFHVMG--------------------------- 177
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
D I+ +V +++ +AK G L+TA F MP+++VVSWN ++ A
Sbjct: 178 --------DQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQG 229
Query: 122 GSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G+ +E I +F M + G + PDE T+ ++S+CS G + + G P+
Sbjct: 230 GAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYF 289
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKP--DAVVWGALLGACKTFGNLEMGKQILKQL 237
++D+ + G L A + ++L + +V W A++ A G+L K + ++
Sbjct: 290 VKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKM 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
N ++ +YAK G ++ A +F MP + V WNV+I G+ +EA +F M +
Sbjct: 123 NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEIS 182
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
+ IT+T +++ + G ++ R YF M V + M+ +GG E +
Sbjct: 183 RNVITWTTMITGHAKKGNLKTARMYFDKMPER-----SVVSWNAMLSGYAQGGAPEETIR 237
Query: 201 LIQKL----PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNM 254
L + ++PD W ++ +C + G+ + + I+++L + + +V L +M
Sbjct: 238 LFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDM 297
Query: 255 YSESQRWDDMKKIRKIMNDSGIKKCRA 281
+++ +++ KI G+ K R+
Sbjct: 298 HAKC---GNLEAAHKIFEQLGVYKYRS 321
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 193/325 (59%), Gaps = 3/325 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V WN +I + Q G E + LF RM V V P+ TL+ +LSSC +G L G+
Sbjct: 214 RDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALESGRWV 273
Query: 65 HDYIC---DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H YI D + V V + +L++MY KCG+L+ A +F + K+VV+WN +I A++
Sbjct: 274 HSYIKNGKDGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKIDGKDVVAWNSMIMGYAVN 333
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA+++F +M G+ P +TF LL+AC HSGLV G F LM + + + P V H
Sbjct: 334 GLSEEALKLFHEMHGEGVRPSYVTFIALLTACGHSGLVTKGWEMFNLMKNEYKMEPRVEH 393
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ CMV+LLGR G L EA L++ + + PD V+WG LL AC+ N+ +G++I + LL
Sbjct: 394 FGCMVNLLGRAGRLQEAYDLVRSMKIDPDPVIWGTLLWACRLHNNISLGEEIAEFLLSND 453
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
SG YVLLSN+Y+ + WD K+R +M DSG++K S IE++ ++F+ D H
Sbjct: 454 LASSGTYVLLSNIYAAAGNWDGAAKVRSLMKDSGVEKEPGCSIIEVNNRVHEFIAGDLKH 513
Query: 302 EVSTSIYSMVDQLMDHLKSVGYPCK 326
S IY M++++ LK GY K
Sbjct: 514 PKSKDIYLMLEEMNSWLKGKGYTPK 538
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 105/248 (42%), Gaps = 39/248 (15%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ +W SII H Q + +A+ + +M + P+ T S+L+ + + K
Sbjct: 85 RDVYTWTSIIHAHTQSKLNDQALSYYAQMLTHRIQPNAFTFSSLLNGST----IQPIKSI 140
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS-------------- 110
H ++ + + L++ YA+ G +A +F MP+K+++S
Sbjct: 141 HCHVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKL 200
Query: 111 ------------------WNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA 152
WNV+I A +G E + +F +M + P+ IT +LS+
Sbjct: 201 LEARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSS 260
Query: 153 CSHSGLVEMGRYYFGLMSS--TFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPD 210
C G +E GR+ + + + +V +VD+ + G L +A + K+ K D
Sbjct: 261 CGQVGALESGRWVHSYIKNGKDGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKIDGK-D 319
Query: 211 AVVWGALL 218
V W +++
Sbjct: 320 VVAWNSMI 327
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 200/322 (62%), Gaps = 1/322 (0%)
Query: 3 PVK-NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
PV+ N +SW+++IS +G+ +++ELF +M ++ VM + T+ S+LS C+ + L LG
Sbjct: 363 PVRPNVISWSAVISGFASKGRLEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLG 422
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H Y N + ++ + N L+NMY KCG + A +F + ++++SWN +IG +H
Sbjct: 423 RELHAYAIRNLMDDNILVGNGLVNMYMKCGVFEEAHLVFDNIKGRDLISWNSLIGGYGMH 482
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+ A+ F++M +GL PD+ITF +LSACSH+GLV GR F M + F I P V H
Sbjct: 483 GLGENAVRTFDEMINAGLRPDKITFVAVLSACSHAGLVAAGRNLFDRMVTEFSIEPTVEH 542
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YACMVDLLGR G L EA +++ +P++P+ VWGALL +C+ + + ++ ++I ++L L
Sbjct: 543 YACMVDLLGRAGLLQEAHDIVRNMPIEPNECVWGALLNSCRMYRDTDLIEEIESRILALK 602
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+G ++LLSN+Y++S + +D ++R + G KK S IE+ Y F + H
Sbjct: 603 SEITGSFMLLSNIYADSGKREDSARVRVSAKEKGFKKIPGQSWIEVRKKVYTFSAGNVVH 662
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
I++++++L + SV Y
Sbjct: 663 LEQDEIFAILNELALQMASVHY 684
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 87/160 (54%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WNSII +V G + A++++ +M G +PD TL I+ SCS +G + L K H ++
Sbjct: 94 WNSIIRANVSHGYYNYAVKIYHQMMKFGFLPDGFTLPLIIKSCSKIGSVGLCKIVHCHVL 153
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ V + N L+ MY K ++ A +F GM ++V+SWN ++ A + A
Sbjct: 154 ETGFKNHVHVVNELVGMYGKVRRMEDACKVFDGMVVRSVLSWNTLVSGYAFNFDYVGAFR 213
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM 169
+F++M GL P+ +T+T LLS+ + GL + F +M
Sbjct: 214 VFKRMELEGLEPNYVTWTSLLSSHARCGLFDETMELFKVM 253
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V+W S++S H + G E MELF M + G+ + +LS C+ M + GK+ H
Sbjct: 226 NYVTWTSLLSSHARCGLFDETMELFKVMRIKGIEISGEAVAVVLSVCADMDGVQRGKEIH 285
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGA-LQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
++ + + N+L+ +Y K L A IF + K++VSWN +I + A G
Sbjct: 286 GFVIKGGYEDYLFVKNALIGIYGKKREDLGDAHKIFSDIKNKSLVSWNALISSYADSGLC 345
Query: 125 KEAIEMFEKMRASG----LFPDEITFTGLLSACSHSGLVEMGRYYFGLM 169
+A E+F K+ S + P+ I+++ ++S + G +E F M
Sbjct: 346 DDAYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGRLEKSLELFRQM 394
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 194/318 (61%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ +WN++I ++ G+ EA+E+F +M G P+ T+ SIL +CS +L +GK+ H
Sbjct: 279 DEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIH 338
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
Y+ + +T +L+ MYAKCG L + ++F M +K+VV+WN +I A A+HG+GK
Sbjct: 339 CYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGK 398
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+ +F+KM S + P+ +TFTG+LS CSHS LVE G F M + PD HY+C+
Sbjct: 399 EALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCV 458
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
VD+ R G L EA IQ +PM+P A WGALL AC+ + N+E+ K K+L E+ +
Sbjct: 459 VDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNP 518
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
G YV L N+ ++ W + ++R +M + GI K S +++ + F+V DK++ S
Sbjct: 519 GNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESD 578
Query: 306 SIYSMVDQLMDHLKSVGY 323
IY+ +D+L++ +K GY
Sbjct: 579 KIYNFLDELVEKMKMAGY 596
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 155/334 (46%), Gaps = 70/334 (20%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V++ VSW S+ SC+V+ G + M++F M SGV P+ T+ SIL +C+ + DL GK+
Sbjct: 141 VRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKE 200
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS------------- 110
H + + + V++ +C++L+++YAKC +++ A +F MP ++VVS
Sbjct: 201 IHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKE 260
Query: 111 ----------------------WNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
WN +IG +G +EA+EMF KM+ G P+EIT +
Sbjct: 261 YEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISS 320
Query: 149 LLSACSHSGLVEMGR----YYF-----GLMSSTFGI---------------------SPD 178
+L ACS S + MG+ Y F G ++ST + D
Sbjct: 321 ILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKD 380
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILK 235
V + M+ G EA+ L K+ ++P++V + +L C +E G QI
Sbjct: 381 VVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFN 440
Query: 236 QLLE--LGRYDSGLYVLLSNMYSESQRWDDMKKI 267
+ L D+ Y + ++YS + R ++ K
Sbjct: 441 SMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKF 474
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 131/292 (44%), Gaps = 3/292 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + + +++IS G EA++++ + G+ PD ++ +C+ GD
Sbjct: 38 IPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRV 97
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ HD + V + N+L++ Y KC ++ A +F + ++VVSW +
Sbjct: 98 KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKC 157
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++ +++F +M SG+ P+ +T + +L AC+ ++ G+ G + G+ ++
Sbjct: 158 GFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGF-AVRHGMVVNLFV 216
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ +V L + + EA + +P + D V W +L A E G + ++ G
Sbjct: 217 CSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDG 275
Query: 242 -RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCY 292
R D + + E+ R ++ ++ + M G K S + C +
Sbjct: 276 VRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSF 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MM K+ V+WN++I + G EA+ LF +M +S V P++ T +LS CSH +
Sbjct: 375 MMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEE 434
Query: 61 GKKAHDYI-CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS-WNVIIGAL 118
G + + + D+ + + ++++Y++ G L A GMP + S W ++ A
Sbjct: 435 GVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAAC 494
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
++ + + A K+ A LF E G
Sbjct: 495 RVYKNVELA-----KISAKKLFEIEPNNPG 519
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 192/322 (59%), Gaps = 2/322 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++V WNSII+ Q EA+ L+ M G D +TL S+L +C+ L LG
Sbjct: 243 MVTGDSVVWNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSVLRACTGSSLLELG 302
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H ++ + L N+L++MY KCG+L+ A IF M K+V+SW+ +I LA +
Sbjct: 303 RQVHVHVL--KFDQDLILNNALLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQN 360
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EA+ +F+ M+ SG P+ IT G+L ACSH+GLV G YF M + +GI P H
Sbjct: 361 GFSVEALNLFDSMKVSGPRPNYITILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGREH 420
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+C++DLLGR G L E + LI ++ +PD V W LL AC+ N+++ K++L+L
Sbjct: 421 YSCLLDLLGRAGKLDEMVKLIHEMTCEPDVVTWRTLLDACRAQRNVDLATYAAKEILKLD 480
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ D+G YVLLSN+Y+ S+RWDD+ ++R+ M+ GI+K S IE++ + F+V DK+H
Sbjct: 481 QQDAGAYVLLSNIYANSKRWDDVAEVRRTMSARGIRKEPGCSWIEVNNQIHAFIVGDKSH 540
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
I +D+ + L GY
Sbjct: 541 PQIDEINRKLDEYIRKLTDAGY 562
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 149/330 (45%), Gaps = 41/330 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSW ++IS + + AM+L M GVMP+ T S+L +C + DL
Sbjct: 145 MPERNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVMPNMYTFSSVLRACERLCDL--- 201
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H I + V + ++L++ Y+K G L A+ +F M + V WN II A A H
Sbjct: 202 KQVHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFREMVTGDSVVWNSIIAAFAQH 261
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF--------------- 166
G EA+ +++ MR G D+ T T +L AC+ S L+E+GR
Sbjct: 262 SDGDEALALYKSMRREGFPADQSTLTSVLRACTGSSLLELGRQVHVHVLKFDQDLILNNA 321
Query: 167 ---------GLMSSTFGIS----PDVAHYACMVDLLGRGGFLGEAMSLIQKLPM---KPD 210
L + F S DV ++ M+ L + GF EA++L + + +P+
Sbjct: 322 LLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQNGFSVEALNLFDSMKVSGPRPN 381
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL--YVLLSNMYSESQRWDDMKK-I 267
+ +L AC G + G + + L D G Y L ++ + + D+M K I
Sbjct: 382 YITILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGREHYSCLLDLLGRAGKLDEMVKLI 441
Query: 268 RKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
++ + + R + +D C Q VD
Sbjct: 442 HEMTCEPDVVTWRTL----LDACRAQRNVD 467
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 5/196 (2%)
Query: 25 EAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLM 84
AM++ M GV D ++ C + GK+ H++I N L N+L+
Sbjct: 67 RAMQILDTMEKRGVFADAIAYSELIKCCLAHKAVREGKRVHNHIFSNGYRPKTFLINTLL 126
Query: 85 NMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEI 144
NMY K L+ A +F MP++NVVSW +I A + A+++ M G+ P+
Sbjct: 127 NMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVMPNMY 186
Query: 145 TFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
TF+ +L AC L ++ + + G++ + G+ DV + ++D + G L EA+ + ++
Sbjct: 187 TFSSVLRACER--LCDLKQVHSGILKA--GLESDVFVRSALIDAYSKLGELLEAVGVFRE 242
Query: 205 LPMKPDAVVWGALLGA 220
+ + D+VVW +++ A
Sbjct: 243 M-VTGDSVVWNSIIAA 257
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 190/323 (58%), Gaps = 4/323 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCV--SGVMPDNATLVSILSSCSHMGDLALGK 62
++ V+W +I + Q G A++LF M + ++P++ T+ +L SC+ + L GK
Sbjct: 324 RDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALNFGK 383
Query: 63 KAHDYICDNNITVSVTL--CNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H Y+ ++ S L N L++MY+K G + TA +F M ++N VSW ++ +
Sbjct: 384 QIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGM 443
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG ++A +F++MR L PD ITF +L ACSHSG+V+ G F MS FG+ P V
Sbjct: 444 HGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSHSGMVDRGINLFYRMSKDFGVDPGVE 503
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYACMVDLLGR G L EA LI + M+P VVW +LL AC+T N+E+ + K+LLEL
Sbjct: 504 HYACMVDLLGRAGRLCEATRLINDMSMEPTPVVWISLLSACRTHSNIELAEFAAKKLLEL 563
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ G Y LLSN+Y+ ++RW D+ +IR +M +GIKK S ++ F V D+
Sbjct: 564 KADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDRT 623
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H S IY + L+ +K++GY
Sbjct: 624 HSQSLKIYETLADLIQRIKAIGY 646
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 133/258 (51%), Gaps = 13/258 (5%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V+W+S+IS + Q G EAM++F +MC P+ TL+S+LS+C+ +G L GK+ H
Sbjct: 215 DVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETH 274
Query: 66 DYICD-------NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM--PQKNVVSWNVIIG 116
Y N+ T + + N+L++MYAKC +L+ A +F + ++VV+W V+IG
Sbjct: 275 CYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIG 334
Query: 117 ALALHGSGKEAIEMFEKMRA--SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
A HG A+++F +M + + P++ T + +L +C+ + G+ +
Sbjct: 335 GYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALNFGKQIHAYVLRRSL 394
Query: 175 ISPDVAHYA-CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
I DV A C++D+ + G + A + + K +AV W +LL G E ++
Sbjct: 395 IYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAVSWTSLLTGYGMHGRSEDAFRV 453
Query: 234 LKQLLELGRYDSGLYVLL 251
++ + G+ L+
Sbjct: 454 FDEMRKEALVPDGITFLV 471
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 40/231 (17%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALGKKA 64
++V+WNSI+S + A+ LF M V G++PD +V+IL C ++G G++
Sbjct: 78 DSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQV 137
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + + V + N+L++MYAKCG ++ A +F M K+VV+WN ++ + +G
Sbjct: 138 HGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRF 197
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
++A+ +F KMR + D +T++ ++S YA
Sbjct: 198 EDALSLFGKMREEKIESDVVTWSSVISG-----------------------------YA- 227
Query: 185 MVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQ 232
+ GF EAM + +++ +P+ V +LL AC + G L GK+
Sbjct: 228 ------QRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKE 272
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 40 PDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDI 99
PD+ T + +C + + LG H + +V +CN++++MY KC A+ A +
Sbjct: 8 PDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKV 67
Query: 100 FFGMPQKNV---VSWNVIIGALALHGSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSH 155
F + + + V+WN I+ + A+ +F +M G+ PD + +L C +
Sbjct: 68 FDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGY 127
Query: 156 SGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWG 215
GL GR G + G+ DV +VD+ + G + +A + +++ K D V W
Sbjct: 128 LGLGLCGRQVHGFCVRS-GLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFK-DVVTWN 185
Query: 216 ALLGACKTFGNLEMGKQILKQLLE 239
A++ G E + ++ E
Sbjct: 186 AMVTGYSQNGRFEDALSLFGKMRE 209
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 189/321 (58%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P K V+WN++IS + Q G A+ LF M + P+ T+ +ILS+C+ +G L+ GK
Sbjct: 372 PEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGK 431
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H I N+ ++ + +L++MYAKCG + A +F M +KN V+WN +I LHG
Sbjct: 432 WVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHG 491
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
G EA++++ +M G P +TF +L ACSH+GLV G F M + + I P + HY
Sbjct: 492 YGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHY 551
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
ACMVD+LGR G L +A+ I+K+P++P VWG LLGAC + ++ + ++L EL
Sbjct: 552 ACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDP 611
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHE 302
G YVLLSN+YS + + IR+++ + K + IE++G + F+ D++H
Sbjct: 612 GSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHS 671
Query: 303 VSTSIYSMVDQLMDHLKSVGY 323
+T IY+ +++L ++ +GY
Sbjct: 672 HATDIYAKLEKLTGKMREMGY 692
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 121/249 (48%), Gaps = 3/249 (1%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
+++N++IS G +++LF + SG ++T+V ++ S G L L H +
Sbjct: 276 IAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGF 335
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ I ++ T+ + +Y K + A +F P+K VV+WN +I +GS + A
Sbjct: 336 CVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETA 395
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
I +F++M + P+ +T T +LSAC+ G + G++ L+ S + P++ +VD
Sbjct: 396 ISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSE-NLEPNIYVSTALVD 454
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
+ + G + EA L + K + V W ++ G ++ ++L LG Y+
Sbjct: 455 MYAKCGNISEAWQLFDSMSEK-NTVTWNTMIFGYGLHGYGHEALKLYNEMLHLG-YNPSA 512
Query: 248 YVLLSNMYS 256
LS +Y+
Sbjct: 513 VTFLSVLYA 521
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 138/306 (45%), Gaps = 54/306 (17%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ V WN++I+ V+ ++++LF M GV D++T+ ++L + + + +L +G
Sbjct: 169 MPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVG 228
Query: 62 K-------KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVI 114
K CD +T L+++Y+KCG + TA +F + + +++++N +
Sbjct: 229 MGIQCLALKIGFGFCDYVLT-------GLISLYSKCGDVNTARLLFRRINRPDLIAYNAM 281
Query: 115 IGALALHGSGKEAIEMFEKMRAS----------GLFPDEITFTGLLSACSHSGL-VEMGR 163
I +G + ++++F ++ S GL P F L ACS G V+ G
Sbjct: 282 ISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGI 341
Query: 164 YYFGLMSSTFGI-----------------SPD--VAHYACMVDLLGRGGFLGEAMSLIQ- 203
+S+ F SP+ V + M+ + G A+SL +
Sbjct: 342 ILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKE 401
Query: 204 --KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSE-- 257
K P+AV +L AC G+L GK + L++ + +YV L +MY++
Sbjct: 402 MMKTEFTPNAVTITTILSACAQLGSLSFGKWV-HHLIKSENLEPNIYVSTALVDMYAKCG 460
Query: 258 --SQRW 261
S+ W
Sbjct: 461 NISEAW 466
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 107/224 (47%), Gaps = 10/224 (4%)
Query: 36 SGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQT 95
+ + PDN T +++CS+ L L AH I + +V + ++L+++Y K +
Sbjct: 105 TNLSPDNFTYAFAVAACSNDKHLML-LHAHSII--DGYGSNVFVGSALVDLYCKFSRVVY 161
Query: 96 AMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH 155
A +F GMP+++ V WN +I L + ++I++F +M A G+ D T T +L A +
Sbjct: 162 ARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAE 221
Query: 156 SGLVEMGRYYFGLMSSTFGISPDVAHYAC--MVDLLGRGGFLGEAMSLIQKLPMKPDAVV 213
+++G G+ I Y ++ L + G + A L +++ +PD +
Sbjct: 222 LQELKVG---MGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRIN-RPDLIA 277
Query: 214 WGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYS 256
+ A++ G E ++ ++LL G R S V L ++S
Sbjct: 278 YNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHS 321
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN V+WN++I + G EA++L+ M G P T +S+L +CSH G + G
Sbjct: 472 MSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEG 531
Query: 62 KKA-HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
++ H+ + I + ++++ + G L+ A++ MP + W ++GA
Sbjct: 532 EEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACM 591
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLS 151
+H I R L P + + LLS
Sbjct: 592 IHKDTD--IARLASERLFELDPGSVGYYVLLS 621
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 244 bits (624), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 183/297 (61%), Gaps = 9/297 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP KN +SWNS+I+ + + + A+ELF +M + G PD TL SILS + + DL LG
Sbjct: 291 MPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLG 350
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALAL 120
K+ H ++ + + + NSL+ MY++CG + A +F M K+V++WN +IG A
Sbjct: 351 KQIHQFVT-KTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAF 409
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG +A+E+FE+M+ + P ITF +L+AC+H+GLVE G+ F M + +GI P V
Sbjct: 410 HGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVE 469
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
H+A +VD+LGR G L EAM LI +P+KPD VWGALLGAC+ N+++ + K L+ L
Sbjct: 470 HFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRL 529
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK-------CRAISSIEIDGC 290
S Y LL N+Y++ +WDD +++R +M ++ +KK C+ + DGC
Sbjct: 530 EPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGSICRCQQQGTPAFDGC 586
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 113/218 (51%), Gaps = 14/218 (6%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N VSWNS++ C+V+ G A ELF RM V D + +++ +GD+ ++A
Sbjct: 201 RNVVSWNSMMMCYVKAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDM---EEA 253
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
+ I V NS+++ +++ G L+ + F MP KN++SWN +I +
Sbjct: 254 SKLFLEMPIP-DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDY 312
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE--MGRYYFGLMSSTFGISPDVAHY 182
K AIE+F +M+ G PD T + +LS +GLV+ +G+ ++ T + PD+
Sbjct: 313 KGAIELFSQMQLKGERPDRHTLSSILSVS--TGLVDLYLGKQIHQFVTKT--VVPDLPIN 368
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
++ + R G +G+A + ++ + D + W A++G
Sbjct: 369 NSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGG 406
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 109/240 (45%), Gaps = 22/240 (9%)
Query: 13 IISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNN 72
+I+ +VQ + A+A +LF M + ++ N ++S SC + G+K D + +
Sbjct: 1 MITGYVQRREIAKARQLFDEMPLRDIVSWN-LIISGYFSCRGSRFVEEGRKLFDIMPQRD 59
Query: 73 ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFE 132
N++++ YAK G + A++IF MP++NVVS N ++ L+G A+ F
Sbjct: 60 CVS----WNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFR 115
Query: 133 KMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH-YACMVDLLGR 191
KM D + +GL+S +G ++M + D+ + Y ++ G+
Sbjct: 116 KMGER----DSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQ 171
Query: 192 GGFLGEAMSLIQ------------KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
G + EA + K +K + V W +++ G++ +++ +++E
Sbjct: 172 RGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVE 231
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 244 bits (623), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 194/331 (58%), Gaps = 8/331 (2%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M K+ SWNSIIS H + G H ++LF RM + V PD T+ ++L +C+H+ L
Sbjct: 294 VMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACTHLAALMH 353
Query: 61 GKKAHDYIC--------DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWN 112
G++ H Y+ NN V L N+LM+MYAKCG+++ A +F M +K+V SWN
Sbjct: 354 GREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMRDARMVFDNMTEKDVASWN 413
Query: 113 VIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST 172
++I +HG G EA++ F +MR + L P+EI+F GLLSACSH+G+V+ G + M S
Sbjct: 414 IMITGYGMHGYGDEALDTFTRMRQAQLVPNEISFVGLLSACSHAGMVKEGLEFLAEMDSK 473
Query: 173 FGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
+G+ P V HY C++D+L R G L EA L+ +P K D V W ALL AC+ + + ++ +
Sbjct: 474 YGVPPSVEHYTCVIDMLCRAGKLVEAYDLMLTMPFKADPVGWRALLAACRIYKDTDLAEI 533
Query: 233 ILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCY 292
+++EL G YVL+SN+Y R++ + ++R M +KK S IE+ +
Sbjct: 534 AASKVIELEPGHCGNYVLMSNVYGVVGRYEQVSELRHTMRQQNVKKRPGCSWIELMNGVH 593
Query: 293 QFMVDDKNHEVSTSIYSMVDQLMDHLKSVGY 323
F+ D+ H + IY+ ++ L L+ GY
Sbjct: 594 VFLTGDRTHPQTDFIYAGLNSLTAVLQEQGY 624
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 41/277 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+PV++ V WNS+++ + Q G EA+ +F RM +GV+P T+ +LS S +GD G
Sbjct: 194 LPVRDVVLWNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNG 253
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H ++ SV + N+L++MY KC A+++F M +K++ SWN II
Sbjct: 254 QAVHGFLTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEVMDEKDMFSWNSIISVHQRC 313
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM----------SS 171
G +++F++M + + PD +T T +L AC+H + GR G M ++
Sbjct: 314 GDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACTHLAALMHGREIHGYMIVNGLGKEGRNN 373
Query: 172 TFG----------------------------ISPDVAHYACMVDLLGRGGFLGEAMSLIQ 203
F DVA + M+ G G+ EA+
Sbjct: 374 DFDDVLLNNALMDMYAKCGSMRDARMVFDNMTEKDVASWNIMITGYGMHGYGDEALDTFT 433
Query: 204 KL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++ + P+ + + LL AC G ++ G + L ++
Sbjct: 434 RMRQAQLVPNEISFVGLLSACSHAGMVKEGLEFLAEM 470
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 117/235 (49%), Gaps = 7/235 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV-MPDNATLVSILSSCSHMGDLALGKK 63
KN ++N+II+ V G + L+ +M + GV +PD T ++ +C GD+ KK
Sbjct: 95 KNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEVKK 154
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + + + V + ++L+ Y K + A ++F +P ++VV WN ++ A G
Sbjct: 155 IHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYAQIGC 214
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+EA+ MF +M +G+ P T TG+LS S G + G+ G ++ G V
Sbjct: 215 FEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTK-MGYHSSVVVLN 273
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKT----FGNLEMGKQIL 234
++D+ G+ +A+++ + + K D W +++ + +G L++ ++L
Sbjct: 274 ALIDMYGKCKCASDALNVFEVMDEK-DMFSWNSIISVHQRCGDHYGTLKLFDRML 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 7/205 (3%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF 100
D T ++ L C+ +L GK+ H ++ N S S++NMY+KC + A+ +
Sbjct: 28 DIGTCITSLQQCAQTTNLTKGKQLHTHLLKNGFFASPLAITSIINMYSKCTLINYALKV- 86
Query: 101 FGMP---QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHS 156
F P KNV ++N II +G + + ++++MR G + PD+ TF ++ AC +
Sbjct: 87 FNYPTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDA 146
Query: 157 GLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGA 216
G V + GL+ FG+ DV + +V + + +A + ++LP++ D V+W +
Sbjct: 147 GDVFEVKKIHGLLFK-FGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVR-DVVLWNS 204
Query: 217 LLGACKTFGNLEMGKQILKQLLELG 241
++ G E + ++++E G
Sbjct: 205 MVNGYAQIGCFEEALGMFRRMVENG 229
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 244 bits (623), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 195/325 (60%), Gaps = 1/325 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP VSWN +IS +V EG+ +A+ LF M S V PD T S+L++CS + L
Sbjct: 368 LMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEK 427
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ H+ I + N+ + + +L++MYAKCGA++ A +F +P++++VSW +I A
Sbjct: 428 GREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGS 487
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG EA+E+F +M S + PD +TF +LSACSH+GLV+ G Y+F M + +GI P +
Sbjct: 488 HGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIE 547
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLP-MKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY+C++ LLGR G L EA ++Q P + D + L AC+ NL++G +I + L++
Sbjct: 548 HYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLID 607
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
DS Y++LSNMY+ +WD+++ +R M D G+KK S IEI+ F V+D
Sbjct: 608 KDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDN 667
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGYP 324
+H I +++ L H++ P
Sbjct: 668 SHYHLEGIGNILSYLTSHMEDECKP 692
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 135/272 (49%), Gaps = 35/272 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ WN++ISC+ Q G+ EA+ F M G PD+ T+ + +SSC+ + DL G
Sbjct: 167 MPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRG 226
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + ++ + + +L++MY KCG L+ A+++F MP K VV+WN +I
Sbjct: 227 REIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFK 286
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G I++F++M + G+ P T T L ACS S + G++ G + I PD+
Sbjct: 287 GDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRN-RIQPDIFL 345
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLP----------------------------------M 207
+ ++DL + G + A ++ + +P +
Sbjct: 346 NSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFV 405
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+PDA+ + ++L AC LE G++I ++E
Sbjct: 406 EPDAITFTSVLAACSQLAALEKGREIHNLIVE 437
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 126/238 (52%), Gaps = 2/238 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K V+WNS+I+ + +G ++LF RM GV P TL S L +CS L G
Sbjct: 268 MPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEG 327
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H YI N I + L +SLM++Y KCG +++A IF MP+ VSWNV+I
Sbjct: 328 KFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTE 387
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +A+ +F +M S + PD ITFT +L+ACS +E GR L+ + +
Sbjct: 388 GKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVER-NLGNNEVV 446
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D+ + G + EA + + LP + D V W +++ A + G + ++ ++L+
Sbjct: 447 MGALLDMYAKCGAVEEAFGVFKCLPER-DLVSWTSMITAYGSHGRVYEALELFAEMLQ 503
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 113/210 (53%), Gaps = 5/210 (2%)
Query: 11 NSIISCHVQEGQHAEAMELFCR-MCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
N +++ + + + EA+ LF + MC + PD+ T S+L +C + + LG+ H +
Sbjct: 74 NGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLV 133
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ V + + +SL+ MYAKC + A+ +F MP K+V WN +I G +EA+
Sbjct: 134 KEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALR 193
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR-YYFGLMSSTFGISPDVAHYACMVDL 188
F MR G PD +T T +S+C+ ++ GR + L++S F + V+ A +VD+
Sbjct: 194 YFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVS--AALVDM 251
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
G+ G L A+ + +++P K V W +++
Sbjct: 252 YGKCGQLEMAIEVFEQMPNKT-VVAWNSMI 280
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 244 bits (623), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 195/325 (60%), Gaps = 1/325 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP VSWN +IS +V EG+ +A+ LF M S V PD T S+L++CS + L
Sbjct: 368 LMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEK 427
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ H+ I + N+ + + +L++MYAKCGA++ A +F +P++++VSW +I A
Sbjct: 428 GREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGS 487
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG EA+E+F +M S + PD +TF +LSACSH+GLV+ G Y+F M + +GI P +
Sbjct: 488 HGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIE 547
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLP-MKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY+C++ LLGR G L EA ++Q P + D + L AC+ NL++G +I + L++
Sbjct: 548 HYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLID 607
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
DS Y++LSNMY+ +WD+++ +R M D G+KK S IEI+ F V+D
Sbjct: 608 KDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDN 667
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGYP 324
+H I +++ L H++ P
Sbjct: 668 SHYHLEGIGNILSYLTSHMEDECKP 692
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 135/272 (49%), Gaps = 35/272 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ WN++ISC+ Q G+ EA+ F M G PD+ T+ + +SSC+ + DL G
Sbjct: 167 MPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRG 226
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + ++ + + +L++MY KCG L+ A+++F MP K VV+WN +I
Sbjct: 227 REIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFK 286
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G I++F++M + G+ P T T L ACS S + G++ G + I PD+
Sbjct: 287 GDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRN-RIQPDIFL 345
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLP----------------------------------M 207
+ ++DL + G + A ++ + +P +
Sbjct: 346 NSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFV 405
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+PDA+ + ++L AC LE G++I ++E
Sbjct: 406 EPDAITFTSVLAACSQLAALEKGREIHNLIVE 437
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 126/238 (52%), Gaps = 2/238 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K V+WNS+I+ + +G ++LF RM GV P TL S L +CS L G
Sbjct: 268 MPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEG 327
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H YI N I + L +SLM++Y KCG +++A IF MP+ VSWNV+I
Sbjct: 328 KFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTE 387
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +A+ +F +M S + PD ITFT +L+ACS +E GR L+ + +
Sbjct: 388 GKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVER-NLGNNEVV 446
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D+ + G + EA + + LP + D V W +++ A + G + ++ ++L+
Sbjct: 447 MGALLDMYAKCGAVEEAFGVFKCLPER-DLVSWTSMITAYGSHGRVYEALELFAEMLQ 503
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 113/210 (53%), Gaps = 5/210 (2%)
Query: 11 NSIISCHVQEGQHAEAMELFCR-MCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
N +++ + + + EA+ LF + MC + PD+ T S+L +C + + LG+ H +
Sbjct: 74 NGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLV 133
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ V + + +SL+ MYAKC + A+ +F MP K+V WN +I G +EA+
Sbjct: 134 KEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALR 193
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR-YYFGLMSSTFGISPDVAHYACMVDL 188
F MR G PD +T T +S+C+ ++ GR + L++S F + V+ A +VD+
Sbjct: 194 YFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVS--AALVDM 251
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
G+ G L A+ + +++P K V W +++
Sbjct: 252 YGKCGQLEMAIEVFEQMPNKT-VVAWNSMI 280
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 244 bits (623), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 190/329 (57%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP N VSWN++I VQ EA++L M G+ D T+V I S+C ++G L L
Sbjct: 426 MPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLA 485
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K + YI N+I + + L +L++M+++CG AM +F M +++V +W I A+
Sbjct: 486 KWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVE 545
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ K AIE+F++M + D+ F LL+A SH G V+ GR F M G+SP + H
Sbjct: 546 GNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVH 605
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDLLGR G L EA L++ +P+KP+ V+WG+ L AC+ N+E +++ +L
Sbjct: 606 YGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLA 665
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
G++VLLSN+Y+ + +W+D+ ++R M + G +K SSIE+ G +F D++H
Sbjct: 666 PEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESH 725
Query: 302 EVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
+ I M+ ++ + VGY ++V
Sbjct: 726 TENAQIGLMLQEINCRISQVGYVPDTTNV 754
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 144/298 (48%), Gaps = 40/298 (13%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN V +N+I+S +VQ G E + + M G PD T++S +++C+ +GDL++GK +
Sbjct: 297 KNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSS 356
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGA-------------------------------L 93
H Y+ N + + N++++MY KCG L
Sbjct: 357 HAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGEL 416
Query: 94 QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
+ A+ IF MP+ N+VSWN +IGA+ +EAI++ +M+ G+ D +T G+ SAC
Sbjct: 417 ELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASAC 476
Query: 154 SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV 213
+ G +++ ++ + + I D+ +VD+ R G AM + + + K D
Sbjct: 477 GYLGALDLAKWIYTYIEKN-DIHIDMQLGTALVDMFSRCGDPLNAMRVFENME-KRDVSA 534
Query: 214 WGALLGACKTFGN----LEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKI 267
W A + GN +E+ ++LKQ + + D ++V L +S D +++
Sbjct: 535 WTAAIRVKAVEGNAKGAIELFDEMLKQDV---KADDFVFVALLTAFSHGGYVDQGRQL 589
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 2/235 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N VSW S+I+ + EA+ LF M GV P+ T+V +S+C+ + DL LGKK
Sbjct: 196 RNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKV 255
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
+ + + + + + N+L++MY KCG + +IF KN+V +N I+ HG
Sbjct: 256 CNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLA 315
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
E + + ++M G PD++T ++AC+ G + +G+ + G+
Sbjct: 316 GEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRN-GLERLDNISNA 374
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D+ + G A + + K V W +L+ G LE+ +I ++ E
Sbjct: 375 IIDMYMKCGKREAACKVFDSMSNKT-VVTWNSLIAGLVRDGELELALRIFGEMPE 428
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 36/256 (14%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
N++I + G EA+ ++ M V G++PDN T +LS+CS + + G + H +
Sbjct: 100 NTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVV 159
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + + NSL++ YA CG + +F M ++NVVSW +I ++ KEA+
Sbjct: 160 KMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVC 219
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLL 189
+F +M G+ P+ +T +SAC+ +E+G+ LM+ G+ + ++D+
Sbjct: 220 LFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTE-LGVKSNTLVVNALLDMY 278
Query: 190 GR-------------------------------GGFLGEAMSLIQKLPMK---PDAVVWG 215
+ G GE + ++ ++ K PD V
Sbjct: 279 MKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTML 338
Query: 216 ALLGACKTFGNLEMGK 231
+ + AC G+L +GK
Sbjct: 339 STIAACAQLGDLSVGK 354
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 180/286 (62%), Gaps = 2/286 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP KN +SWNS+I+ + + + A+ELF +M + G PD TL SILS + + DL LG
Sbjct: 365 MPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLG 424
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALAL 120
K+ H ++ + + + NSL+ MY++CG + A +F M K+V++WN +IG A
Sbjct: 425 KQIHQFVT-KTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAF 483
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG +A+E+FE+M+ + P ITF +L+AC+H+GLVE G+ F M + +GI P V
Sbjct: 484 HGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVE 543
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
H+A +VD+LGR G L EAM LI +P+KPD VWGALLGAC+ N+++ + K L+ L
Sbjct: 544 HFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRL 603
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
S Y LL N+Y++ +WDD +++R +M ++ +KK S I+
Sbjct: 604 EPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWID 649
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 114/223 (51%), Gaps = 14/223 (6%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N VSWNS++ C+V+ G A ELF RM V D + +++ +GD+ ++A
Sbjct: 275 RNVVSWNSMMMCYVKAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDM---EEA 327
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
+ I V NS+++ +++ G L+ + F MP KN++SWN +I +
Sbjct: 328 SKLFLEMPIP-DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDY 386
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE--MGRYYFGLMSSTFGISPDVAHY 182
K AIE+F +M+ G PD T + +LS +GLV+ +G+ ++ T + PD+
Sbjct: 387 KGAIELFSQMQLKGERPDRHTLSSILSVS--TGLVDLYLGKQIHQFVTKT--VVPDLPIN 442
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
++ + R G +G+A + ++ + D + W A++G G
Sbjct: 443 NSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHG 485
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 116/248 (46%), Gaps = 22/248 (8%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N V+WNS+I+ +VQ + A+A +LF M + ++ N ++S SC + G+K
Sbjct: 67 RNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWN-LIISGYFSCRGSRFVEEGRKL 125
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
D + + N++++ YAK G + A++IF MP++NVVS N ++ L+G
Sbjct: 126 FDIMPQRDCVS----WNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDV 181
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH-YA 183
A+ F KM D + +GL+S +G ++M + D+ + Y
Sbjct: 182 DSAVGFFRKMGER----DSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYN 237
Query: 184 CMVDLLGRGGFLGEAMSLIQ------------KLPMKPDAVVWGALLGACKTFGNLEMGK 231
++ G+ G + EA + K +K + V W +++ G++ +
Sbjct: 238 TLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSAR 297
Query: 232 QILKQLLE 239
++ +++E
Sbjct: 298 ELFDRMVE 305
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 180/286 (62%), Gaps = 2/286 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP KN +SWNS+I+ + + + A+ELF +M + G PD TL SILS + + DL LG
Sbjct: 365 MPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLG 424
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALAL 120
K+ H ++ + + + NSL+ MY++CG + A +F M K+V++WN +IG A
Sbjct: 425 KQIHQFVT-KTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAF 483
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG +A+E+FE+M+ + P ITF +L+AC+H+GLVE G+ F M + +GI P V
Sbjct: 484 HGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVE 543
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
H+A +VD+LGR G L EAM LI +P+KPD VWGALLGAC+ N+++ + K L+ L
Sbjct: 544 HFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRL 603
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
S Y LL N+Y++ +WDD +++R +M ++ +KK S I+
Sbjct: 604 EPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWID 649
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 114/223 (51%), Gaps = 14/223 (6%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N VSWNS++ C+V+ G A ELF RM V D + +++ +GD+ ++A
Sbjct: 275 RNVVSWNSMMMCYVKAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDM---EEA 327
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
+ I V NS+++ +++ G L+ + F MP KN++SWN +I +
Sbjct: 328 SKLFLEMPIP-DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDY 386
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE--MGRYYFGLMSSTFGISPDVAHY 182
K AIE+F +M+ G PD T + +LS +GLV+ +G+ ++ T + PD+
Sbjct: 387 KGAIELFSQMQLKGERPDRHTLSSILSVS--TGLVDLYLGKQIHQFVTKT--VVPDLPIN 442
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
++ + R G +G+A + ++ + D + W A++G G
Sbjct: 443 NSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHG 485
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 116/248 (46%), Gaps = 22/248 (8%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N V+WNS+I+ +VQ + A+A +LF M + ++ N ++S SC + G+K
Sbjct: 67 RNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWN-LIISGYFSCRGSRFVEEGRKL 125
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
D + + N++++ YAK G + A++IF MP++NVVS N ++ L+G
Sbjct: 126 FDIMPQRDCVS----WNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDV 181
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH-YA 183
A+ F KM D + +GL+S +G ++M + D+ + Y
Sbjct: 182 DSAVGFFRKMGER----DSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYN 237
Query: 184 CMVDLLGRGGFLGEAMSLIQ------------KLPMKPDAVVWGALLGACKTFGNLEMGK 231
++ G+ G + EA + K +K + V W +++ G++ +
Sbjct: 238 TLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSAR 297
Query: 232 QILKQLLE 239
++ +++E
Sbjct: 298 ELFDRMVE 305
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 180/286 (62%), Gaps = 2/286 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP KN +SWNS+I+ + + + A+ELF +M + G PD TL SILS + + DL LG
Sbjct: 365 MPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLG 424
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALAL 120
K+ H ++ + + + NSL+ MY++CG + A +F M K+V++WN +IG A
Sbjct: 425 KQIHQFVT-KTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAF 483
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG +A+E+FE+M+ + P ITF +L+AC+H+GLVE G+ F M + +GI P V
Sbjct: 484 HGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVE 543
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
H+A +VD+LGR G L EAM LI +P+KPD VWGALLGAC+ N+++ + K L+ L
Sbjct: 544 HFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRL 603
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
S Y LL N+Y++ +WDD +++R +M ++ +KK S I+
Sbjct: 604 EPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWID 649
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 114/223 (51%), Gaps = 14/223 (6%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N VSWNS++ C+V+ G A ELF RM V D + +++ +GD+ ++A
Sbjct: 275 RNVVSWNSMMMCYVKAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDM---EEA 327
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
+ I V NS+++ +++ G L+ + F MP KN++SWN +I +
Sbjct: 328 SKLFLEMPIP-DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDY 386
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE--MGRYYFGLMSSTFGISPDVAHY 182
K AIE+F +M+ G PD T + +LS +GLV+ +G+ ++ T + PD+
Sbjct: 387 KGAIELFSQMQLKGERPDRHTLSSILSVS--TGLVDLYLGKQIHQFVTKT--VVPDLPIN 442
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
++ + R G +G+A + ++ + D + W A++G G
Sbjct: 443 NSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHG 485
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 116/248 (46%), Gaps = 22/248 (8%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N V+WNS+I+ +VQ + A+A +LF M + ++ N ++S SC + G+K
Sbjct: 67 RNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWN-LIISGYFSCRGSRFVEEGRKL 125
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
D + + N++++ YAK G + A++IF MP++NVVS N ++ L+G
Sbjct: 126 FDIMPQRDCVS----WNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDV 181
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH-YA 183
A+ F KM D + +GL+S +G ++M + D+ + Y
Sbjct: 182 DSAVGFFRKMGER----DSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYN 237
Query: 184 CMVDLLGRGGFLGEAMSLIQ------------KLPMKPDAVVWGALLGACKTFGNLEMGK 231
++ G+ G + EA + K +K + V W +++ G++ +
Sbjct: 238 TLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSAR 297
Query: 232 QILKQLLE 239
++ +++E
Sbjct: 298 ELFDRMVE 305
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 180/286 (62%), Gaps = 2/286 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP KN +SWNS+I+ + + + A+ELF +M + G PD TL SILS + + DL LG
Sbjct: 365 MPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLG 424
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALAL 120
K+ H ++ + + + NSL+ MY++CG + A +F M K+V++WN +IG A
Sbjct: 425 KQIHQFVT-KTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAF 483
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG +A+E+FE+M+ + P ITF +L+AC+H+GLVE G+ F M + +GI P V
Sbjct: 484 HGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVE 543
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
H+A +VD+LGR G L EAM LI +P+KPD VWGALLGAC+ N+++ + K L+ L
Sbjct: 544 HFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRL 603
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
S Y LL N+Y++ +WDD +++R +M ++ +KK S I+
Sbjct: 604 EPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWID 649
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 114/223 (51%), Gaps = 14/223 (6%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N VSWNS++ C+V+ G A ELF RM V D + +++ +GD+ ++A
Sbjct: 275 RNVVSWNSMMMCYVKAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDM---EEA 327
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
+ I V NS+++ +++ G L+ + F MP KN++SWN +I +
Sbjct: 328 SKLFLEMPIP-DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDY 386
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE--MGRYYFGLMSSTFGISPDVAHY 182
K AIE+F +M+ G PD T + +LS +GLV+ +G+ ++ T + PD+
Sbjct: 387 KGAIELFSQMQLKGERPDRHTLSSILSVS--TGLVDLYLGKQIHQFVTKT--VVPDLPIN 442
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
++ + R G +G+A + ++ + D + W A++G G
Sbjct: 443 NSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHG 485
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 116/248 (46%), Gaps = 22/248 (8%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N V+WNS+I+ +VQ + A+A +LF M + ++ N ++S SC + G+K
Sbjct: 67 RNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWN-LIISGYFSCRGSRFVEEGRKL 125
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
D + + N++++ YAK G + A++IF MP++NVVS N ++ L+G
Sbjct: 126 FDIMPQRDCVS----WNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDV 181
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH-YA 183
A+ F KM D + +GL+S +G ++M + D+ + Y
Sbjct: 182 DSAVGFFRKMGER----DSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYN 237
Query: 184 CMVDLLGRGGFLGEAMSLIQ------------KLPMKPDAVVWGALLGACKTFGNLEMGK 231
++ G+ G + EA + K +K + V W +++ G++ +
Sbjct: 238 TLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSAR 297
Query: 232 QILKQLLE 239
++ +++E
Sbjct: 298 ELFDRMVE 305
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 189/299 (63%), Gaps = 3/299 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P ++ V W ++I+ +VQ + EA+ LF M V GV PD +V++L+ C+ +G L G+
Sbjct: 298 PTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHGR 357
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
HDY+ +N I V + SL+ MYAKCG ++ ++++F G+ +K+ SW II LA++G
Sbjct: 358 WIHDYVRENRIVVDAVVGTSLIEMYAKCGCVEKSLEVFNGLKEKDTASWTSIICGLAMNG 417
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
EA+E+FE+M+ G PD++TF LL+ACSH GLVE G F MS +GI P++ HY
Sbjct: 418 KTIEALELFEEMKIFGAKPDDVTFIVLLNACSHGGLVEEGHKLFHSMSCIYGIEPNLEHY 477
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPD---AVVWGALLGACKTFGNLEMGKQILKQLLE 239
C +DLLGR G L EA LI+KLP + + ++G+ L AC+T+GN +MG++I L +
Sbjct: 478 GCFIDLLGRAGLLHEAEELIKKLPDQKNETIVAIYGSFLSACRTYGNTDMGERIATALEK 537
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
+ DS L+ LL+++Y+ + RW+D K R M D I+K S+IE+DG Q V D
Sbjct: 538 VKSSDSSLHSLLASIYASADRWEDASKTRSKMKDLHIRKVPGCSAIEVDGSGNQGGVGD 596
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 133/298 (44%), Gaps = 65/298 (21%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLALGKK 63
+++VSWN +IS V+ + EA+E+F RM V S AT+VS L++C+ ++ +GK+
Sbjct: 167 RDSVSWNVMISGCVKCRRFEEAVEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKE 226
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM-------------------- 103
H +I + + ++ + N+L++MY KCG + A +IF GM
Sbjct: 227 IHGFIIEKELDFTMRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGE 286
Query: 104 -----------PQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA 152
P ++VV W +I EA+ +FE+M+ G+ PD+ LL+
Sbjct: 287 LDKARDLFDKSPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTC 346
Query: 153 CSHSGLVEMGRYYFG-------LMSSTFGIS-----------------------PDVAHY 182
C+ G +E GR+ ++ + G S D A +
Sbjct: 347 CAQLGTLEHGRWIHDYVRENRIVVDAVVGTSLIEMYAKCGCVEKSLEVFNGLKEKDTASW 406
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPM---KPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++ L G EA+ L +++ + KPD V + LL AC G +E G ++ +
Sbjct: 407 TSIICGLAMNGKTIEALELFEEMKIFGAKPDDVTFIVLLNACSHGGLVEEGHKLFHSM 464
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 134/286 (46%), Gaps = 9/286 (3%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
+N +I + + LF ++ ++G+ PDN T +L + + + D G K H ++
Sbjct: 71 YNLLIKSFFKRNSFQTLISLFNQLRLNGLYPDNYTYPFVLKAVAFIADFRQGTKIHAFVF 130
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + NS M+MYA+ G + +F + +++ VSWNV+I +EA+E
Sbjct: 131 KTGLDSDYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCVKCRRFEEAVE 190
Query: 130 MFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDVAHYACMVD 187
+F++MR S E T L+AC+ S VE+G+ G ++ + + + ++D
Sbjct: 191 VFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIHGFIIEKELDFTMRMGN--ALLD 248
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
+ + G++ A + + ++ + W +++ + G L+ + + + D L
Sbjct: 249 MYCKCGYVSVAREIFDGM-IEKNVNCWTSMVTGYVSCGELDKARDLFDK---SPTRDVVL 304
Query: 248 YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQ 293
+ + N Y + R+D+ + + M G+K + I + + CC Q
Sbjct: 305 WTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFI-VVALLTCCAQ 349
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 175/277 (63%), Gaps = 2/277 (0%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
SWN++IS Q G +A+ +F M G PD T+VS++S+C +GDL L + H Y+
Sbjct: 165 SWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYV 224
Query: 69 --CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
N + + NSL++MY KCG + A ++F M +NV SW +I A+HG KE
Sbjct: 225 FQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKE 284
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMV 186
A+ F MR SG+ P+ +TF G+LSAC H G V+ GR+YF +M + +GI+P + HY CMV
Sbjct: 285 ALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMV 344
Query: 187 DLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSG 246
DLLGR G +A +++++PMKP++VVWG L+GAC+ GN++M + + + L L ++ G
Sbjct: 345 DLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWNEG 404
Query: 247 LYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAIS 283
+YV+LSN+Y+ W ++++IR M + + K A S
Sbjct: 405 VYVVLSNIYANKGLWKEVERIRSFMKEGRLAKIPAYS 441
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 7/191 (3%)
Query: 7 AVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHD 66
+ +WN+II + + A+ ++ M +GV+PD TL +L + S + LG++ H
Sbjct: 62 SFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHS 121
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
Y + + + +N+Y K G +A +F + + SWN +I L+ G +
Sbjct: 122 YGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMD 181
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACSHSG----LVEMGRYYFGLMSSTFGISPDVAHY 182
AI +F M+ G PD IT ++SAC G +++ +Y F ++ + + +
Sbjct: 182 AIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTV---ILMS 238
Query: 183 ACMVDLLGRGG 193
++D+ G+ G
Sbjct: 239 NSLIDMYGKCG 249
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N SW S+I + G EA+ F M SGV P+ T + +LS+C H G + G
Sbjct: 261 MEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEG 320
Query: 62 KKAHDYICD-NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALA 119
+ D + + IT + ++++ + G A + MP K N V W ++GA
Sbjct: 321 RFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGACE 380
Query: 120 LHGSGKEAIEMFEKMRA 136
HG+ A + E ++A
Sbjct: 381 KHGNVDMAEWVAENLQA 397
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 188/319 (58%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K V+WN++I + Q G EA+ LFC M V PD TLV+++++ + + + K
Sbjct: 384 KTNVTWNAMILGYAQNGCVNEALYLFCVMQSQEVKPDCFTLVAVITALADLSVNRMAKWI 443
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + V + +L++MYAKCGA QTA +F M +++V++WN +I HG G
Sbjct: 444 HGLAIRTFMDNDVYVATALIDMYAKCGATQTARKLFDMMHERHVITWNAMIDGYGTHGLG 503
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
KEAI++F+ M+ + P++ TF ++SACSHSG VE G ++F M +G+ P + HY+
Sbjct: 504 KEAIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKEDYGLEPSMDHYSA 563
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VDLLGR G L A +LI+++P+KP V GA+LGACK N+E+G++ +L EL +
Sbjct: 564 VVDLLGRAGKLHGAWNLIEEMPIKPGITVLGAMLGACKIHKNVELGEKAADKLFELDPDE 623
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
G +VLL+NMY + WD + K+R M GI K S +E+ + F NH +
Sbjct: 624 GGYHVLLANMYVSASMWDKVAKVRTAMEKKGIHKTPGCSFVELRNEVHTFYSGSTNHPQA 683
Query: 305 TSIYSMVDQLMDHLKSVGY 323
IY+ ++ L D ++ GY
Sbjct: 684 KKIYAFLEALGDKIRDAGY 702
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 142/315 (45%), Gaps = 33/315 (10%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K AVSWN++I + Q G+ EA F +M GV P +++ L++C+ +GDL G+
Sbjct: 283 KCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPTRVAIMAALTACADLGDLERGRFV 342
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + V + NSL++MY+KC + A IF + +K V+WN +I A +G
Sbjct: 343 HKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKTNVTWNAMILGYAQNGCV 402
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA+ +F M++ + PD T +++A + + M ++ GL TF + DV
Sbjct: 403 NEALYLFCVMQSQEVKPDCFTLVAVITALADLSVNRMAKWIHGLAIRTF-MDNDVYVATA 461
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
++D+ + G A L + + + W A++ T G +GK+ +
Sbjct: 462 LIDMYAKCGATQTARKLFDMMHER-HVITWNAMIDGYGTHG---LGKEAI---------- 507
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMND----SGIKKCRAISSIEIDGCCYQFMVDDKN 300
+D+M+K I ND S I C +E +Q M +D
Sbjct: 508 --------------DIFDNMQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKEDYG 553
Query: 301 HEVSTSIYSMVDQLM 315
E S YS V L+
Sbjct: 554 LEPSMDHYSAVVDLL 568
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 110/214 (51%), Gaps = 2/214 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ VSW S+I+ + Q G A++LF RM +G+ D+ TLVSIL + + + DL +GK
Sbjct: 182 KDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLVSILPAVADIKDLRIGKSI 241
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H Y V++ N+L+ MY +CG + A +F GM K VSWN +I A G
Sbjct: 242 HGYALRLGFESKVSVINALLYMYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQIGKS 301
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+EA F KM G+ P + L+AC+ G +E GR+ L+ + +V
Sbjct: 302 EEAFATFLKMLDEGVEPTRVAIMAALTACADLGDLERGRFVHKLVLQK-KLDFEVPVMNS 360
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
++ + + + A S+ + L K + V W A++
Sbjct: 361 LLSMYSKCKRVDLAASIFENLKKKTN-VTWNAMI 393
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 127/294 (43%), Gaps = 38/294 (12%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K V +++++ + + +A+ + RM GV P +L C +L G++
Sbjct: 81 KQDVLYHAMLKGYAKNSSLCDALCFYHRMQNDGVRPVVYDFAYLLQLCGKKFELEKGREI 140
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + N + +M Y KCG + A +F + +K++VSW +I A +G
Sbjct: 141 HGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFERLSEKDLVSWTSLIAGYAQNGYP 200
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA---- 180
K A+++F +M+ +GL D +T +L A + + +G+ G + G V+
Sbjct: 201 KRALDLFYRMQEAGLKADSVTLVSILPAVADIKDLRIGKSIHG-YALRLGFESKVSVINA 259
Query: 181 ----HYACMVDLLGRGGFLG-----------------------EAMSLIQKL---PMKPD 210
++ C + + R F G EA + K+ ++P
Sbjct: 260 LLYMYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPT 319
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL--LSNMYSESQRWD 262
V A L AC G+LE G+ + K +L+ + D + V+ L +MYS+ +R D
Sbjct: 320 RVAIMAALTACADLGDLERGRFVHKLVLQ-KKLDFEVPVMNSLLSMYSKCKRVD 372
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MM ++ ++WN++I + G EA+++F M V+P++ T +S++S+CSH G +
Sbjct: 481 MMHERHVITWNAMIDGYGTHGLGKEAIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEE 540
Query: 61 GKKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGAL 118
G + D + S+ ++++++ + G L A ++ MP K + ++GA
Sbjct: 541 GLHFFQSMKEDYGLEPSMDHYSAVVDLLGRAGKLHGAWNLIEEMPIKPGITVLGAMLGAC 600
Query: 119 ALHGSGKEAIEMFEKMRASGLF---PDEITFTGLLS 151
+H + +E+ EK A LF PDE + LL+
Sbjct: 601 KIHKN----VELGEKA-ADKLFELDPDEGGYHVLLA 631
>Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:11695650-11697815 | 20130731
Length = 446
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 193/330 (58%), Gaps = 1/330 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
M K+ SW++II H E + L +M G + +TLV++LS+C+H+G L
Sbjct: 33 MDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSEGRCRVEESTLVNVLSACTHLGSPDL 92
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK H + N ++V + SL++MY K G L+ + +F M +KN S+ V+I LA+
Sbjct: 93 GKCIHGILLRNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAI 152
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG GKEA+++F +M GL PD++ + G+ SACSH+GLVE G F M I P V
Sbjct: 153 HGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQ 212
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVDLLGR G L EA LI+ + +KP+ V+W +LL ACK NLE+GK + L L
Sbjct: 213 HYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVHHNLEIGKIAAENLFML 272
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ +SG Y++L+NMY+++Q+WDD+ KIR + + + + S IE Y+F+ DK+
Sbjct: 273 NQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAERNLVQTPGFSLIEAKRKVYKFVSQDKS 332
Query: 301 HEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
IY M+ Q+ LK GY S V
Sbjct: 333 IPQWNIIYEMIHQMEWQLKFEGYIPDTSQV 362
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Query: 77 VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRA 136
V + NSL+NMY KCG ++ A D+F GM +K+V SW+ IIGA A E + + KM +
Sbjct: 7 VIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSS 66
Query: 137 SGL-FPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFL 195
G +E T +LSAC+H G ++G+ G++ +V ++D+ + G L
Sbjct: 67 EGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNIS-ELNVVVKTSLIDMYVKSGCL 125
Query: 196 GEAMSLIQKLPMK----------------------------------PDAVVWGALLGAC 221
+ + + + + K PD VV+ + AC
Sbjct: 126 EKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSAC 185
Query: 222 KTFGNLEMGKQILKQL 237
G +E G Q K +
Sbjct: 186 SHAGLVEEGLQCFKSM 201
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 181/288 (62%), Gaps = 2/288 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N V+WN +I+ + Q ++ EA+ LF M +G PD AT +S+LS C+ LALG
Sbjct: 276 MPERNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALG 335
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG-MPQKNVVSWNVIIGALAL 120
+ H Y+ +N+ + L +L++MYAK G L +A IF + +K+VV W +I ALA+
Sbjct: 336 ETVHAYLLKSNMAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAI 395
Query: 121 HGSGKEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG G EA+ +F+ M+ S L PD IT+ G+L ACSH GLVE + F LM+ ++GI P+
Sbjct: 396 HGHGNEALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEK 455
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY+CMVDLL R G EA L++ + ++P+ +WGALL C+ N+ + Q+ +L E
Sbjct: 456 EHYSCMVDLLSRAGHFREAEKLMETMSIRPNIAIWGALLNGCQIHENIPVASQVKVRLAE 515
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEI 287
L SG+Y LLSN+Y+ S +W+++ + RK+M I K SS+E+
Sbjct: 516 LEPIQSGIYALLSNIYANSGKWEEVNRTRKMMKHKRIAKTIGHSSVEM 563
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 132/253 (52%), Gaps = 12/253 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P N V+W +I+ +V Q EA+E+F M GV + T+V+ L +C+ D+ G
Sbjct: 168 IPKWNVVAWTCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTG 227
Query: 62 KKAHDYIC----DNNITVS---VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVI 114
+ H+ +C D + S V L +++ MYAKCG L A ++F MP++N+V+WN +
Sbjct: 228 RWVHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCM 287
Query: 115 IGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
I A + EA+ +F M A+G PD+ TF +LS C+ ++ +G + +
Sbjct: 288 INAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKS-N 346
Query: 175 ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
++ D+A ++D+ + G LG A + K D V+W +++ A G+ G + L
Sbjct: 347 MAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGH---GNEAL 403
Query: 235 KQLLELGRYDSGL 247
L ++ + DS L
Sbjct: 404 -SLFQIMQEDSSL 415
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 111/225 (49%), Gaps = 7/225 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N +NS+I + + ++ L+ +M +G PD+ T +L +CS + D GK H
Sbjct: 71 NVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSFIYDQVSGKCVH 130
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
I + +V + L+NMY +C +++ + +F +P+ NVV+W +I ++ +
Sbjct: 131 SCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQPR 190
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF------GLMSSTFGISPDV 179
EA+E+F++M G+ +E+T L AC+ V+ GR+ G F + +V
Sbjct: 191 EALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFASNSNV 250
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTF 224
+V++ + G+L A L K+P + + V W ++ A +
Sbjct: 251 ILATAIVEMYAKCGWLNVARELFNKMPER-NIVAWNCMINAYNQY 294
>Medtr2g013500.1 | PPR containing plant-like protein | HC |
chr2:3639056-3640975 | 20130731
Length = 515
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 184/287 (64%), Gaps = 3/287 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
M ++ +SW +++ + + GQ EA+E+F +M VSG P+ +T+V++LS+C+ +G L+L
Sbjct: 218 MSKRDVISWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSL 277
Query: 61 GKKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G HDYI ++ V + N+L+NMY KCG ++ + +F + K+V+SW +I LA
Sbjct: 278 GCWVHDYIEKRIDLDVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVICGLA 337
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
++G GK+ ++MF M G+ PD++TF GLLSACSH GLV G +F M ++GI P +
Sbjct: 338 MNGYGKQVVQMFSHMLVHGVLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRDSYGIVPQM 397
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+HY CMVD+ GR EA++ ++ +P++ + +W ALL ACKT GN EM + I Q+ +
Sbjct: 398 SHYGCMVDMYGRASLFEEAVAFLKGMPVEAEGPIWSALLQACKTHGNEEMSEWIRGQIHD 457
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
G LLSN+Y+ S+RWDD +RKIM +G+KK +S +E
Sbjct: 458 -KNVGVGTLALLSNIYASSERWDDANNVRKIMRGTGLKKVAGLSWVE 503
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 121/242 (50%), Gaps = 17/242 (7%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + VSW S+IS + G EA+E F + V P+ TLVS +S+CS +G + G
Sbjct: 119 IPSPDVVSWTSLISGLSKCGFETEAIEAFSSI---NVKPNALTLVSAISACSSIGAIKFG 175
Query: 62 KKAHDY-----ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
K H Y + D NI N+ +++YAKCG A ++F M +++V+SW ++
Sbjct: 176 KAIHAYGLKSLMIDGNIV----FYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLLM 231
Query: 117 ALALHGSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI 175
A A G EA+E+F++M SG P+E T +LSAC+ G + +G + + +
Sbjct: 232 AYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKRIDL 291
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
D +V++ + G + + + + K D + WG ++ G GKQ+++
Sbjct: 292 DVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHK-DVISWGTVICGLAMNG---YGKQVVQ 347
Query: 236 QL 237
Sbjct: 348 MF 349
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 4/204 (1%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF 100
++ T L +C A G + H + + + N+L+ Y + +A +F
Sbjct: 57 NHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIFDGFIKNTLLYFYLSSNDVVSATRVF 116
Query: 101 FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE 160
+P +VVSW +I L+ G EAIE F + P+ +T +SACS G ++
Sbjct: 117 KSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSINVK---PNALTLVSAISACSSIGAIK 173
Query: 161 MGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
G+ + I ++ Y +DL + GF A ++ K+ K D + W LL A
Sbjct: 174 FGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMS-KRDVISWTTLLMA 232
Query: 221 CKTFGNLEMGKQILKQLLELGRYD 244
G ++ KQ++ G +
Sbjct: 233 YARGGQCGEAVEVFKQMIVSGEAE 256
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M+ K+ +SW ++I G + +++F M V GV+PD+ T + +LS+CSH+G ++
Sbjct: 320 MVVHKDVISWGTVICGLAMNGYGKQVVQMFSHMLVHGVLPDDVTFIGLLSACSHVGLVSE 379
Query: 61 GKKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGAL 118
G + D+ I ++ +++MY + + A+ GMP + W+ ++ A
Sbjct: 380 GMMFFKAMRDSYGIVPQMSHYGCMVDMYGRASLFEEAVAFLKGMPVEAEGPIWSALLQAC 439
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH 155
HG+ EM E +R G D+ G L+ S+
Sbjct: 440 KTHGNE----EMSEWIR--GQIHDKNVGVGTLALLSN 470
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 185/318 (58%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ ++W+ +I V+ + EAME+F +M G PD T+ SIL +CS L +GK+ H
Sbjct: 544 DEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIH 603
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
Y+ + + N+L++MYAKCG L + ++F MP K+V SWN +I A +HG+GK
Sbjct: 604 CYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGK 663
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+ +FEKM S + PD TFT +LSACSHS LVE G F MS + P+ HY C+
Sbjct: 664 EALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCV 723
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
VD+ R G L EA IQ++PM+P A+ W A L C+ + N+E+ K K+L E+ S
Sbjct: 724 VDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGS 783
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
YV L N+ ++ W + KIRK+M + GI K S + + F+ DK++ S
Sbjct: 784 ANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESD 843
Query: 306 SIYSMVDQLMDHLKSVGY 323
IY+ +D+L +K+ GY
Sbjct: 844 KIYNFLDELFAKIKAAGY 861
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 142/301 (47%), Gaps = 52/301 (17%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP +N V+WNS+ SC+V G + + +F M ++GV PD T++SIL +CS + DL
Sbjct: 403 LMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKS 462
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWN-------- 112
GK H + + + V +CN+L+++YAKC ++ A +F +P + V SWN
Sbjct: 463 GKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFT 522
Query: 113 ---------------------------VIIGALALHGSGKEAIEMFEKMRASGLFPDEIT 145
V+IG + +EA+E+F KM+ G PDE T
Sbjct: 523 NKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETT 582
Query: 146 FTGLLSACSHSGLVEMGR----YYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSL 201
+L ACS S + MG+ Y F D+A +VD+ + G L + ++
Sbjct: 583 IYSILRACSLSECLRMGKEIHCYVFRHWKDW-----DLARTNALVDMYAKCGGLSLSRNV 637
Query: 202 IQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL----KQLLELGRYDSGLYVLLSNMYSE 257
+P+K D W ++ A GN GK+ L K LL + + DS + + + S
Sbjct: 638 FDMMPIK-DVFSWNTMIFANGMHGN---GKEALSLFEKMLLSMVKPDSATFTCVLSACSH 693
Query: 258 S 258
S
Sbjct: 694 S 694
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 121/237 (51%), Gaps = 2/237 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP +N ++WNS+ SC+V G + + +F M ++GV PD + SIL +CS + DL
Sbjct: 302 LMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKS 361
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK H + + + V +C +L+N+YA C ++ A +F MP +NVV+WN +
Sbjct: 362 GKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVN 421
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G ++ + +F +M +G+ PD +T +L ACS ++ G+ G + G+ DV
Sbjct: 422 CGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGF-AVRHGMVEDVF 480
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++ L + + EA + +P + + W +L A T E G + Q+
Sbjct: 481 VCNALLSLYAKCVCVREAQVVFDLIPHR-EVASWNGILTAYFTNKEYEKGLYMFSQM 536
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 134/262 (51%), Gaps = 3/262 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP ++ V+WNS+ SC+V G + + +F M + GV PD T+ ILS+CS + DL
Sbjct: 201 LMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKS 260
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK H + + + +V + N+L+N+Y C ++ A +F MP +NV++WN +
Sbjct: 261 GKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVN 320
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G ++ + +F +M +G+ PD + + +L ACS ++ G+ G + G+ DV
Sbjct: 321 CGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGF-AVKHGMVEDVF 379
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+V+L + EA ++ +P + + V W +L G + G + ++++ L
Sbjct: 380 VCTALVNLYANCLCVREAQTVFDLMPHR-NVVTWNSLSSCYVNCGFPQKGLNVFREMV-L 437
Query: 241 GRYDSGLYVLLSNMYSESQRWD 262
L +LS +++ S D
Sbjct: 438 NGVKPDLVTMLSILHACSDLQD 459
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 121/233 (51%), Gaps = 2/233 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V+WNS+ +C+V G + + +F +M ++ V + T+ SIL CS + DL GK+
Sbjct: 104 RDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEI 163
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ + + V + ++ +N YAKC ++ A +F MP ++VV+WN + G
Sbjct: 164 HGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFP 223
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
++ + +F +M G+ PD +T + +LSACS ++ G+ G + G+ +V
Sbjct: 224 QKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGF-ALKHGMVENVFVSNA 282
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+V+L + EA ++ +P + + + W +L G + G + +++
Sbjct: 283 LVNLYESCLCVREAQAVFDLMPHR-NVITWNSLASCYVNCGFPQKGLNVFREM 334
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 101/221 (45%), Gaps = 2/221 (0%)
Query: 18 VQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSV 77
+ G EA++++ G+ PD +++ +C+ D K+ HD + V
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75
Query: 78 TLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRAS 137
++ N+ ++ Y KC ++ A +F + ++VV+WN + G ++ + +F KM +
Sbjct: 76 SIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLN 135
Query: 138 GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGE 197
+ + +T + +L CS ++ G+ G + G+ DV + V+ + + E
Sbjct: 136 KVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVR-HGMVEDVFVSSAFVNFYAKCLCVRE 194
Query: 198 AMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
A ++ +P + D V W +L G + G + ++++
Sbjct: 195 AQTVFDLMPHR-DVVTWNSLSSCYVNCGFPQKGLNVFREMV 234
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 7/142 (4%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MMP+K+ SWN++I + G EA+ LF +M +S V PD+AT +LS+CSH +
Sbjct: 640 MMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEE 699
Query: 61 GKKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGAL 118
G + + + D+ + ++++Y++ G L+ A MP + ++W +
Sbjct: 700 GVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGC 759
Query: 119 ALHGSGKEAIEMFEKMRASGLF 140
++ + + A K+ A LF
Sbjct: 760 RVYKNVELA-----KISAKKLF 776
>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:18562024-18564318 | 20130731
Length = 740
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 187/307 (60%), Gaps = 2/307 (0%)
Query: 25 EAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLM 84
E++ LF M V G+ P+ T+V+++S+CS++G ++ G H ++ N I ++ + + +
Sbjct: 349 ESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFV 408
Query: 85 NMYAKCGALQTAMDIFFGMPQ--KNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPD 142
+MY+KCG L A +F MP+ ++ + +IG A+HG G +A+E++ KM+ GL PD
Sbjct: 409 DMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPD 468
Query: 143 EITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLI 202
TF + ACSH GLVE G F M G+ P + HY C++DLLGR G L EA +
Sbjct: 469 SATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWL 528
Query: 203 QKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWD 262
+PMKP+AV+W +LLGA + GNL +G+ L +L+EL SG YVLLSNMY+ R +
Sbjct: 529 ADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVN 588
Query: 263 DMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSIYSMVDQLMDHLKSVG 322
D+K++RK+M G+ K S +EI G ++F+ D++H S IY + ++ L+ G
Sbjct: 589 DVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLEEYG 648
Query: 323 YPCKHSD 329
+ + S+
Sbjct: 649 HKARTSE 655
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 119/291 (40%), Gaps = 66/291 (22%)
Query: 10 WNSIISCHVQEGQHAE---AMELFCRMCVS-GVMPDNATLVSILSSC-SHMGDLALGKKA 64
+N++IS + + + A L+ ++ + + P++ T S+ +C S+ G
Sbjct: 214 YNTLISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSFTFPSLFKACCSNQSWFHYGPLL 273
Query: 65 HDYIC-------DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
H ++ DN + S L+N YAK G + + IF + + ++ +WNVI+ A
Sbjct: 274 HTHVLKFLQPPFDNFVQAS------LLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNA 327
Query: 118 LALHGSGK-------------EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLV----- 159
A S E++ +F M+ G+ P+E+T L+SACS+ G V
Sbjct: 328 YARSSSYHSYSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFW 387
Query: 160 ----------EMGRYY-------------FGLMSSTFGISP----DVAHYACMVDLLGRG 192
+M R+ L F P D Y M+
Sbjct: 388 VHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVH 447
Query: 193 GFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
G+ +A+ L +K+ K PD+ + + AC G +E G +I K + E+
Sbjct: 448 GYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEV 498
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+++ + ++I G +A+EL+ +M G++PD+AT V + +CSH+G + G +
Sbjct: 432 RDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEI 491
Query: 65 HDYICD-NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALALHG 122
+ + + + + L+++ + G L+ A + MP K N V W ++GA +HG
Sbjct: 492 FKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHG 551
Query: 123 S 123
+
Sbjct: 552 N 552
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 197/324 (60%), Gaps = 2/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG--VMPDNATLVSILSSCSHMGDLA 59
MP KN VSW+++I+C+ + +A+ELF M + +P+ T+VS+L +C+ + L
Sbjct: 240 MPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALE 299
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
GK H Y+ + ++ + N+L+ MY +CG + T +F M +++V+SWN +I
Sbjct: 300 HGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYG 359
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+HG GK+AI++FE M G+ P ITF +L ACSH+GLVE + F M + + I P +
Sbjct: 360 MHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRM 419
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HYACMVD+LGR L EA+ LIQ + KP VWG+LLG+C+ N+E+ ++ L E
Sbjct: 420 EHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFE 479
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
L ++G YVLLS++Y++S+ W+D++++RK + G++K + S IE+ Y + ++
Sbjct: 480 LEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEE 539
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
+ + + + L+ +K+ GY
Sbjct: 540 YNPQIEELCAFLITLLTEIKNQGY 563
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 133/319 (41%), Gaps = 54/319 (16%)
Query: 3 PVKNAVSWNS--IISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
P K+ S N+ +I + G +A++L C C P T +++SC L+
Sbjct: 37 PTKDIKSNNNDDLIQSLCRGGNLKQAVQLLC--CEPN--PTKKTFELLINSCIEQNSLSD 92
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G H + + + L L+NMY G++ A +F +K + WN I ALA+
Sbjct: 93 GVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAM 152
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS---------------HSGLVEMG--- 162
G++ + ++ +M G+ + T+T +L AC H+ ++ G
Sbjct: 153 ASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEG 212
Query: 163 -------------RY-YFGLMSSTFGISPD--VAHYACMVDLLGRGGFLGEAMSLIQKLP 206
R+ Y SS FG PD + ++ M+ + +A+ L Q +
Sbjct: 213 HVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMM 272
Query: 207 MK-----PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL--LSNMY---- 255
++ P+ + ++L AC + LE GK + +L G DS L VL L MY
Sbjct: 273 LEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRG-LDSTLPVLNTLITMYGRCG 331
Query: 256 --SESQRWDDMKKIRKIMN 272
S QR D K R +++
Sbjct: 332 EISTGQRVFDYMKKRDVIS 350
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 190/320 (59%), Gaps = 1/320 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V+W ++I + Q +A+ELF M G P++ TL ++LS S + L GK+
Sbjct: 372 RDVVAWTAMIVGYAQNSLLKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQL 431
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM-PQKNVVSWNVIIGALALHGS 123
H SV++ N+L+ MY+K G ++ A +F + +++ ++W +I ALA HG
Sbjct: 432 HAIAIRLKEVSSVSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIALAQHGL 491
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
G EAIE+FE M L PD IT+ G+LSAC+H GLVE G+ YF LM + I P +HYA
Sbjct: 492 GNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSHYA 551
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
CM+DL GR G + EA + I+ +P++PD + WG+LL AC+ N+++ K ++LL +
Sbjct: 552 CMIDLFGRAGLIEEAYNFIKTMPIEPDGIAWGSLLSACRVHKNVDLAKVAAEKLLLIDPN 611
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
+SG Y L+N +S W++ K+RK+M D +KK + S ++I + F V+D H
Sbjct: 612 NSGAYSALANTHSACGEWEEAAKVRKLMRDREVKKEQGFSWVQIQNKVHIFGVEDALHPQ 671
Query: 304 STSIYSMVDQLMDHLKSVGY 323
+IY M+ ++ +K +G+
Sbjct: 672 RDAIYRMISKIWKEIKKIGF 691
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 36/270 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P ++VSW ++I + Q G+ A+ F +M G++P T ++L+SC G L +G
Sbjct: 102 IPEPDSVSWTTMIVGYNQMGRFNTAIHTFQQMISDGILPTQFTFTNVLASCVATGSLDIG 161
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAK-------------------------------C 90
KK H ++ ++ V + NSL+NMY K
Sbjct: 162 KKVHSFVVKLGLSGVVPVANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQS 221
Query: 91 GALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKM-RASGLFPDEITFTGL 149
G A+ +F M ++++SWN II G +A+E F M R+S L PD+ T +
Sbjct: 222 GRFDVALALFDQMTDRDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSV 281
Query: 150 LSACSHSGLVEMGRYYFG-LMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQ-KLPM 207
LSAC++ +++G+ ++ + IS V + ++ + + G + A ++++ +
Sbjct: 282 LSACANLESLKLGKQIHAYIVRADIDISGAVGN--ALISMYAKSGAVEVARTIVELRGTS 339
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ + + +LL G++ ++I L
Sbjct: 340 NINVIAFTSLLNGYVKIGDVNPAREIFDSL 369
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 127/299 (42%), Gaps = 68/299 (22%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVM-PDNATLVSILSSCSHMGDLAL 60
M ++ +SWNSII+ + +G ++A+E F M S + PD TL S+LS+C+++ L L
Sbjct: 234 MTDRDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKL 293
Query: 61 GKKAHDYICDNNITVSVTLCN---------------------------------SLMNMY 87
GK+ H YI +I +S + N SL+N Y
Sbjct: 294 GKQIHAYIVRADIDISGAVGNALISMYAKSGAVEVARTIVELRGTSNINVIAFTSLLNGY 353
Query: 88 AKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFT 147
K G + A +IF + ++VV+W +I A + K+A+E+F M + G P+ T
Sbjct: 354 VKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKDALELFRLMISEGPRPNSYTLA 413
Query: 148 GLLSACSHSGLVEMGRYYFGL------------------MSSTFG-------------IS 176
+LS S ++ G+ + M S G
Sbjct: 414 AVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVGNALITMYSKSGCIKDARKVFNQICTE 473
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQ---KLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
D + M+ L + G EA+ L + K +KPD + + +L AC G +E GK+
Sbjct: 474 RDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKR 532
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 99/231 (42%), Gaps = 33/231 (14%)
Query: 40 PDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDI 99
P + T V +L S D G+ H I + + +SV L N+L+N Y+K + A +
Sbjct: 8 PKSDTFVYLLQSAIKSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTASFNDAHRL 67
Query: 100 FFGMPQKNVVSWNVIIGALALHGS-----------------------------GK--EAI 128
F MPQ+ SWN ++ + A G+ G+ AI
Sbjct: 68 FSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTAI 127
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
F++M + G+ P + TFT +L++C +G +++G+ + G+S V ++++
Sbjct: 128 HTFQQMISDGILPTQFTFTNVLASCVATGSLDIGKKVHSFVVK-LGLSGVVPVANSLLNM 186
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ G ++ ++ ++ D W ++ G ++ + Q+ +
Sbjct: 187 YVKSGDSLRVKAVFDRMRLR-DKSTWNIMISMHMQSGRFDVALALFDQMTD 236
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 196/329 (59%), Gaps = 3/329 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V+N +SWNS+I+ +Q G + +A++ M G PD +T LSSC+++ L +G
Sbjct: 416 MGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVG 475
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H+ I + + + N+L+ MYAKCG +Q+A +F + +++SWN +I AL+
Sbjct: 476 KQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALN 535
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EA FE+M + G PDE+TF G+LSACSH+GL G F M F I P H
Sbjct: 536 GYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEH 595
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+C+VDLLGR G L EA ++++ + +K +A +WG+LL AC+ N+E+GK +LLEL
Sbjct: 596 YSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELE 655
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+++ Y+ LSNM++E+ RW+D++++R +M + K S IE+ F+ DD
Sbjct: 656 PHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGK 715
Query: 302 EVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
+ SI +++ L H++ C SD+
Sbjct: 716 LRTESIKIILNTLSAHMRD---KCNISDM 741
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 41/263 (15%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPVK+ VS+NS+++ + Q G+ AM+ F RM V+ N + +++C DL
Sbjct: 168 MPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNC----DLGSA 223
Query: 62 KKAHDYICDNNITVSVT-LC--------------------------NSLMNMYAKCGALQ 94
+ + I D N VT LC N+++ Y + +
Sbjct: 224 WELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQID 283
Query: 95 TAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
A+ +F P K+ VSW +I G EA E++ +M + D T L+S
Sbjct: 284 EAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMP----YKDVAAKTALMSGLI 339
Query: 155 HSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW 214
+G ++ F ++ D + M+ + G + EA++L +++P+K +AV W
Sbjct: 340 QNGRIDEASQVFSQLNKR-----DAICWNSMIAGYCQSGRMSEALNLFRQMPVK-NAVSW 393
Query: 215 GALLGACKTFGNLEMGKQILKQL 237
++ G ++ +I + +
Sbjct: 394 NTMISGYAQAGEMDRATEIFEAM 416
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 109/240 (45%), Gaps = 23/240 (9%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPD---NATLVSILSSCSHMGD 57
+M ++ SW +I+C+ ++G +A ELF ++PD A ++++ + G
Sbjct: 104 LMAERDNFSWALMITCYTRKGMLEKARELF------ELVPDKLDTACWNAMIAGYAKKGR 157
Query: 58 LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
+K + + ++ NS++ Y + G + AM F M ++NVVSWN+++
Sbjct: 158 FDDAEKVFEKMPVKDLVSY----NSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAG 213
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
+ A E+FEK+ P+ +++ +L + G + R F M +S
Sbjct: 214 FVNNCDLGSAWELFEKIPD----PNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSW 269
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ A + DL + EA+ L ++ P K D V W ++ G L+ +++ Q+
Sbjct: 270 NAMIAAYVQDLQ-----IDEAVKLFKETPYK-DCVSWTTMINGYVRVGKLDEAREVYNQM 323
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 17/219 (7%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N VSWN++I+ ++ EA +LF M DN + +++ + G L
Sbjct: 74 MSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAER----DNFSWALMITCYTRKGMLEKA 129
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ + + D + N+++ YAK G A +F MP K++VS+N ++ +
Sbjct: 130 RELFELVPDK---LDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQN 186
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G A++ FE+M + + G ++ C E+ F + P+
Sbjct: 187 GKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWEL----FEKIP-----DPNAVS 237
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+ M+ R G + EA L ++P K + V W A++ A
Sbjct: 238 WVTMLCGFARHGKIVEARKLFDRMPCK-NVVSWNAMIAA 275
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 129/325 (39%), Gaps = 87/325 (26%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELF----CRMCVSGV------------------- 38
MP KN VSWN++I+ +VQ+ Q EA++LF + CVS
Sbjct: 261 MPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVY 320
Query: 39 --MP--DNATLVSILSSCSHMGDLALGKKA------HDYICDNNITV------------- 75
MP D A +++S G + + D IC N++
Sbjct: 321 NQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALN 380
Query: 76 --------SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ N++++ YA+ G + A +IF M +NV+SWN +I +G +A
Sbjct: 381 LFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDA 440
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF------GLMSSTFGISPDVAH 181
++ M G PD+ TF LS+C++ +++G+ G ++ F + +A
Sbjct: 441 LKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAM 500
Query: 182 YACM---------------VDLL---------GRGGFLGEAMSLIQKLPMK---PDAVVW 214
YA VDL+ G+ EA +++ + PD V +
Sbjct: 501 YAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTF 560
Query: 215 GALLGACKTFGNLEMGKQILKQLLE 239
+L AC G G + K ++E
Sbjct: 561 IGMLSACSHAGLTNQGVDLFKCMIE 585
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 108/235 (45%), Gaps = 21/235 (8%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN ++NS+++ + G+ ++A +LF +M ++ N + L H + K
Sbjct: 46 KNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYL----HNNMVEEAHKL 101
Query: 65 HDYICD-NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALALHG 122
D + + +N + ++ ++ Y + G L+ A ++F +P K + WN +I A G
Sbjct: 102 FDLMAERDNFSWAL-----MITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKKG 156
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+A ++FEKM D +++ +L+ + +G + + +F M+ +V +
Sbjct: 157 RFDDAEKVFEKMPVK----DLVSYNSMLAGYTQNGKMGLAMKFFERMAER-----NVVSW 207
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
MV LG A L +K+P P+AV W +L G + +++ ++
Sbjct: 208 NLMVAGFVNNCDLGSAWELFEKIP-DPNAVSWVTMLCGFARHGKIVEARKLFDRM 261
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
NS++ ++AK G + A +F M Q+N+VSWN +I + +EA ++F+ M
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAER--- 108
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
D ++ +++ + G++E R F L+ D A + M+ + G +A
Sbjct: 109 -DNFSWALMITCYTRKGMLEKARELFELVPDKL----DTACWNAMIAGYAKKGRFDDAEK 163
Query: 201 LIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ +K+P+K D V + ++L G + + + +++ E
Sbjct: 164 VFEKMPVK-DLVSYNSMLAGYTQNGKMGLAMKFFERMAE 201
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 89 KCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
K G + A +F + KN ++N ++ A +G +A ++F+KM L +++
Sbjct: 29 KQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNL----VSWNT 84
Query: 149 LLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK 208
+++ H+ +VE F LM+ S +A M+ R G L +A L + +P K
Sbjct: 85 MIAGYLHNNMVEEAHKLFDLMAERDNFS-----WALMITCYTRKGMLEKARELFELVPDK 139
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQL 237
D W A++ G + +++ +++
Sbjct: 140 LDTACWNAMIAGYAKKGRFDDAEKVFEKM 168
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 189/321 (58%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P VSW+S++S +V G++ + M+ F M ++ D T+ +I+S+C++ G L GK
Sbjct: 344 PKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGK 403
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ H YI + + + +SL++MY+K G+L A+ IF + + NVV W +I ALHG
Sbjct: 404 QIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHG 463
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
GKEAI +FE M G+ P+E+TF G+L+ACSH GL+E G YF +M T+ I+P+V HY
Sbjct: 464 QGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHY 523
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
MV+L GR G L EA + I + + VW + L +C+ N MGK + + LL+
Sbjct: 524 TSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAP 583
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHE 302
D Y+LLSNM S + +WD+ +R +M G+KK S +++ + F V D++H
Sbjct: 584 SDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHP 643
Query: 303 VSTSIYSMVDQLMDHLKSVGY 323
IYS +D L+ LK +GY
Sbjct: 644 QDKEIYSYLDSLIGRLKEIGY 664
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 141/342 (41%), Gaps = 84/342 (24%)
Query: 5 KNAVSWNSIISCHVQEGQHAE-AMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
KN +W +IS + +E LF M G P+ TL S+L CS ++ GK
Sbjct: 96 KNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKG 155
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKC-------------------------------GA 92
H +I N + V L NS++++Y KC G
Sbjct: 156 IHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGD 215
Query: 93 LQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA 152
++ ++++F P K+VVSWN II L G + A+E M A G +TF+ L
Sbjct: 216 VEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALIL 275
Query: 153 CSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM----- 207
S LVE+GR G + TFG++ D + +V++ G+ G + +A ++++ +P+
Sbjct: 276 VSSLSLVEVGRQLHGRV-LTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRK 334
Query: 208 --------KPDA-----------VVW--------------------------GALLGACK 222
+P A VW ++ AC
Sbjct: 335 GNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACA 394
Query: 223 TFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDD 263
G LE GKQI + ++G R D+ + L +MYS+S DD
Sbjct: 395 NAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDD 436
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 120/257 (46%), Gaps = 20/257 (7%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAME-LFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
P K+ VSWN+II +Q G A+E L+C M G T L S + + +
Sbjct: 226 FPNKDVVSWNTIIDGLIQCGYERLALEQLYC-MVAHGTEFSPVTFSIALILVSSLSLVEV 284
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF------------FGM----P 104
G++ H + + + +SL+ MY KCG + A I FG+ P
Sbjct: 285 GRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEP 344
Query: 105 QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY 164
+ +VSW+ ++ +G ++ ++ F M + D T ++SAC+++G++E G+
Sbjct: 345 KARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQ 404
Query: 165 YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTF 224
+ G+ D + ++D+ + G L +A+ + +++ +P+ V+W +++ C
Sbjct: 405 IHAYIQK-IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIK-EPNVVLWTSMISGCALH 462
Query: 225 GNLEMGKQILKQLLELG 241
G + + + +L LG
Sbjct: 463 GQGKEAISLFEGMLNLG 479
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 3/192 (1%)
Query: 47 SILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK 106
S L S + +G + H + + N L+ +Y K L A +F + K
Sbjct: 37 SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHK 96
Query: 107 NVVSWNVIIGALA-LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY 165
N +W ++I A GS + +F +M+A G P++ T + +L CS ++ G+
Sbjct: 97 NTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGI 156
Query: 166 FGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
+ G+ DV ++DL + A S + L ++ D V W ++GA G
Sbjct: 157 HAWILRN-GVGGDVVLENSILDLYLKCKEFEYAESFFE-LMIEKDVVSWNIMIGAYLREG 214
Query: 226 NLEMGKQILKQL 237
++E ++ +
Sbjct: 215 DVEKSLEMFRNF 226
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 194/312 (62%), Gaps = 3/312 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ SW+S I +V+ G++ EAM +F +M G + T+VS+LS+C+H+G L G
Sbjct: 206 MQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKG 265
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP--QKNVVSWNVIIGALA 119
+ H YI DN + +++ L SL++MYAKCGA++ A+ +F G+ Q +V WN +IG LA
Sbjct: 266 RMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLA 325
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG +E++++F++M+ +G+ DEIT+ LL+AC+H GLV+ +F + G++P
Sbjct: 326 THGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFFESLVKR-GMTPTS 384
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HYACMVD+L R G L A I ++P++P A + GA+ C N ++ + + ++L+E
Sbjct: 385 EHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCINHRNFDLAETVGRKLIE 444
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
L + G Y+ LSN+Y+ +RWDD K +R+ M G+KK S +EI ++F+ DK
Sbjct: 445 LDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFSFVEISEIHHRFIAHDK 504
Query: 300 NHEVSTSIYSMV 311
H S YSM+
Sbjct: 505 THPDSDETYSML 516
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 34/276 (12%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH--- 65
SWN II + ++ +F +M GV PD T ++ + + + G H
Sbjct: 81 SWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQKSGVSVHAQI 140
Query: 66 -------DYICDNNITVSVTLC---------------------NSLMNMYAKCGALQTAM 97
D N++ C NS+++ YAKCG + A
Sbjct: 141 IKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAKCGEMAMAQ 200
Query: 98 DIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG 157
+F M +++V SW+ I G +EA+ +FEKMRA G +E+T +LSAC+H G
Sbjct: 201 KVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSACAHLG 260
Query: 158 LVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM-KPDAVVWGA 216
++ GR + + + +VD+ + G + EA+ + + + + D +W A
Sbjct: 261 ALQKGRMMHQYIIDNL-LPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFIWNA 319
Query: 217 LLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLL 251
++G T G +E ++ K++ G R D Y+ L
Sbjct: 320 MIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCL 355
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 127/320 (39%), Positives = 196/320 (61%), Gaps = 2/320 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN VSWN++IS ++G+ EA+ LF +M G T ++L S S G L GK
Sbjct: 259 KNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWL 318
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ + + + N+L++MYAK G + A +F + + +VVS N ++ A HG G
Sbjct: 319 HAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLG 378
Query: 125 KEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
KEA+E+FE+M + P++ITF +L+ACSH+GL++ G YYF LM +G+ P ++HY
Sbjct: 379 KEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSHYT 437
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
+VDL GR G L +A S I+++P++P+A +WGALLGA K N EMG +++LEL +
Sbjct: 438 TVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPF 497
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
G + LLSN+Y+ + +W D+ K+RK M DSG+KK A S +EI+ + F +D +H
Sbjct: 498 YPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQ 557
Query: 304 STSIYSMVDQLMDHLKSVGY 323
+Y M + L +K +GY
Sbjct: 558 KNKVYEMWENLNQKIKEIGY 577
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 3/171 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEA---MELFCRMCVSGVMPDNATLVSILSSCSHMGDL 58
M VK+ V+W S+I+ + Q+G + A + LF M G+ P+ L S++ C +G
Sbjct: 152 MCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSC 211
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
GK+ H +V + +SL++MYA+CG L+ + +F + KN VSWN +I
Sbjct: 212 VDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGF 271
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM 169
A G G+EA+ +F KM+ G E T++ LL + S +G +E G++ M
Sbjct: 272 ARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHM 322
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 40 PDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDI 99
PD +L C+ +G L GK H ++ ++ + + NS++ MYAKCG+L+ A +
Sbjct: 89 PDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQV 148
Query: 100 FFGMPQKNVVSWNVIIGALALHG---SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS 156
F M K+VV+W +I + G S A+ +F +M GL P+E + L+ C
Sbjct: 149 FDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFL 208
Query: 157 GLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGA 216
G G+ G +G +V + +VD+ R G L E+ + +L K + V W A
Sbjct: 209 GSCVDGKQIHGC-CWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESK-NEVSWNA 266
Query: 217 LLGACKTFGNLEMGKQILKQLLELGR 242
L+ F G++ L +++ R
Sbjct: 267 LISG---FARKGEGEEALGLFVKMQR 289
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 241 bits (615), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 198/332 (59%), Gaps = 3/332 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+PVK+ V+W S+++ + Q +A++ F +M +GV+ D TLV +S+C+ +G
Sbjct: 201 LPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYA 260
Query: 62 KKAHDYICDNNITV--SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
+ + +V + ++L++MY+KCG ++ A ++F GM + NV S++ +I A
Sbjct: 261 DWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFA 320
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+HG + AI++F +M +G+ P+ +TF GL +ACSH+G+VE G+ FG M +G+SP
Sbjct: 321 VHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTA 380
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HYACM DLLGR G L +A+ L+Q +PM+P+ VWGALLGA GN ++ + + L E
Sbjct: 381 DHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFE 440
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEI-DGCCYQFMVDD 298
L + G Y+LLS Y+ + +WDD+ ++RK+M + ++K S +E +G ++F D
Sbjct: 441 LEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGD 500
Query: 299 KNHEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
H I +D L+ LK GY K + V
Sbjct: 501 VKHPEINEIKKALDDLLQRLKCTGYQPKLNSV 532
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 122/300 (40%), Gaps = 69/300 (23%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N ++++I + + G ++ L+ M + V P + T ++ S + + +LG + H
Sbjct: 76 NPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSL---LKNPSLGSQLH 132
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS-- 123
+ + + N++++MY K G L A +F MP ++VV+W +I A A G
Sbjct: 133 LHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMD 192
Query: 124 -----------------------------GKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
K+A++ F KMR +G+ DEIT G +SAC+
Sbjct: 193 SACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACA 252
Query: 155 HSGLVEMGRYYFGLM-SSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP------- 206
G+ + + SS FG +V + ++D+ + G + EA ++ + +
Sbjct: 253 QLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSY 312
Query: 207 ---------------------------MKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+KP+ V + L AC G +E G+Q+ + E
Sbjct: 313 SSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKE 372
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 241 bits (614), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 193/333 (57%), Gaps = 4/333 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV----MPDNATLVSILSSCSHMGD 57
M ++ VSW+++ISC V+ AEA+ +F +M + D A ++S++S+ S +G
Sbjct: 138 MRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGV 197
Query: 58 LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
+ LG H +I I ++V L +L+NMY++CG + ++ +F MP++NVV+W +I
Sbjct: 198 IELGIWVHSFIVRMGIVMTVPLGTALINMYSRCGLIDRSVKVFDEMPERNVVTWTALING 257
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
LA+HG +EA+++F +M+ SGL PD F G+L ACSH GLVE G F M FGI P
Sbjct: 258 LAVHGRSREALKVFYEMKESGLKPDGALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKP 317
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ HY CMVDLLGR G + EA ++++P+KP++V+W LLGAC +L + ++ +++
Sbjct: 318 MLEHYGCMVDLLGRAGLILEAFDFVEEMPLKPNSVIWRTLLGACVNHNHLGLAEKARERI 377
Query: 238 LELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
+EL Y G YVLLSN Y W +R M + I K +S + ID ++F+
Sbjct: 378 IELDPYHDGDYVLLSNAYGRVGNWGGKAGLRNSMKQNRIVKEPGLSFVHIDQVVHEFVSG 437
Query: 298 DKNHEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
D H I + ++D +K GY S V
Sbjct: 438 DHVHPQWEEITKFLASIIDTVKLGGYTPNTSSV 470
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
D NI V N+L+N Y G+L A+ +F M ++++VSW+ +I L + EA+
Sbjct: 109 DTNIFVQ----NALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALS 164
Query: 130 MFEKM----RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
+F++M R + D ++SA S G++E+G + + GI V +
Sbjct: 165 VFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVR-MGIVMTVPLGTAL 223
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYD 244
+++ R G + ++ + ++P + + V W AL+ G ++ ++ E G + D
Sbjct: 224 INMYSRCGLIDRSVKVFDEMPER-NVVTWTALINGLAVHGRSREALKVFYEMKESGLKPD 282
Query: 245 SGLYV 249
L++
Sbjct: 283 GALFI 287
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/324 (37%), Positives = 192/324 (59%), Gaps = 2/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P ++ VS +IIS + Q G EA+ELF R+ G+ + T +L++ S + L LG
Sbjct: 202 LPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLG 261
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H+++ + I V L NSL++MY+KCG L + IF M ++ V+SWN ++ + H
Sbjct: 262 KQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKH 321
Query: 122 GSGKEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS-TFGISPDV 179
G G+E +++F MR + + PD +T +LS CSH GL + G F MSS + P +
Sbjct: 322 GEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKM 381
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY C+VDLLGR G + EA I+K+P +P A +WG+LLGAC+ N+++G+ +QLLE
Sbjct: 382 EHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLE 441
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
+ ++G YV+LSN+Y+ + RW+D+ +R +M + K SSIE+D + F D+
Sbjct: 442 IEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDR 501
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
+H I V +L K VGY
Sbjct: 502 SHPRREEICMKVKELSTSFKEVGY 525
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 129/244 (52%), Gaps = 6/244 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSW ++IS + Q G ++A+ LF +M SG P+ T ++L+SC+ LG
Sbjct: 101 MPERNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLGFILG 160
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H I N V + +SL++MYAK G + A +F +P+++VVS II A
Sbjct: 161 RQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQL 220
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA+E+F +++ G+ + +T+TG+L+A S +++G+ + + I V
Sbjct: 221 GLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRS-EIPSFVVL 279
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D+ + G L + + + + + W A+L G G+++LK L L
Sbjct: 280 QNSLIDMYSKCGNLTYSRRIFDTM-YERTVISWNAMLVGYSKHGE---GREVLK-LFTLM 334
Query: 242 RYDS 245
R ++
Sbjct: 335 REET 338
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 40/272 (14%)
Query: 23 HAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNS 82
H + +M + G +IL+ C + G++ H ++ SV L
Sbjct: 21 HIHLQQPLLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTR 80
Query: 83 LMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPD 142
L+ +Y KC +L A ++F MP++NVVSW +I A + G +A+ +F +M SG P+
Sbjct: 81 LIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPN 140
Query: 143 EITFTGLLSACSHSGLVEMGRYYFGLM----------------------------SSTFG 174
E TF +L++C+ S +GR L+ + F
Sbjct: 141 EFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFE 200
Query: 175 ISPDVAHYACMVDLLGRG--GFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEM 229
P+ +C + G G EA+ L ++L MK + V + +L A L++
Sbjct: 201 CLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDL 260
Query: 230 GKQILKQLLELGRYDSGLYVLLSN----MYSE 257
GKQ+ +L R + +V+L N MYS+
Sbjct: 261 GKQVHNHVL---RSEIPSFVVLQNSLIDMYSK 289
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 190/324 (58%), Gaps = 1/324 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
++P K+A+SWNSII+ VQ G+ + F RM V P + S++ +C+H+ L+L
Sbjct: 287 ILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSL 346
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ H I + + +SL++MYAKCG ++ A +F + ++++V+W II A+
Sbjct: 347 GRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAM 406
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG +A+ +FE M G+ P + F +L+ACSH+GLV+ G YF M FGI+P +
Sbjct: 407 HGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLE 466
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLP-MKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HYA + DLLGR G L EA I + ++P VW LL AC+ ++E+ +++L +LL
Sbjct: 467 HYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLS 526
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
+ + G YVL+SN+YS +QRW D ++R M G+KK A S IE+ + FM DK
Sbjct: 527 VDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDK 586
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
+H I +D L++ ++ GY
Sbjct: 587 SHPYYDKINKALDVLLEQMEKEGY 610
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 126/242 (52%), Gaps = 3/242 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVM-PDNATLVSILSSCSHMGDLA 59
MMPV++ VSWN++I+ Q G + EA+++ M +G + PD+ TL SIL + D+
Sbjct: 185 MMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVN 244
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
GK+ H Y N V + +SL++MYAKC L+ ++ F+ +P+K+ +SWN II
Sbjct: 245 KGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCV 304
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+G + F +M + P ++F+ ++ AC+H + +GR G + G +
Sbjct: 305 QNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVR-LGFDDNE 363
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ +VD+ + G + A + ++ K D V W A++ C G+ + + +LE
Sbjct: 364 FIASSLVDMYAKCGNIKMARYVFDRID-KRDMVAWTAIIMGCAMHGHALDAVSLFENMLE 422
Query: 240 LG 241
G
Sbjct: 423 DG 424
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 18/247 (7%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
+W+SII C+ + F M V P+ S+L + + + L H
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG---------------MPQKNVVSWNV 113
+ + + N+L+N YAK D+F MP ++VVSWN
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 114 IIGALALHGSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST 172
+I A +G EA++M +M +G L PD T + +L + V G+ G
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256
Query: 173 FGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
G DV + ++D+ + L ++ LP K DA+ W +++ C G + G
Sbjct: 257 -GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRK-DAISWNSIIAGCVQNGEFDRGLG 314
Query: 233 ILKQLLE 239
+++L+
Sbjct: 315 FFRRMLK 321
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/324 (37%), Positives = 192/324 (59%), Gaps = 2/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P ++ VS +IIS + Q G EA+ELF R+ G+ + T +L++ S + L LG
Sbjct: 18 LPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLG 77
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H+++ + I V L NSL++MY+KCG L + IF M ++ V+SWN ++ + H
Sbjct: 78 KQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKH 137
Query: 122 GSGKEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS-TFGISPDV 179
G G+E +++F MR + + PD +T +LS CSH GL + G F MSS + P +
Sbjct: 138 GEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKM 197
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY C+VDLLGR G + EA I+K+P +P A +WG+LLGAC+ N+++G+ +QLLE
Sbjct: 198 EHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLE 257
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
+ ++G YV+LSN+Y+ + RW+D+ +R +M + K SSIE+D + F D+
Sbjct: 258 IEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDR 317
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
+H I V +L K VGY
Sbjct: 318 SHPRREEICMKVKELSTSFKEVGY 341
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 86 MYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEIT 145
MYAK G + A +F +P+++VVS II A G +EA+E+F +++ G+ + +T
Sbjct: 1 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 60
Query: 146 FTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKL 205
+TG+L+A S +++G+ + + I V ++D+ + G L + + +
Sbjct: 61 YTGVLTALSGLAALDLGKQVHNHVLRS-EIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTM 119
Query: 206 PMKPDAVVWGALLGACKTFGNLEMGKQILK 235
+ + W A+L G G+++LK
Sbjct: 120 -YERTVISWNAMLVGYSKHGE---GREVLK 145
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 190/322 (59%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN VSW +++ + Q G EA++ F M G+ PD+ TL S++SSC+++ L G
Sbjct: 336 MTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEG 395
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + +T+ N+L+ +Y KCG+++ + +F + K+ V+W ++ A
Sbjct: 396 AQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQF 455
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E I +FE M A GL PD++TF G+LSACS +GLVE G F M + GI P H
Sbjct: 456 GKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDH 515
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CM+DL R G + EA + I K+P PDA+ W LL +C+ +GN+++GK + L+EL
Sbjct: 516 YTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELD 575
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+++ YVLLS++Y+ +W+++ ++RK M D G++K S I+ + F DDK++
Sbjct: 576 PHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSN 635
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
S IYS +++L + GY
Sbjct: 636 PFSDQIYSELEKLNYKMIKEGY 657
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++++SW S+I+ Q G +A+++F M + + D T S+L++C + L G
Sbjct: 235 MRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEG 294
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H YI + ++ + ++L+ MY KC +++A +F M KNVVSW ++ +
Sbjct: 295 KQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN 354
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA++ F M+ G+ PD+ T ++S+C++ +E G F + T G+ +
Sbjct: 355 GYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGA-QFHARALTSGLISFITV 413
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+V L G+ G + ++ L ++ K D V W AL+ FG + + +L G
Sbjct: 414 SNALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGYAQFGKANETIGLFESMLAHG 472
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 127/311 (40%), Gaps = 76/311 (24%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS--GVMPDNATLVSILSSCSHMGDLA 59
MP ++ VSWNS+IS + G ++++ + M + + + T ++L S G +
Sbjct: 101 MPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNRITFSTLLILASKRGCVK 160
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVV---------- 109
LG++ H ++ V + + L++MY+K G + A +F +P+KNVV
Sbjct: 161 LGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLM 220
Query: 110 ---------------------SWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
SW +I +G ++AI++F +M+ L D+ TF
Sbjct: 221 RCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGS 280
Query: 149 LLSACS--------------------------HSGLVEM---------GRYYFGLMSSTF 173
+L+AC S LVEM F M+
Sbjct: 281 VLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCK- 339
Query: 174 GISPDVAHYACMVDLLGRGGFLGEAM---SLIQKLPMKPDAVVWGALLGACKTFGNLEMG 230
+V + M+ G+ G+ EA+ S +QK ++PD G+++ +C +LE G
Sbjct: 340 ----NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEG 395
Query: 231 KQILKQLLELG 241
Q + L G
Sbjct: 396 AQFHARALTSG 406
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 93/232 (40%), Gaps = 47/232 (20%)
Query: 47 SILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK 106
++L C + K H +I L N+L++ YAK G++ A +F MP
Sbjct: 14 ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHP 73
Query: 107 NVVSWNVIIGALALHGSGKEAIEMFEKM-RASG--------------------------- 138
N+ SWN I+ A + G E +F+ M R G
Sbjct: 74 NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133
Query: 139 -----LFPDEITFTGLLSACSHSGLVEMGRYY------FGLMSSTFGISPDVAHYACMVD 187
+ + ITF+ LL S G V++GR FG MS F SP +VD
Sbjct: 134 KNDGSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSP-------LVD 186
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ + G + A + +LP K + V++ L+ G +E K++ ++ E
Sbjct: 187 MYSKMGMISCARKVFDELPEK-NVVMYNTLIMGLMRCGRVEDSKRLFFEMRE 237
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 190/322 (59%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN VSW +++ + Q G EA++ F M G+ PD+ TL S++SSC+++ L G
Sbjct: 336 MTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEG 395
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + +T+ N+L+ +Y KCG+++ + +F + K+ V+W ++ A
Sbjct: 396 AQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQF 455
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E I +FE M A GL PD++TF G+LSACS +GLVE G F M + GI P H
Sbjct: 456 GKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDH 515
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CM+DL R G + EA + I K+P PDA+ W LL +C+ +GN+++GK + L+EL
Sbjct: 516 YTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELD 575
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+++ YVLLS++Y+ +W+++ ++RK M D G++K S I+ + F DDK++
Sbjct: 576 PHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSN 635
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
S IYS +++L + GY
Sbjct: 636 PFSDQIYSELEKLNYKMIKEGY 657
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++++SW S+I+ Q G +A+++F M + + D T S+L++C + L G
Sbjct: 235 MRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEG 294
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H YI + ++ + ++L+ MY KC +++A +F M KNVVSW ++ +
Sbjct: 295 KQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN 354
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA++ F M+ G+ PD+ T ++S+C++ +E G F + T G+ +
Sbjct: 355 GYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGA-QFHARALTSGLISFITV 413
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+V L G+ G + ++ L ++ K D V W AL+ FG + + +L G
Sbjct: 414 SNALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGYAQFGKANETIGLFESMLAHG 472
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 127/311 (40%), Gaps = 76/311 (24%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS--GVMPDNATLVSILSSCSHMGDLA 59
MP ++ VSWNS+IS + G ++++ + M + + + T ++L S G +
Sbjct: 101 MPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNRITFSTLLILASKRGCVK 160
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVV---------- 109
LG++ H ++ V + + L++MY+K G + A +F +P+KNVV
Sbjct: 161 LGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLM 220
Query: 110 ---------------------SWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
SW +I +G ++AI++F +M+ L D+ TF
Sbjct: 221 RCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGS 280
Query: 149 LLSACS--------------------------HSGLVEM---------GRYYFGLMSSTF 173
+L+AC S LVEM F M+
Sbjct: 281 VLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCK- 339
Query: 174 GISPDVAHYACMVDLLGRGGFLGEAM---SLIQKLPMKPDAVVWGALLGACKTFGNLEMG 230
+V + M+ G+ G+ EA+ S +QK ++PD G+++ +C +LE G
Sbjct: 340 ----NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEG 395
Query: 231 KQILKQLLELG 241
Q + L G
Sbjct: 396 AQFHARALTSG 406
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 93/232 (40%), Gaps = 47/232 (20%)
Query: 47 SILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK 106
++L C + K H +I L N+L++ YAK G++ A +F MP
Sbjct: 14 ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHP 73
Query: 107 NVVSWNVIIGALALHGSGKEAIEMFEKM-RASG--------------------------- 138
N+ SWN I+ A + G E +F+ M R G
Sbjct: 74 NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133
Query: 139 -----LFPDEITFTGLLSACSHSGLVEMGRYY------FGLMSSTFGISPDVAHYACMVD 187
+ + ITF+ LL S G V++GR FG MS F SP +VD
Sbjct: 134 KNDGSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSP-------LVD 186
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ + G + A + +LP K + V++ L+ G +E K++ ++ E
Sbjct: 187 MYSKMGMISCARKVFDELPEK-NVVMYNTLIMGLMRCGRVEDSKRLFFEMRE 237
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 190/322 (59%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN VSW +++ + Q G EA++ F M G+ PD+ TL S++SSC+++ L G
Sbjct: 345 MTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEG 404
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + +T+ N+L+ +Y KCG+++ + +F + K+ V+W ++ A
Sbjct: 405 AQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQF 464
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E I +FE M A GL PD++TF G+LSACS +GLVE G F M + GI P H
Sbjct: 465 GKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDH 524
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CM+DL R G + EA + I K+P PDA+ W LL +C+ +GN+++GK + L+EL
Sbjct: 525 YTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELD 584
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+++ YVLLS++Y+ +W+++ ++RK M D G++K S I+ + F DDK++
Sbjct: 585 PHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSN 644
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
S IYS +++L + GY
Sbjct: 645 PFSDQIYSELEKLNYKMIKEGY 666
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++++SW S+I+ Q G +A+++F M + + D T S+L++C + L G
Sbjct: 244 MRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEG 303
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H YI + ++ + ++L+ MY KC +++A +F M KNVVSW ++ +
Sbjct: 304 KQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN 363
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA++ F M+ G+ PD+ T ++S+C++ +E G F + T G+ +
Sbjct: 364 GYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGA-QFHARALTSGLISFITV 422
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+V L G+ G + ++ L ++ K D V W AL+ FG + + +L G
Sbjct: 423 SNALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGYAQFGKANETIGLFESMLAHG 481
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 126/307 (41%), Gaps = 68/307 (22%)
Query: 2 MPVKNAVSWNSIISCHVQEG---QHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL 58
MP ++ VSWNS+IS + G Q +A L + S + + T ++L S G +
Sbjct: 110 MPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNL-NRITFSTLLILASKRGCV 168
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVV--------- 109
LG++ H ++ V + + L++MY+K G + A +F +P+KNVV
Sbjct: 169 KLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGL 228
Query: 110 ----------------------SWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFT 147
SW +I +G ++AI++F +M+ L D+ TF
Sbjct: 229 MRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFG 288
Query: 148 GLLSACSHSGLVEMGRYYFGLMSST------FGISP------------------------ 177
+L+AC ++ G+ + T F S
Sbjct: 289 SVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCK 348
Query: 178 DVAHYACMVDLLGRGGFLGEAM---SLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
+V + M+ G+ G+ EA+ S +QK ++PD G+++ +C +LE G Q
Sbjct: 349 NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFH 408
Query: 235 KQLLELG 241
+ L G
Sbjct: 409 ARALTSG 415
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 93/232 (40%), Gaps = 47/232 (20%)
Query: 47 SILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK 106
++L C + K H +I L N+L++ YAK G++ A +F MP
Sbjct: 23 ALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 82
Query: 107 NVVSWNVIIGALALHGSGKEAIEMFEKM-------------------------------- 134
N+ SWN I+ A + G E +F+ M
Sbjct: 83 NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 142
Query: 135 RASGLFP-DEITFTGLLSACSHSGLVEMGRYY------FGLMSSTFGISPDVAHYACMVD 187
+ G F + ITF+ LL S G V++GR FG MS F SP +VD
Sbjct: 143 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSP-------LVD 195
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ + G + A + +LP K + V++ L+ G +E K++ ++ E
Sbjct: 196 MYSKMGMISCARKVFDELPEK-NVVMYNTLIMGLMRCGRVEDSKRLFFEMRE 246
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 190/322 (59%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN VSW +++ + Q G EA++ F M G+ PD+ TL S++SSC+++ L G
Sbjct: 345 MTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEG 404
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + +T+ N+L+ +Y KCG+++ + +F + K+ V+W ++ A
Sbjct: 405 AQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQF 464
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E I +FE M A GL PD++TF G+LSACS +GLVE G F M + GI P H
Sbjct: 465 GKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDH 524
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CM+DL R G + EA + I K+P PDA+ W LL +C+ +GN+++GK + L+EL
Sbjct: 525 YTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELD 584
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+++ YVLLS++Y+ +W+++ ++RK M D G++K S I+ + F DDK++
Sbjct: 585 PHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSN 644
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
S IYS +++L + GY
Sbjct: 645 PFSDQIYSELEKLNYKMIKEGY 666
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++++SW S+I+ Q G +A+++F M + + D T S+L++C + L G
Sbjct: 244 MRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEG 303
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H YI + ++ + ++L+ MY KC +++A +F M KNVVSW ++ +
Sbjct: 304 KQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN 363
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA++ F M+ G+ PD+ T ++S+C++ +E G F + T G+ +
Sbjct: 364 GYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGA-QFHARALTSGLISFITV 422
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+V L G+ G + ++ L ++ K D V W AL+ FG + + +L G
Sbjct: 423 SNALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGYAQFGKANETIGLFESMLAHG 481
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 126/307 (41%), Gaps = 68/307 (22%)
Query: 2 MPVKNAVSWNSIISCHVQEG---QHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL 58
MP ++ VSWNS+IS + G Q +A L + S + + T ++L S G +
Sbjct: 110 MPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNL-NRITFSTLLILASKRGCV 168
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVV--------- 109
LG++ H ++ V + + L++MY+K G + A +F +P+KNVV
Sbjct: 169 KLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGL 228
Query: 110 ----------------------SWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFT 147
SW +I +G ++AI++F +M+ L D+ TF
Sbjct: 229 MRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFG 288
Query: 148 GLLSACSHSGLVEMGRYYFGLMSST------FGISP------------------------ 177
+L+AC ++ G+ + T F S
Sbjct: 289 SVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCK 348
Query: 178 DVAHYACMVDLLGRGGFLGEAM---SLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
+V + M+ G+ G+ EA+ S +QK ++PD G+++ +C +LE G Q
Sbjct: 349 NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFH 408
Query: 235 KQLLELG 241
+ L G
Sbjct: 409 ARALTSG 415
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 93/232 (40%), Gaps = 47/232 (20%)
Query: 47 SILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK 106
++L C + K H +I L N+L++ YAK G++ A +F MP
Sbjct: 23 ALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 82
Query: 107 NVVSWNVIIGALALHGSGKEAIEMFEKM-------------------------------- 134
N+ SWN I+ A + G E +F+ M
Sbjct: 83 NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 142
Query: 135 RASGLFP-DEITFTGLLSACSHSGLVEMGRYY------FGLMSSTFGISPDVAHYACMVD 187
+ G F + ITF+ LL S G V++GR FG MS F SP +VD
Sbjct: 143 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSP-------LVD 195
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ + G + A + +LP K + V++ L+ G +E K++ ++ E
Sbjct: 196 MYSKMGMISCARKVFDELPEK-NVVMYNTLIMGLMRCGRVEDSKRLFFEMRE 246
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/323 (39%), Positives = 195/323 (60%), Gaps = 2/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ +WN++I ++G EA+ LF RM GV + +++S+LS C+ + L G
Sbjct: 295 MKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHG 354
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + + + + + L+ MY KCG L A IF K+VV WN +I + H
Sbjct: 355 RQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQH 414
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+EA+ +F M +SG+ PDE+TF G+LSACS+SG V+ G F M T+ + P + H
Sbjct: 415 GLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEH 474
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YACMVDLLGR G + EAM L++K+PM+PDA+VWGALLGAC+ L++ + +++L +L
Sbjct: 475 YACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLE 534
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFM-VDDKN 300
++G YVLLS+MY+ RW D++ +RK +N I K S IE++ + F D K+
Sbjct: 535 PKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVI-KFPGCSWIEVEKKVHMFTGGDSKS 593
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H I M+++L L+ GY
Sbjct: 594 HPEQHMITQMLEKLSGFLREAGY 616
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 46/287 (16%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP +N VSW S++ +VQEG EA +LF M V+ + +L S + D
Sbjct: 108 VMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKE-SRIDD--- 163
Query: 61 GKKAHDYICDNNITV---------------------------SVTLCNSLMNMYAKCGAL 93
KK D I + ++ V +V ++++ YAK G +
Sbjct: 164 AKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRV 223
Query: 94 QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
A +F MP++N VSW ++ G KEA E+FE M + + ++
Sbjct: 224 DVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWI----VACNEMILQF 279
Query: 154 SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV 213
+G + R F M D + M+ + R G EA+ L ++ + A+
Sbjct: 280 GLAGEMHRARMMFEGMKER-----DEGTWNAMIKVFERKGLDLEALGLFARMQREGVALN 334
Query: 214 WGAL---LGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMY 255
+ ++ L C + +L+ G+Q+ +L+ +D LYV +L MY
Sbjct: 335 FPSMISVLSVCASLASLDHGRQVHARLVR-SEFDQDLYVASVLITMY 380
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 48/238 (20%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + SWN+++S + + + +A+ LF +M + N ++S G +A
Sbjct: 47 LPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVSFNG----MISGYVKNGMVADA 102
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+K D + + N+ VS T S++ Y + G ++ A +F+ MP++NVVSW V+IG L
Sbjct: 103 RKVFDVMPERNV-VSWT---SMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKE 158
Query: 122 -------------------------------GSGKEAIEMFEKMRASGLFPDEITFTGLL 150
G EA E+F++M+ +F T+T ++
Sbjct: 159 SRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVF----TWTTMV 214
Query: 151 SACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK 208
S + +G V++ R F +M +S + M+ + G + EA L + +P+K
Sbjct: 215 SGYAKNGRVDVARKLFEVMPERNEVS-----WTAMLMGYTQSGRMKEAFELFEAMPVK 267
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 100/226 (44%), Gaps = 14/226 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V+N +W +++S + + G+ A +LF VMP+ + + MG G
Sbjct: 202 MKVRNVFTWTTMVSGYAKNGRVDVARKLF------EVMPERN---EVSWTAMLMGYTQSG 252
Query: 62 KKAHDYICDNNITVS-VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ + + V + CN ++ + G + A +F GM +++ +WN +I
Sbjct: 253 RMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFER 312
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR-YYFGLMSSTFGISPDV 179
G EA+ +F +M+ G+ + + +LS C+ ++ GR + L+ S F D+
Sbjct: 313 KGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEF--DQDL 370
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
+ ++ + + G L A + + K D V+W +++ G
Sbjct: 371 YVASVLITMYVKCGDLVRAKGIFNRFLFK-DVVMWNSMITGYSQHG 415
>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
| 20130731
Length = 596
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/327 (38%), Positives = 194/327 (59%), Gaps = 8/327 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS----GVMPDNATLVSILSSCSHMGD 57
MP +N VSW+ +I +VQ G+ E++ LF R V GV ++ TL S+L C
Sbjct: 182 MPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGV--NDFTLSSVLRVCGGSTL 239
Query: 58 LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
L +G+ H + S + +SL+++Y+KCG ++ A D+F + +N+ WN ++ A
Sbjct: 240 LQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIA 299
Query: 118 LALHGSGKEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
A H + E+F+KM++ G+ + ITF +L ACSH+GLVE G+YYF LM +GI
Sbjct: 300 CAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKD-YGIE 358
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
P HY+ MVDLLGR G L +A+ LI+++PM+P VWGALL C+ GN ++ + +
Sbjct: 359 PGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADR 418
Query: 237 LLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMV 296
+ ELG SGL+V+LSN Y+ + RW++ K RK+M D GIKK +S +E + F
Sbjct: 419 VSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAA 478
Query: 297 DDKNHEVSTSIYSMVDQLMDHLKSVGY 323
D++H S IY +D+L + + GY
Sbjct: 479 GDRSHAKSVEIYDKLDELGEEMDKAGY 505
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 140/291 (48%), Gaps = 8/291 (2%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P K+A +W+S+IS Q ++ F M GV PD+ S SC + L + K
Sbjct: 82 PHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAK 141
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H + + + + +S+++MYAKCG + A ++F MP +NVVSW+ +I G
Sbjct: 142 MLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLG 201
Query: 123 SGKEAIEMFEK--MRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL-MSSTFGISPDV 179
E++ +F++ + ++ T + +L C S L++MGR GL ++F S V
Sbjct: 202 EDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFV 261
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
A + ++ L + G + EA + +++ ++ + +W A+L AC + + ++ ++
Sbjct: 262 A--SSLISLYSKCGVVEEAYDVFEEVTVR-NLGMWNAMLIACAQHAHTDKTFELFDKMKS 318
Query: 240 LGRYDSGLYVLLSNMY--SESQRWDDMKKIRKIMNDSGIKKCRAISSIEID 288
+G + L +Y S + + K ++M D GI+ S +D
Sbjct: 319 VGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVD 369
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 194/324 (59%), Gaps = 1/324 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSC-SHMGDLA 59
++ K+ ++W+++++ + Q G+ EA +LF ++ G+ P+ T S++++C S
Sbjct: 453 IIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAE 512
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
GK+ H Y + ++ + ++L+ MYAK G + +A ++F ++++VSWN +I +
Sbjct: 513 QGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYS 572
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG K+A+E+F++M+ + D +TF G+++AC+H+GLVE G+ YF M + I+P +
Sbjct: 573 QHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTM 632
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY+CM+DL R G L +AM +I ++P P A VW LLGA + N+E+G+ ++L+
Sbjct: 633 KHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLIS 692
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
L DS YVLLSNMY+ + W + +RK+M+ +KK S IE+ Y F+ D
Sbjct: 693 LQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDL 752
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
H +S IYS + +L LK GY
Sbjct: 753 THPLSNQIYSKLSELSIRLKDAGY 776
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 122/243 (50%), Gaps = 7/243 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N VSW S+++ + G + ELFC+M GV+P+ T+ +++++ + G + +G
Sbjct: 154 MGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIG 213
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + ++ + NSL+++Y++ G L+ A D+F M ++ V+WN +I +
Sbjct: 214 LQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRN 273
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM---SSTFGISPD 178
G E E+F KM+ +G+ P +TF ++ +C + L E+ LM + G + D
Sbjct: 274 GQDLEVFEIFNKMQLAGVKPTHMTFASVIKSC--ASLRELA--LVKLMQCKALKSGFTTD 329
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
++ L + + +A+SL + + V W A++ C G + + Q+
Sbjct: 330 QIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMR 389
Query: 239 ELG 241
G
Sbjct: 390 REG 392
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 108/220 (49%), Gaps = 3/220 (1%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
N ++ + ++ Q EA+ LF + S + PD +TL + + C+ D LG++ H
Sbjct: 62 NQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVK 121
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEM 130
+ V++ SL++MY K + +F M ++NVVSW ++ + +G E+
Sbjct: 122 FGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWEL 181
Query: 131 FEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLG 190
F +M+ G+ P+ T + +++A + G+V +G M G + + ++ L
Sbjct: 182 FCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHA-MVVKHGFEEAIPVFNSLISLYS 240
Query: 191 RGGFLGEAMSLIQKLPMKPDAVVWGALL-GACKTFGNLEM 229
R G L +A + K+ ++ D V W +++ G + +LE+
Sbjct: 241 RLGMLRDARDVFDKMEIR-DWVTWNSMIAGYVRNGQDLEV 279
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 116/238 (48%), Gaps = 15/238 (6%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN VSW ++IS +Q G + +A+ LF +M GV P++ T +IL+ + +
Sbjct: 360 KNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILT----VHYPVFVSEM 415
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + N S ++ +L++ Y K G A+ +F + K++++W+ ++ A G
Sbjct: 416 HAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGET 475
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSAC-SHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+EA ++F ++ G+ P+E TF+ +++AC S + E G+ + + I + +
Sbjct: 476 EEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHA-----YAIKMRLNNAL 530
Query: 184 C----MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
C +V + + G + A + ++ + D V W +++ G + ++ ++
Sbjct: 531 CVSSALVTMYAKRGNIDSAHEVFKRQKER-DLVSWNSMISGYSQHGQAKKALEVFDEM 587
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/323 (36%), Positives = 191/323 (59%), Gaps = 1/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N ++W +++ Q G A++LFCRM V ++ TLVS++ C+H+G L G
Sbjct: 401 MEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKG 460
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFF-GMPQKNVVSWNVIIGALAL 120
+ H ++ + + ++L++MYAKCG + +A +F+ G K+V+ N +I +
Sbjct: 461 RSVHGHLIRHGYEFNAVNMSALIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSMIMGYGM 520
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G +A+ ++++M L P++ TF +L+ACSHSGLVE GR F M I P
Sbjct: 521 HGQGHQALRVYDRMIDERLKPNQTTFVSMLTACSHSGLVEEGRTLFHCMERVHNIKPSDK 580
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYAC VDLL R G+L EA +L++++P++P V ALLG C+ N+ MG QI +L+ L
Sbjct: 581 HYACFVDLLSRAGYLEEAYALVKQIPVEPSIDVLEALLGGCRIHKNINMGIQIADRLISL 640
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
++G+YV+LSN+YSE++RW+ + IR +M G+KK A S E+ + F D +
Sbjct: 641 DYLNTGIYVMLSNIYSEARRWESVNYIRGLMRKRGLKKTPAFSLTEVGNQVFTFFAGDDS 700
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H +I +++ L +++ GY
Sbjct: 701 HPGWENIKQLLENLRLEVEASGY 723
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 111/201 (55%), Gaps = 1/201 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ +SWN++IS VQ G E+ LF ++ SG D+ TLVS++ CS DL G
Sbjct: 300 MCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDLENG 359
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H I + ++ L ++++MY+KCGA++ A D+F M ++NV++W ++ L+ +
Sbjct: 360 KVLHACIIRKGLESNLVLSTAIVDMYSKCGAIKQASDVFRTMEKRNVITWTAMLVGLSQN 419
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G + A+++F +M+ + + +T L+ C+H G ++ GR G + G + +
Sbjct: 420 GYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRSVHGHLIR-HGYEFNAVN 478
Query: 182 YACMVDLLGRGGFLGEAMSLI 202
+ ++D+ + G + A L
Sbjct: 479 MSALIDMYAKCGKIHSAEKLF 499
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 2/217 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ V WNSII +VQEG E ++LF M G+ P + T+ SIL +C G LG
Sbjct: 199 MPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLG 258
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H ++ + V + SL++MY G ++A +F M ++++SWN +I +
Sbjct: 259 TCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQN 318
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E+ +F K+ SG D T L+ CS + +E G+ + G+ ++
Sbjct: 319 GMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRK-GLESNLVL 377
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+VD+ + G + +A + + + K + + W A+L
Sbjct: 378 STAIVDMYSKCGAIKQASDVFRTME-KRNVITWTAML 413
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 7/289 (2%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P + + N+++ ++ ++ E +LF M + + ++ T V L +C+ + D +G
Sbjct: 99 PHRETILCNAMMGGFLKNMEYKEVPKLFKMMGLRDIELNSYTCVFGLKACTVLLDDEVGM 158
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ + + +S++N KCG L A +F GMP+++VV WN IIG G
Sbjct: 159 ELVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEG 218
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR--YYFGLMSSTFGISPDVA 180
KE I++F +M + G+ P +T +L AC SG ++G + F L G+ DV
Sbjct: 219 LLKEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLGTCVHVFVL---ALGMGDDVF 275
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+VD+ G A + ++ + + W A++ C G + + +L++
Sbjct: 276 VLTSLVDMYCNVGDTESAFLVFNRMCSR-SLISWNAMISGCVQNGMVPESFSLFHKLVQS 334
Query: 241 GR-YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEID 288
G +DSG V L S++ ++ K + + G++ +S+ +D
Sbjct: 335 GDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVD 383
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 119/323 (36%), Positives = 188/323 (58%), Gaps = 12/323 (3%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVS----------GVMPDNATLVSILSSCSH 54
++ +WN++IS Q G +E + LF M + G P+ T+V +LS+C H
Sbjct: 196 RDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGH 255
Query: 55 MGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVI 114
G L LGK H Y+ + V + N+L++MY KCG+L+ A +F +K + SWN +
Sbjct: 256 GGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSLELARKVFEMDQRKGLTSWNSM 315
Query: 115 IGALALHGSGKEAIEMFEKMR--ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST 172
I ALHG ++AI FEKM G+ PDE+TF GLL+AC+H GLVE G YF +M
Sbjct: 316 INCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKE 375
Query: 173 FGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
+GI P +AHY C++DLLGR G EAM +++ + M+PD VVWG+LL CK G ++ +
Sbjct: 376 YGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEF 435
Query: 233 ILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCY 292
K+L+E+ ++ G +L+N+Y + +WD+M+ + + K S IE+D +
Sbjct: 436 AAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPGCSWIEVDDKVH 495
Query: 293 QFMVDDKNHEVSTSIYSMVDQLM 315
QF D+++ + +Y++++ L
Sbjct: 496 QFFSLDQSNPKTEELYNILESLF 518
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 189/322 (58%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + V+W ++IS V+ G+ +A+ + +M ++GV PD T +++ +CS + L G
Sbjct: 561 IPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQG 620
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H I N + SL++MYAKCG ++ A +F M ++V WN +I LA H
Sbjct: 621 KQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQH 680
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ +EA+ F +M++ G+ PD +TF G+LSACSHSGL F M T+G+ P++ H
Sbjct: 681 GNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEH 740
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+C+VD L R G + EA ++ +P + A ++ LL AC+ G+ E G+++ ++L +
Sbjct: 741 YSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMD 800
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
DS YVLLSN+Y+ + +W++ R +M +KK S I++ + F+ D++H
Sbjct: 801 PSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSH 860
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
E + IY+ V+ +M +K GY
Sbjct: 861 EETDLIYNKVEYVMKRIKEEGY 882
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 44/301 (14%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN +S ++Q G+ EA++ F M S V D+ T + ILS + + L LGK+ H +
Sbjct: 265 WNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVV 324
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
V++ NS +NMY K G++ A +F M + +++SWN +I A G + ++
Sbjct: 325 RFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLR 384
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST----FGISPDVAHYACM 185
+F + SGL PD+ T T +L AC S L E Y G T GI D +
Sbjct: 385 LFIDLLRSGLLPDQFTITSVLRAC--SSLEE--SYCVGRQVHTCALKAGIVLDSFVSTAL 440
Query: 186 VDLLGRGGFLGEA----------------------------------MSLIQKLPMKPDA 211
+D+ +GG + EA SL+ + K D
Sbjct: 441 IDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQ 500
Query: 212 VVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIM 271
+ + A L+ GKQI ++++ R+ L+V +S + + +MK RK+
Sbjct: 501 ITFANAAKAAGCLVRLQQGKQIHAVVIKM-RFHYDLFV-ISGILDMYLKCGEMKSARKVF 558
Query: 272 N 272
N
Sbjct: 559 N 559
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 4/234 (1%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
SWN+++ + EA+ LF M G D T + + + L GK+ H +
Sbjct: 467 SWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVV 526
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ + + +++MY KCG +++A +F +P + V+W +I +G ++A+
Sbjct: 527 IKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQAL 586
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY-YFGLMSSTFGISPDVAHYACMVD 187
+ +MR +G+ PDE TF L+ ACS +E G+ + +M P V +VD
Sbjct: 587 FTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVM--TSLVD 644
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ + G + +A L +++ + A +W A++ GN E ++ G
Sbjct: 645 MYAKCGNIEDAYGLFRRMNTRSVA-LWNAMIVGLAQHGNAEEALNFFNEMKSRG 697
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 137/305 (44%), Gaps = 37/305 (12%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD-LALGKKAHD 66
+SWN++IS + G ++ LF + SG++PD T+ S+L +CS + + +G++ H
Sbjct: 364 ISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHT 423
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
I + + +L+++Y+K G ++ A +F ++ SWN ++ + + +E
Sbjct: 424 CALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYRE 483
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMGRYYF--------- 166
A+ +F M G D+ITF A H+ +++M R+++
Sbjct: 484 ALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKM-RFHYDLFVISGIL 542
Query: 167 ------GLMSSTFGI-----SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM---KPDAV 212
G M S + SPD + ++ G +A+ ++ + +PD
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEY 602
Query: 213 VWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIM 271
+ L+ AC LE GKQI +++L +D + L +MY++ +D + + M
Sbjct: 603 TFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM 662
Query: 272 NDSGI 276
N +
Sbjct: 663 NTRSV 667
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 31 CRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKC 90
C + S ++P SIL DL LGK+ H I + + + N+L+ MYAKC
Sbjct: 5 CSVSPSSLLPQ---WFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKC 61
Query: 91 GALQTAMDIFFGMPQ--KNVVSWNVIIGALA----LHGSGK--EAIEMFEKMRASGLFPD 142
G+L +A +F PQ +++V++N I+ A A LH K EA +F +R S +
Sbjct: 62 GSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTT 121
Query: 143 EITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLI 202
T + L C G G + G+ DV +V++ + + EA L
Sbjct: 122 RHTLSPLFKLCLLYGSPSASEALQGY-AVKIGLQWDVFVAGALVNIYAKFQRIREARVLF 180
Query: 203 QKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
++P++ D V+W ++ K + + G ++L
Sbjct: 181 DRMPVR-DVVLWNVMM---KAYVEMGAGDEVL 208
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 133/314 (42%), Gaps = 25/314 (7%)
Query: 5 KNAVSWNSIISCHVQEGQ------HAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL 58
++ V++N+I++ + G+ EA +F + S ++ TL + C G
Sbjct: 79 RDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSP 138
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
+ + Y + V + +L+N+YAK ++ A +F MP ++VV WNV++ A
Sbjct: 139 SASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAY 198
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G+G E + +F SGL PD ++ +L + E ++ + D
Sbjct: 199 VEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDD 258
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQ------KLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
+ L GE + K + D++ + +L + +LE+GKQ
Sbjct: 259 DSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQ 318
Query: 233 ILKQLLELGRYDSGLYVLLS--NMYSES-------QRWDDMKKIRKIMNDSGIKKCRAIS 283
I ++ G +D + V S NMY ++ + + MK++ I ++ I C A S
Sbjct: 319 IHGAVVRFG-WDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGC-ARS 376
Query: 284 SIEIDGCCYQFMVD 297
+E C + +D
Sbjct: 377 GLE--ECSLRLFID 388
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 189/322 (58%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + V+W ++IS V+ G+ +A+ + +M ++GV PD T +++ +CS + L G
Sbjct: 561 IPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQG 620
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H I N + SL++MYAKCG ++ A +F M ++V WN +I LA H
Sbjct: 621 KQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQH 680
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ +EA+ F +M++ G+ PD +TF G+LSACSHSGL F M T+G+ P++ H
Sbjct: 681 GNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEH 740
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+C+VD L R G + EA ++ +P + A ++ LL AC+ G+ E G+++ ++L +
Sbjct: 741 YSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMD 800
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
DS YVLLSN+Y+ + +W++ R +M +KK S I++ + F+ D++H
Sbjct: 801 PSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSH 860
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
E + IY+ V+ +M +K GY
Sbjct: 861 EETDLIYNKVEYVMKRIKEEGY 882
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 44/301 (14%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN +S ++Q G+ EA++ F M S V D+ T + ILS + + L LGK+ H +
Sbjct: 265 WNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVV 324
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
V++ NS +NMY K G++ A +F M + +++SWN +I A G + ++
Sbjct: 325 RFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLR 384
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST----FGISPDVAHYACM 185
+F + SGL PD+ T T +L AC S L E Y G T GI D +
Sbjct: 385 LFIDLLRSGLLPDQFTITSVLRAC--SSLEE--SYCVGRQVHTCALKAGIVLDSFVSTAL 440
Query: 186 VDLLGRGGFLGEA----------------------------------MSLIQKLPMKPDA 211
+D+ +GG + EA SL+ + K D
Sbjct: 441 IDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQ 500
Query: 212 VVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIM 271
+ + A L+ GKQI ++++ R+ L+V +S + + +MK RK+
Sbjct: 501 ITFANAAKAAGCLVRLQQGKQIHAVVIKM-RFHYDLFV-ISGILDMYLKCGEMKSARKVF 558
Query: 272 N 272
N
Sbjct: 559 N 559
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 4/234 (1%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
SWN+++ + EA+ LF M G D T + + + L GK+ H +
Sbjct: 467 SWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVV 526
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ + + +++MY KCG +++A +F +P + V+W +I +G ++A+
Sbjct: 527 IKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQAL 586
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY-YFGLMSSTFGISPDVAHYACMVD 187
+ +MR +G+ PDE TF L+ ACS +E G+ + +M P V +VD
Sbjct: 587 FTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVM--TSLVD 644
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ + G + +A L +++ + A +W A++ GN E ++ G
Sbjct: 645 MYAKCGNIEDAYGLFRRMNTRSVA-LWNAMIVGLAQHGNAEEALNFFNEMKSRG 697
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 137/305 (44%), Gaps = 37/305 (12%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD-LALGKKAHD 66
+SWN++IS + G ++ LF + SG++PD T+ S+L +CS + + +G++ H
Sbjct: 364 ISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHT 423
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
I + + +L+++Y+K G ++ A +F ++ SWN ++ + + +E
Sbjct: 424 CALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYRE 483
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMGRYYF--------- 166
A+ +F M G D+ITF A H+ +++M R+++
Sbjct: 484 ALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKM-RFHYDLFVISGIL 542
Query: 167 ------GLMSSTFGI-----SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM---KPDAV 212
G M S + SPD + ++ G +A+ ++ + +PD
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEY 602
Query: 213 VWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIM 271
+ L+ AC LE GKQI +++L +D + L +MY++ +D + + M
Sbjct: 603 TFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM 662
Query: 272 NDSGI 276
N +
Sbjct: 663 NTRSV 667
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 31 CRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKC 90
C + S ++P SIL DL LGK+ H I + + + N+L+ MYAKC
Sbjct: 5 CSVSPSSLLPQ---WFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKC 61
Query: 91 GALQTAMDIFFGMPQ--KNVVSWNVIIGALA----LHGSGK--EAIEMFEKMRASGLFPD 142
G+L +A +F PQ +++V++N I+ A A LH K EA +F +R S +
Sbjct: 62 GSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTT 121
Query: 143 EITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLI 202
T + L C G G + G+ DV +V++ + + EA L
Sbjct: 122 RHTLSPLFKLCLLYGSPSASEALQGY-AVKIGLQWDVFVAGALVNIYAKFQRIREARVLF 180
Query: 203 QKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
++P++ D V+W ++ K + + G ++L
Sbjct: 181 DRMPVR-DVVLWNVMM---KAYVEMGAGDEVL 208
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 133/314 (42%), Gaps = 25/314 (7%)
Query: 5 KNAVSWNSIISCHVQEGQ------HAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL 58
++ V++N+I++ + G+ EA +F + S ++ TL + C G
Sbjct: 79 RDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSP 138
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
+ + Y + V + +L+N+YAK ++ A +F MP ++VV WNV++ A
Sbjct: 139 SASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAY 198
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G+G E + +F SGL PD ++ +L + E ++ + D
Sbjct: 199 VEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDD 258
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQ------KLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
+ L GE + K + D++ + +L + +LE+GKQ
Sbjct: 259 DSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQ 318
Query: 233 ILKQLLELGRYDSGLYVLLS--NMYSES-------QRWDDMKKIRKIMNDSGIKKCRAIS 283
I ++ G +D + V S NMY ++ + + MK++ I ++ I C A S
Sbjct: 319 IHGAVVRFG-WDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGC-ARS 376
Query: 284 SIEIDGCCYQFMVD 297
+E C + +D
Sbjct: 377 GLE--ECSLRLFID 388
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 189/322 (58%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + V+W ++IS V+ G+ +A+ + +M ++GV PD T +++ +CS + L G
Sbjct: 561 IPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQG 620
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H I N + SL++MYAKCG ++ A +F M ++V WN +I LA H
Sbjct: 621 KQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQH 680
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ +EA+ F +M++ G+ PD +TF G+LSACSHSGL F M T+G+ P++ H
Sbjct: 681 GNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEH 740
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+C+VD L R G + EA ++ +P + A ++ LL AC+ G+ E G+++ ++L +
Sbjct: 741 YSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMD 800
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
DS YVLLSN+Y+ + +W++ R +M +KK S I++ + F+ D++H
Sbjct: 801 PSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSH 860
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
E + IY+ V+ +M +K GY
Sbjct: 861 EETDLIYNKVEYVMKRIKEEGY 882
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 44/301 (14%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN +S ++Q G+ EA++ F M S V D+ T + ILS + + L LGK+ H +
Sbjct: 265 WNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVV 324
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
V++ NS +NMY K G++ A +F M + +++SWN +I A G + ++
Sbjct: 325 RFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLR 384
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST----FGISPDVAHYACM 185
+F + SGL PD+ T T +L AC S L E Y G T GI D +
Sbjct: 385 LFIDLLRSGLLPDQFTITSVLRAC--SSLEE--SYCVGRQVHTCALKAGIVLDSFVSTAL 440
Query: 186 VDLLGRGGFLGEA----------------------------------MSLIQKLPMKPDA 211
+D+ +GG + EA SL+ + K D
Sbjct: 441 IDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQ 500
Query: 212 VVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIM 271
+ + A L+ GKQI ++++ R+ L+V +S + + +MK RK+
Sbjct: 501 ITFANAAKAAGCLVRLQQGKQIHAVVIKM-RFHYDLFV-ISGILDMYLKCGEMKSARKVF 558
Query: 272 N 272
N
Sbjct: 559 N 559
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 4/234 (1%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
SWN+++ + EA+ LF M G D T + + + L GK+ H +
Sbjct: 467 SWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVV 526
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ + + +++MY KCG +++A +F +P + V+W +I +G ++A+
Sbjct: 527 IKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQAL 586
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY-YFGLMSSTFGISPDVAHYACMVD 187
+ +MR +G+ PDE TF L+ ACS +E G+ + +M P V +VD
Sbjct: 587 FTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVM--TSLVD 644
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ + G + +A L +++ + A +W A++ GN E ++ G
Sbjct: 645 MYAKCGNIEDAYGLFRRMNTRSVA-LWNAMIVGLAQHGNAEEALNFFNEMKSRG 697
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 137/305 (44%), Gaps = 37/305 (12%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD-LALGKKAHD 66
+SWN++IS + G ++ LF + SG++PD T+ S+L +CS + + +G++ H
Sbjct: 364 ISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHT 423
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
I + + +L+++Y+K G ++ A +F ++ SWN ++ + + +E
Sbjct: 424 CALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYRE 483
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMGRYYF--------- 166
A+ +F M G D+ITF A H+ +++M R+++
Sbjct: 484 ALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKM-RFHYDLFVISGIL 542
Query: 167 ------GLMSSTFGI-----SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM---KPDAV 212
G M S + SPD + ++ G +A+ ++ + +PD
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEY 602
Query: 213 VWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIM 271
+ L+ AC LE GKQI +++L +D + L +MY++ +D + + M
Sbjct: 603 TFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM 662
Query: 272 NDSGI 276
N +
Sbjct: 663 NTRSV 667
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 31 CRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKC 90
C + S ++P SIL DL LGK+ H I + + + N+L+ MYAKC
Sbjct: 5 CSVSPSSLLPQ---WFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKC 61
Query: 91 GALQTAMDIFFGMPQ--KNVVSWNVIIGALA----LHGSGK--EAIEMFEKMRASGLFPD 142
G+L +A +F PQ +++V++N I+ A A LH K EA +F +R S +
Sbjct: 62 GSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTT 121
Query: 143 EITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLI 202
T + L C G G + G+ DV +V++ + + EA L
Sbjct: 122 RHTLSPLFKLCLLYGSPSASEALQGY-AVKIGLQWDVFVAGALVNIYAKFQRIREARVLF 180
Query: 203 QKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
++P++ D V+W ++ K + + G ++L
Sbjct: 181 DRMPVR-DVVLWNVMM---KAYVEMGAGDEVL 208
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 133/314 (42%), Gaps = 25/314 (7%)
Query: 5 KNAVSWNSIISCHVQEGQ------HAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL 58
++ V++N+I++ + G+ EA +F + S ++ TL + C G
Sbjct: 79 RDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSP 138
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
+ + Y + V + +L+N+YAK ++ A +F MP ++VV WNV++ A
Sbjct: 139 SASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAY 198
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G+G E + +F SGL PD ++ +L + E ++ + D
Sbjct: 199 VEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDD 258
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQ------KLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
+ L GE + K + D++ + +L + +LE+GKQ
Sbjct: 259 DSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQ 318
Query: 233 ILKQLLELGRYDSGLYVLLS--NMYSES-------QRWDDMKKIRKIMNDSGIKKCRAIS 283
I ++ G +D + V S NMY ++ + + MK++ I ++ I C A S
Sbjct: 319 IHGAVVRFG-WDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGC-ARS 376
Query: 284 SIEIDGCCYQFMVD 297
+E C + +D
Sbjct: 377 GLE--ECSLRLFID 388
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 177/268 (66%), Gaps = 1/268 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P+KN W ++I + Q + EA++LF RM V G P+ ATL S+LS C+ G L LG
Sbjct: 200 IPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLSVCARSGCLELG 259
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H+++ + V V L +L+ MYAK G + TA +F MP++NVV+WN +I LA H
Sbjct: 260 ERIHEFMRVKGVEVGVILGTALVYMYAKNGDILTARKLFDEMPERNVVTWNAMICGLASH 319
Query: 122 GSGKEAIEMFEKMRASGLF-PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G ++A+ +FE M+ + P+ +TF G+LSAC H+GL+++GR F M GI P +
Sbjct: 320 GHVEDALGLFECMKEEEIVVPNAVTFVGVLSACCHAGLIDVGREVFCSMKVVHGIEPTIE 379
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVDLLGRGG L EA +I+ +P KPD V+ GALL A K GN E+ ++++KQ+L L
Sbjct: 380 HYGCMVDLLGRGGKLLEAEEVIKGMPWKPDVVILGALLAASKNNGNTEVAERVVKQILTL 439
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIR 268
++ G++V LSNMY+E+ +W ++ ++R
Sbjct: 440 DPHNHGVHVSLSNMYAEAGQWQEVSRLR 467
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD-LALGKKA 64
N+ WN++I H Q+ H ++ L+ +M GV+P T +L +CS + + L K+
Sbjct: 103 NSFMWNTLIRAHQQQQPHI-SLSLYIQMRRHGVIPGKHTFPFLLKACSSLSNVLPHCKQV 161
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ + + N L+ Y+ G L A +F +P KN+ W +I A +
Sbjct: 162 HAHVVKFGLCFDCHVGNGLVRGYSVSGDLVDARYVFDEIPMKNLSLWTTMICGYAQNCCY 221
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA+++FE+M G P+ T +LS C+ SG +E+G M G+ V
Sbjct: 222 NEALDLFERMVVVGFEPNGATLASVLSVCARSGCLELGERIHEFMRVK-GVEVGVILGTA 280
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
+V + + G + A L ++P + + V W A++ + G++E
Sbjct: 281 LVYMYAKNGDILTARKLFDEMPER-NVVTWNAMICGLASHGHVE 323
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 187/314 (59%), Gaps = 1/314 (0%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN++IS + + G EA+ELF M + PD+ TL S + +C+ +G L L + DY+
Sbjct: 316 WNAMISGYAKNGHAEEAVELFQAMISRNIKPDSITLRSAVLACAQVGSLKLAQWMDDYVR 375
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + + +L++MYAKCG++++A +F K+VV W+ +I LHG G EAI
Sbjct: 376 KSKYGGDIFVNTTLIDMYAKCGSVESARLVFDRASVKDVVMWSAMIMGYGLHGQGWEAIY 435
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLL 189
++ M+ G+ P+++TF GLL+ACSHSGL++ G F M FGI P HY+C+VDLL
Sbjct: 436 LYHAMKQEGVCPNDVTFIGLLTACSHSGLIKQGWELFHCMRD-FGIKPRNEHYSCVVDLL 494
Query: 190 GRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV 249
GR G+L +A I K+P++P VWGALL ACK + +G+ ++L L Y++G YV
Sbjct: 495 GRAGYLKQAYVFILKMPIEPGVSVWGALLSACKIHRCVTLGEYAAQKLFSLDPYNTGHYV 554
Query: 250 LLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSIYS 309
LSN+Y+ S+ WD + IR +M + G+ K S I+I+ + F D +H + I+
Sbjct: 555 QLSNLYASSRMWDRVAYIRVLMKEKGLTKYLGYSVIDINEKLHTFHAGDMSHPQAKEIFY 614
Query: 310 MVDQLMDHLKSVGY 323
+ + LK VG+
Sbjct: 615 ELQRQERRLKEVGF 628
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 127/292 (43%), Gaps = 37/292 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
P + WN+II + + + +E++ M G+ PD T +L +CS + D L
Sbjct: 105 FPDPDLFMWNAIIRTYSRNNMYRNVIEMYRWMKWVGLHPDKFTFPCVLKACSELLDFGLS 164
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H ++ V + N L+ +YAKCG + A +F + + +VSW I+ +
Sbjct: 165 CLVHAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQN 224
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDV- 179
G EA+ MF++MR + + PD I+ ++ A + +E GR G ++ PD+
Sbjct: 225 GEPWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPDLL 284
Query: 180 ----AHYA-------------------------CMVDLLGRGGFLGEAMSLIQKL---PM 207
A YA M+ + G EA+ L Q + +
Sbjct: 285 ISLTAFYAKCGEVTVAKSFFDKMKTPNKVMMWNAMISGYAKNGHAEEAVELFQAMISRNI 344
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSE 257
KPD++ + + AC G+L++ Q + + +Y ++V L +MY++
Sbjct: 345 KPDSITLRSAVLACAQVGSLKLA-QWMDDYVRKSKYGGDIFVNTTLIDMYAK 395
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 44/266 (16%)
Query: 47 SILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK 106
S++ + +H+ L + H+ + + + + L L+N + G + A +F P
Sbjct: 52 SLIDNSTHITHLY---QVHNQLVLSGLQHNRFLMTKLVNQSSNLGQIFYARKLFDEFPDP 108
Query: 107 NVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH------SGLVE 160
++ WN II + + + IEM+ M+ GL PD+ TF +L ACS S LV
Sbjct: 109 DLFMWNAIIRTYSRNNMYRNVIEMYRWMKWVGLHPDKFTFPCVLKACSELLDFGLSCLVH 168
Query: 161 MGRYYFGLMSSTFGISPDVAHYA------------------------CMVDLLGRGGFLG 196
+G S F + VA YA +V G+ G
Sbjct: 169 AHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPW 228
Query: 197 EAMSL---IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLS 252
EA+ + ++K +KPD + +++ A +LE G+ + ++++G + L + L+
Sbjct: 229 EALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPDLLISLT 288
Query: 253 NMYSE-------SQRWDDMKKIRKIM 271
Y++ +D MK K+M
Sbjct: 289 AFYAKCGEVTVAKSFFDKMKTPNKVM 314
>Medtr4g074470.1 | PPR containing plant-like protein | HC |
chr4:28370337-28367680 | 20130731
Length = 542
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 170/276 (61%), Gaps = 7/276 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +NAVSWNS+I+ V +A A+ELF M +GV P TL+SIL +C+ G L +G
Sbjct: 247 MPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIG 306
Query: 62 KKAHD--YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
K ++ +C++ I L N+L+NMY KCG L A +IF GM K V WN ++ LA
Sbjct: 307 HKIYESLKVCEHKI--ESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVIGLA 364
Query: 120 LHGSGKEAIEMFEKMRAS---GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
+HG +E ++F +M S + PD +TF G+L ACSH GLV+ R+YF M + I
Sbjct: 365 VHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIV 424
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
PD HY CMVDLL R G L EA +I P + V+W LLGAC+T N E+ + KQ
Sbjct: 425 PDSKHYGCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQ 484
Query: 237 LLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMN 272
L +L + G YVLLSN+Y+E+ RWD+++++R M+
Sbjct: 485 LAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMD 520
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 110/235 (46%), Gaps = 15/235 (6%)
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
DL ++ DY+ + +V N+L+ Y + G +Q A +F MP++N VSWN +I
Sbjct: 201 DLVNDYESADYLLELMPCKTVVSWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIA 260
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG-RYYFGLMSSTFGI 175
A+E+F +M+ +G+ P E+T +L AC+ +G +E+G + Y L I
Sbjct: 261 GCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHKIYESLKVCEHKI 320
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
+ + +V++ + G L A + + MK + W A++ G E Q+
Sbjct: 321 ESYLGN--ALVNMYCKCGNLSLAWEIFNGMKMKTVS-CWNAMVIGLAVHGYCEEVFQLFT 377
Query: 236 QLLE-LG---RYDS----GLYVLLSNM-YSESQRW--DDMKKIRKIMNDSGIKKC 279
++ E LG R D G+ V S+ + RW D M K KI+ DS C
Sbjct: 378 EMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDSKHYGC 432
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 28/232 (12%)
Query: 25 EAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITV--------- 75
+A+ ++ +M ++ V+ D+ T +L +CS L + D D+N+ V
Sbjct: 91 QALLIYNQMLINNVVSDSYTCNFVLKACSRAYKLIQESGSCD---DDNLVVVYNKGTEIH 147
Query: 76 ----------SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
++ NSL+ Y++CG + A +F + ++VSWN++I A L +
Sbjct: 148 CRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARHLFDQIKDTSLVSWNIMISAYDLVNDYE 207
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
A + E M + +++ L++ G V+ R FG M +S + C
Sbjct: 208 SADYLLELMPCKTV----VSWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGC- 262
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
V + G L E S +Q +KP V ++LGAC G LE+G +I + L
Sbjct: 263 VSVRDYAGAL-ELFSEMQNAGVKPTEVTLISILGACAETGALEIGHKIYESL 313
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 171/269 (63%), Gaps = 1/269 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ + WN++IS H+ + EA+ LF M + P+ ATLV +LS+CSH+ L G++
Sbjct: 479 RDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERL 538
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H YI + +++ L +L++MYAKCG L+ + ++F M +K+V+ WN +I ++G
Sbjct: 539 HRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYA 598
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+ AIE+F M S + P+EITF LLSAC+H+GLVE G+ F M S + + P++ HY C
Sbjct: 599 ESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQS-YSVKPNLKHYTC 657
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLLGR L EA L+ +P+ PD VWGALL ACKT +EMG +I K ++ +
Sbjct: 658 MVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPEN 717
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMND 273
G Y++++NMYS RWD+ + +R+ M D
Sbjct: 718 DGYYIMVANMYSSIGRWDEAENVRRTMKD 746
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 113/230 (49%), Gaps = 3/230 (1%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN +I + + G++ + ++LF M G+ ++ +VS ++SC +G++ LG+ H +
Sbjct: 384 WNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVI 443
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ ++++ NSL+ MY KC + + I F +++V+ WN +I A +EAI
Sbjct: 444 KGFVDETISVTNSLIEMYGKCDKMNVSWRI-FNRSERDVILWNALISAHIHVKHYEEAIS 502
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLL 189
+F+ M P+ T +LSACSH +E G ++ G ++ +VD+
Sbjct: 503 LFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEK-GFKLNLPLGTALVDMY 561
Query: 190 GRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ G L ++ + + M+ D + W A++ G E +I + E
Sbjct: 562 AKCGQLEKSREVFDSM-MEKDVICWNAMISGYGMNGYAESAIEIFNLMEE 610
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG---VMPDNATLVSILSSCSHMGDL 58
+PV++ V+W +++ +VQ G+ +E M G P+ TL +C ++GDL
Sbjct: 172 IPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDL 231
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
G+ H + N I + + +S+++MY KCG + A F + K+++SW +I
Sbjct: 232 VSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVY 291
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
A G + + F +M + + PD + +LS +S V G+ + GL+ +PD
Sbjct: 292 ARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRH-YAPD 350
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQK 204
++ + + G L A L Q+
Sbjct: 351 EMVDNSLLSMYCKFGMLSFAERLFQR 376
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 99/216 (45%), Gaps = 4/216 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ +SW S+I + + G ++ + F M + V PD + ILS + D+ GK
Sbjct: 279 KDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAF 338
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I + + NSL++MY K G L A + F Q ++ WN +I G
Sbjct: 339 HGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFA-ERLFQRSQGSIEYWNFMIVGYGRIGKN 397
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+ I++F +M+ G+ + + +++C G + +GR + F + ++
Sbjct: 398 VKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGF-VDETISVTNS 456
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
++++ G+ + + + + + D ++W AL+ A
Sbjct: 457 LIEMYGKCDKMNVSWRIFNR--SERDVILWNALISA 490
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 104/242 (42%), Gaps = 6/242 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K+ WNS + + + + + M V+P++ T + SS +H + G
Sbjct: 70 LPFKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSG 129
Query: 62 KKAHDYICD-NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
H C + + +S +++Y++C + A+ +F +P ++VV+W ++
Sbjct: 130 MNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQ 189
Query: 121 HGSGKEAIEMFEKMRASG---LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
+G + +E +M G P+ T G AC + G + GR GL+ GI
Sbjct: 190 NGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKN-GIGC 248
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ + ++ + + G EA ++ + D + W +++ FG + + ++
Sbjct: 249 LLDIQSSVLSMYCKCGVPREAYQSFSEV-INKDLLSWTSMIRVYARFGMMSDCVRFFWEM 307
Query: 238 LE 239
LE
Sbjct: 308 LE 309
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 75/176 (42%), Gaps = 9/176 (5%)
Query: 74 TVSVTLCNS--------LMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
V+VT NS L+++Y ++ +F +P K+ WN + L
Sbjct: 33 AVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLYP 92
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
+ + + MR+ + P+ TF + S+ +H ++ G L + A +
Sbjct: 93 QFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSSF 152
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
V L R + +A+ + ++P++ D V W AL+ G EMG + + ++ +G
Sbjct: 153 VSLYSRCDEMNDAVKVFDEIPVR-DVVAWTALVIGYVQNGESEMGLECISEMYRVG 207
>Medtr4g108030.1 | PPR containing plant-like protein | HC |
chr4:44776233-44777913 | 20130731
Length = 544
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 170/276 (61%), Gaps = 7/276 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +NAVSWNS+I+ V +A A+ELF M +GV P TL+SIL +C+ G L +G
Sbjct: 249 MPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIG 308
Query: 62 KKAHD--YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
K ++ +C++ I L N+L+NMY KCG L A +IF GM K V WN ++ LA
Sbjct: 309 HKIYESLKVCEHKI--ESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVIGLA 366
Query: 120 LHGSGKEAIEMFEKMRAS---GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
+HG +E ++F +M S + PD +TF G+L ACSH GLV+ R+YF M + I
Sbjct: 367 VHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIV 426
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
PD HY CMVDLL R G L EA +I P + V+W LLGAC+T N E+ + KQ
Sbjct: 427 PDSKHYGCMVDLLTRRGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQ 486
Query: 237 LLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMN 272
L +L + G YVLLSN+Y+E+ RWD+++++R M+
Sbjct: 487 LAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMD 522
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 42/296 (14%)
Query: 23 HAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDN-----NITVS- 76
+ + E+ CR+ G D + S+L S G +++ + D I D NI +S
Sbjct: 142 YNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARYLFDQIKDTSLVSWNIMISA 201
Query: 77 ---------------------VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVII 115
V N+L+ Y + G +Q A +F MP++N VSWN +I
Sbjct: 202 YDRVDDYELADHLLELMPCKTVISWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMI 261
Query: 116 GALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG-RYYFGLMSSTFG 174
A+E+F +M+ +G+ P E+T +L AC+ +G +E+G + Y L
Sbjct: 262 AGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHKIYESLKVCEHK 321
Query: 175 ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
I + + +V++ + G L A + + MK + W A++ G E Q+
Sbjct: 322 IESYLGN--ALVNMYCKCGNLSLAWEIFNGMKMKTVS-CWNAMVIGLAVHGYCEEVFQLF 378
Query: 235 KQLLE-LG---RYDS----GLYVLLSNM-YSESQRW--DDMKKIRKIMNDSGIKKC 279
++ E LG R D G+ V S+ + RW D M K KI+ DS C
Sbjct: 379 TEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDSKHYGC 434
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 194/327 (59%), Gaps = 3/327 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ +WN+II+ + Q G + +A+ L +M V V+P+ TL SIL +CS MG + L ++
Sbjct: 491 RDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQL 550
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + +V + SL + Y+KCGA+ A ++F P+KN V++ ++ HG G
Sbjct: 551 HGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMG 610
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
K A+ +++ M SG+ PD +TF +LSAC++SGLV+ G F M I P + HY C
Sbjct: 611 KRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCC 670
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAV-VWGALLGACKTFGNLEMGKQILKQLLELG-- 241
+ D+LGR G + EA ++ L + + +WG+LLG+C+ G+ E+GK + K+LL +G
Sbjct: 671 VADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRNHGHFELGKAVAKKLLNMGMD 730
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ +G +VLLSN+Y+E W+ + ++RK M + G+ K S +EI G F+ D+ H
Sbjct: 731 KRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETGCSWVEIAGFVNCFVSRDEKH 790
Query: 302 EVSTSIYSMVDQLMDHLKSVGYPCKHS 328
S+ IY M+D L +K GY ++S
Sbjct: 791 PQSSEIYYMLDMLTLDMKYAGYKPQYS 817
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 137/279 (49%), Gaps = 41/279 (14%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVS--GVMPDNATLVSILSSCSHMGDLALGK 62
KN WN++I +VQ EA+++F + S GV D+ TL+S+L++ S + + L +
Sbjct: 287 KNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVC-DDVTLLSVLTAVSQLQQIKLAE 345
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ H ++ + + + N++M MY++C + T++ +F M +++ VSWN II A +G
Sbjct: 346 QFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNG 405
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMGRYYFGLMSS 171
+EA+ + +M+ D +T T LLSA S H+ L+ G + G+ S
Sbjct: 406 FDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGMESY 465
Query: 172 TFGI--------------------SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK--- 208
+ D A + ++ + G +A+ L++++ ++
Sbjct: 466 LIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVI 525
Query: 209 PDAVVWGALLGACKTFGNLEMGKQI----LKQLLELGRY 243
P+AV ++L AC + G++ + +Q+ +++ LE Y
Sbjct: 526 PNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVY 564
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMP--DNATLVSILSSCSHMGDLA 59
+P + V WNS+I + +A+ L+ +M + D T S L +C+ D+
Sbjct: 75 LPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKACALTKDIL 134
Query: 60 LGKKAHDYI----CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVII 115
GK H + + N S + NSL+NMYA C + A+++F M ++NVV+WN +I
Sbjct: 135 TGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNVFDVMRRRNVVAWNTLI 193
Query: 116 GALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
+ +A+E F M + P +TF L A S G + ++G M FG
Sbjct: 194 LSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRK-FG 251
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M +N V+WN++I V+ ++ +A+E F M VMP T V++ + S +GD
Sbjct: 180 VMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRT 239
Query: 61 GKKAHDYICD--NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
K + ++ + V + +S + M++ G + A +F KN WN +I A
Sbjct: 240 VKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAY 299
Query: 119 ALHGSGKEAIEMF-EKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG--- 174
+ EAI++F + + + D++T +L+A S +++ + + +
Sbjct: 300 VQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSL 359
Query: 175 ---------------------------ISPDVAHYACMVDLLGRGGFLGEAMSLI---QK 204
+ D + ++ + GF EA+ L+ QK
Sbjct: 360 IIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQK 419
Query: 205 LPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSES 258
D+V ALL A NL +GKQ L+ G G+ L +MY++S
Sbjct: 420 QKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGMESYLIDMYAKS 473
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P KN+V++ +++ C+ Q G A+ L+ M SG+ PD T V+ILS+C++ G + G
Sbjct: 590 PEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGL 649
Query: 63 KAHDYICD-NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ--KNVVSWNVIIGALA 119
+ + + + I S+ + +M + G + A + G+ + + W ++G+
Sbjct: 650 QIFESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCR 709
Query: 120 LHG 122
HG
Sbjct: 710 NHG 712
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 193/321 (60%), Gaps = 4/321 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLAL 60
MP KN +SWN++I + Q G+ +A++LFC M + V + T+VS+L + + + L L
Sbjct: 277 MPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDL 336
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G H ++ N + SV +CN+L++MYAKCG + A +F M +K+ SWN +I +
Sbjct: 337 GGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGV 396
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G KEA+E+F M G P++IT T +LSAC+H GLVE GR F M FGI P +
Sbjct: 397 NGCAKEALEVFAMMLREGFEPNQITMTSVLSACNHCGLVEEGRRCFEAMER-FGIVPQIE 455
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CM+DLLGR G L EA LIQ +P P+ ++ + L AC F ++ ++ILK +++
Sbjct: 456 HYGCMIDLLGRAGRLDEAEKLIQAMPYDPNEIILTSFLFACCYFEDVSRAERILKVAVKM 515
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ +G YV+L N+Y+ +RW D++ ++++M G K A S IE+DG +F+ +
Sbjct: 516 EKEGAGDYVMLRNLYATERRWADVEDVKEMMKKRGSNKEVAWSVIEVDGRFREFVAGYYS 575
Query: 301 HEVS--TSIYSMVDQLMDHLK 319
H S +I S + QL H+K
Sbjct: 576 HSHSHLEAIQSTLGQLWKHMK 596
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 119/243 (48%), Gaps = 15/243 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V++ VSW ++I + + G EA +LF M V D A ++ MG + L
Sbjct: 184 MSVRSLVSWTAVIVGYARCGDMVEARKLFDGM----VDRDVAAFNVMIDGYVKMGRMDLA 239
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ D + N+ +S T S+++ Y++ G + A +F MP+KNV+SWN +I +
Sbjct: 240 RDLFDKMRVKNV-ISWT---SMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQN 295
Query: 122 GSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G +A+++F +MR + + +E+T +L A + +++G + G + D +
Sbjct: 296 GRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRN---QLDGS 352
Query: 181 HYAC--MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ C +VD+ + G +G+A + +++ K D W AL+ G + ++ +L
Sbjct: 353 VHVCNALVDMYAKCGEIGKAKLVFEEMTEK-DTGSWNALINGYGVNGCAKEALEVFAMML 411
Query: 239 ELG 241
G
Sbjct: 412 REG 414
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 16/217 (7%)
Query: 11 NSIISCHVQEGQHAEAMEL---FCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
N+II+ H Q L F + C P + T IL CS G + H
Sbjct: 91 NTIINAHFSLRQFNHGFTLYNQFSKDCF--FRPSSYTFTLILKGCSVSDAKRQGFQIHGV 148
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ N + + + SL++MY K G + A +F M +++VSW +I A G EA
Sbjct: 149 VLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGDMVEA 208
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
++F+ M + D F ++ G +++ R F M +V + MV
Sbjct: 209 RKLFDGM----VDRDVAAFNVMIDGYVKMGRMDLARDLFDKMR-----VKNVISWTSMVH 259
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALL-GACKT 223
G + EA L +P K + + W A++ G C+
Sbjct: 260 GYSEDGDVDEARFLFDCMPEK-NVLSWNAMIRGYCQN 295
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 184/318 (57%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V W SII+ +VQ G + + L+ +M + V+P+ T+ S+L +CS + L GK+ H
Sbjct: 385 DVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMH 444
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
I + V + ++L MY KCG+L IF+ MP ++V+SWN +I L+ +G G
Sbjct: 445 ARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGN 504
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
+A+E+FEKM G+ PD +TF LLSACSH GLV+ G YF +M F I+P V HYACM
Sbjct: 505 KALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACM 564
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
VD+L R G L EA I+ + +W LLGACK N E+G ++L+ELG +S
Sbjct: 565 VDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPES 624
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
YVLLS++Y+ ++++++R+IM G+ K S IE+ G + F+V D H
Sbjct: 625 SAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVD 684
Query: 306 SIYSMVDQLMDHLKSVGY 323
I ++ L + GY
Sbjct: 685 EIRLELELLTKLMIDEGY 702
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 134/268 (50%), Gaps = 33/268 (12%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN+++W+++++ + Q G +A++LF +M SGV+P TLV ++++CS + + GK+
Sbjct: 283 KNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQM 342
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + + + +++++MYAKCG+L A F + Q +VV W II +G
Sbjct: 343 HSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDY 402
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG--------RYYFGL-------M 169
+ + ++ KM+ + P+E+T +L ACS ++ G +Y F L +
Sbjct: 403 EGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSAL 462
Query: 170 SSTFG---------------ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM---KPDA 211
S+ + S DV + M+ L + G +A+ L +K+ + KPD
Sbjct: 463 SAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDP 522
Query: 212 VVWGALLGACKTFGNLEMGKQILKQLLE 239
V + LL AC G ++ G + K + +
Sbjct: 523 VTFVNLLSACSHMGLVDRGWEYFKMMFD 550
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 143/299 (47%), Gaps = 40/299 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSW ++IS + +A+E+F M + + L S+LS+ + + G
Sbjct: 179 MPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTG 238
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H N + V++ N+L+ MYAKCG+L A+ F KN ++W+ ++ A
Sbjct: 239 RQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQG 298
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMGRYYFGL-- 168
G +A+++F KM +SG+ P E T G+++ACS HS ++G FGL
Sbjct: 299 GDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLG---FGLQL 355
Query: 169 --MSSTFGI------------------SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK 208
+S+ + PDV + ++ + G ++L K+ M+
Sbjct: 356 YVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQME 415
Query: 209 ---PDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDD 263
P+ + ++L AC + L+ GKQ+ ++++ G + + + LS MY++ DD
Sbjct: 416 RVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDD 474
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 6/237 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAE---AMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
K+ VSWNS+I+ Q + A+ LF RM + V+P+ TL + S+ S++ D+
Sbjct: 77 KDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVA 136
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+AH + V + +SL+NMY K G + A +F MP++N VSW +I A
Sbjct: 137 GKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYAS 196
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+A+E+FE MR +E T +LSA + V GR L G+ V+
Sbjct: 197 SDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKN-GLLAIVS 255
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+V + + G L +A+ + +++ W A++ G+ + ++ ++
Sbjct: 256 VANALVTMYAKCGSLDDAVRTFE-FSGDKNSITWSAMVTGYAQGGDSDKALKLFNKM 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 8/185 (4%)
Query: 40 PDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDI 99
P + L+ L C+H ++ G+ H I S+ + N+ +N+YAK L A+ +
Sbjct: 9 PQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68
Query: 100 FFGM--PQKNVVSWNVIIGALALHGSGKE---AIEMFEK-MRASGLFPDEITFTGLLSAC 153
F + K+ VSWN +I A + + S AI +F + MRA+ + P+ T G+ SA
Sbjct: 69 FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAA 128
Query: 154 SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV 213
S+ V G+ + T G S DV + ++++ + GF+ +A L ++P + + V
Sbjct: 129 SNLSDVVAGKQAHSVAVKT-GCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPER-NTVS 186
Query: 214 WGALL 218
W ++
Sbjct: 187 WATMI 191
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ +SWN++IS Q G +A+ELF +M + G+ PD T V++LS+CSHMG + G
Sbjct: 482 MPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRG 541
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMD-IFFGMPQKNVVSWNVIIGALA 119
+ + D NI V ++++ ++ G L A + I + W +++GA
Sbjct: 542 WEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACK 601
Query: 120 LHGSGKEAIEMFEKM 134
H + + + EK+
Sbjct: 602 NHRNYELGVYAGEKL 616
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 194/322 (60%), Gaps = 1/322 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+PVK+ VSWN++I + Q EA+ELF M PD+ T+ +L +C+ + L G
Sbjct: 458 IPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKG 516
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H +I + + +L++MYAKCG L A +F +P+K+++SW V+I +H
Sbjct: 517 REIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMH 576
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G EAI F +MR +G+ PDE +F+ +L+ACSHSGL+ G +F M + G+ P + H
Sbjct: 577 GFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEH 636
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YAC+VDLL R G L +A I+ +P+KPD +WG LL C+ ++++ +++ + + EL
Sbjct: 637 YACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELE 696
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
++ YV+L+N+Y+E+++W+++KK+RK M G K+ S IE+ G F+ + H
Sbjct: 697 PDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKH 756
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+ I ++ +L +++ Y
Sbjct: 757 PQAKKIDVLLSKLTMQMQNEDY 778
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 7/222 (3%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
VSW SII+ +V+EG +++A+ LF M GV PD T+ SI+ +C+ L G+ H Y
Sbjct: 363 VSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSY 422
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ N + ++ + N+L+NMYAKCG+++ A +F +P K++VSWN +IG + + EA
Sbjct: 423 VIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEA 482
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC-MV 186
+E+F M+ PD+IT +L AC+ ++ GR G + G D+ H AC +V
Sbjct: 483 LELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRR-GYFSDL-HVACALV 539
Query: 187 DLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG--ACKTFGN 226
D+ + G L A L +P K D + W ++ FGN
Sbjct: 540 DMYAKCGLLVLAQLLFDMIP-KKDLISWTVMIAGYGMHGFGN 580
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 120/214 (56%), Gaps = 2/214 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ VSWNS+I+ V G +E+F +M + GV D TLVS+L +C+++G+L+LG+ H
Sbjct: 260 DVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALH 319
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ + V N+L++MY+KCG L A ++F M +VSW II A G
Sbjct: 320 GFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYS 379
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
+AI +F++M++ G+ PD T T ++ AC+ S ++ GR + G+ ++ +
Sbjct: 380 DAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN-GMGSNLPVTNAL 438
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
+++ + G + EA + K+P+K D V W ++G
Sbjct: 439 INMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIG 471
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 105/215 (48%), Gaps = 10/215 (4%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN ++S + + G E++ LF +M GV+ + T +L + +G + K+ H Y+
Sbjct: 163 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVL 222
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + NSL+ Y K G +++A ++F + + +VVSWN +I ++G +E
Sbjct: 223 KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLE 282
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI----SPDVAHYACM 185
+F +M G+ D T +L AC++ G + +GR G FG+ S +V +
Sbjct: 283 IFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHG-----FGVKACFSEEVVFSNTL 337
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+D+ + G L A + K+ V W +++ A
Sbjct: 338 LDMYSKCGNLNGATEVFVKMG-DTTIVSWTSIIAA 371
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 47 SILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK 106
S+L C+ L GK+ H I N I+V L L+ MY CG L IF +
Sbjct: 99 SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 158
Query: 107 NVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF 166
V WN+++ A G+ +E++ +F+KM+ G+ + TFT +L + G V+ +
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 218
Query: 167 GLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
G + G + A ++ + G + A +L +L +PD V W +++ C G
Sbjct: 219 GYVLK-LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNGF 276
Query: 227 LEMGKQILKQLLELG 241
G +I Q+L LG
Sbjct: 277 SGNGLEIFIQMLILG 291
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M+P K+ +SW +I+ + G EA+ F M ++G+ PD ++ +IL++CSH G L
Sbjct: 557 MIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNE 616
Query: 61 GKKAHDYICDNNITVSVTLCN--SLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGA 117
G K + + N V L + ++++ A+ G L A MP K + W V++
Sbjct: 617 GWKFFNSM-RNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 675
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLS 151
+H K A ++ E + L PD + +L+
Sbjct: 676 CRIHHDVKLAEKVAEHIFE--LEPDNTRYYVVLA 707
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 19/198 (9%)
Query: 43 ATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG 102
A LV + +C GDL G+K D I ++ V L N LM+ YAK G + ++ +F
Sbjct: 133 AKLVFMYVNC---GDLVQGRKIFDKIMND----KVFLWNLLMSEYAKIGNFRESVSLFKK 185
Query: 103 MPQKNVV----SWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGL 158
M + VV ++ ++ A G KE + + G + L++A G
Sbjct: 186 MQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGG 245
Query: 159 VEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK---LPMKPDAVVWG 215
VE F +S PDV + M++ GF G + + + L ++ D
Sbjct: 246 VESAHNLFDELS-----EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLV 300
Query: 216 ALLGACKTFGNLEMGKQI 233
++L AC GNL +G+ +
Sbjct: 301 SVLVACANIGNLSLGRAL 318
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 186/304 (61%), Gaps = 4/304 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSW ++IS + G EA+ELF ++ G+ PD +V+ LS+C+ +G L LG
Sbjct: 315 MGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELG 374
Query: 62 KKAHDYICDNNITVSVT--LCNSLMNMYAKCGALQTAMDIFFGMP--QKNVVSWNVIIGA 117
++ H N T S+ +++++MYAKCG++ A+D+F +K +N II
Sbjct: 375 RRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISG 434
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
LA HG G+ A +FE+M GL PD ITF +LSAC H GLV+ G+ F M + +G+SP
Sbjct: 435 LAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSP 494
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++ HY CMVDLLGR G L EA LI K+P K +AV+W ALL ACK G++ + + +L
Sbjct: 495 EMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALARVASYEL 554
Query: 238 LELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
+EL YV+LSNM S++ + D+ +RK +++ GI+K S +E++ ++F+
Sbjct: 555 VELQHDHGAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVEMNRSLHKFLAG 614
Query: 298 DKNH 301
DK+H
Sbjct: 615 DKSH 618
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 132/309 (42%), Gaps = 72/309 (23%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V++ VS+N++I+ ++G + +F M V PD T V++LS CS + D +G++
Sbjct: 181 VRDCVSFNTMINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQ 240
Query: 64 AHDYICDNN--ITVSVTLCNSLMNMYAKCGAL---------------------------- 93
H + +V L N L++MYAKCG L
Sbjct: 241 VHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYA 300
Query: 94 -----QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
+ A +F M +++VVSW +I + G +EA+E+F K+ G+ PDE+
Sbjct: 301 LRGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVA 360
Query: 149 LLSACSHSGLVEMGRY-YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK--- 204
LSAC+ G +E+GR + + S + + +VD+ + G + A+ + +K
Sbjct: 361 ALSACARLGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSD 420
Query: 205 ---------------------------------LPMKPDAVVWGALLGACKTFGNLEMGK 231
L +KPD + + A+L AC G ++ GK
Sbjct: 421 DKKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGK 480
Query: 232 QILKQLLEL 240
++ + + +
Sbjct: 481 KLFESMFTV 489
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 9/237 (3%)
Query: 10 WNSIISCHVQ---EGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSH--MGDLALGKKA 64
WN+II + Q QH LF M S V+PD+ T +L +C++ + G +
Sbjct: 83 WNAIIKAYSQIHSPPQHP--FSLFKTMLNSSVLPDSFTFPFLLKACANVLISAPQFGFQV 140
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ N V + N+L+N Y G + A +F ++ VS+N +I A G
Sbjct: 141 HCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDV 200
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG-ISPDVAHYA 183
+F +MR + PDE TF LLS CS +GR GL+ G +V
Sbjct: 201 SGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVN 260
Query: 184 CMVDLLGRGGFLGEAMSLIQKL-PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+VD+ + G L A +++ + P K W +L+ A G +++ +++ Q+ E
Sbjct: 261 KLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGE 317
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 194/322 (60%), Gaps = 1/322 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+PVK+ VSWN++I + Q EA+ELF M PD+ T+ +L +C+ + L G
Sbjct: 733 IPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKG 791
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H +I + + +L++MYAKCG L A +F +P+K+++SW V+I +H
Sbjct: 792 REIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMH 851
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G EAI F +MR +G+ PDE +F+ +L+ACSHSGL+ G +F M + G+ P + H
Sbjct: 852 GFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEH 911
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YAC+VDLL R G L +A I+ +P+KPD +WG LL C+ ++++ +++ + + EL
Sbjct: 912 YACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELE 971
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
++ YV+L+N+Y+E+++W+++KK+RK M G K+ S IE+ G F+ + H
Sbjct: 972 PDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKH 1031
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+ I ++ +L +++ Y
Sbjct: 1032 PQAKRIDVLLRKLTMQMQNEDY 1053
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 123/222 (55%), Gaps = 7/222 (3%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
VSW S I+ +V+EG +++A+ LF M GV PD T+ SI+ +C+ L G+ H Y
Sbjct: 638 VSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSY 697
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ N + ++ + N+L+NMYAKCG+++ A +F +P K++VSWN +IG + + EA
Sbjct: 698 VIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEA 757
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC-MV 186
+E+F M+ PD+IT +L AC+ ++ GR G + G D+ H AC +V
Sbjct: 758 LELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRR-GYFSDL-HVACALV 814
Query: 187 DLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG--ACKTFGN 226
D+ + G L A L +P K D + W ++ FGN
Sbjct: 815 DMYAKCGLLVLAQLLFDMIP-KKDLISWTVMIAGYGMHGFGN 855
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 118/215 (54%), Gaps = 2/215 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ VSWNS+I+ V G +E+F +M + GV D TLVS+L + +++G+L+LG+ H
Sbjct: 535 DVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALH 594
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ + V N+L++MY+KCG L A ++F M +VSW I A G
Sbjct: 595 GFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYS 654
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
+AI +F++M++ G+ PD T T ++ AC+ S ++ GR + G+ ++ +
Sbjct: 655 DAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN-GMGSNLPVTNAL 713
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+++ + G + EA + K+P+K D V W ++G
Sbjct: 714 INMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG 747
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 9/235 (3%)
Query: 47 SILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK 106
S+L C+ L GK+ H I N I++ L L+ MY CG L IF +
Sbjct: 374 SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433
Query: 107 NVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF 166
V WN+++ A G+ +E++ +F+KM+ G+ + TFT +L + G V+ +
Sbjct: 434 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 493
Query: 167 GLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
G + G + A ++ + G + A +L +L +PD V W +++ C G
Sbjct: 494 GYVLK-LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNGF 551
Query: 227 LEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIR--KIMNDSGIKKC 279
G +I Q+L L G+ V L+ + S W ++ + + ++ G+K C
Sbjct: 552 SGNGLEIFIQMLIL-----GVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKAC 601
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 10/215 (4%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN ++S + + G E++ LF +M GV+ + T +L + +G + K+ H Y+
Sbjct: 438 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVL 497
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + NSL+ Y K G +++A ++F + + +VVSWN +I ++G +E
Sbjct: 498 KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLE 557
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI----SPDVAHYACM 185
+F +M G+ D T +L A ++ G + +GR G FG+ S +V +
Sbjct: 558 IFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHG-----FGVKACFSEEVVFSNTL 612
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+D+ + G L A + K+ V W + + A
Sbjct: 613 LDMYSKCGNLNGATEVFVKMG-DTTIVSWTSTIAA 646
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M+P K+ +SW +I+ + G EA+ F M ++G+ PD ++ IL++CSH G L
Sbjct: 832 MIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNE 891
Query: 61 GKKAHDYICDNNITVSVTLCN--SLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGA 117
G K + + N V L + ++++ A+ G L A MP K + W V++
Sbjct: 892 GWKFFNSM-RNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 950
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLS 151
+H K A ++ E + L PD + +L+
Sbjct: 951 CRIHHDVKLAEKVAEHIFE--LEPDNTRYYVVLA 982
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 173/288 (60%), Gaps = 1/288 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N V+W ++I+ + Q EA+ELF M +PDN LVS+LS+C+ +G+L G
Sbjct: 205 MPQRNEVTWGTMIAGYSQAKLCREAVELFNEMIGLEFIPDNIALVSVLSACAQLGELEQG 264
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ HDYI N I V L L+++YAKCG ++ A + F K+V +WN ++ A+H
Sbjct: 265 RFVHDYITRNGIRVDSYLTTGLVDLYAKCGCVEIARETFESCTNKDVFTWNAMLVGFAIH 324
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G +E F +M G+ PD +TF G+L CSH+GLV R F M + +G++ + H
Sbjct: 325 GQGLVLLEYFSRMVGEGIKPDGVTFLGVLVGCSHAGLVCEARKVFDEMETVYGVAREGKH 384
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CM D+L R G + E+ LI+ +P D WG LLG C+ GN+E+ KQ +Q++E+
Sbjct: 385 YGCMADMLARAGLIEESRELIKGMPNGGDVFAWGGLLGGCRIHGNVEIAKQAAQQVMEIK 444
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMN-DSGIKKCRAISSIEID 288
D G+Y +++N+Y+ +++WDD+ KIRK + + KK S I ++
Sbjct: 445 PEDGGVYSVMANIYANTEQWDDLVKIRKSLGANRRAKKITGTSLIRLN 492
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 33/248 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P ++N++I H A+++F + + D T IL + S + L+L
Sbjct: 73 IPNPTTFTFNTLIRIHTLLSSPLSALKIFLSLRRLFLTLDFHTFPLILKASSQLHSLSLA 132
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYA-------------------------------KC 90
+ H + V + NSL+ +Y+ K
Sbjct: 133 QSLHSQVFKYGFLVDSFVMNSLIRVYSVNDRVNDAYKVFCESGYRDIVSYNVMIDGFVKN 192
Query: 91 GALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
L A ++F MPQ+N V+W +I + +EA+E+F +M PD I +L
Sbjct: 193 FKLDRARELFDEMPQRNEVTWGTMIAGYSQAKLCREAVELFNEMIGLEFIPDNIALVSVL 252
Query: 151 SACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPD 210
SAC+ G +E GR+ ++ GI D +VDL + G + A + K D
Sbjct: 253 SACAQLGELEQGRFVHDYITRN-GIRVDSYLTTGLVDLYAKCGCVEIARETFESCTNK-D 310
Query: 211 AVVWGALL 218
W A+L
Sbjct: 311 VFTWNAML 318
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 191/322 (59%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP N V+WN++++ Q ++ +C M ++G PD T VS++SSCS + L G
Sbjct: 246 MPNCNLVAWNTLMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVISSCSELATLCQG 305
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + + VT+ +SL++MY+KCG+LQ ++ F +++VV W+ +I A H
Sbjct: 306 KQIHAEVIKAGASSVVTVISSLVSMYSKCGSLQDSIKAFLECEERDVVLWSSMIAAYGFH 365
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++AI++F + +E+TF LL ACSHSGL + G +F +M +G+ + H
Sbjct: 366 GQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEH 425
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C+VDLLGR G L EA ++I+ +P+ DA++W LL ACK N EM +++ +++L +
Sbjct: 426 YTCVVDLLGRSGCLEEAETIIRSMPVSADAIIWKTLLSACKIHKNEEMARRVAEEVLRID 485
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
D YVL++ +++ ++RW ++ ++R+ M D +KK +S +E+ +QF + D++H
Sbjct: 486 PQDPASYVLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPGVSWVEVKNQVHQFHMGDESH 545
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
I +++L +K GY
Sbjct: 546 SKFVEINQYLEELTSEMKMQGY 567
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 109/263 (41%), Gaps = 47/263 (17%)
Query: 20 EGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTL 79
+G +A E F + G+ + ++ SC ++LGK+ H I + + +
Sbjct: 60 KGHIKKAFESF----LYGIWTEPRLFSILIQSCIPTNSVSLGKQLHSLIFTSGYSSDKFI 115
Query: 80 CNSLMNMYAKCGALQTAMDIFFGMP-------------------------------QKNV 108
N L+N Y+K G L A+ +F MP ++NV
Sbjct: 116 SNHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNV 175
Query: 109 VSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL 168
+WN ++ L G +EA+ +F +M G PDE +F +L C+H + +G F L
Sbjct: 176 ATWNAMVTGLVKFGLNEEAL-LFSRMNVLGFVPDEYSFGSVLRGCAHLRALSVGD-RFTL 233
Query: 169 MSSTFGIS-----PDVAHYACMVDLLGRGG---FLG--EAMSLIQKLPMKPDAVVWGALL 218
M G P+ A + G+ F G + +++ +PD + + +++
Sbjct: 234 MLRNVGERIIKWMPNCNLVAWNTLMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVI 293
Query: 219 GACKTFGNLEMGKQILKQLLELG 241
+C L GKQI ++++ G
Sbjct: 294 SSCSELATLCQGKQIHAEVIKAG 316
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 192/318 (60%), Gaps = 5/318 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-----VMPDNATLVSILSSCSHMG 56
MP++N S+++++S +V+ G +E ++LF + + + A LVS+L++C+ +G
Sbjct: 177 MPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVG 236
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
GK H Y+ +N + + L +L++ Y KCG ++ A +F MP K+V +W+ +I
Sbjct: 237 AFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMIL 296
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
LA++G+ K A+E+FEKM G P+E+TF G+L+AC+H L FG+MS + I+
Sbjct: 297 GLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNIT 356
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
P + HY C+VD+L R G + +A++ I + ++PD +WG+LL C G+ E+G+++ K
Sbjct: 357 PSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKY 416
Query: 237 LLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMV 296
L+E SG YVLL+NMY+ +W+ + ++RK+M D G+ S IEID ++F
Sbjct: 417 LIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTIHKFFA 476
Query: 297 DDKNHEVSTSIYSMVDQL 314
DDK S IY ++ L
Sbjct: 477 DDKCCLYSREIYDVLSHL 494
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 118/273 (43%), Gaps = 35/273 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL--- 58
+P N +NSII+ + Q + +F +M + + P++ T +++ +C + L
Sbjct: 48 IPNPNIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLEQV 107
Query: 59 -----ALGKKAHDYICDNNITV--------------------SVTLCNSLMNMYAKCGAL 93
LG + Y + I +V SL++ Y CG +
Sbjct: 108 FTLSMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLV 167
Query: 94 QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG----- 148
A D+F MP +N S++ ++ +G E +++F +++ + F G
Sbjct: 168 NEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVS 227
Query: 149 LLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK 208
+L+AC+ G E G++ + G+ D+ ++D + G++ A + K+P+K
Sbjct: 228 VLNACTMVGAFEEGKWIHSYVEEN-GLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVK 286
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
D W A++ GN +M ++ +++ ++G
Sbjct: 287 -DVATWSAMILGLAINGNNKMALELFEKMEKVG 318
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 234 bits (597), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 119/314 (37%), Positives = 188/314 (59%), Gaps = 1/314 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N +WNSI++ V+ Q+ AM+LF M VS + PD T+ IL++CS + + GK+ H
Sbjct: 506 NVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVH 565
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
Y + +L++MYAKCG+++ ++ + N+V N ++ A A+HG G+
Sbjct: 566 AYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGE 625
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
E I +F +M S + PD +TF +LS+C H+G +++G F LM T+ I+P + HY CM
Sbjct: 626 EGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLME-TYNITPTLKHYTCM 684
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
VDLL R G L EA LI+ +PM+ D+V W ALLG C + +G+ ++L+EL ++
Sbjct: 685 VDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNT 744
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
G YVLL+N+Y+ + RW D+ K R++MND G++K S IE + F+ DK+H+
Sbjct: 745 GNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVE 804
Query: 306 SIYSMVDQLMDHLK 319
IY M+D L ++
Sbjct: 805 EIYFMLDNLTKFIR 818
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 136/302 (45%), Gaps = 9/302 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMP--DNATLVSILSSCSHMGDLA 59
M +KN SW +++ H+ G + LF G+ D +L+ C +GDL
Sbjct: 92 MTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLE 151
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
LG++ H + + +V + N+L++MY KCG+L A + GM QK+ VSWN II A
Sbjct: 152 LGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACV 211
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+G EA+++ E M S L P+ +T++ ++ S + F M G++PD
Sbjct: 212 ANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGA-GVAPDA 270
Query: 180 AHYACMVDLLGRGGFL---GEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
A ++ R +L E I + + + V AL+G + G++ K K
Sbjct: 271 RTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDM---KSAFKI 327
Query: 237 LLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMV 296
+ R + Y + Y E+ K++ M G+++ R + I G FM
Sbjct: 328 FSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMF 387
Query: 297 DD 298
DD
Sbjct: 388 DD 389
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 36/255 (14%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ +SWN +IS HV +A+ LF + + G+ PD+ TL SIL+ + M + GK+
Sbjct: 369 RDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEI 428
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + + +L+ MY KC + A F + +++ +WN +I A
Sbjct: 429 HSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQI 488
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+ E+ E+M++ G P+ T+ +L +GLVE +Y +
Sbjct: 489 GKIRELVERMKSDGFEPNVYTWNSIL-----AGLVENKQYDLAM---------------- 527
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+ + +Q ++PD G +L AC + GKQ+ + G YD
Sbjct: 528 ------------QLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAG-YD 574
Query: 245 SGLYV--LLSNMYSE 257
S ++ L +MY++
Sbjct: 575 SDAHIGATLVDMYAK 589
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 7/199 (3%)
Query: 42 NATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFF 101
+ T +IL S + L LGK+ H + + L+ MY+ + + A +F
Sbjct: 34 STTYSTILQSSN---SLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFD 90
Query: 102 GMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFP--DEITFTGLLSACSHSGLV 159
M KN+ SW ++ G + +FE+ GL D F +L+ C G +
Sbjct: 91 KMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDL 150
Query: 160 EMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
E+GR G M G +V ++D+ G+ G L EA +++ + K D V W +++
Sbjct: 151 ELGRQVHG-MVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQK-DCVSWNSIIT 208
Query: 220 ACKTFGNLEMGKQILKQLL 238
AC G + +L+ +L
Sbjct: 209 ACVANGVVYEALDLLENML 227
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 182/269 (67%), Gaps = 2/269 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V+W+++IS +VQ G+ EA+++F M V+PD LVS++S+ S +GDL L ++
Sbjct: 272 KDVVAWSALISGYVQNGEANEALKVFLEMESMKVIPDEFVLVSLMSAASQLGDLKLAQRV 331
Query: 65 HDYICDNNITVSVT-LCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
Y+ +++I + + ++L++M AKCG ++ A+ +F MP++++VS+ +I ++HG
Sbjct: 332 DSYVDNSSIDLQQDYVISALVDMNAKCGNMERALKLFREMPKRDLVSYCSMIHGFSIHGH 391
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
G++A+ +F +M G+ PDE FT +L+ACSHSGLV+ G YF M +GISP H+A
Sbjct: 392 GEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLVDKGWKYFNSMEENYGISPTPDHFA 451
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
CMVDLLGR G L +A LI+ + ++P+A WGAL+GACK G+ E+G+ + +L EL
Sbjct: 452 CMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACKLHGDTELGEIVANRLFELEPQ 511
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMN 272
++ YVLLSN+Y+ + RW D+ +R I+N
Sbjct: 512 NAANYVLLSNIYAAAGRWKDVSLVR-ILN 539
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 117/254 (46%), Gaps = 35/254 (13%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN+ I H Q ++ + F RM G +PD+ T S++ +CS + +GK H +
Sbjct: 83 WNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGSVF 142
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + + +L++MY KCG + A +F + +NVVSW ++ G EA +
Sbjct: 143 RCGLDQDLFVGTTLVDMYGKCGEIGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEAKK 202
Query: 130 MFEKM----------------------RASGLF---PDE--ITFTGLLSACSHSGLVEMG 162
+F++M A G+F P++ ++FT ++ + +G +E
Sbjct: 203 VFDEMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMIDGYAKAGDMESS 262
Query: 163 RYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALLG 219
R+ F + DV ++ ++ + G EA+ + ++ + + PD V +L+
Sbjct: 263 RFLFEQAA-----EKDVVAWSALISGYVQNGEANEALKVFLEMESMKVIPDEFVLVSLMS 317
Query: 220 ACKTFGNLEMGKQI 233
A G+L++ +++
Sbjct: 318 AASQLGDLKLAQRV 331
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VS+ S+I G +A+ LF RM + G++PD A +L++CSH G + G
Sbjct: 371 MPKRDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLVDKG 430
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
K + + +N I+ + ++++ + G L+ A ++ M + N +W +IGA
Sbjct: 431 WKYFNSMEENYGISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACK 490
Query: 120 LHG 122
LHG
Sbjct: 491 LHG 493
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 189/322 (58%), Gaps = 1/322 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N VSWN+I+S +Q+ Q E L+ M SG PD+ T+ ++L +C+ + L +G + H
Sbjct: 435 NLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVH 494
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
Y + + + V++CN L++MYAKCG+L+ A D+F ++VSW+ +I A G G
Sbjct: 495 CYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGH 554
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+ +F M G+ P+E+T+ G LSACSH GLVE G + M + GI P H++C+
Sbjct: 555 EALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCI 614
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
VDLL R G L EA + IQK + D W LL ACKT N+++ ++ +L+L +S
Sbjct: 615 VDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNS 674
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
V+L N+++ + W+++ K+RK+M G++K S IE+ + F +D +H
Sbjct: 675 AAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRN 734
Query: 306 SIYSMVDQLMDHLKSVGY-PCK 326
IY+M+++L + GY PC+
Sbjct: 735 LIYTMLEELWSQVLDDGYDPCQ 756
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 140/287 (48%), Gaps = 8/287 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M + N VSW S+IS + Q GQ +A+ ++ +M SG PD T S++ +C GD+ LG
Sbjct: 126 MQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLG 185
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H ++ + +T N+L++MY G ++ A ++F +P K+++SW +I
Sbjct: 186 RQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQL 245
Query: 122 GSGKEAIEMFEKMRASGLF-PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G EA+ +F + G + P+E F + SACS +E G+ G M FG+ +V
Sbjct: 246 GYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHG-MCVKFGLRRNVF 304
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+ D+ + GFL A ++ PD V W A++ A G+ +Q++ +
Sbjct: 305 AGCSLCDMYAKFGFLPSAKMAFCQIK-NPDIVSWNAIIAAFADNGDANEAIDFFRQMIHI 363
Query: 241 G-RYDSGLYVLLSNMYSESQRWDDMKKIR----KIMNDSGIKKCRAI 282
G DS Y+ L R + ++I KI D I C ++
Sbjct: 364 GLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSL 410
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 130/266 (48%), Gaps = 35/266 (13%)
Query: 11 NSIISCHVQEGQHAEAMELF-CRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
NS I ++ + EA+E F + S + +T S++ +C++ L KK HD++
Sbjct: 33 NSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVL 92
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+N S+ L N ++NMY KCG+++ A +F M NVVSW +I + +G +AI
Sbjct: 93 KSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAII 152
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY--------YFG----------LMSS 171
M+ +M SG FPD++TF ++ AC +G +++GR +FG M +
Sbjct: 153 MYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYT 212
Query: 172 TFG------------ISPDVAHYACMVDLLGRGGFLGEAMSLIQKL----PMKPDAVVWG 215
FG + D+ + M+ + G+ EA+ L + L +P+ ++G
Sbjct: 213 NFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFG 272
Query: 216 ALLGACKTFGNLEMGKQILKQLLELG 241
++ AC + LE GKQ+ ++ G
Sbjct: 273 SVFSACSSLLELEYGKQVHGMCVKFG 298
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 2/221 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV-MPDNATLVSILSSCSHMGDLAL 60
+P K+ +SW ++I+ ++Q G EA+ LF + G P+ S+ S+CS + +L
Sbjct: 227 IPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEY 286
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+ H + +V SL +MYAK G L +A F + ++VSWN II A A
Sbjct: 287 GKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFAD 346
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G EAI+ F +M GL PD IT+ LL C + GR + G ++
Sbjct: 347 NGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVK-IGFDKEIT 405
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
++ + + L +A+++ + + + V W A+L AC
Sbjct: 406 VCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSAC 446
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 40/272 (14%)
Query: 4 VKNA--VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+KN VSWN+II+ G EA++ F +M G+ PD+ T +S+L +C L G
Sbjct: 329 IKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQG 388
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALAL 120
++ H YI +T+CNSL+ MY KC L A+++F + + N+VSWN I+ A
Sbjct: 389 RQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQ 448
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH------------------------- 155
E ++++M SG PD IT T LL C+
Sbjct: 449 KKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSV 508
Query: 156 -SGLVEMG------RYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQ---KL 205
+GL++M ++ + ST + D+ ++ ++ + G EA++L + L
Sbjct: 509 CNGLIDMYAKCGSLKHARDVFDSTQNL--DIVSWSSLIVGYAQCGLGHEALNLFRIMTNL 566
Query: 206 PMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++P+ V + L AC G +E G ++ K +
Sbjct: 567 GVQPNEVTYLGALSACSHIGLVEEGWRLYKSM 598
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 181/305 (59%), Gaps = 2/305 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ +K+ VS+N +I + Q +E++ LF M +SG+ PD + + I+S+C+H+ + G
Sbjct: 499 VSIKDKVSYNILIIGYSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQG 558
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H ++ + NSL+++Y KCG + A +F + K+V SWN +I +
Sbjct: 559 KEIHGHLVRKLFHTHLFAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMILGYGMR 618
Query: 122 GSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G + AI +FE M+ G + D +++ +LSACSH GL+E G YF M + I P
Sbjct: 619 GEFETAINLFEAMKEDGGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQMQD-YNIEPTHT 677
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYACMVDLLGR G + EA +LI+ L +PDA +WGALLGAC+ +GN+E+G + L +L
Sbjct: 678 HYACMVDLLGRAGQIEEAANLIRGLSFEPDANIWGALLGACRIYGNVELGHWAAEHLFKL 737
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
G Y+LLSNMY+E+ RWD+ +R++M G KK S ++I + F+V +K
Sbjct: 738 KPDHCGYYILLSNMYAEAGRWDEANMVRELMKSRGAKKNPGCSWVQIGDQVHGFLVGEKI 797
Query: 301 HEVST 305
+ T
Sbjct: 798 ESLDT 802
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 139/276 (50%), Gaps = 7/276 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N VSWNS+++ Q H A+EL +M G P+N T ++L +C+ +G L +GK+
Sbjct: 402 RNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNVLPACARLGFLNVGKEI 461
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I + L N+L +MY+KCG L A ++ F + K+ VS+N++I + +
Sbjct: 462 HARIIQTGCATDLFLSNALTDMYSKCGHLSLARNV-FNVSIKDKVSYNILIIGYSQTTNS 520
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDVAHYA 183
E++ +F +MR SG+ PD ++F G++SAC+H ++ G+ G L+ F A+
Sbjct: 521 SESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQGKEIHGHLVRKLFHTHLFAAN-- 578
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-- 241
++DL + G + A + ++ K D W ++ G E + + + E G
Sbjct: 579 SLLDLYTKCGRIDLATKVFDRIQHK-DVASWNTMILGYGMRGEFETAINLFEAMKEDGGV 637
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIK 277
YDS Y+ + + S + K K M D I+
Sbjct: 638 EYDSVSYIAVLSACSHGGLIEKGNKYFKQMQDYNIE 673
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 141/301 (46%), Gaps = 37/301 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N VSWN++I+ G +A++ F M +G+ P+ T+ S+L +G LG
Sbjct: 298 MDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLG 357
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y I + + NSL++MYAK G+ + A IF M +N+VSWN ++ A +
Sbjct: 358 MEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQN 417
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
A+E+ +M+A G P+ +TFT +L AC+ G + +G+ + T G + D+
Sbjct: 418 RHHFAAVELLRQMQAHGENPNNVTFTNVLPACARLGFLNVGKEIHARIIQT-GCATDLFL 476
Query: 182 YACMVDLLGRGGFL------------------------------GEAMSLIQKLP---MK 208
+ D+ + G L E+++L ++ M
Sbjct: 477 SNALTDMYSKCGHLSLARNVFNVSIKDKVSYNILIIGYSQTTNSSESLNLFSEMRLSGMT 536
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL--LSNMYSESQRWDDMKK 266
PD V + ++ AC +++ GK+I L+ + + L+ L ++Y++ R D K
Sbjct: 537 PDIVSFIGIISACAHLSSIKQGKEIHGHLVR-KLFHTHLFAANSLLDLYTKCGRIDLATK 595
Query: 267 I 267
+
Sbjct: 596 V 596
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 134/290 (46%), Gaps = 38/290 (13%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG--VMPDNATLVSILSSCSHMGDLALGK 62
++ VSWN++I G H E++ F M V+ V PD T+VS+L C+ ++ + +
Sbjct: 198 RDKVSWNTVIGLCSDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMAR 257
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H Y+ ++ V + N+L+++Y KCG+ + +F M ++N VSWN +I + G
Sbjct: 258 IVHGYVFKVGLSGHVKVGNALVDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRG 317
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+A++ F M +G+ P+ +T + +L GL ++G G S GI D+
Sbjct: 318 LSMDALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLGMEVHGY-SLRMGIESDIFIG 376
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMK---------------------------------- 208
++D+ + G A ++ K+ +
Sbjct: 377 NSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGEN 436
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSE 257
P+ V + +L AC G L +GK+I ++++ G D L L++MYS+
Sbjct: 437 PNNVTFTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLSNALTDMYSK 486
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 5/216 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K A WN++I + G + ++ M SGV PD+ T +L +CS G++
Sbjct: 98 KTAFLWNTLIRAYSIAG-FFDGFGVYNTMVRSGVKPDDHTYPFVLKACSDYLKFDKGREV 156
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + V + N+L+ Y CG AM++F M +++ VSWN +IG + G
Sbjct: 157 HGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGLCSDRGFH 216
Query: 125 KEAIEMFEKM--RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+E++ F++M A + PD +T +L C+ S V M R G + G+S V
Sbjct: 217 EESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFKV-GLSGHVKVG 275
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+VD+ G+ G + ++ + + V W A++
Sbjct: 276 NALVDVYGKCGSEEACKKVFDEMDER-NEVSWNAVI 310
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 178/265 (67%), Gaps = 1/265 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V+W+++IS +VQ G+ EA+++F M V+PD LV ++S+ S +GDL L ++
Sbjct: 272 KDVVTWSALISGYVQNGEANEALKVFLEMESMNVIPDEFVLVGLMSAASQLGDLKLAQRV 331
Query: 65 HDYICDNNITVSVT-LCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
Y+ +N+I + + ++L++M AKCG ++ A+ +F MP++++VS+ +I ++HG
Sbjct: 332 DSYVGNNSIDLQKDHVISALVDMNAKCGNMERALKLFQEMPERDLVSYCSMIHGFSIHGH 391
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
G++A+ +F +M G+ PDE FT +L+ACSHSGL++ G YF M +GISP H+A
Sbjct: 392 GEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLIDKGWKYFNSMEENYGISPTPDHFA 451
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
CMVDLLGR G L +A LI+ + ++P+A WGAL+GACK G+ E+G+ + +L EL
Sbjct: 452 CMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACKLQGDTELGEIVANRLFELEPQ 511
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIR 268
++ YVLLSN+Y+ + RW D+ +R
Sbjct: 512 NAANYVLLSNIYAAAGRWKDVSLVR 536
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 116/254 (45%), Gaps = 35/254 (13%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN+ I H Q ++ + F RM G +PD+ T S++ +CS + +GK H +
Sbjct: 83 WNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGSVF 142
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + + +L++MY KCG + A +F + ++NVVSW ++ G +A +
Sbjct: 143 RCGLDQDLFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKAKK 202
Query: 130 MFEKM----------------------RASGLF---PDE--ITFTGLLSACSHSGLVEMG 162
+F+ M A G+F P++ ++FT ++ + +G +E
Sbjct: 203 VFDGMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMVDGYAKAGDMESS 262
Query: 163 RYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALLG 219
R+ F + DV ++ ++ + G EA+ + ++ + + PD V L+
Sbjct: 263 RFLFEQAA-----EKDVVTWSALISGYVQNGEANEALKVFLEMESMNVIPDEFVLVGLMS 317
Query: 220 ACKTFGNLEMGKQI 233
A G+L++ +++
Sbjct: 318 AASQLGDLKLAQRV 331
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VS+ S+I G +A+ LF RM + G++PD A +L++CSH G + G
Sbjct: 371 MPERDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLIDKG 430
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
K + + +N I+ + ++++ + G L+ A ++ M + N +W +IGA
Sbjct: 431 WKYFNSMEENYGISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACK 490
Query: 120 LHG 122
L G
Sbjct: 491 LQG 493
>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7696262 | 20130731
Length = 857
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/323 (36%), Positives = 188/323 (58%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M P + VSW S I+ V+ G+ + LF R G D + S++ +C+ M
Sbjct: 315 MTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAART 374
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ Y + + N+ + MYAK G + +A + F + +VVSW+V+I + A
Sbjct: 375 GEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQ 434
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG KE++ +FE M SG+ P++IT G+L+ACSH GLV+ G Y+ M +G++ +V
Sbjct: 435 HGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVK 494
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
H AC+VDLLGR G L EA I + D V+W ALLGACK + EMGK+I +++EL
Sbjct: 495 HSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKDTEMGKRIADKVIEL 554
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+++ YVLL N+Y++ + ++RK+M D G+KK IS IE+ + F+VDD++
Sbjct: 555 EPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEVGNTVHTFLVDDRS 614
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H +S IYS + +L+ +K + +
Sbjct: 615 HPISELIYSRLGELLAKIKEISF 637
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 13/250 (5%)
Query: 4 VKNAVSWNSIISCHVQEG---QHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD--L 58
+K+ VSWNSIIS + + G + E +L RM G + TL S+L++C D
Sbjct: 105 IKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCFCVDDNC 164
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF--FGMPQKNVVSWNVIIG 116
G+ H + + +V + +L++MYAK G L+ A+ +F F + KN +N +I
Sbjct: 165 FYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIA 224
Query: 117 ALALHG----SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST 172
G + +EA+ +F +MR G+ + TF+ ++ AC +G E+GR G +
Sbjct: 225 GFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKN 284
Query: 173 FGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
+ D + +VDL G + + + + P K D V W + + C G E G
Sbjct: 285 -SLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTP-KLDVVSWTSAIAGCVKNGKFENGLS 342
Query: 233 ILKQLLELGR 242
+ + L GR
Sbjct: 343 LFYRFLADGR 352
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 5 KNAVSWNSIISCHVQEG----QHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
KN +N++I+ ++ G EA+ +F M GV T S++ +C GD +
Sbjct: 214 KNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEV 273
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ H + N++ + +SL+++Y+ G + + F P+ +VVSW I
Sbjct: 274 GRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVK 333
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G + + +F + A G DE + ++ AC+ G G + FG++
Sbjct: 334 NGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQIQG-YALKFGVADFTV 392
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ + + G + A + Q+ KPD V W ++
Sbjct: 393 VKNTQICMYAKSGDIDSARNTFQETE-KPDVVSWSVMI 429
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 17/191 (8%)
Query: 43 ATLVSILSSCSHMGDLALGKKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFF 101
L ++LS C+ +L LG+ H I N + + + NSL+NMY+KC +QT+ +F
Sbjct: 42 TNLTTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFD 101
Query: 102 GMPQKNVVSWNVIIGALALHGSGKEAIEMFE---KMRASGLFPDEITFTGLLSACSHSGL 158
K+ VSWN II A A G+ E+F+ +M G + T + +L+AC
Sbjct: 102 NSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACC---F 158
Query: 159 VEMGRYYFGLMSSTFGISP----DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKP----- 209
++G + FGI +V ++D+ + G L +A+ + + +K
Sbjct: 159 CVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFM 218
Query: 210 -DAVVWGALLG 219
+A++ G L G
Sbjct: 219 YNAMIAGFLRG 229
>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7697127 | 20130731
Length = 774
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/323 (36%), Positives = 188/323 (58%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M P + VSW S I+ V+ G+ + LF R G D + S++ +C+ M
Sbjct: 315 MTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAART 374
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ Y + + N+ + MYAK G + +A + F + +VVSW+V+I + A
Sbjct: 375 GEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQ 434
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG KE++ +FE M SG+ P++IT G+L+ACSH GLV+ G Y+ M +G++ +V
Sbjct: 435 HGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVK 494
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
H AC+VDLLGR G L EA I + D V+W ALLGACK + EMGK+I +++EL
Sbjct: 495 HSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKDTEMGKRIADKVIEL 554
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+++ YVLL N+Y++ + ++RK+M D G+KK IS IE+ + F+VDD++
Sbjct: 555 EPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEVGNTVHTFLVDDRS 614
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H +S IYS + +L+ +K + +
Sbjct: 615 HPISELIYSRLGELLAKIKEISF 637
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 13/250 (5%)
Query: 4 VKNAVSWNSIISCHVQEG---QHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD--L 58
+K+ VSWNSIIS + + G + E +L RM G + TL S+L++C D
Sbjct: 105 IKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCFCVDDNC 164
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF--FGMPQKNVVSWNVIIG 116
G+ H + + +V + +L++MYAK G L+ A+ +F F + KN +N +I
Sbjct: 165 FYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIA 224
Query: 117 ALALHG----SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST 172
G + +EA+ +F +MR G+ + TF+ ++ AC +G E+GR G +
Sbjct: 225 GFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKN 284
Query: 173 FGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
+ D + +VDL G + + + + P K D V W + + C G E G
Sbjct: 285 -SLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTP-KLDVVSWTSAIAGCVKNGKFENGLS 342
Query: 233 ILKQLLELGR 242
+ + L GR
Sbjct: 343 LFYRFLADGR 352
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 5 KNAVSWNSIISCHVQEG----QHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
KN +N++I+ ++ G EA+ +F M GV T S++ +C GD +
Sbjct: 214 KNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEV 273
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ H + N++ + +SL+++Y+ G + + F P+ +VVSW I
Sbjct: 274 GRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVK 333
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G + + +F + A G DE + ++ AC+ G G + FG++
Sbjct: 334 NGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQIQG-YALKFGVADFTV 392
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ + + G + A + Q+ KPD V W ++
Sbjct: 393 VKNTQICMYAKSGDIDSARNTFQETE-KPDVVSWSVMI 429
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 17/191 (8%)
Query: 43 ATLVSILSSCSHMGDLALGKKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFF 101
L ++LS C+ +L LG+ H I N + + + NSL+NMY+KC +QT+ +F
Sbjct: 42 TNLTTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFD 101
Query: 102 GMPQKNVVSWNVIIGALALHGSGKEAIEMFE---KMRASGLFPDEITFTGLLSACSHSGL 158
K+ VSWN II A A G+ E+F+ +M G + T + +L+AC
Sbjct: 102 NSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACC---F 158
Query: 159 VEMGRYYFGLMSSTFGISP----DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKP----- 209
++G + FGI +V ++D+ + G L +A+ + + +K
Sbjct: 159 CVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFM 218
Query: 210 -DAVVWGALLG 219
+A++ G L G
Sbjct: 219 YNAMIAGFLRG 229
>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15020896-15019352 | 20130731
Length = 514
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/323 (37%), Positives = 185/323 (57%), Gaps = 4/323 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCV--SGVMPDNATLVSILSSCSHMGDLALGK 62
++ V+W +I + Q G A++LF M + ++P++ T+ +L +C+ + L GK
Sbjct: 159 RDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGK 218
Query: 63 KAHDYICDNNITVSVTL--CNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H Y+ + S L N L++MY+K G + TA +F M ++N +SW ++ +
Sbjct: 219 QIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGM 278
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG ++A +F++MR L D ITF +L ACSHSG+V+ G F MS F + P V
Sbjct: 279 HGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVE 338
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYACM DL GR G L EA LI + M+P VVW ALL AC+T N+E+ + K+LLEL
Sbjct: 339 HYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNVELAEFAAKKLLEL 398
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ G Y LLSN+Y+ ++RW D+ +IR +M +GIKK S ++ F V D+
Sbjct: 399 KADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDRT 458
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H S IY + L+ +K++GY
Sbjct: 459 HSQSQKIYETLADLIQRIKAIGY 481
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 119/225 (52%), Gaps = 13/225 (5%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V+W+S+IS + Q G EAM++F +MC P+ TL+S+LS C+ +G L GK+ H
Sbjct: 50 DVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETH 109
Query: 66 DYICD-------NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM--PQKNVVSWNVIIG 116
Y N+ + N+L++MYAKC +L+ A +F + ++VV+W V+IG
Sbjct: 110 CYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIG 169
Query: 117 ALALHGSGKEAIEMFEKMRA--SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
A +G A+++F +M + + P++ T + +L AC+ + G+ +
Sbjct: 170 GYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSR 229
Query: 175 ISPDVAHYA-CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
I DV A C++D+ + G + A + + K +A+ W +LL
Sbjct: 230 IDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAISWTSLL 273
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/323 (37%), Positives = 185/323 (57%), Gaps = 4/323 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCV--SGVMPDNATLVSILSSCSHMGDLALGK 62
++ V+W +I + Q G A++LF M + ++P++ T+ +L +C+ + L GK
Sbjct: 216 RDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGK 275
Query: 63 KAHDYICDNNITVSVTL--CNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H Y+ + S L N L++MY+K G + TA +F M ++N +SW ++ +
Sbjct: 276 QIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGM 335
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG ++A +F++MR L D ITF +L ACSHSG+V+ G F MS F + P V
Sbjct: 336 HGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVE 395
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYACM DL GR G L EA LI + M+P VVW ALL AC+T N+E+ + K+LLEL
Sbjct: 396 HYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNVELAEFAAKKLLEL 455
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ G Y LLSN+Y+ ++RW D+ +IR +M +GIKK S ++ F V D+
Sbjct: 456 KADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDRT 515
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H S IY + L+ +K++GY
Sbjct: 516 HSQSQKIYETLADLIQRIKAIGY 538
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 119/225 (52%), Gaps = 13/225 (5%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V+W+S+IS + Q G EAM++F +MC P+ TL+S+LS C+ +G L GK+ H
Sbjct: 107 DVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETH 166
Query: 66 DYICD-------NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM--PQKNVVSWNVIIG 116
Y N+ + N+L++MYAKC +L+ A +F + ++VV+W V+IG
Sbjct: 167 CYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIG 226
Query: 117 ALALHGSGKEAIEMFEKMRA--SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
A +G A+++F +M + + P++ T + +L AC+ + G+ +
Sbjct: 227 GYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSR 286
Query: 175 ISPDVAHYA-CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
I DV A C++D+ + G + A + + K +A+ W +LL
Sbjct: 287 IDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAISWTSLL 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 42/202 (20%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMR----- 135
N+L++MYAKCG ++ A ++ M K+VV+WN ++ + +G ++A+ +F KMR
Sbjct: 46 NALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIE 105
Query: 136 ---------------------ASGLF---------PDEITFTGLLSACSHSGLVEMGR-- 163
A +F P+ +T LLS C+ G + G+
Sbjct: 106 LDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKET 165
Query: 164 ----YYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKL-PMKPDAVVWGALL 218
F L + D+A ++D+ + L A ++ ++ P D V W ++
Sbjct: 166 HCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMI 225
Query: 219 GACKTFGNLEMGKQILKQLLEL 240
G +G+ Q+ ++ +
Sbjct: 226 GGYAQYGDANHALQLFSEMFKF 247
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 183/322 (56%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ VSW ++I ++G+ E LF + SGV P+ T +L++C+ + +G
Sbjct: 257 MADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMG 316
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H Y+ ++L+++Y+KCG +TA +F MP+ ++VSW +I A +
Sbjct: 317 KEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQN 376
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G A++ FE + SG PDEITF G+LSAC+H+GLV++G YF + G+ H
Sbjct: 377 GQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADH 436
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YAC++DLL R G EA ++I +PMKPD +W +LLG C+ GN+E+ ++ K L EL
Sbjct: 437 YACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELE 496
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ Y+ LSN+Y+ + W + K+R M++ GI K S IEI + F+V D +H
Sbjct: 497 PENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSH 556
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+ I+ + +L +K GY
Sbjct: 557 PKISDIHEYLGELSKKMKEEGY 578
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 124/241 (51%), Gaps = 3/241 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNA-TLVSILSSCSHMGDLAL 60
MP ++ SWN++IS +V +G + EA++LF M + N TL S L++ + + L
Sbjct: 155 MPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRR 214
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+ H Y+ + + + + +L+++Y KCG+L A IF M K++VSW +I
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFE 274
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G KE +F + SG+ P+E TF G+L+AC+ +MG+ G M+ G P
Sbjct: 275 DGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRV-GYDPFSF 333
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+ +V + + G A + ++P +PD V W +L+ G +M Q + LL
Sbjct: 334 AASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLIVGYAQNGQPDMALQFFESLLRS 392
Query: 241 G 241
G
Sbjct: 393 G 393
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 117/272 (43%), Gaps = 43/272 (15%)
Query: 11 NSIISCHVQEGQHAEAMELFCRM-----CVSGV----MPDNATLVSILSSCSHMGDLALG 61
++ +S H + + E +ELFC+ V + P +++++C L LG
Sbjct: 23 DTTLSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELG 82
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + +N + + N L++MYAKCG+L A +F +PQK++ SWN +I A
Sbjct: 83 KRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANV 142
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEM-------------------- 161
G ++A ++F++M F +G +S + +++
Sbjct: 143 GRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSA 202
Query: 162 ------------GRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKP 209
G+ G + + G+ D + ++DL G+ G L EA + ++ K
Sbjct: 203 LAAAAAISSLRRGKEIHGYLIRS-GLELDEVVWTALLDLYGKCGSLNEARGIFDQMADK- 260
Query: 210 DAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
D V W ++ C G + G + + L+ G
Sbjct: 261 DIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSG 292
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 231 bits (589), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 126/318 (39%), Positives = 176/318 (55%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ VS I+ Q G EA+++F +M G+ D + ++L LALGK+ H
Sbjct: 316 DGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIH 375
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
I N + + N L+NMY+KCG L ++ +F+ M QKN VSWN +I A A HG G
Sbjct: 376 SLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGF 435
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
+A++ +E+MR G+ P ++TF LL ACSH+GLVE G M++ GISP HYAC+
Sbjct: 436 KALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACV 495
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
VD+LGR G L EA I+ LP +VW ALLGAC G+ EMGK +L
Sbjct: 496 VDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASP 555
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
YVL++N+YS W + K M + G+ K IS IEI+ F+V DK H +
Sbjct: 556 APYVLMANIYSSEGNWKERASSIKRMKEMGVAKEVGISWIEIEKKVNSFVVGDKLHPEAD 615
Query: 306 SIYSMVDQLMDHLKSVGY 323
I+ ++ L+ HLK GY
Sbjct: 616 VIFWVLSGLLKHLKDEGY 633
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 120/247 (48%), Gaps = 9/247 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVM---PDNATLVSILSSCSHMG-- 56
MPV++ VSWN++IS ++ G + + F +M S + D ATL ++LS C +
Sbjct: 103 MPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSGCDGLRLG 162
Query: 57 -DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVII 115
++ + H + +T+ N+L+ Y KC +F M ++NVV+W +I
Sbjct: 163 ISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVI 222
Query: 116 GALALHGSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
LA + ++++ +F +MR G + P+ +T+ L ACS ++ G+ GL+ G
Sbjct: 223 SGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWK-LG 281
Query: 175 ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
+ D+ + ++DL + G L A + + + D V +L A G E QI
Sbjct: 282 MQSDLCIESALMDLYSKCGSLDAAWQIFESAE-ELDGVSLTVILVAFAQNGFEEEAIQIF 340
Query: 235 KQLLELG 241
+++ LG
Sbjct: 341 TKMVALG 347
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 118/227 (51%), Gaps = 5/227 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDNATLVSILSSCSHMGDLAL 60
M +N V+W ++IS Q + +++ LF +M C V P+ T +S L +CS + L
Sbjct: 210 MIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRD 269
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+K H + + + + ++LM++Y+KCG+L A IF + + VS VI+ A A
Sbjct: 270 GQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQ 329
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL-MSSTFGISPDV 179
+G +EAI++F KM A G+ D + +L + +G+ L + F +P V
Sbjct: 330 NGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFV 389
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
+ +V++ + G L +++ + ++ K ++V W +++ A G+
Sbjct: 390 GN--GLVNMYSKCGDLSDSLLVFYQMTQK-NSVSWNSVIAAFARHGD 433
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN+VSWNS+I+ + G +A++ + M V GV P + T +S+L +CSH G + G
Sbjct: 413 MTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKG 472
Query: 62 KKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALA 119
+ + + D+ I+ +++M + G L A G+P+ V+ W ++GA +
Sbjct: 473 MELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACS 532
Query: 120 LHGSGK 125
+HG +
Sbjct: 533 IHGDSE 538
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 48/249 (19%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYIC--------DNNITVSVTLCNSLMNMYAKCGA 92
++A L S+L+ C +L LG H I D + ++ + NSL++MY+KCG
Sbjct: 33 NHADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGE 92
Query: 93 LQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF---PDEITFTGL 149
+ A ++F MP ++ VSWN +I +G + + F++M S D+ T T +
Sbjct: 93 FRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTM 152
Query: 150 LSACSH-------------SGLVEMGRYYF------GLMSSTFG--------------IS 176
LS C GLV +G + L++S F I
Sbjct: 153 LSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIE 212
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKL----PMKPDAVVWGALLGACKTFGNLEMGKQ 232
+V + ++ L + F +++ L ++ + P+ + + + L AC L G++
Sbjct: 213 RNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQK 272
Query: 233 ILKQLLELG 241
I L +LG
Sbjct: 273 IHGLLWKLG 281
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 189/315 (60%), Gaps = 1/315 (0%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WNS+I+ + G A F + V+ P++ TLVS+L C+ +G L GK+ H Y
Sbjct: 408 WNSLIAGYNLVGDFQSAFFTFREIWVAEHRPNHITLVSVLPICTQIGALRQGKEIHCYAT 467
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + +++++ NSL++MY+KCG L+ + +F M KN +++N +I A HG G++ ++
Sbjct: 468 RSGLGLNISVGNSLIDMYSKCGFLELGVKVFNQMMVKNTITYNTMISACGAHGLGEKGLK 527
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLL 189
+E+M +G+ P+++TF LLSACSH+GLV+ G + M + +GI PD+ HY+CMVDL+
Sbjct: 528 FYEQMNEAGMKPNKVTFISLLSACSHAGLVDRGWLLYNSMVNDYGIKPDMEHYSCMVDLI 587
Query: 190 GRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL-KQLLELGRYDSGLY 248
GR G L A I +P+ PDA V G+LLGAC+ +E+ Q+ + + +L DSG Y
Sbjct: 588 GRTGDLDGAYKFITTMPVTPDANVLGSLLGACRLHNKVELADQLTAEHIFQLNTEDSGHY 647
Query: 249 VLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSIY 308
VLLSN+Y+ +RW+DM K+R ++ D G++K S I++ + F + I
Sbjct: 648 VLLSNLYASGKRWEDMSKVRSLIKDKGLEKKPGSSWIQVGHSIFVFHATSIFYPELAKIE 707
Query: 309 SMVDQLMDHLKSVGY 323
+D L +K+ Y
Sbjct: 708 ETLDSLFLVMKNEDY 722
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 122/240 (50%), Gaps = 2/240 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSW+++I+ + Q G + E+ EL+ RM G+ + + ++L + + G
Sbjct: 299 MVFRDIVSWSTLIAGYSQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQG 358
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H+++ + V + ++L++MYA CG+++ A IF M +++ WN +I L
Sbjct: 359 KEMHNFVLKQGLLTDVVVGSALVDMYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLV 418
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G + A F ++ + P+ IT +L C+ G + G+ + + G+ +++
Sbjct: 419 GDFQSAFFTFREIWVAEHRPNHITLVSVLPICTQIGALRQGKEIHCYATRS-GLGLNISV 477
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D+ + GFL + + ++ +K + + + ++ AC G E G + +Q+ E G
Sbjct: 478 GNSLIDMYSKCGFLELGVKVFNQMMVK-NTITYNTMISACGAHGLGEKGLKFYEQMNEAG 536
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 3/228 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSH-MGDLAL 60
M V++ +W ++I +V G+ EA+ LF +M + G+ D+ + S+L C M L L
Sbjct: 197 MNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVCGRLMEGLKL 256
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G H + + + N++++MY KCG A +F M +++VSW+ +I +
Sbjct: 257 GMAMHGCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGYSQ 316
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G KE+ E++ +M GL +EI + +L A L + G+ + G+ DV
Sbjct: 317 NGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQ-GLLTDVV 375
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
+ +VD+ G + EA S+ + + + D +VW +L+ G+ +
Sbjct: 376 VGSALVDMYANCGSIKEAESIFRNM-LDMDIMVWNSLIAGYNLVGDFQ 422
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 113/242 (46%), Gaps = 5/242 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K+ ++WN+I+ + +++ + M G PDN T +L +CS + + +G
Sbjct: 96 LPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFAPDNYTYPLVLKACSSLQAIEIG 155
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ + I N ++ + +L++M+ KC +L+ A +F M +++ +W +I +
Sbjct: 156 RWVYHNILINEEKANLFVQCALIDMFVKCESLEDARKVFDEMNVRDLATWTALICGNVWN 215
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH--SGLVEMGRYYFGLMSSTFGISPDV 179
G EA+ +F KMR GL D + +L C GL ++G G + G D+
Sbjct: 216 GEWDEAVLLFRKMRLEGLKADSVIVASVLPVCGRLMEGL-KLGMAMHGCALRS-GFDSDL 273
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D+ + G+ EA + + + D V W L+ G + ++ +++
Sbjct: 274 YVSNAIIDMYCKCGYPDEACLVFSYMVFR-DIVSWSTLIAGYSQNGMYKESFELYVRMVN 332
Query: 240 LG 241
+G
Sbjct: 333 MG 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 79 LCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASG 138
LC+ L+N Y G+ A F +P K+ ++WN I+ AL + +I+ + M G
Sbjct: 72 LCSHLVNAYVNFGSHHYAFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHG 131
Query: 139 LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY---ACMVDLLGRGGFL 195
PD T+ +L ACS +E+GR+ + I+ + A+ ++D+ + L
Sbjct: 132 FAPDNYTYPLVLKACSSLQAIEIGRWVY----HNILINEEKANLFVQCALIDMFVKCESL 187
Query: 196 GEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL---KQLLELGRYDS 245
+A + ++ ++ D W AL+ C N E + +L K LE + DS
Sbjct: 188 EDARKVFDEMNVR-DLATWTALI--CGNVWNGEWDEAVLLFRKMRLEGLKADS 237
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 189/320 (59%), Gaps = 2/320 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ VSW ++++ + Q + +A+ +F +MC G P++ T S++++C + L G
Sbjct: 435 MEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFAPNHFTFSSVITACGGLCLLEYG 494
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H IC ++ + ++L++MY+KCG L A +IF + + V+W II A H
Sbjct: 495 QQIHGLICKASLDAESCIESALIDMYSKCGNLTEAKNIFERISNPDTVTWTAIISTYAQH 554
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++A+++F KM S + + +T +L ACSH G+VE G F M T+G+ P++ H
Sbjct: 555 GLVEDALQLFRKMEQSAVKANAVTLLCILFACSHGGMVEDGLEIFNQMEGTYGVVPEMEH 614
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL--E 239
YAC+VDLLGR G L EA++ I K+P++PD +VW LLGAC+ GN E+G+ +++L +
Sbjct: 615 YACVVDLLGRVGRLDEAVAFIDKMPIEPDEMVWQTLLGACRIHGNAELGETAAQKILSTQ 674
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
S YVLLSN Y ES +D +R +M + GI+K S I + G ++F D+
Sbjct: 675 PEPEHSSTYVLLSNTYIESGLLEDGIGLRDVMKERGIRKEPGYSWISVRGEVHKFYARDQ 734
Query: 300 NHEVSTSIYSMVDQLMDHLK 319
H IY+M+++L +K
Sbjct: 735 QHPQKDKIYTMLEELTRRIK 754
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 120/229 (52%), Gaps = 3/229 (1%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN++I+ + Q G H EA+E+F RMC + V PD T + +S + + L K+AH
Sbjct: 341 WNAMITGYSQAGCHLEALEMFTRMCQNDVKPDLYTFCCVFNSIAGLKCLKSLKEAHGVAL 400
Query: 70 DNNI-TVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ +++ N+L + Y KC +L+ +F+ M +K++VSW ++ A +A+
Sbjct: 401 KCGFDAMEISVLNALADAYVKCESLEAGEKVFYKMEKKDIVSWTTMVTAYCQCSEWGKAL 460
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
+F +M G P+ TF+ +++AC L+E G+ GL+ + + + ++D+
Sbjct: 461 AIFSQMCNEGFAPNHFTFSSVITACGGLCLLEYGQQIHGLICKA-SLDAESCIESALIDM 519
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ G L EA ++ +++ PD V W A++ G +E Q+ +++
Sbjct: 520 YSKCGNLTEAKNIFERIS-NPDTVTWTAIISTYAQHGLVEDALQLFRKM 567
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N SW +I + G + A+ELFC M G++ D ++L SC + + G
Sbjct: 129 MSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQSCVGLDSVVFG 188
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + + SL+N+YAK G + ++++F M N VSWN +I +
Sbjct: 189 EMVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAMISGFTSN 248
Query: 122 GSGKEAIEMFEKMRASGLFPDEITF------TGLLSACSHSGLVEMGRYYFGLMSST 172
G +A + M +G+ P++ TF GLL + V Y +GL S+T
Sbjct: 249 GLYLQAFDFLINMIENGVSPNKTTFLCISKAVGLLGDINRCHEVHRYAYEWGLDSNT 305
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N VSWN++IS G + +A + M +GV P+ T + I + +GD+ + H
Sbjct: 234 NDVSWNAMISGFTSNGLYLQAFDFLINMIENGVSPNKTTFLCISKAVGLLGDINRCHEVH 293
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS--WNVIIGALALHGS 123
Y + + + ++ +L+NMY+KCG L A +F +V+ WN +I + G
Sbjct: 294 RYAYEWGLDSNTSVGTALINMYSKCGVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGC 353
Query: 124 GKEAIEMFEKMRASGLFPDEITF 146
EA+EMF +M + + PD TF
Sbjct: 354 HLEALEMFTRMCQNDVKPDLYTF 376
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 40 PDNATLVSILSSCSHMGDLALGKKAHDYICDNNI--TVSVTLCNSLMNMYAKCGALQTAM 97
P+ L+ +L SC G L H ++ + ++ N +++ Y+KC +A
Sbjct: 64 PNIQPLIDLLKSCEQNGSLKQANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCKDYDSAR 123
Query: 98 DIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
+F GM ++NV SW V+I A HG + A+E+F M GL D F+ +L +C
Sbjct: 124 KVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQSC 179
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 181/319 (56%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N V W S+++ ++Q G+ E + L M G M + T +L++ + M L G
Sbjct: 291 RNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLL 350
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + I V + N+L+NMY+KCG + ++ D+FF M +++++WN +I + HG G
Sbjct: 351 HARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLG 410
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
K+A+ +F+ M ++G P+ +TF G+LSAC+H LV G YY + F + P + HY C
Sbjct: 411 KQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTC 470
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+V +L R G L EA + ++ +K D V W LL AC N +G +I + +L++ D
Sbjct: 471 VVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRD 530
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
G Y LLSNMY++++ WD + IRK+M + +KK +S IEI + F D NH
Sbjct: 531 MGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPEC 590
Query: 305 TSIYSMVDQLMDHLKSVGY 323
IY+ V L++ +K +GY
Sbjct: 591 IQIYNKVQLLLEMIKQLGY 609
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 5/230 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+A +NS+++ V+ G+ EA+E+ RM GV+ D+ T VS++ C + DL LG +
Sbjct: 190 NDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQV 249
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + +T V + + L++M+ KCG + +A +F G+ +NVV W ++ A +G
Sbjct: 250 HAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEF 309
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+E + + M G +E TF LL+A + + G + GI V
Sbjct: 310 EETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEK-LGIKNRVIVGNA 368
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
++++ + G + + + + + D + W A++ G +GKQ L
Sbjct: 369 LINMYSKCGCIDSSYDVFFDMRNR-DIITWNAMICGYSQHG---LGKQAL 414
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 114/233 (48%), Gaps = 9/233 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +++ VS+N ++ ++ G+H E ++LF M S P+ ++LS+C+H G + G
Sbjct: 81 MSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEG 140
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM-----PQKNVVSWNVIIG 116
+ H ++ + + +SL++MY+KC + A+ + + +N ++
Sbjct: 141 MQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLN 200
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG-RYYFGLMSSTFGI 175
AL G EA+E+ +M G+ D +T+ ++ C + +G + + L+ G+
Sbjct: 201 ALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKG--GL 258
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
+ DV + +VD+ G+ G + A + L + + VVW +L+ A G E
Sbjct: 259 TFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNR-NVVVWTSLMTAYLQNGEFE 310
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 54/265 (20%)
Query: 57 DLALGKKAHDYICDNNIT--------VSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV 108
+L GK H + N + ++ NSL+N+Y KC L+ A +F M ++V
Sbjct: 27 NLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSV 86
Query: 109 VSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR----- 163
VS+NV++G G E +++F+ M +S P+E FT +LSAC+HSG V G
Sbjct: 87 VSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGF 146
Query: 164 -YYFGLMSSTFGISP-----------------------------DVAHYACMVDLLGRGG 193
+ FGL+ F S D Y +++ L G
Sbjct: 147 LFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESG 206
Query: 194 FLGEAMSLIQKLPMKPDAVVWG-----ALLGACKTFGNLEMGKQILKQLLELG-RYDSGL 247
LGEA+ ++ + M + VVW +++G C +L +G Q+ QLL+ G +D +
Sbjct: 207 RLGEAVEVLGR--MVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFV 264
Query: 248 YVLLSNMYSESQRWDDMKKIRKIMN 272
+L +M+ + D+ RK+ +
Sbjct: 265 GSMLVDMFGKC---GDVLSARKVFD 286
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 180/322 (55%), Gaps = 6/322 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN+ +WN+I S + G EA++ RM GV D + L++ ++ L G++
Sbjct: 716 KNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQL 775
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS---WNVIIGALALH 121
H +I + + N+ M+MY KCG + D+F +P + S WN++I ALA H
Sbjct: 776 HSWIIKLGFELDEYVLNATMDMYGKCGEID---DVFRILPIPKIRSKRSWNILISALARH 832
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++A E F +M GL PD +TF LLSACSH GLV+ G YF M+S FG+ + H
Sbjct: 833 GFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEH 892
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
C++DLLGR G L EA I K+P+ P+ VW +LL ACK GNLE+G++ +L EL
Sbjct: 893 CVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELN 952
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
D YVL SN+ + +QRW D++ +RK M +KK A S I++ F + D+ H
Sbjct: 953 SSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFH 1012
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
S IY+ +++L + G+
Sbjct: 1013 PQSAQIYAKLEELRKMTREEGH 1034
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 111/218 (50%), Gaps = 5/218 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ +SWNSII+ G+ E++ F M + D T+ ++L +C L G
Sbjct: 412 MQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWG 471
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H I + + +V +CNSL++MYA+ G+ + A +F MP ++++SWN ++ +
Sbjct: 472 RGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVED 531
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G AI + +M + + +TFT LSAC + +++ + F + ++
Sbjct: 532 GKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIVHAFV----IHFAVHHNLII 587
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
+V + G+ G + EA + + +P + D V W AL+G
Sbjct: 588 GNTLVTMYGKFGLMDEAQKVCKIMPER-DVVTWNALIG 624
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 34/264 (12%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSC-SHMGDLA 59
+MP ++ V+WN++I H + ++ F M G++ + T+V++L +C S L
Sbjct: 610 IMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLK 669
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G H +I + + +SL+ MYA+CG L T+ IF + KN +WN I A A
Sbjct: 670 HGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANA 729
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMG----RY 164
+G G+EA++ +MR G+ D+ +F+ L+ HS ++++G Y
Sbjct: 730 HYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEY 789
Query: 165 YF----------GLMSSTFGISP-----DVAHYACMVDLLGRGGFLGEAMSLIQK---LP 206
G + F I P + ++ L R GF +A + L
Sbjct: 790 VLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLG 849
Query: 207 MKPDAVVWGALLGACKTFGNLEMG 230
+KPD V + +LL AC G ++ G
Sbjct: 850 LKPDHVTFVSLLSACSHGGLVDEG 873
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 136/287 (47%), Gaps = 34/287 (11%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA- 64
N VSW S++ C+ G E + ++ + +G++ T+ +++ +C GD +G +
Sbjct: 314 NIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQIL 373
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
D I T SV++ NSL++M+ +++ A +F M +++ +SWN II A A +G
Sbjct: 374 GDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRF 433
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+E++ F MR + D IT + LL AC + ++ GR GL++ + G+ +V
Sbjct: 434 EESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKS-GLESNVCVCNS 492
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
++ + + G +A + +P + D + W +++ + +E G+Y
Sbjct: 493 LLSMYAQAGSSEDAELVFHTMPAR-DLISWNSMMAS----------------HVEDGKYS 535
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMN----DSGIKKCRAISSIEI 287
+ +L+ +M K RK MN + + C + ++I
Sbjct: 536 HAILLLV-----------EMLKTRKAMNYVTFTTALSACYNLEKLKI 571
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG-KK 63
+N SWN++IS V+ G + +AM+ FC M +GV P + + S++++C G + G ++
Sbjct: 211 RNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQ 270
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H Y+ + +V + SL++ Y G++ A +F + + N+VSW ++ A +G
Sbjct: 271 IHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGH 330
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
KE + ++ +R +GL T ++ C G MG G + + + V+
Sbjct: 331 TKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVAN 390
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
++ + G + EA + + + D + W +++ A G E
Sbjct: 391 SLISMFGNYDSVEEASRVFNNMQER-DTISWNSIITASAHNGRFE 434
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 6/241 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ +SWNS+++ HV++G+++ A+ L M + + T + LS+C ++ L
Sbjct: 513 MPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL--- 569
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H ++ + ++ + N+L+ MY K G + A + MP+++VV+WN +IG A
Sbjct: 570 KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADD 629
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSAC-SHSGLVEMGRYYFGLMSSTFGISPDVA 180
I+ F MR GL + IT LL C S L++ G + G D
Sbjct: 630 KDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVA-GFELDTY 688
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+ ++ + + G L + + L K ++ W A+ A +G E + + ++
Sbjct: 689 VQSSLITMYAQCGDLNTSSYIFDVLANK-NSSTWNAIFSANAHYGPGEEALKFIARMRND 747
Query: 241 G 241
G
Sbjct: 748 G 748
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 109/257 (42%), Gaps = 39/257 (15%)
Query: 53 SHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWN 112
S + + +GK H + I + N+L+NMY+K G+++ A +F M +N SWN
Sbjct: 158 SEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWN 217
Query: 113 VIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG-LVEMGRYYFGLMSS 171
+I G +A++ F M +G+ P +++AC SG + E R G +
Sbjct: 218 NMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVK 277
Query: 172 TFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGAL-------------- 217
G+ +V ++ G G + EA L +++ +P+ V W +L
Sbjct: 278 C-GLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSLMVCYADNGHTKEVL 335
Query: 218 ---------------------LGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYS 256
+ C FG+ MG QIL +++ G D+ + +++ S
Sbjct: 336 NIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSG-LDTSSVSVANSLIS 394
Query: 257 ESQRWDDMKKIRKIMND 273
+D +++ ++ N+
Sbjct: 395 MFGNYDSVEEASRVFNN 411
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+++ SWN +IS + G +A E F M G+ PD+ T VS+LS+CSH G + G
Sbjct: 816 IRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLV 875
Query: 64 AHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALALH 121
+ + ++ C ++++ + G L A MP N W ++ A +H
Sbjct: 876 YFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVH 935
Query: 122 GS---GKEAIEMFEKMRAS 137
G+ G++A + ++ +S
Sbjct: 936 GNLELGRKAADRLFELNSS 954
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 188/312 (60%), Gaps = 1/312 (0%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+K+ V W ++IS H Q +A+ L+ M + ++PD AT V++L +C+ + L G++
Sbjct: 609 LKSIVLWTALISGHTQNDCSDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQE 668
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALALHG 122
H I + ++L++MYAKCG +++A +F +P +K+V+SWN +I A +G
Sbjct: 669 IHSLIFHTGFDLDELTSSALVDMYAKCGDVKSAAKVFEELPIKKDVISWNSMIVGFAKNG 728
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+ A+++F++M S + PD++TF G+L+ACSH+GLV GR F M + + I P V H+
Sbjct: 729 YAERALKVFDEMTLSSVSPDDVTFLGVLTACSHAGLVSEGRQIFDNMVNYYSIHPRVDHH 788
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
ACMVDLLGR GFL EA I KL ++P+A++W LLGAC G+ + G + ++L+EL
Sbjct: 789 ACMVDLLGRCGFLEEAEEFIDKLDVEPNAMIWANLLGACSIHGDEKRGLRAAEKLIELEP 848
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHE 302
+S YVLL NM++ S WD+ K +R+ M + ++K S I +D F+ D +H
Sbjct: 849 QNSSPYVLLYNMHAGSGHWDEAKSLRRTMVQNEVQKTPGCSWIVVDKTTNLFVASDMSHP 908
Query: 303 VSTSIYSMVDQL 314
S I + L
Sbjct: 909 SSDEISHALKHL 920
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 36/291 (12%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N V WN+I+ + Q G ++ MELF M G PD T SILSSC+ L +G++
Sbjct: 306 RNVVMWNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQL 365
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I T ++ + N+L++MYAK GAL+ A F M ++ +SWN I+
Sbjct: 366 HSTIIKKRFTDNLCVNNALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEE 425
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA MF +M G+ PDE+ +LSAC + ++E G + GL S G+ ++ +
Sbjct: 426 TEAFNMFRRMNRHGVVPDEVCMASILSACGNIKVLEAGLQFHGL-SVKLGLDTNLFAGSS 484
Query: 185 MVDLLGRGGFLGEAMSL---------------------------------IQKLPMKPDA 211
++D+ + G + +A + +Q L +KP
Sbjct: 485 LIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIAGYAIKDTKEAINLLHEMQILGLKPSE 544
Query: 212 VVWGALLGACKTFGNLEMGKQILKQLLELGRY--DSGLYVLLSNMYSESQR 260
+ + +L+ CK + +G QI +L+ G L L MY +SQ+
Sbjct: 545 ITFASLIDCCKESPKVILGMQIHCAILKNGLLCGSEFLGTSLLGMYMDSQK 595
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 149/314 (47%), Gaps = 40/314 (12%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V+WN +IS H + G H EA+E + +M ++GV+ +TL S+LS+ + +GDL G H
Sbjct: 206 NVVAWNVMISGHGKRGYHKEAVEFYRKMRMNGVISSRSTLASVLSAVAGLGDLGCGLLVH 265
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
SV + +SL+NMY KC L A +F + +NVV WN I+G A +G
Sbjct: 266 GEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLS 325
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR-YYFGLMSSTFGISPDVAHYAC 184
+ +E+F +M G PDE T++ +LS+C+ +++GR + ++ F + ++
Sbjct: 326 DVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRF--TDNLCVNNA 383
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMK----------------------------------PD 210
+VD+ + G L EA +++ + PD
Sbjct: 384 LVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPD 443
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMKKIR 268
V ++L AC LE G Q ++LG D+ L+ L +MYS+ +D +KI
Sbjct: 444 EVCMASILSACGNIKVLEAGLQFHGLSVKLG-LDTNLFAGSSLIDMYSKCGGIEDARKIY 502
Query: 269 KIMNDSGIKKCRAI 282
M + + A+
Sbjct: 503 SCMPEWSVVSMNAL 516
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ +SWN+I+ +VQE + EA +F RM GV+PD + SILS+C ++ L G
Sbjct: 404 MKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMASILSACGNIKVLEAG 463
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + ++ +SL++MY+KCG ++ A I+ MP+ +VVS N +I A+
Sbjct: 464 LQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIAGYAIK 523
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG 162
+ KEAI + +M+ GL P EITF L+ C S V +G
Sbjct: 524 DT-KEAINLLHEMQILGLKPSEITFASLIDCCKESPKVILG 563
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 14/238 (5%)
Query: 47 SILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ- 105
+ LSSC+ + +L G H I N L L++ YAKC L +A +F + +
Sbjct: 77 TTLSSCTKLENLEFGTSVHTSIIKNGFESDTLLTRHLIHFYAKCKCLNSARTLFNSVSRL 136
Query: 106 --KNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR 163
+ ++ +IG G +A+++F++M+ SG DE+ +L+AC + G ++
Sbjct: 137 DNLDTATFTALIGGYVRVGMFDDALQLFDEMQ-SGFVLDELVIVTVLNACVNLGKLDHAC 195
Query: 164 YYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGA 220
F M +V + M+ G+ G+ EA+ +K+ M ++L A
Sbjct: 196 ELFDEMDGC----GNVVAWNVMISGHGKRGYHKEAVEFYRKMRMNGVISSRSTLASVLSA 251
Query: 221 CKTFGNLEMGKQILKQLLELGRYDSGLYVL--LSNMYSESQRWDDMKKIRKIMNDSGI 276
G+L G + + ++LG ++S +YV L NMY + + D KK+ ++ D +
Sbjct: 252 VAGLGDLGCGLLVHGEAVKLG-FESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNV 308
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 187/312 (59%), Gaps = 3/312 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GV-MPDNATLVSILSSCSHMGDLALGK 62
++ VSWNS++S ++ G EA+ LFC M G+ PDNATLV++L + + D+ G
Sbjct: 184 RDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKADIHAGY 243
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H YI + + + L+ +Y+ CG ++ A +F +P +NV+ W+ II +HG
Sbjct: 244 WIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSAIIRCYGMHG 303
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+EA+ MF ++ GL D I F LLSACSH+G+ E G + F M T+G+ AHY
Sbjct: 304 FAQEALSMFRQLVELGLHLDGIVFLSLLSACSHAGMHEEGWHLFQTME-TYGVVKGEAHY 362
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
ACMVDLLGR G L +AM LIQ +P++P V+GALLGA + N+E+ + ++L L
Sbjct: 363 ACMVDLLGRAGNLEKAMELIQSMPIQPGKNVYGALLGASRIHKNIELAELAAEKLFVLDP 422
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHE 302
++G YV+L+ MY + RW D ++RKI+ + IKK SS+E++ +F V+D+ H
Sbjct: 423 NNAGRYVILAQMYEDEGRWKDAARLRKIIREKEIKKPIGYSSVELESGHKKFGVNDETHP 482
Query: 303 VSTSIYSMVDQL 314
++T I+ + L
Sbjct: 483 LTTEIFETLVSL 494
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 120/248 (48%), Gaps = 4/248 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ WN++I + G AEA+ ++ M +SG P+ T +L +C D G+
Sbjct: 83 RDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERDCLKGRII 142
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + + + N+ + YAKC ++ + +F M ++++VSWN ++ +G
Sbjct: 143 HGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGYV 202
Query: 125 KEAIEMF-EKMRASGL-FPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
EA+ +F + +R G+ FPD T +L A + + G + + T G+ D A
Sbjct: 203 DEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKT-GMKLDPAVG 261
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
++ L G++ A ++ ++P + + +VW A++ G + + +QL+ELG
Sbjct: 262 CGLITLYSNCGYIRMAKAVFDQIPDR-NVIVWSAIIRCYGMHGFAQEALSMFRQLVELGL 320
Query: 243 YDSGLYVL 250
+ G+ L
Sbjct: 321 HLDGIVFL 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P +N + W++II C+ G EA+ +F ++ G+ D +S+LS+CSH G G
Sbjct: 284 IPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACSHAGMHEEG 343
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALAL 120
+ + ++++ + G L+ AM++ MP Q + ++GA +
Sbjct: 344 WHLFQTMETYGVVKGEAHYACMVDLLGRAGNLEKAMELIQSMPIQPGKNVYGALLGASRI 403
Query: 121 HGSGKEAIEMFEKMRASGLF 140
H + IE+ E + A LF
Sbjct: 404 HKN----IELAE-LAAEKLF 418
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 187/322 (58%), Gaps = 1/322 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ ++WN++I+ + E++ +F +M G P+ T S++++C+++ L G
Sbjct: 271 MTQKDTITWNTLIA-GFETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCG 329
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H I + ++ L N+L++MYAKCG + + IF GM N+VSW ++ H
Sbjct: 330 QQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAH 389
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G GKEA+++F +M SG+ PD+I F +LSACSH+GLV+ G YF LM+S + ++PD
Sbjct: 390 GHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDI 449
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YAC+VDLL R G + EA LI+ +P KPD +W ALLGACK + + K ++LE+
Sbjct: 450 YACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMK 509
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+G YVLLSN + W D +RK+M + KK S IE+ F+V D
Sbjct: 510 PNKAGTYVLLSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFD 569
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+ + +++ L+ H+K GY
Sbjct: 570 SSNKEVCEVLELLIRHMKDAGY 591
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 132/293 (45%), Gaps = 38/293 (12%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
KNAVSW ++I+ + + +F +M + + +S+C+ +G LGK+
Sbjct: 172 TKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQ 231
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + ++ ++ + N++++MY +C A +F M QK+ ++WN +I S
Sbjct: 232 VHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLDS 291
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
E++ +F +M + G P+ TFT +++AC++ ++ G+ G + G+ ++
Sbjct: 292 -YESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHR-GLDNNLELSN 349
Query: 184 CMVDLLGRGG--------FLG-----------------------EAMSLIQKL---PMKP 209
++D+ + G F G EA+ L ++ +KP
Sbjct: 350 ALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKP 409
Query: 210 DAVVWGALLGACKTFGNLEMGKQILKQLLELGRY--DSGLYVLLSNMYSESQR 260
D +V+ A+L AC G ++ G + + + D +Y + ++ S + R
Sbjct: 410 DKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGR 462
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 4/229 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ ++W S+I+ + H+ A +F M GV P+ T+ ++L +C + L G
Sbjct: 67 MPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPNAFTVSAVLKACKSLKALLCG 126
Query: 62 KKAHDY-ICDNNITVSVTLCNSLMNMYAKC-GALQTAMDIFFGMPQKNVVSWNVIIGALA 119
K H I S+ + N+LM+MYA C ++ A +F + KN VSW +I
Sbjct: 127 KLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKNAVSWTTLITGYT 186
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+ +F +M +F+ +SAC+ G +G+ + + G ++
Sbjct: 187 HRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVIN-HGFESNL 245
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
++D+ R EA L ++ K D + W L+ +T + E
Sbjct: 246 PVMNAILDMYCRCRCASEAKQLFGEMTQK-DTITWNTLIAGFETLDSYE 293
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 184/323 (56%), Gaps = 1/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ ++W + S + G E+M +F M SG PD LV IL++ S +G L
Sbjct: 341 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 400
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H ++ N + + SL+ +YAKC +++ A +F GM K+VV+W+ II A H
Sbjct: 401 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 460
Query: 122 GSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G+EA+++F +M S P+ +TF +LSACSHSGL++ G F +M + + + P+
Sbjct: 461 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 520
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYA MVDLLGR G L A+ +I +PM+ +WGALLGAC+ N++MG+ K L L
Sbjct: 521 HYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 580
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+G Y+LLSN+YS + W K+R+++ + + K S +E+ F+ D+
Sbjct: 581 DPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRI 640
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H+ S IY ++ +L ++ V +
Sbjct: 641 HDESDHIYEILTKLHAKMREVAF 663
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALG 61
P + V W SIIS + Q G A+ F RM VS V PD TLVS+ S+C+ + + LG
Sbjct: 139 PKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLG 198
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H ++ + + L NSL+++Y K G+++ A ++F M K+++SW+ ++ A +
Sbjct: 199 RSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADN 258
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ + +++F +M + P+ +T +L AC+ +E G L + +G +
Sbjct: 259 GAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHEL-AVNYGFEMETTV 317
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D+ + +A+ L ++P K D + W L G + + + +L G
Sbjct: 318 STALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG 376
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 125/242 (51%), Gaps = 5/242 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ +SW+++++C+ G + ++LF M + P+ T+VS+L +C+ + +L G
Sbjct: 240 MSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG 299
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H+ + + T+ +LM+MY KC + + A+D+F MP+K+V++W V+ A +
Sbjct: 300 MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADN 359
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E++ +F M +SG PD I +L+ S G+++ + G +
Sbjct: 360 GMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQFI 418
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
A ++++ + + +A + + + K D V W +++ A +G G++ LK ++
Sbjct: 419 GASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAA---YGFHGQGEEALKLFYQMA 474
Query: 242 RY 243
+
Sbjct: 475 NH 476
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 9/225 (4%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGV----MPDNATLVSILSSCSHMGD 57
P + WN+++ + EG+ E + LF +M VS V PDN ++ L SC+ +
Sbjct: 33 PHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRK 92
Query: 58 LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
L LGK H ++ I + + ++L+++Y KCG + A+ +F P+ +VV W II
Sbjct: 93 LLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISG 152
Query: 118 LALHGSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
GS + A+ F +M S + PD +T + SAC+ ++GR G + G+
Sbjct: 153 YEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRK-GLD 211
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
+ ++ L G+ G + A +L +++ K D + W ++ AC
Sbjct: 212 NKLCLANSLLHLYGKTGSIKNASNLFREMSDK-DIISWSTMV-AC 254
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 184/323 (56%), Gaps = 1/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ ++W + S + G E+M +F M SG PD LV IL++ S +G L
Sbjct: 341 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 400
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H ++ N + + SL+ +YAKC +++ A +F GM K+VV+W+ II A H
Sbjct: 401 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 460
Query: 122 GSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G+EA+++F +M S P+ +TF +LSACSHSGL++ G F +M + + + P+
Sbjct: 461 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 520
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYA MVDLLGR G L A+ +I +PM+ +WGALLGAC+ N++MG+ K L L
Sbjct: 521 HYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 580
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+G Y+LLSN+YS + W K+R+++ + + K S +E+ F+ D+
Sbjct: 581 DPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRI 640
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H+ S IY ++ +L ++ V +
Sbjct: 641 HDESDHIYEILTKLHAKMREVAF 663
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALG 61
P + V W SIIS + Q G A+ F RM VS V PD TLVS+ S+C+ + + LG
Sbjct: 139 PKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLG 198
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H ++ + + L NSL+++Y K G+++ A ++F M K+++SW+ ++ A +
Sbjct: 199 RSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADN 258
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ + +++F +M + P+ +T +L AC+ +E G L + +G +
Sbjct: 259 GAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHEL-AVNYGFEMETTV 317
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D+ + +A+ L ++P K D + W L G + + + +L G
Sbjct: 318 STALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG 376
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 125/242 (51%), Gaps = 5/242 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ +SW+++++C+ G + ++LF M + P+ T+VS+L +C+ + +L G
Sbjct: 240 MSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG 299
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H+ + + T+ +LM+MY KC + + A+D+F MP+K+V++W V+ A +
Sbjct: 300 MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADN 359
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E++ +F M +SG PD I +L+ S G+++ + G +
Sbjct: 360 GMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQFI 418
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
A ++++ + + +A + + + K D V W +++ A +G G++ LK ++
Sbjct: 419 GASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAA---YGFHGQGEEALKLFYQMA 474
Query: 242 RY 243
+
Sbjct: 475 NH 476
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 9/225 (4%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGV----MPDNATLVSILSSCSHMGD 57
P + WN+++ + EG+ E + LF +M VS V PDN ++ L SC+ +
Sbjct: 33 PHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRK 92
Query: 58 LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
L LGK H ++ I + + ++L+++Y KCG + A+ +F P+ +VV W II
Sbjct: 93 LLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISG 152
Query: 118 LALHGSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
GS + A+ F +M S + PD +T + SAC+ ++GR G + G+
Sbjct: 153 YEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRK-GLD 211
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
+ ++ L G+ G + A +L +++ K D + W ++ AC
Sbjct: 212 NKLCLANSLLHLYGKTGSIKNASNLFREMSDK-DIISWSTMV-AC 254
>Medtr3g080230.1 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 177/285 (62%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSW ++S + + + E ++LF M ++GV PD T++S++S+C+ +GD +G
Sbjct: 201 MPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMG 260
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H ++ +N V LCNSL++MY KCG L+ A +F +K++++WN ++ A H
Sbjct: 261 RMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANH 320
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++A +FE M SG+ PD +T LL A +H G V+ G F M +G+ P + H
Sbjct: 321 GYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEH 380
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y +VD+LGR G L EA +L+ +P+ + V+WGALLGAC+ G++ MG++++K+LLEL
Sbjct: 381 YGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKLLELK 440
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
+ G Y+LL ++Y + R + ++R+ M SG +K S +E
Sbjct: 441 PDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWVE 485
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 35/282 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSS---------- 51
MP +N++I H + + F RM + + PD + +L S
Sbjct: 67 MPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLLKSRSFTMPLVHD 126
Query: 52 ----------CSHM-------------GDLALGKKAHDYICDNNITVSVTLCNSLMNMYA 88
C H+ G +K + + V + + L+ +A
Sbjct: 127 IHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHA 186
Query: 89 KCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
K G L A +F GMP+++VVSW +++ A + E +++F++MR +G++PDE+T
Sbjct: 187 KAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLS 246
Query: 149 LLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK 208
++SAC+ G EMGR + G VA ++D+ G+ G L EA + + K
Sbjct: 247 VISACAELGDAEMGRMVHKFVEEN-GFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRK 305
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL 250
+ W A++ C G E ++ + ++ G G+ +L
Sbjct: 306 -SLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTIL 346
>Medtr3g080230.2 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 177/285 (62%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSW ++S + + + E ++LF M ++GV PD T++S++S+C+ +GD +G
Sbjct: 201 MPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMG 260
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H ++ +N V LCNSL++MY KCG L+ A +F +K++++WN ++ A H
Sbjct: 261 RMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANH 320
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++A +FE M SG+ PD +T LL A +H G V+ G F M +G+ P + H
Sbjct: 321 GYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEH 380
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y +VD+LGR G L EA +L+ +P+ + V+WGALLGAC+ G++ MG++++K+LLEL
Sbjct: 381 YGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKLLELK 440
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
+ G Y+LL ++Y + R + ++R+ M SG +K S +E
Sbjct: 441 PDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWVE 485
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 35/282 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSS---------- 51
MP +N++I H + + F RM + + PD + +L S
Sbjct: 67 MPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLLKSRSFTMPLVHD 126
Query: 52 ----------CSHM-------------GDLALGKKAHDYICDNNITVSVTLCNSLMNMYA 88
C H+ G +K + + V + + L+ +A
Sbjct: 127 IHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHA 186
Query: 89 KCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
K G L A +F GMP+++VVSW +++ A + E +++F++MR +G++PDE+T
Sbjct: 187 KAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLS 246
Query: 149 LLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK 208
++SAC+ G EMGR + G VA ++D+ G+ G L EA + + K
Sbjct: 247 VISACAELGDAEMGRMVHKFVEEN-GFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRK 305
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL 250
+ W A++ C G E ++ + ++ G G+ +L
Sbjct: 306 -SLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTIL 346
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 184/323 (56%), Gaps = 1/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ ++W + S + G E+M +F M SG PD LV IL++ S +G L
Sbjct: 371 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 430
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H ++ N + + SL+ +YAKC +++ A +F GM K+VV+W+ II A H
Sbjct: 431 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 490
Query: 122 GSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G+EA+++F +M S P+ +TF +LSACSHSGL++ G F +M + + + P+
Sbjct: 491 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYA MVDLLGR G L A+ +I +PM+ +WGALLGAC+ N++MG+ K L L
Sbjct: 551 HYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 610
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+G Y+LLSN+YS + W K+R+++ + + K S +E+ F+ D+
Sbjct: 611 DPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRI 670
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H+ S IY ++ +L ++ V +
Sbjct: 671 HDESDHIYEILTKLHAKMREVAF 693
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALG 61
P + V W SIIS + Q G A+ F RM VS V PD TLVS+ S+C+ + + LG
Sbjct: 169 PKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLG 228
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H ++ + + L NSL+++Y K G+++ A ++F M K+++SW+ ++ A +
Sbjct: 229 RSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADN 288
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ + +++F +M + P+ +T +L AC+ +E G L + +G +
Sbjct: 289 GAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHEL-AVNYGFEMETTV 347
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D+ + +A+ L ++P K D + W L G + + + +L G
Sbjct: 348 STALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG 406
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 125/242 (51%), Gaps = 5/242 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ +SW+++++C+ G + ++LF M + P+ T+VS+L +C+ + +L G
Sbjct: 270 MSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG 329
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H+ + + T+ +LM+MY KC + + A+D+F MP+K+V++W V+ A +
Sbjct: 330 MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADN 389
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E++ +F M +SG PD I +L+ S G+++ + G +
Sbjct: 390 GMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQFI 448
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
A ++++ + + +A + + + K D V W +++ A +G G++ LK ++
Sbjct: 449 GASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAA---YGFHGQGEEALKLFYQMA 504
Query: 242 RY 243
+
Sbjct: 505 NH 506
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 9/225 (4%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGV----MPDNATLVSILSSCSHMGD 57
P + WN+++ + EG+ E + LF +M VS V PDN ++ L SC+ +
Sbjct: 63 PHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRK 122
Query: 58 LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
L LGK H ++ I + + ++L+++Y KCG + A+ +F P+ +VV W II
Sbjct: 123 LLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISG 182
Query: 118 LALHGSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
GS + A+ F +M S + PD +T + SAC+ ++GR G + G+
Sbjct: 183 YEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRK-GLD 241
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
+ ++ L G+ G + A +L +++ K D + W ++ AC
Sbjct: 242 NKLCLANSLLHLYGKTGSIKNASNLFREMSDK-DIISWSTMV-AC 284
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 72/158 (45%), Gaps = 7/158 (4%)
Query: 86 MYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF----- 140
+YA+ ++ A +F P + V WN ++ + G E + +F +M
Sbjct: 45 LYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEER 104
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
PD + + L +C+ + +G+ G + I D+ + ++DL + G + +A+
Sbjct: 105 PDNYSVSIALKSCAGLRKLLLGKVIHGFLKKV-RIDGDMFVGSALIDLYTKCGQMNDAVK 163
Query: 201 LIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ + P KPD V+W +++ + G+ E+ +++
Sbjct: 164 VFMEYP-KPDVVLWTSIISGYEQSGSPELALAFFSRMV 200
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 184/323 (56%), Gaps = 1/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ ++W + S + G E+M +F M SG PD LV IL++ S +G L
Sbjct: 371 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 430
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H ++ N + + SL+ +YAKC +++ A +F GM K+VV+W+ II A H
Sbjct: 431 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 490
Query: 122 GSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G+EA+++F +M S P+ +TF +LSACSHSGL++ G F +M + + + P+
Sbjct: 491 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYA MVDLLGR G L A+ +I +PM+ +WGALLGAC+ N++MG+ K L L
Sbjct: 551 HYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 610
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+G Y+LLSN+YS + W K+R+++ + + K S +E+ F+ D+
Sbjct: 611 DPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRI 670
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H+ S IY ++ +L ++ V +
Sbjct: 671 HDESDHIYEILTKLHAKMREVAF 693
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALG 61
P + V W SIIS + Q G A+ F RM VS V PD TLVS+ S+C+ + + LG
Sbjct: 169 PKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLG 228
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H ++ + + L NSL+++Y K G+++ A ++F M K+++SW+ ++ A +
Sbjct: 229 RSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADN 288
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ + +++F +M + P+ +T +L AC+ +E G L + +G +
Sbjct: 289 GAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHEL-AVNYGFEMETTV 347
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D+ + +A+ L ++P K D + W L G + + + +L G
Sbjct: 348 STALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG 406
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 125/242 (51%), Gaps = 5/242 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ +SW+++++C+ G + ++LF M + P+ T+VS+L +C+ + +L G
Sbjct: 270 MSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG 329
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H+ + + T+ +LM+MY KC + + A+D+F MP+K+V++W V+ A +
Sbjct: 330 MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADN 389
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E++ +F M +SG PD I +L+ S G+++ + G +
Sbjct: 390 GMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQFI 448
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
A ++++ + + +A + + + K D V W +++ A +G G++ LK ++
Sbjct: 449 GASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAA---YGFHGQGEEALKLFYQMA 504
Query: 242 RY 243
+
Sbjct: 505 NH 506
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 9/225 (4%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGV----MPDNATLVSILSSCSHMGD 57
P + WN+++ + EG+ E + LF +M VS V PDN ++ L SC+ +
Sbjct: 63 PHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRK 122
Query: 58 LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
L LGK H ++ I + + ++L+++Y KCG + A+ +F P+ +VV W II
Sbjct: 123 LLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISG 182
Query: 118 LALHGSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
GS + A+ F +M S + PD +T + SAC+ ++GR G + G+
Sbjct: 183 YEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRK-GLD 241
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
+ ++ L G+ G + A +L +++ K D + W ++ AC
Sbjct: 242 NKLCLANSLLHLYGKTGSIKNASNLFREMSDK-DIISWSTMV-AC 284
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 72/158 (45%), Gaps = 7/158 (4%)
Query: 86 MYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF----- 140
+YA+ ++ A +F P + V WN ++ + G E + +F +M
Sbjct: 45 LYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEER 104
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
PD + + L +C+ + +G+ G + I D+ + ++DL + G + +A+
Sbjct: 105 PDNYSVSIALKSCAGLRKLLLGKVIHGFLKKV-RIDGDMFVGSALIDLYTKCGQMNDAVK 163
Query: 201 LIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ + P KPD V+W +++ + G+ E+ +++
Sbjct: 164 VFMEYP-KPDVVLWTSIISGYEQSGSPELALAFFSRMV 200
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 188/325 (57%), Gaps = 2/325 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M ++ VSWNS+IS ++ G +AM+L M G D T ++LS+C+ + L
Sbjct: 603 MSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLER 662
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H + V + ++L++MYAKCG + A F MP +N+ SWN +I A
Sbjct: 663 GMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYAR 722
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G++A+++F +M+ G PD +TF G+LSACSH GLV+ G +F M +G+SP +
Sbjct: 723 HGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIE 782
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA-CKTFG-NLEMGKQILKQLL 238
H++CMVDLLGR G + + I+ +PM P+ ++W +LGA C+ G N E+G++ K L+
Sbjct: 783 HFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLI 842
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
EL ++ YVLLSNM++ W+D+ + R M + +KK S + + + F+ D
Sbjct: 843 ELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGD 902
Query: 299 KNHEVSTSIYSMVDQLMDHLKSVGY 323
+ H IY + +LM+ ++ GY
Sbjct: 903 QTHPEKEKIYEKLKELMNKIRDAGY 927
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 131/248 (52%), Gaps = 2/248 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP K+ VSWNS+IS + EA+ F M +G++P N +++S LSSCS +G L L
Sbjct: 399 LMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTL 458
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ H + + V++ N+L+ +YA+ ++ +FF MP+ + VSWN IGALA
Sbjct: 459 GRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAK 518
Query: 121 H-GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+ S +A++ F +M +G P+ +TF +L+A S ++ +G L+ + ++ D
Sbjct: 519 YEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILK-YSVADDN 577
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
A ++ G+ + + + ++ + D V W +++ G L ++ +++
Sbjct: 578 AIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQ 637
Query: 240 LGRYDSGL 247
G+ G
Sbjct: 638 RGQKLDGF 645
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 121/241 (50%), Gaps = 10/241 (4%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK- 63
+NAV+ N ++ ++ Q EA ++F M V ++ +LV +LS+ + +L GK+
Sbjct: 298 RNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINSESLVVLLSTFTEFSNLKEGKRK 356
Query: 64 ---AHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
H Y+ + + +++ N+L+NMY KC A+ A +F MP K+ VSWN +I L
Sbjct: 357 GQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLD 416
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+ +EA+ F M+ +G+ P + LS+CS G + +GR G +G+ DV
Sbjct: 417 HNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHG-EGFKWGLDLDV 475
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ ++ L + E + ++P + D V W + +GA + + Q LK LE
Sbjct: 476 SVSNALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGALAKYEASVL--QALKYFLE 532
Query: 240 L 240
+
Sbjct: 533 M 533
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 133/275 (48%), Gaps = 13/275 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD--LA 59
MP KN VSW+ +IS + Q EA LF + SG++P++ + S L +C G +
Sbjct: 84 MPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIK 143
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKC-GALQTAMDIFFGMPQKNVVSWNVIIGAL 118
LG + H +IC + L N LM+MY+ C G++ A +F + +N V+WN II
Sbjct: 144 LGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVY 203
Query: 119 ALHGSGKEAIEMFEKMRASG----LFPDEITFTGLLS-ACSHS--GLVEMGRYYFGLMSS 171
G A ++F M+ G L P+E T L++ ACS + GLV + + + S
Sbjct: 204 CRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKS 263
Query: 172 TFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGK 231
G D+ + +V+ R G + A + +++ + + G ++G + E K
Sbjct: 264 --GFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAK 321
Query: 232 QILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKK 266
+ K++ +L +S V+L + ++E + K+
Sbjct: 322 -VFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKR 355
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 4/243 (1%)
Query: 2 MPVKNAVSWNSIISCHVQ-EGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MP + VSWNS I + E +A++ F M +G P+ T ++IL++ S L L
Sbjct: 501 MPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGL 560
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALA 119
G + H I ++ + N+L+ Y KC ++ IF M ++ + VSWN +I
Sbjct: 561 GHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYL 620
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G +A+++ M G D TF +LSAC+ +E G + DV
Sbjct: 621 HSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRA-CLESDV 679
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ +VD+ + G + A + +P++ + W +++ G+ + +I ++ +
Sbjct: 680 VVGSALVDMYAKCGKIDYASRFFELMPVR-NIYSWNSMISGYARHGHGQKALKIFTRMKQ 738
Query: 240 LGR 242
G+
Sbjct: 739 HGQ 741
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%)
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + T V CN+L+N+Y + G L +A +F MPQKN+VSW+ +I +
Sbjct: 46 HLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMP 105
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSG 157
EA +F+ + +SGL P+ L AC G
Sbjct: 106 DEACSLFKGVISSGLLPNHFAVGSALRACQQCG 138
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 168/285 (58%), Gaps = 1/285 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N VSW ++IS +VQ + +A++LF M + P++ T S+L +C+ L +G
Sbjct: 229 MSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMG 288
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H I + I V SL++MYAKCG + A +F + KN+VSWN IIG A H
Sbjct: 289 LQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASH 348
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G A+E F++M+ G PDE+TF +LSAC H+GLVE G +F M + +GI ++ H
Sbjct: 349 GLATRALEEFDRMKVVGT-PDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEH 407
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+CMVDL GR G EA +LI+ +P +PD V+WGALL AC NLE+G+ +++ L
Sbjct: 408 YSCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLE 467
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
Y +LS + E W + ++R M + GIKK AIS +E
Sbjct: 468 SSHPVSYSVLSKIQGEKGVWSSVNELRDTMKERGIKKQTAISWVE 512
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 6/187 (3%)
Query: 39 MPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMD 98
M D + +++SS +G + A D + NI TL N Y K + A
Sbjct: 169 MKDVTSWNALVSSYMELGKFVDAQTAFDQMPQRNIISWTTLVNG----YVKNKQVNKARS 224
Query: 99 IFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGL 158
+F M ++NVVSW +I + +A+++F M + P+ TF+ +L AC+ S
Sbjct: 225 VFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSS 284
Query: 159 VEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ MG + + GI+ DV +VD+ + G + A + + + K + V W A++
Sbjct: 285 LIMGLQLHPCIIKS-GIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDK-NLVSWNAII 342
Query: 219 GACKTFG 225
G + G
Sbjct: 343 GGYASHG 349
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+AH + +N ++ ++ N +M Y + + D+F MP K+ VSWN+++
Sbjct: 25 KQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIMLSGFQRT 84
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR------YYFGLMSSTFGI 175
+ + F +M +G+ P++ T + LL A + L + R ++ G + F
Sbjct: 85 RNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQVHALAFHLGHYLNVFVG 144
Query: 176 SPDVAHYACMV--DLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
S + YA + + LGR + MK D W AL+ + G +
Sbjct: 145 SSLIRAYAGLKEEEALGRA---------FNDISMK-DVTSWNALVSSYMELGKFVDAQTA 194
Query: 234 LKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMND 273
Q+ + + L N Y ++++ + K R + +D
Sbjct: 195 FDQMPQRNIIS---WTTLVNGYVKNKQ---VNKARSVFDD 228
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 191/319 (59%), Gaps = 1/319 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V W ++ S + Q+ ++ E+++L+ + +S + P+ T +++++ S++ L G++
Sbjct: 508 KDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQF 567
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H+ + + N+L++MYAK G+++ A F K+ WN +I A HG
Sbjct: 568 HNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEA 627
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
++A+++FE M GL P+ +TF G+LSACSH+GL+++G +F MS FGI P + HY C
Sbjct: 628 EKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQ-FGIEPGIEHYVC 686
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MV LLGR G L EA I+K+P+K AVVW +LL AC+ GN+E+G + + D
Sbjct: 687 MVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPAD 746
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
SG YVLLSN+++ W +++++R+ M+ SG+ K S IE++ ++F+ D H S
Sbjct: 747 SGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDS 806
Query: 305 TSIYSMVDQLMDHLKSVGY 323
I ++D L+ +K GY
Sbjct: 807 APISLVLDNLLLQIKGFGY 825
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 146/314 (46%), Gaps = 44/314 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ VK + +W +II+ + ++G+ +++LF +M V PD L S+LS+C + L G
Sbjct: 202 LQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGG 261
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H Y+ + I + V++ N ++ Y KC +Q +F M KNVVSW +I +
Sbjct: 262 KQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQN 321
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACS--------------------------H 155
++A+++F +M G PD T +L++C
Sbjct: 322 SFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVK 381
Query: 156 SGLVEM---------GRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP 206
+GL++M R F LM++ D+ Y M++ R L EA+ L +++
Sbjct: 382 NGLIDMYAKCDSLTDARKVFNLMAAI-----DLVSYNAMIEGYSRQDKLCEALDLFREMR 436
Query: 207 M---KPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWD 262
+ P +++ +LLG + +LE+ QI +++ G D L ++YS+ R
Sbjct: 437 LSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVG 496
Query: 263 DMKKIRKIMNDSGI 276
D + + + + D I
Sbjct: 497 DARLVFEEIQDKDI 510
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 137/298 (45%), Gaps = 38/298 (12%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN VSW ++I+ +Q H +A++LF M G PD S+L+SC + L G++
Sbjct: 306 KNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQV 365
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H Y NI + N L++MYAKC +L A +F M ++VS+N +I +
Sbjct: 366 HAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKL 425
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA+++F +MR S P + F LL + +E+ GL+ +G+S D +
Sbjct: 426 CEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIK-YGVSLDEFAGSA 484
Query: 185 MVDLLGRGGFLGEAMSLIQKLP----------------------------------MKPD 210
++D+ + +G+A + +++ +KP+
Sbjct: 485 LIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPN 544
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMKK 266
+ A++ A +L G+Q Q++++G +D +V L +MY++S ++ K
Sbjct: 545 EFTFAAVITAASNIASLRHGQQFHNQVIKMG-FDDDPFVANTLVDMYAKSGSIEEAHK 601
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 132/306 (43%), Gaps = 37/306 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLAL 60
M KN V+W+S++S + EA+ LF + S P+ L S++ +C+ G L
Sbjct: 100 MSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNP 159
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H + V +C SL++ Y K + A +F G+ K +W II +
Sbjct: 160 ALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSK 219
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR----------------- 163
G + ++++F++M+ + PD+ + +LSAC +E G+
Sbjct: 220 QGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSM 279
Query: 164 ------YYFGLMSSTFG-------ISPDVAHYACMVDLLGRGGFLGEAMSL---IQKLPM 207
+YF G + +V + ++ + F +A+ L + ++
Sbjct: 280 VNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGW 339
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL--LSNMYSESQRWDDMK 265
PDA ++L +C + LE G+Q+ +++ D+ +V L +MY++ D +
Sbjct: 340 NPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVN-IDNDDFVKNGLIDMYAKCDSLTDAR 398
Query: 266 KIRKIM 271
K+ +M
Sbjct: 399 KVFNLM 404
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 116/242 (47%), Gaps = 4/242 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M + VS+N++I + ++ + EA++LF M +S P VS+L + + L L
Sbjct: 403 LMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLEL 462
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H I +++ ++L+++Y+KC + A +F + K++V W +
Sbjct: 463 SNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQ 522
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDV 179
+E++++++ ++ S L P+E TF +++A S+ + G+ + ++ F P V
Sbjct: 523 QSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFV 582
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
A+ +VD+ + G + EA K D W +++ G E Q+ + ++
Sbjct: 583 AN--TLVDMYAKSGSIEEAHKAFISTNWK-DTACWNSMIATYAQHGEAEKALQVFEDMIM 639
Query: 240 LG 241
G
Sbjct: 640 EG 641
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 3/164 (1%)
Query: 77 VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMF-EKMR 135
+ L N+L++ Y+K + A +F M KN+V+W+ ++ H EA+ +F + MR
Sbjct: 74 IFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMR 133
Query: 136 ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFL 195
+ P+E ++ AC+ G + GL+ G DV ++D + +
Sbjct: 134 SCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKG-GYVQDVYVCTSLIDFYTKHACI 192
Query: 196 GEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+A L L +K + W ++ G ++ ++ Q+ E
Sbjct: 193 DDARLLFDGLQVKT-SFTWTTIIAGYSKQGRSQVSLKLFDQMKE 235
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 184/321 (57%), Gaps = 3/321 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN VSW S+++ VQ + A +F ++ V P + + S+LS+C+ +G L LG+
Sbjct: 274 KNVVSWCSMLTALVQNHEEERACMVFLQV-RKEVEPTDFMISSVLSACAELGGLELGRSV 332
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + ++ + ++L+++Y KCG+++ A +F +P+ N+V+WN +IG A G
Sbjct: 333 HALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSELPESNLVTWNAMIGGYAHQGDI 392
Query: 125 KEAIEMFEKMR--ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
A+ +FE+M + G+ P +T +LS CS G VE G F M +GI P H+
Sbjct: 393 DMALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHF 452
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
AC+VDLLGR G + A IQ +P++P VWGALLGAC+ G E+GK ++L EL
Sbjct: 453 ACVVDLLGRSGLVDRAYEFIQNMPIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDH 512
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHE 302
DSG +V+LSNM + + RW++ +RK M D GIKK S I + + F D +H+
Sbjct: 513 VDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHD 572
Query: 303 VSTSIYSMVDQLMDHLKSVGY 323
++ I +M+ +L +K GY
Sbjct: 573 RNSEIQAMLGKLRGGMKEAGY 593
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 135/261 (51%), Gaps = 6/261 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCR-MCVSGVMPDNATLVSILSSCSHMGDLAL 60
MP +N +WN+ IS VQ+ + + + F +CV G P++ T + L++C M L L
Sbjct: 169 MPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVHG-EPNSITFCAFLNACVDMMRLNL 227
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM-PQKNVVSWNVIIGALA 119
G++ H +I V++ N L++ Y KCG + +A +F + +KNVVSW ++ AL
Sbjct: 228 GRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALV 287
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+ + A +F ++R + P + + +LSAC+ G +E+GR L + ++
Sbjct: 288 QNHEEERACMVFLQVRKE-VEPTDFMISSVLSACAELGGLELGRSVHALAVKA-CVKDNI 345
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ +VDL G+ G + A + +LP + + V W A++G G+++M ++ +++
Sbjct: 346 FVGSALVDLYGKCGSIENAEQVFSELP-ESNLVTWNAMIGGYAHQGDIDMALRLFEEMTL 404
Query: 240 LGRYDSGLYVLLSNMYSESQR 260
R YV L ++ S R
Sbjct: 405 GSRGIRPSYVTLVSILSVCSR 425
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 1/217 (0%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
++ V+W S+IS V + A+ F M V P++ T + + + M GK+
Sbjct: 70 LRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASALMQIPMTGKQ 129
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + V + S +MY K G A ++F MP +N+ +WN I
Sbjct: 130 IHGLALKGGMIYDVFVGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQDRR 189
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+ I F++ P+ ITF L+AC + +GR + G DV+
Sbjct: 190 SLDVIAAFKEFLCVHGEPNSITFCAFLNACVDMMRLNLGRQLHAFIVRC-GYKEDVSVAN 248
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
++D G+ G + A + ++ + + V W ++L A
Sbjct: 249 GLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTA 285
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 60 LGKKAHDYICDNNIT-VSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
LG+ H +I ++T + L N L+NMY+K L +A + + VV+W +I
Sbjct: 24 LGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSFTHLRTVVTWTSLISGC 83
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
+ A+ F MR + P++ TF + A + + G+ GL + G+ D
Sbjct: 84 VHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASALMQIPMTGKQIHGL-ALKGGMIYD 142
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
V D+ + GF G+A ++ ++P + + W A +
Sbjct: 143 VFVGCSCFDMYCKTGFHGDACNMFDEMPHR-NLATWNAYI 181
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 185/318 (58%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++N V+WN++I G E M+L M G +PD T+ SI+SSC + +
Sbjct: 331 MSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITET 390
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + +++ NSL++ Y+KCG++ +A F Q ++V+W +I A A H
Sbjct: 391 LQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFH 450
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +++ EMFEKM + G+ PD I F G+LSAC+H GLV G +YF LM++ + I PD H
Sbjct: 451 GLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEH 510
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C+VDLLGR G + EA +++ +P++ D+ GA +G+CK N+E+ K ++L +
Sbjct: 511 YTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGSCKLHSNMELAKLAAEKLFLIE 570
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
S Y ++SN+++ + W D+++IRK M D K S IEI + F+ +DK+H
Sbjct: 571 PEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDAKVPGCSWIEIGNQIHSFVSNDKSH 630
Query: 302 EVSTSIYSMVDQLMDHLK 319
+ +Y ++ L+ +K
Sbjct: 631 PNALEMYVTLNMLLRPMK 648
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 12/243 (4%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSH--MGDLALGK 62
++ V WN ++SC+V EA +F M + V D T S+LS S + GK
Sbjct: 231 RDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGK 290
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ H + + V + ++L+NMYAK + A +F M +NVV+WN +I HG
Sbjct: 291 QVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHG 350
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
G E +++ ++M G PDE+T + ++S+C ++ + L F + +
Sbjct: 351 DGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITE-----TLQVHAFAVKLSCQDF 405
Query: 183 ACMVDLL----GRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ + L + G + A + L +PD V W +L+ A G E ++ +++L
Sbjct: 406 LSVANSLISAYSKCGSITSAFKCFE-LTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKML 464
Query: 239 ELG 241
G
Sbjct: 465 SYG 467
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 118/249 (47%), Gaps = 13/249 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEA------MELFCRMCVSGVMPDNATLVSILSSCSHM 55
+PV+N VSWN +I V E+ F RM + ++PD+ T ++ C+
Sbjct: 121 LPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQF 180
Query: 56 GDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVII 115
D+ +G + H + + + +L+ +YAKCG ++ A +F + +++V WNV++
Sbjct: 181 NDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMV 240
Query: 116 GALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGL--VEMGRYYFGLMSSTF 173
+ +EA +F MR + DE TF+ LLS S L + G+ L+
Sbjct: 241 SCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQ- 299
Query: 174 GISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
DV + ++++ + + +A + ++ ++ + V W ++ FGN G ++
Sbjct: 300 SFDSDVLVASALINMYAKSENIIDARRVFDEMSIR-NVVAWNTMIVG---FGNHGDGNEV 355
Query: 234 LKQLLELGR 242
+K + E+ R
Sbjct: 356 MKLVKEMLR 364
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 34/232 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP+ N +N + H LFC NA +S + G L G
Sbjct: 45 MPIPNQTHFNDPNTVH-----------LFC---------SNALKIS-----AKKGYLPEG 79
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H ++ ++L N ++++Y KC + A +F +P +NVVSWN++I A
Sbjct: 80 KQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGR 139
Query: 122 GSGKEAIEM------FEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI 175
E+ M F +M + PD ITF GL+ C+ +EMG + G
Sbjct: 140 NDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMG-VQLHCFTVKVGF 198
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNL 227
D +V L + GF+ A + + + D V+W ++ +C F +L
Sbjct: 199 DLDCFVGCALVGLYAKCGFVENARRVFCDVSCR-DLVMWNVMV-SCYVFNSL 248
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 200/319 (62%), Gaps = 6/319 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSW+++++ + + + E ++LF M GV P+++ LV++L++C+H+G L G
Sbjct: 207 MPERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVRPNDSVLVTVLTACAHLGALTQG 266
Query: 62 KKAHDYICD-NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
H Y + ++ + L +L++MY+KCG +++A+ +F G+ K+V +WN +I +AL
Sbjct: 267 MWVHSYARRFDRVSSNPILATALVDMYSKCGCVESALSVFDGISDKDVGAWNAMISGVAL 326
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G ++++E+F++M G P+E TF +L+AC+H+ +V G F MS T+G+ P
Sbjct: 327 NGDARKSLELFQQMIVCGNKPNETTFVAVLTACTHARMVREGLRLFEEMSGTYGVEPCAE 386
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
HYAC+VDLL R G + EA I++ DA VWGA+L AC+ + N+ +G ++ K+L
Sbjct: 387 HYACVVDLLSRSGMVEEAERFIEEKMGGFAAGDANVWGAILNACRIYKNINVGNRVWKKL 446
Query: 238 LELGRYDSGLYVLLSNMYSESQRWD-DMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMV 296
+++G D G +VL N+Y E+ WD + ++R +++++G+KK S IE+ +F+
Sbjct: 447 IDMGVADCGTHVLTYNIYREAG-WDAEANRVRSMISEAGMKKKPGCSIIEVGNEVEEFLA 505
Query: 297 DDKNHEVSTSIYSMVDQLM 315
D++H + + ++D ++
Sbjct: 506 GDQSHPQAQEMCRLLDSIL 524
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
Query: 31 CRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKC 90
C + + G+ D + + S +G+L +KA + D V L ++++ Y K
Sbjct: 139 CHVVLFGLTNDAYVVSGFIEFYSALGEL---RKAR-VLFDQTGRKDVVLWTAMIDGYGKI 194
Query: 91 GALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
G +++A ++F MP++NVVSW+ ++ A + +E +++F +M++ G+ P++ +L
Sbjct: 195 GDVESAREMFDEMPERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVRPNDSVLVTVL 254
Query: 151 SACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPD 210
+AC+H G + G + +S + +VD+ + G + A+S+ + K D
Sbjct: 255 TACAHLGALTQGMWVHSYARRFDRVSSNPILATALVDMYSKCGCVESALSVFDGISDK-D 313
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLELG 241
W A++ G+ ++ +Q++ G
Sbjct: 314 VGAWNAMISGVALNGDARKSLELFQQMIVCG 344
>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38663296-38660628 | 20130731
Length = 745
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 190/322 (59%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP N V+WN++++ Q ++ +C M ++G PD T VS++SSCS + L G
Sbjct: 265 MPNCNLVAWNTLMAGKAQNRCFEGVLDHYCMMKMAGYRPDKITFVSVISSCSELATLCQG 324
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + + V++ +SL++MY+KCG+LQ ++ F +++VV W+ +I A H
Sbjct: 325 KQIHAEVIKAGASSVVSVISSLVSMYSKCGSLQDSIKAFLECEERDVVIWSSMIAAYGFH 384
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++AI++F + +E+TF LL ACSHSGL + G +F +M +G+ + H
Sbjct: 385 GQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEH 444
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C+VDLLGR G L EA ++I+ +P+ DA++W LL ACK N EM +++ +++L +
Sbjct: 445 YTCVVDLLGRSGCLEEAETMIRSMPVSADAIIWKTLLSACKIHKNEEMARRVAEEVLRID 504
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
D YVL++ +++ ++RW ++ ++R+ M D +KK +S +E+ +QF DK+H
Sbjct: 505 PQDPASYVLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPGVSWVEVKNQVHQFHTGDKSH 564
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
I +++L +K GY
Sbjct: 565 PKFVEINQYLEELTSEMKMQGY 586
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 89/162 (54%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N +WN++++ V+ G + EA+ LF RM V G +PD + S+L C+H+ L +G
Sbjct: 164 MTERNVATWNAMVTGLVKFGLNEEALLLFSRMNVLGFVPDEYSFGSVLRGCAHLRALFVG 223
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H Y+ + + SL +MY K G+L I MP N+V+WN ++ A +
Sbjct: 224 EQVHAYVAKCGFEFNSVVGCSLAHMYMKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQN 283
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR 163
+ ++ + M+ +G PD+ITF ++S+CS + G+
Sbjct: 284 RCFEGVLDHYCMMKMAGYRPDKITFVSVISSCSELATLCQGK 325
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 99/263 (37%), Gaps = 67/263 (25%)
Query: 45 LVSIL-SSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM 103
L SIL SC ++LGK+ H I + + + N L+N Y+K G L A+ +F M
Sbjct: 74 LFSILIQSCIPTNSVSLGKQLHSLIFTSGCSSDKFISNHLLNFYSKFGELNNAVKLFDRM 133
Query: 104 P-------------------------------QKNVVSWNVIIGALALHGSGKEAIEMFE 132
P ++NV +WN ++ L G +EA+ +F
Sbjct: 134 PRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLLFS 193
Query: 133 KMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRG 192
+M G PDE +F +L C+H + +G ++ G + + + +
Sbjct: 194 RMNVLGFVPDEYSFGSVLRGCAHLRALFVGEQVHAYVAKC-GFEFNSVVGCSLAHMYMKA 252
Query: 193 GFLGEAMSLIQKLP----------------------------------MKPDAVVWGALL 218
G L +I+ +P +PD + + +++
Sbjct: 253 GSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDHYCMMKMAGYRPDKITFVSVI 312
Query: 219 GACKTFGNLEMGKQILKQLLELG 241
+C L GKQI ++++ G
Sbjct: 313 SSCSELATLCQGKQIHAEVIKAG 335
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 179/288 (62%), Gaps = 1/288 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSW +I + G++ +A+ +F +M GV+P+ T+V+ LS+C+ + +G
Sbjct: 170 MPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMG 229
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
D + N + V L +L++MY KCG ++ + +F M +KNV + NV+I LAL
Sbjct: 230 VWIDDMVRRNGWELDVILGTALIDMYVKCGRVEEGLKVFCDMKEKNVFTLNVVIKGLALA 289
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDVA 180
S +EA+ F +M G+ DE+T +LSACSHSGLVE GR+ F L+ +G P+V
Sbjct: 290 KSVEEALLWFNRMELDGVRADEVTLVTVLSACSHSGLVEKGRFIFSMLVDGKYGFLPNVK 349
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYACMVDLL R G L EA +I+ +P +P A +WG+LL K+ +LE + +L+EL
Sbjct: 350 HYACMVDLLARAGQLQEAFDIIKCMPFEPTAAMWGSLLLGSKSRDDLEFSEFAATKLVEL 409
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEID 288
Y++ YV LSN+Y+E+ RW D+++IR +M + G+ K SS+E++
Sbjct: 410 EPYNTAYYVQLSNLYAEAGRWSDVERIRGMMKERGLTKDLGCSSVEVE 457
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
++P + +NS+I + L+ M + ++P+N T + S S D
Sbjct: 68 LIPKPHVFIFNSLIRAFSHSHIPNTPLSLYSHMHKNSILPNNFTFPFLFKSLSDSHDFVQ 127
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ + ++ + + NSL+++YA G L+ +F MPQ++VVSW V+I
Sbjct: 128 SQCVYTHVIKLGYVNDIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRN 187
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G +A+ +FE+M+ G+ P+ +T LSAC+ S +EMG + ++ G DV
Sbjct: 188 GGKYNDALLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMGVWIDDMVRRN-GWELDVI 246
Query: 181 HYACMVDLLGRGGFLGEAMSLI 202
++D+ + G + E + +
Sbjct: 247 LGTALIDMYVKCGRVEEGLKVF 268
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 182/323 (56%), Gaps = 1/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ ++W + S + G E+M +F M SG PD LV IL++ S +G L
Sbjct: 279 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA 338
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H ++ N + + SL+ +YAKC +++ A +F GM K+VV+W+ II A H
Sbjct: 339 VCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 398
Query: 122 GSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G+EA++ F +M S P+ +TF +LSACSHSGL++ G F +M + + + P+
Sbjct: 399 GQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 458
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYA MVDLLGR G L A+ LI +PM+ +WGALLGAC+ N++MG+ K L L
Sbjct: 459 HYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 518
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+G Y+LLSN+Y + W K+R+++ + + K S +E+ F+ D+
Sbjct: 519 DANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGDRI 578
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H+ S IY ++ +L ++ V +
Sbjct: 579 HDESDHIYEILTKLHAKMREVAF 601
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 124/242 (51%), Gaps = 5/242 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ +SW+++ +C+ G + ++LF M + P+ T+VS+L +C+ + +L G
Sbjct: 178 MSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEG 237
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H+ + + T+ +LM+MY KC + + A+D F MP+K+V++W V+ A +
Sbjct: 238 MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADN 297
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E++ +F M +SG PD I +L+ S G+++ + + G +
Sbjct: 298 GMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKN-GFENNQFI 356
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
A ++++ + + +A + + + K D V W +++ A +G G++ LK ++
Sbjct: 357 GASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAA---YGFHGQGEEALKFFYQMA 412
Query: 242 RY 243
+
Sbjct: 413 NH 414
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 4/257 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALG 61
P + V W SI+S + Q G A+ F RM VS V PD TLVS+ S+C+ + + LG
Sbjct: 77 PKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLG 136
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H ++ + + L NSL+++Y K G+++ A ++F M K+++SW+ + A +
Sbjct: 137 RSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADN 196
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ + +++F +M + P+ +T +L AC+ +E G L + +G +
Sbjct: 197 GAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHEL-AVNYGFEMETTV 255
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D+ + +A+ ++P K D + W L G + + + +L G
Sbjct: 256 STALMDMYMKCFSPEKAVDFFNRMP-KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG 314
Query: 242 -RYDSGLYVLLSNMYSE 257
R D+ V + SE
Sbjct: 315 TRPDAIALVKILTTVSE 331
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 4/183 (2%)
Query: 40 PDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDI 99
PDN ++ L SC+ + L LGK H ++ I + + ++L+++Y KCG + A+++
Sbjct: 13 PDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEV 72
Query: 100 FFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGL 158
F P+ +VV W I+ GS + A+ F +M S + PD +T + SAC+
Sbjct: 73 FMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSN 132
Query: 159 VEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
++GR G + G+ + ++ L G+ G + A +L +++ K D + W +
Sbjct: 133 FKLGRSVHGFVKRK-GLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDK-DIISWSTMF 190
Query: 219 GAC 221
AC
Sbjct: 191 -AC 192
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 182/323 (56%), Gaps = 1/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ ++W + S + G E+M +F M SG PD LV IL++ S +G L
Sbjct: 371 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA 430
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H ++ N + + SL+ +YAKC +++ A +F GM K+VV+W+ II A H
Sbjct: 431 VCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 490
Query: 122 GSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G+EA++ F +M S P+ +TF +LSACSHSGL++ G F +M + + + P+
Sbjct: 491 GQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYA MVDLLGR G L A+ LI +PM+ +WGALLGAC+ N++MG+ K L L
Sbjct: 551 HYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 610
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+G Y+LLSN+Y + W K+R+++ + + K S +E+ F+ D+
Sbjct: 611 DANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGDRI 670
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H+ S IY ++ +L ++ V +
Sbjct: 671 HDESDHIYEILTKLHAKMREVAF 693
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 124/242 (51%), Gaps = 5/242 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ +SW+++ +C+ G + ++LF M + P+ T+VS+L +C+ + +L G
Sbjct: 270 MSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEG 329
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H+ + + T+ +LM+MY KC + + A+D F MP+K+V++W V+ A +
Sbjct: 330 MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADN 389
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E++ +F M +SG PD I +L+ S G+++ + + G +
Sbjct: 390 GMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKN-GFENNQFI 448
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
A ++++ + + +A + + + K D V W +++ A +G G++ LK ++
Sbjct: 449 GASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAA---YGFHGQGEEALKFFYQMA 504
Query: 242 RY 243
+
Sbjct: 505 NH 506
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 4/257 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALG 61
P + V W SI+S + Q G A+ F RM VS V PD TLVS+ S+C+ + + LG
Sbjct: 169 PKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLG 228
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H ++ + + L NSL+++Y K G+++ A ++F M K+++SW+ + A +
Sbjct: 229 RSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADN 288
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ + +++F +M + P+ +T +L AC+ +E G L + +G +
Sbjct: 289 GAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHEL-AVNYGFEMETTV 347
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D+ + +A+ ++P K D + W L G + + + +L G
Sbjct: 348 STALMDMYMKCFSPEKAVDFFNRMP-KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG 406
Query: 242 -RYDSGLYVLLSNMYSE 257
R D+ V + SE
Sbjct: 407 TRPDAIALVKILTTVSE 423
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 110/223 (49%), Gaps = 8/223 (3%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRM---CVSGV--MPDNATLVSILSSCSHMGD 57
P K WN+++ + EG+ E + LFC+M C + PDN ++ L SC+ +
Sbjct: 63 PHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRK 122
Query: 58 LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
L LGK H ++ I + + ++L+++Y KCG + A+++F P+ +VV W I+
Sbjct: 123 LLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSG 182
Query: 118 LALHGSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
GS + A+ F +M S + PD +T + SAC+ ++GR G + G+
Sbjct: 183 YEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRK-GLD 241
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
+ ++ L G+ G + A +L +++ K D + W +
Sbjct: 242 NKLCLANSLLHLYGKTGSIKNASNLFREMSDK-DIISWSTMFA 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 86 MYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMR-----ASGLF 140
+YA+ ++ A +F P K V WN ++ + G E + +F +M+ +
Sbjct: 45 LYARYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEK 104
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
PD + + L +C+ + +G+ G + I D+ + ++DL + G + +A+
Sbjct: 105 PDNYSVSIALKSCAGLRKLLLGKMIHGFLKKV-RIDNDMFVGSALIDLYTKCGQMNDAVE 163
Query: 201 LIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ + P KPD V+W +++ + G+ E+ +++
Sbjct: 164 VFMEYP-KPDVVLWTSIVSGYEQSGSPELALAFFSRMV 200
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 182/323 (56%), Gaps = 1/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ ++W + S + G E+M +F M SG PD LV IL++ S +G L
Sbjct: 371 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA 430
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H ++ N + + SL+ +YAKC +++ A +F GM K+VV+W+ II A H
Sbjct: 431 VCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 490
Query: 122 GSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G+EA++ F +M S P+ +TF +LSACSHSGL++ G F +M + + + P+
Sbjct: 491 GQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYA MVDLLGR G L A+ LI +PM+ +WGALLGAC+ N++MG+ K L L
Sbjct: 551 HYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 610
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+G Y+LLSN+Y + W K+R+++ + + K S +E+ F+ D+
Sbjct: 611 DANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGDRI 670
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H+ S IY ++ +L ++ V +
Sbjct: 671 HDESDHIYEILTKLHAKMREVAF 693
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 124/242 (51%), Gaps = 5/242 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ +SW+++ +C+ G + ++LF M + P+ T+VS+L +C+ + +L G
Sbjct: 270 MSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEG 329
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H+ + + T+ +LM+MY KC + + A+D F MP+K+V++W V+ A +
Sbjct: 330 MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADN 389
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E++ +F M +SG PD I +L+ S G+++ + + G +
Sbjct: 390 GMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKN-GFENNQFI 448
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
A ++++ + + +A + + + K D V W +++ A +G G++ LK ++
Sbjct: 449 GASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAA---YGFHGQGEEALKFFYQMA 504
Query: 242 RY 243
+
Sbjct: 505 NH 506
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 4/257 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALG 61
P + V W SI+S + Q G A+ F RM VS V PD TLVS+ S+C+ + + LG
Sbjct: 169 PKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLG 228
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H ++ + + L NSL+++Y K G+++ A ++F M K+++SW+ + A +
Sbjct: 229 RSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADN 288
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ + +++F +M + P+ +T +L AC+ +E G L + +G +
Sbjct: 289 GAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHEL-AVNYGFEMETTV 347
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D+ + +A+ ++P K D + W L G + + + +L G
Sbjct: 348 STALMDMYMKCFSPEKAVDFFNRMP-KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG 406
Query: 242 -RYDSGLYVLLSNMYSE 257
R D+ V + SE
Sbjct: 407 TRPDAIALVKILTTVSE 423
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 110/223 (49%), Gaps = 8/223 (3%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRM---CVSGV--MPDNATLVSILSSCSHMGD 57
P K WN+++ + EG+ E + LFC+M C + PDN ++ L SC+ +
Sbjct: 63 PHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRK 122
Query: 58 LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
L LGK H ++ I + + ++L+++Y KCG + A+++F P+ +VV W I+
Sbjct: 123 LLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSG 182
Query: 118 LALHGSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
GS + A+ F +M S + PD +T + SAC+ ++GR G + G+
Sbjct: 183 YEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRK-GLD 241
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
+ ++ L G+ G + A +L +++ K D + W +
Sbjct: 242 NKLCLANSLLHLYGKTGSIKNASNLFREMSDK-DIISWSTMFA 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 86 MYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMR-----ASGLF 140
+YA+ ++ A +F P K V WN ++ + G E + +F +M+ +
Sbjct: 45 LYARYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEK 104
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
PD + + L +C+ + +G+ G + I D+ + ++DL + G + +A+
Sbjct: 105 PDNYSVSIALKSCAGLRKLLLGKMIHGFLKKV-RIDNDMFVGSALIDLYTKCGQMNDAVE 163
Query: 201 LIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ + P KPD V+W +++ + G+ E+ +++
Sbjct: 164 VFMEYP-KPDVVLWTSIVSGYEQSGSPELALAFFSRMV 200
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 169/272 (62%), Gaps = 2/272 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V++ SW+++IS + Q A+ELF +M G+ P+ T+VS+ S+ + +G L G
Sbjct: 409 MHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEG 468
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK--NVVSWNVIIGALA 119
K AH+Y+ +I + L +L++MYAKCG++ +A+ F + + +V WN II LA
Sbjct: 469 KLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLA 528
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG +E+F M+ + P+ ITF G+LSAC H+GLVE G+ F M S + + PD+
Sbjct: 529 SHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDI 588
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY CM+D+LGR G L EA +I+ +PM+ D V+WG LL AC+T GN+ +G++ + L
Sbjct: 589 KHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLAR 648
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIM 271
L G VLLSN+Y+ + +W+++ +R +M
Sbjct: 649 LAPSHGGGKVLLSNIYANAGKWEEVSFVRSVM 680
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 31/184 (16%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP K VS+ ++I VQ G EA+E+F M GV+P++ TLV+++S+CSH+G++
Sbjct: 144 VMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLN 203
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA- 119
+ H + + V + +LM+ Y C ++ A +F MP++N+V+WNV++ A
Sbjct: 204 CRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAK 263
Query: 120 ------------------------------LHGSGKEAIEMFEKMRASGLFPDEITFTGL 149
G +EA+E++ M +G P+E+ L
Sbjct: 264 TGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNL 323
Query: 150 LSAC 153
+SAC
Sbjct: 324 VSAC 327
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 43/226 (19%)
Query: 45 LVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG-- 102
LVS L SCS + ++ G++ H I + + + NSL+NMYAKCG ++ A +F G
Sbjct: 56 LVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFA 115
Query: 103 -----------------------------MPQKNVVSWNVIIGALALHGSGKEAIEMFEK 133
MP K VS+ +I +G +EA+E+F+
Sbjct: 116 TLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKD 175
Query: 134 MRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG-----ISPDVAHYACMVDL 188
MR+ G+ P+++T ++SACSH G V R GL+ F +S ++ H C+
Sbjct: 176 MRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCS- 234
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
+ EA L ++P + + V W +L G ++ +++
Sbjct: 235 -----GVREARRLFDEMPER-NLVTWNVMLNGYAKTGLVDEARELF 274
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 124/300 (41%), Gaps = 68/300 (22%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ +SW ++I ++Q+G+ EA+E++ M +G P+ +V+++S+C + G +
Sbjct: 280 KDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQL 339
Query: 65 HDYI------CDNNITVSVTLC-------------------------NSLMNMYAKCGAL 93
H + C N I ++ N+L + K G +
Sbjct: 340 HGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMM 399
Query: 94 QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
A+ F M ++V SW+ +I A K A+E+F KM A G+ P+E+T + SA
Sbjct: 400 DHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAI 459
Query: 154 SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSL------------ 201
+ G ++ G+ M S I + A ++D+ + G + A+
Sbjct: 460 ATLGTLQEGKLAHEYMRSE-SIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVS 518
Query: 202 ------------------------IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+Q+ +KP+ + + +L AC G +E GK+I K +
Sbjct: 519 PWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTM 578
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 116/322 (36%), Positives = 180/322 (55%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K V WN+II+ + G EA+ ++ +M SG D+ T+ +++ C+ + L G
Sbjct: 285 MPQKTTVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHG 344
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + + ++L+N Y+K G ++ A +F M +KN++SWN +I H
Sbjct: 345 KQGHAALVRRGFGTDLVANSALVNFYSKWGRMENARHVFDKMHRKNIISWNALIAGYGHH 404
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+EAIEMFEKM + P+ +TF +LSACS+SGL E G F MS I P H
Sbjct: 405 GRGEEAIEMFEKMLQENMTPNHVTFLAVLSACSYSGLSERGWEIFQSMSQDHNIKPRAMH 464
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YACM++LLGR G L EA++LI+ P P +W ALL AC+ NLE+GK ++L +
Sbjct: 465 YACMIELLGREGLLDEAVALIRNAPFPPTLNMWAALLIACRMHKNLELGKFAAEKLYGME 524
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
YV+L N+Y+ S + + + + + G++ A + IE++ + F+ DK+H
Sbjct: 525 PEKLCNYVMLLNIYNSSGKLKEAADVLQTLKRKGLRMLPAYTWIEVNKQPHAFLCGDKSH 584
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+ + IY VD LM + GY
Sbjct: 585 KQTKKIYKKVDSLMVEISRHGY 606
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 119/239 (49%), Gaps = 4/239 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +++ SW ++I V ++EA ELF M + T +++ + + + + +G
Sbjct: 184 MPERDSSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGKSRTFAAMVRASARLDCIEVG 243
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H I + + +L++MY+KCG ++ A +F MPQK V WN II A
Sbjct: 244 RQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQKTTVGWNTIIAGYAFR 303
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY-YFGLMSSTFGISPDVA 180
G +EA+ ++ KMR SG D T + +++ C+ +E G+ + L+ FG D+
Sbjct: 304 GFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHGKQGHAALVRRGFGT--DLV 361
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ +V+ + G + A + K+ K + + W AL+ G E ++ +++L+
Sbjct: 362 ANSALVNFYSKWGRMENARHVFDKMHRK-NIISWNALIAGYGHHGRGEEAIEMFEKMLQ 419
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 95/210 (45%), Gaps = 6/210 (2%)
Query: 25 EAMELFCRMCVSGVMP--DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNS 82
EAMELF + + +T +++S+C + + K+ +Y+ ++ + + + N
Sbjct: 104 EAMELFEMLELENAESYVGASTYDALISACIRLRSIIGVKRVFNYMKNSGFELDLYMMNR 163
Query: 83 LMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPD 142
++ M+ +C ++ A F MP+++ SW +IG L + EA E+F M
Sbjct: 164 VLFMHVQCNLMRDARTWFDDMPERDSSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGK 223
Query: 143 EITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLI 202
TF ++ A + +E+GR + ++ D ++D+ + G + +A +
Sbjct: 224 SRTFAAMVRASARLDCIEVGRQIHTCILKR-AVNGDPFVDCALIDMYSKCGNIEDARCVF 282
Query: 203 QKLPMKPDAVVWGALLG--ACKTFGNLEMG 230
++P K V W ++ A + F +G
Sbjct: 283 DQMPQKT-TVGWNTIIAGYAFRGFSEEALG 311
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 224 bits (572), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 183/321 (57%), Gaps = 3/321 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN VSW S+++ VQ + A +F + V P + + S+LS+C+ +G L LG+
Sbjct: 274 KNVVSWCSMLAALVQNHEEERACMVFLQ-ARKEVEPTDFMISSVLSACAELGGLELGRSV 332
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + ++ + ++L++MY KCG+++ A +F +P++N+V+WN +IG A G
Sbjct: 333 HALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDI 392
Query: 125 KEAIEMFEKMR--ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
A+ +FE+M + G+ P +T +LS CS G VE G F M +GI P H+
Sbjct: 393 DMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHF 452
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
AC+VDLLGR G + A IQ + ++P VWGALLGAC+ G E+GK ++L EL
Sbjct: 453 ACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDH 512
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHE 302
DSG +V+LSNM + + RW++ +RK M D GIKK S I + + F D +H+
Sbjct: 513 VDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHD 572
Query: 303 VSTSIYSMVDQLMDHLKSVGY 323
++ I +M+ +L +K GY
Sbjct: 573 RNSEIQAMLGKLRGGMKEAGY 593
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 127/238 (53%), Gaps = 6/238 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCR-MCVSGVMPDNATLVSILSSCSHMGDLAL 60
MP +N +WN+ IS VQ+ + +A+ F +CV G P++ T + L++C M L L
Sbjct: 169 MPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHG-EPNSITFCAFLNACVDMVRLNL 227
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM-PQKNVVSWNVIIGALA 119
G++ H +I V++ N L++ Y KCG + +A +F + +KNVVSW ++ AL
Sbjct: 228 GRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALV 287
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+ + A +F + R + P + + +LSAC+ G +E+GR L + ++
Sbjct: 288 QNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALAVKA-CVEDNI 345
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ +VD+ G+ G + A + +LP + + V W A++G G+++M ++ +++
Sbjct: 346 FVGSALVDMYGKCGSIENAEQVFSELPER-NLVTWNAMIGGYAHQGDIDMALRLFEEM 402
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 1/217 (0%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
++ V+W S+IS V + A+ F M V P++ T + + + + GK+
Sbjct: 70 LRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQ 129
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + V + S +MY K G A ++F MPQ+N+ +WN I
Sbjct: 130 IHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRR 189
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+AI F++ P+ ITF L+AC + +GR + G DV+
Sbjct: 190 SLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRC-GYKEDVSVAN 248
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
++D G+ G + A + ++ + + V W ++L A
Sbjct: 249 GLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAA 285
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 4/182 (2%)
Query: 38 VMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNIT-VSVTLCNSLMNMYAKCGALQTA 96
+ P N L S+L S LG+ H +I ++T + L N L+NMY+K L +A
Sbjct: 3 IHPQN-LLGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSA 61
Query: 97 MDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS 156
+ + VV+W +I + A+ F MR + P++ TF + A +
Sbjct: 62 QHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFV 121
Query: 157 GLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGA 216
+ G+ GL + G+ DV D+ + GF G+A ++ ++P + + W A
Sbjct: 122 QIPMTGKQIHGL-ALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQR-NLATWNA 179
Query: 217 LL 218
+
Sbjct: 180 YI 181
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 224 bits (572), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 169/285 (59%), Gaps = 1/285 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ VSWNS+IS + Q G EA++LF RM + +PD T+V +LS+C+ +G +G
Sbjct: 405 KDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSL 464
Query: 65 HDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + ++ S+ + +L+N YAKCG +A +F GM +KN V+W +IG + G
Sbjct: 465 HGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGD 524
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
G ++ +F M L P+E+ FT LL+ACSHSG+VE G F M P + HYA
Sbjct: 525 GVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYA 584
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
CMVDLL R G L EA+ I K+P++P V+GA L C N + G+ ++++LEL
Sbjct: 585 CMVDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPD 644
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEID 288
+ YVL+SN+Y+ RW +K++R+++ G+ K +S +E+D
Sbjct: 645 QACYYVLISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVEMD 689
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 121/235 (51%), Gaps = 6/235 (2%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V W ++I + Q G A+ELF ++P++ TL S+LS+C+ + ++ +GK H
Sbjct: 308 VFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVL 367
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + +L NSL++MYAKCG + A +F K+VVSWN +I A GS EA
Sbjct: 368 VVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEA 426
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+++F +MR PD +T G+LSAC+ G ++G G +S + +++
Sbjct: 427 LDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLN 486
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC----KTFGNLEMGKQILKQLL 238
+ G A + + K +AV W A++G C G+L + + +LK+ L
Sbjct: 487 FYAKCGDATSARMVFDGMGEK-NAVTWAAMIGGCGMQGDGVGSLALFRDMLKEEL 540
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 152/334 (45%), Gaps = 48/334 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNA-TLVSILSSCSHMGDLAL 60
+P ++ VSW S+I +VQ E + LF RM G + N T+ S++++C+ +G L
Sbjct: 195 IPDRSVVSWTSMIVAYVQNECAEEGLMLFNRM-REGFLDGNVFTVGSLVTACTKLGCLHQ 253
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF--FGMPQ----KNVVSWNVI 114
GK H Y+ N I ++ L SL+NMY KCG + A +F F + ++V W +
Sbjct: 254 GKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAM 313
Query: 115 IGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY------FGL 168
I G + A+E+F + + P+ +T LLSAC+ + MG+ +GL
Sbjct: 314 IVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGL 373
Query: 169 -----------MSSTFGISPDVAHY--ACMVDL-----------LGRGGFLGEAMSLIQK 204
M + G+ PD AHY A VD + G EA+ L +
Sbjct: 374 DDTSLRNSLVDMYAKCGLIPD-AHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNR 432
Query: 205 LPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQ 259
+ M+ PDAV +L AC + G ++G + L+ G S +YV L N Y++
Sbjct: 433 MRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKC- 491
Query: 260 RWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQ 293
D R + + G K +++ I GC Q
Sbjct: 492 --GDATSARMVFDGMGEKNAVTWAAM-IGGCGMQ 522
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 121/296 (40%), Gaps = 41/296 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELF-CRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+P S+ II H H+ + + G D +L + S + D+ L
Sbjct: 94 LPSPTHHSFKLIIRWHFLNDVHSHVVSFYNLARTTLGSFNDLVVFSILLKTASQLRDIVL 153
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K H I +N S L SL++ Y+KCG L+ A +F +P ++VVSW +I A
Sbjct: 154 TTKLHCNILKSNAADSFVL-TSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQ 212
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM----------- 169
+ +E + +F +MR L + T L++AC+ G + G++ G +
Sbjct: 213 NECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYL 272
Query: 170 -------------------------SSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
ST G D+ + M+ + G+ A+ L
Sbjct: 273 ATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTD 332
Query: 205 ---LPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSE 257
+ P++V +LL AC N+ MGK + +++ G D+ L L +MY++
Sbjct: 333 KKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLDDTSLRNSLVDMYAK 388
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 177/283 (62%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+++ V W+SII + + G+ +A++LF +M P+ TL++++S+C+++ G
Sbjct: 337 LRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGV 396
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H YI I S+ +CN+L+NMYAKCG+L + IF MP ++ V+WN +I A LHG
Sbjct: 397 IHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGY 456
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
G++A++ F +M+ G+ D +TF +LSAC+H+GLV G+ F +++ I + HYA
Sbjct: 457 GEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITIEHYA 516
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
C++DL GR G L +A+ +++ +PMKP A +W +L+ +CK G L++ + + QL+
Sbjct: 517 CLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQLIRSEPN 576
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
++ Y LLS +++E RW D++++R+ M ++KC S IE
Sbjct: 577 NAASYTLLSMIHAEKGRWLDIEQVRETMKLQRLRKCYGFSRIE 619
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 42/307 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLA-- 59
MP ++ ++WNS+I+ ++Q G EA+++ G +P L S++S C DL
Sbjct: 127 MPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWR 186
Query: 60 LGKKAHDYIC-DNNITV--SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
+G++ H + D I + SV L + ++ Y +CG A +F M KN VSW +I
Sbjct: 187 IGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVIS 246
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL-----MSS 171
A + A+ + +M+ G+ P+ +T LL+AC+ G V+ G+ G S
Sbjct: 247 GCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDS 306
Query: 172 TFGISP--------------------------DVAHYACMVDLLGRGGFLGEAMSLIQKL 205
SP DV ++ ++ R G +A+ L K+
Sbjct: 307 CHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKM 366
Query: 206 ---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQR 260
+P+ V A++ AC + + G I +L+ G ++V L NMY++
Sbjct: 367 RTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFG-IGFSIFVCNALINMYAKCGS 425
Query: 261 WDDMKKI 267
DD +KI
Sbjct: 426 LDDSRKI 432
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +++V+WNS+IS + G +A++ F M GV D T +++LS+C+H G + G
Sbjct: 436 MPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEG 495
Query: 62 KKAHDYI---CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS-WNVIIGA 117
++ + + C+ IT+ C L++++ + G L+ A++I MP K W+ ++ +
Sbjct: 496 QQLFEQVNADCEIPITIEHYAC--LIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSS 553
Query: 118 LALHG 122
LHG
Sbjct: 554 CKLHG 558
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 13/213 (6%)
Query: 18 VQEGQHAEAMELFCRMCVSGVMPDNATLV--SILSSCSHMGDLALGKKAHDYICDNNITV 75
V G + + ++ F ++ S ++ V S++ +CS A G + H C IT
Sbjct: 40 VSMGLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLH---CLAFITG 96
Query: 76 SVT---LCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFE 132
S T + NS+++MYAK +++A +F MP ++ ++WN +I A +G EA++M +
Sbjct: 97 SYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLK 156
Query: 133 KMRASGLFPDEITFTGLLSACSHSGLV--EMGRYYFGL--MSSTFGISPDVAHYACMVDL 188
G P ++S C + +GR GL + I V VD
Sbjct: 157 DFYFLGFLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDF 216
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
R G A S+ ++ +K + V W A++ C
Sbjct: 217 YFRCGDSLMARSVFDEMEVK-NEVSWTAVISGC 248
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 188/319 (58%), Gaps = 2/319 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ + W ++I + Q G+ +A+ LF M V PD+ T+ +++SSC+ + L G+
Sbjct: 293 KDEICWTTMIVGYAQSGREEDALMLFSEMLRGNVRPDSHTISTVVSSCAKLASLYHGQAV 352
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + ++ + ++L++MY KCG A IF MP KNV+ WN +I A +G
Sbjct: 353 HGKVILMGVDSNMLVSSALVDMYCKCGVPLDARVIFETMPIKNVIIWNSMILGYAQNGEA 412
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+EA+ ++E+M PD I+F G+LSAC ++ +V+ GR +F +S G++P + HYAC
Sbjct: 413 EEALTLYERMLQENFKPDNISFVGVLSACINTNMVKEGRKHFDSISEQ-GMTPTLDHYAC 471
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
M+ LLGR G + +A+ LI+ +P KPD +W ALL C G+++ + + +L ++
Sbjct: 472 MIILLGRSGNIDKALDLIKGMPHKPDCRIWSALLSVCSK-GDIKTAEVAANHIFQLDPHN 530
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
+G Y++LSN+Y+ RW D+ +R +M KK A S +EI ++F+ DD NH
Sbjct: 531 AGSYIMLSNLYAACGRWKDVAVVRSLMKSKNAKKFSAYSWVEIGKKVHRFVSDDHNHPEM 590
Query: 305 TSIYSMVDQLMDHLKSVGY 323
IYS +++L+ L+ +GY
Sbjct: 591 EKIYSELNRLIGILQQIGY 609
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 131/259 (50%), Gaps = 11/259 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +++VS+N++I+C +A+ F RM G P + V+ L +CS + D LG
Sbjct: 123 MACRDSVSYNTMIACFASNWLSGKALRFFVRMQEDGFRPTQYSYVNALQACSQLLDFRLG 182
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + +V + N++ ++YAKCG + A +F GM KN+VSWN++I
Sbjct: 183 KQIHGRVVVGEFEKNVFVWNAVTDLYAKCGDIDRARWLFDGMVNKNLVSWNLMISGYVKM 242
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E I F KM+ SGL PD++T + +L+A SG V+ R F + D
Sbjct: 243 GKPDECISFFNKMQLSGLKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDKK-----DEIC 297
Query: 182 YACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ M+ + G +A+ L ++ ++PD+ ++ +C +L G+ + +++
Sbjct: 298 WTTMIVGYAQSGREEDALMLFSEMLRGNVRPDSHTISTVVSSCAKLASLYHGQAVHGKVI 357
Query: 239 ELGRYDSGLYV--LLSNMY 255
+G DS + V L +MY
Sbjct: 358 LMG-VDSNMLVSSALVDMY 375
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP+KN + WNS+I + Q G+ EA+ L+ RM PDN + V +LS+C + + G
Sbjct: 391 MPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNISFVGVLSACINTNMVKEG 450
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK 106
+K D I + +T ++ ++ + + G + A+D+ GMP K
Sbjct: 451 RKHFDSISEQGMTPTLDHYACMIILLGRSGNIDKALDLIKGMPHK 495
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 13/193 (6%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
N+L++ YAK G ++ +F M ++ VS+N +I A + +A+ F +M+ G
Sbjct: 101 NALLSAYAKVGLVEDLNLVFDRMACRDSVSYNTMIACFASNWLSGKALRFFVRMQEDGFR 160
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
P + ++ L ACS +G+ G + +V + + DL + G + A
Sbjct: 161 PTQYSYVNALQACSQLLDFRLGKQIHGRV-VVGEFEKNVFVWNAVTDLYAKCGDIDRARW 219
Query: 201 LIQKLPMKPDAVVWGALLGACKTFGNLEMGKQ------ILKQLLELGRYDSGLYVLLSNM 254
L + K + V W ++ G ++MGK K L + D + N
Sbjct: 220 LFDGMVNK-NLVSWNLMIS-----GYVKMGKPDECISFFNKMQLSGLKPDQVTVSSVLNA 273
Query: 255 YSESQRWDDMKKI 267
Y +S R DD + +
Sbjct: 274 YFQSGRVDDARNM 286
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 190/319 (59%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN V W ++++ +H EA+E+F M V+P+ ++ S L+SC + DL G+
Sbjct: 291 KNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVI 350
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + +V NSL+ MY+KCG + A+ +F G+ +KNVVSWN +I A HG G
Sbjct: 351 HAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCG 410
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
A+ +F++M G+ DEIT TGLLSACS SG+++ R +FG + + V HYAC
Sbjct: 411 TWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYAC 470
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVD+LGR G + EA +L +P++ +++VW LL AC+ +L++ ++ K++ E+
Sbjct: 471 MVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDC 530
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
S YVLLSN+Y+ S+RW ++ +IR M +GI K S I + G ++F+ D++H ++
Sbjct: 531 SAAYVLLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLT 590
Query: 305 TSIYSMVDQLMDHLKSVGY 323
IY + L L+ +GY
Sbjct: 591 EEIYEKLVWLGVKLRELGY 609
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 113/247 (45%), Gaps = 13/247 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
MP ++ +SW SII + G+ +A+ F M SGV + TLV LS+ + + D
Sbjct: 184 MPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYA 243
Query: 61 GKKAH------DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVI 114
G + H + C + VS SL+ YA C + A +F KNVV W +
Sbjct: 244 GIQIHCCMFKFGFCCGLDEFVSA----SLVTFYASCKRMGDACKVFGETVCKNVVVWTAL 299
Query: 115 IGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
+ L+ EA+E+F +M + P+E +FT L++C +E GR G
Sbjct: 300 LTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHA-AGIKMG 358
Query: 175 ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
+ V +V + + GF+G+A+ + + + K + V W +++ C G +
Sbjct: 359 LENAVYTGNSLVVMYSKCGFIGDALCVFKGICEK-NVVSWNSVIVGCAQHGCGTWALVLF 417
Query: 235 KQLLELG 241
K++L G
Sbjct: 418 KEMLREG 424
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 17/224 (7%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
K+ +SWNS+I + A++LF M + + LS+ + +
Sbjct: 91 TKDTISWNSVIKASIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLST-GRVNEAERFFN 149
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
A Y+ + V N+++N Y G + A+ +F MP ++V+SW II L +G
Sbjct: 150 AMPYVDKD-----VATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGK 204
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS----TFGISPDV 179
+A+ F+ M G I+ T L+ C S ++ +Y G+ FG +
Sbjct: 205 SYQALFFFKNM--VGFSGVGISSTTLV--CGLSAAAKILDFYAGIQIHCCMFKFGFCCGL 260
Query: 180 AHY--ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
+ A +V +G+A + + K + VVW ALL C
Sbjct: 261 DEFVSASLVTFYASCKRMGDACKVFGETVCK-NVVVWTALLTGC 303
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/322 (36%), Positives = 181/322 (56%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P +N V+WN+II +VQ G AM LF M + P T S+L + + + L G
Sbjct: 399 LPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPG 458
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + NSL++MYAKCG + A F M +++ VSWN +I ++H
Sbjct: 459 LQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMH 518
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EA+ +F+ M+ + P+++TF G+LSACS++GL+ G+ +F MS + I P + H
Sbjct: 519 GMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEH 578
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMV LLGR G EAM LI ++ +P +VW ALLGAC +++G+ + +LE+
Sbjct: 579 YTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEME 638
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+D +VLLSNMY+ + RWD++ +RK M ++K +S +E G + F V D +H
Sbjct: 639 PHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSH 698
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
I +M++ L + GY
Sbjct: 699 PDIKLICAMLEWLNKKTRDAGY 720
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 115/217 (52%), Gaps = 2/217 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP + + W+ +I+ + Q + EA++LF RM + V+P+N T S+L +C+ L LG
Sbjct: 298 MPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLG 357
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + + +V + N++M++YAKCG ++ +M +F +P +N V+WN II
Sbjct: 358 KQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQL 417
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+ A+ +F M + P E+T++ +L A + +E G L T + D
Sbjct: 418 GDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTM-YNKDTVV 476
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
++D+ + G + +A K+ K D V W A++
Sbjct: 477 ANSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMI 512
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 126/239 (52%), Gaps = 10/239 (4%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ VSW +++C+ + + E+++LF +M + G P+N T+ L SC + +GK
Sbjct: 200 KDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSV 259
Query: 65 HDYIC----DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
H D+++ V + +L+ +YAK G + A +F MP+ +++ W+++I A
Sbjct: 260 HGCALKGCYDHDLFVGI----ALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQ 315
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
KEA+++F +MR + + P+ TF +L AC+ S +++G+ + FG++ +V
Sbjct: 316 SDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLK-FGLNSNVF 374
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D+ + G + +M L ++LP + D V W ++ G+ E + +LE
Sbjct: 375 VSNAIMDVYAKCGEIENSMKLFEELPDRND-VTWNTIIVGYVQLGDGERAMNLFTHMLE 432
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 104/245 (42%), Gaps = 17/245 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP N +S+ ++ + ++ Q +A+ R+ G + ++L M L
Sbjct: 96 MPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLC 155
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H + + +L++ Y+ G + A +F + K++VSW ++ A +
Sbjct: 156 WTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAEN 215
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS----- 176
+E++++F +MR G P+ T +G L +C +G F + S G +
Sbjct: 216 CFYEESLQLFNQMRIMGYKPNNFTISGALKSC-------LGLEAFNVGKSVHGCALKGCY 268
Query: 177 -PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
D+ +++L + G + +A L +++P K D + W ++ + + K+ L
Sbjct: 269 DHDLFVGIALLELYAKSGEIIDAQRLFEEMP-KTDLIPWSLMIA---RYAQSDRSKEALD 324
Query: 236 QLLEL 240
L +
Sbjct: 325 LFLRM 329
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 179/318 (56%), Gaps = 2/318 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN +SW SII + +A+ F M + P+ TLV +LS+C+ +G GK+
Sbjct: 466 KNIISWTSIILGLRINNRCYDALFFFKEM-MRRQKPNWVTLVCVLSACARIGAFTCGKEI 524
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H Y ++ + N++++MY +CG ++ A FF + Q +V +WN+++ A G G
Sbjct: 525 HAYALRTGVSDDGYMPNAVLDMYVRCGRMEYAWKQFFSIDQ-DVSTWNILLTGYAERGKG 583
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
A E+F +M S + P+E+TF +L ACS SG+V G Y+ M + I P++ HYAC
Sbjct: 584 TLATELFRRMLESNVVPNEVTFISILCACSRSGMVAEGLEYYDSMKYKYSIKPNLKHYAC 643
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VDLLGR G L +A IQK+PMKPD VWGALL AC+ +E+G+ K +
Sbjct: 644 VVDLLGRAGKLEDAYEFIQKIPMKPDPAVWGALLNACRIHRRVELGELAAKNIFHDDTTS 703
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
G Y+LLSN+Y+++ WD + ++RK+M +GI S +E G + F+ D H
Sbjct: 704 VGYYILLSNLYADNNIWDKVAEVRKMMRQNGIIVDPGCSWVENKGTVHAFLSGDNFHPQI 763
Query: 305 TSIYSMVDQLMDHLKSVG 322
I +++++ + +K G
Sbjct: 764 KEINALLERFYEKMKEAG 781
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 4/218 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N SWN ++ + + G EA+ L+ RM GV PD T +L +C + DL G
Sbjct: 160 MPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRPDVYTFPCVLRTCGGVPDLVKG 219
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H ++ V + N+L+ MYAKCG + TA +F MP+K+ +SWN +I +
Sbjct: 220 REIHVHVLRFGFESDVDVINALITMYAKCGDIDTARLVFDKMPKKDRISWNAMIAGCFEN 279
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDVA 180
G E + +F +M + PD +T T +++AC G +GR G +M + F P V
Sbjct: 280 GECLEGLTLFCRMIEYPVDPDLMTMTSVITACELIGDERLGREIHGYVMRTKFSRDPSV- 338
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
Y ++ + G + EA + + + D V+W A++
Sbjct: 339 -YNSLIQMYSSVGLVEEAEKVFSQTECR-DVVMWTAMI 374
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 89/153 (58%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ +SWN++I+ + G+ E + LFCRM V PD T+ S++++C +GD LG
Sbjct: 261 MPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITACELIGDERLG 320
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H Y+ + ++ NSL+ MY+ G ++ A +F ++VV W +I +
Sbjct: 321 REIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYENN 380
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
++A+E ++ M A G+ PDEIT +LSACS
Sbjct: 381 LMHQKALETYKMMEAEGIIPDEITIGVVLSACS 413
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 113/235 (48%), Gaps = 4/235 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V W ++IS + H +A+E + M G++PD T+ +LS+CS + DL G
Sbjct: 365 RDVVMWTAMISGYENNLMHQKALETYKMMEAEGIIPDEITIGVVLSACSCLCDLDTGMNL 424
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H+ + V + N L++MYAKC + A+++F + KN++SW II L ++
Sbjct: 425 HEKAKKTGLIFYVIVANKLIDMYAKCKCIDKALEVFHSIRDKNIISWTSIILGLRINNRC 484
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+A+ F++M P+ +T +LSAC+ G G+ T G+S D
Sbjct: 485 YDALFFFKEMMRRQK-PNWVTLVCVLSACARIGAFTCGKEIHAYALRT-GVSDDGYMPNA 542
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D+ R G + A Q + D W LL G + ++ +++LE
Sbjct: 543 VLDMYVRCGRMEYAWK--QFFSIDQDVSTWNILLTGYAERGKGTLATELFRRMLE 595
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 4/201 (1%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYICDNNIT--VSVTLCNSLMNMYAKCGALQTAMD 98
+ + ++++ C G + YI + + +SV L N L++M+ K G L A
Sbjct: 96 EEDSYIALVRLCEWKRARKEGSRVWSYITKSKMMTHLSVKLGNVLLSMFVKFGNLVDAWY 155
Query: 99 IFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGL 158
+F MP++N+ SWNV++G A G EA+ ++++M G+ PD TF +L C
Sbjct: 156 VFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRPDVYTFPCVLRTCGGVPD 215
Query: 159 VEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ GR + FG DV ++ + + G + A + K+P K D + W A++
Sbjct: 216 LVKGR-EIHVHVLRFGFESDVDVINALITMYAKCGDIDTARLVFDKMP-KKDRISWNAMI 273
Query: 219 GACKTFGNLEMGKQILKQLLE 239
C G G + +++E
Sbjct: 274 AGCFENGECLEGLTLFCRMIE 294
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 180/322 (55%), Gaps = 1/322 (0%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV-MPDNATLVSILSSCSHMGDLALG 61
P KN +W ++IS VQ G +A+ LF M GV + D L S++ +C++ LG
Sbjct: 204 PFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELG 263
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + + + N+L++MYAKC + A IF M +K+VVSW II A H
Sbjct: 264 KQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQH 323
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA+ +++ M +G+ P+E+TF GL+ ACSH GLV GR F M FGI P + H
Sbjct: 324 GLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQH 383
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C++DL R G L EA +LI+ +P+KPD W ALL ACK GN +M +I LL+L
Sbjct: 384 YTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLK 443
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
D Y+LLSN+Y+ + W+++ +RK+M +KK S +++ F + +
Sbjct: 444 PEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQ 503
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+ I ++ +L ++ GY
Sbjct: 504 PMKDEILGLMTKLDSEMRRRGY 525
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 148/344 (43%), Gaps = 79/344 (22%)
Query: 2 MPVKNAVSWNSIIS-CHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD--L 58
+P ++ V+W +++S C++ H +A + + G+ PD+ S++ +C+++G +
Sbjct: 69 LPQQDHVAWATVLSACNLSNLPH-KAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHV 127
Query: 59 ALGKKAH----------------------------DY---ICDNNITVSVTLCNSLMNMY 87
LGK+ H DY + D+ +S ++++ Y
Sbjct: 128 KLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGY 187
Query: 88 AKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGL-FPDEITF 146
A+ G A+++F P KN+ +W +I L G+ +A+ +F +MR G+ D +
Sbjct: 188 ARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVL 247
Query: 147 TGLLSACSHSGLVEMGRYY------FGLMSSTFGISPDVAHYACMVDLL----------- 189
+ ++ AC++S + E+G+ G S F + V YA D++
Sbjct: 248 SSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRR 307
Query: 190 -------------GRGGFLGEAMSLIQKLPM---KPDAVVWGALLGACKTFGNLEMGKQI 233
+ G EA++L + + KP+ V + L+ AC G + G+ +
Sbjct: 308 KDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRAL 367
Query: 234 LKQLLELGRYDSGL------YVLLSNMYSESQRWDDMKKIRKIM 271
K ++E D G+ Y L +++S S D+ + + + M
Sbjct: 368 FKSMVE----DFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTM 407
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 103/269 (38%), Gaps = 74/269 (27%)
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
+ KK H I + + +L++ Y KCG L+ A+ +F +PQ++ V+W ++ A
Sbjct: 26 IAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACN 85
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLV-------------------- 159
L +A + + GL PD F+ L+ AC++ G V
Sbjct: 86 LSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFED 145
Query: 160 --------------EMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKL 205
E+ Y + S F +S + M+ R G EA+ L ++
Sbjct: 146 DVVKSSLVDMYAKFELPDYGRAVFDSIFELSS--ISWTAMISGYARSGRKLEALELFRES 203
Query: 206 PMK-----------------------------------PDAVVWGALLGACKTFGNLEMG 230
P K D +V +++GAC E+G
Sbjct: 204 PFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELG 263
Query: 231 KQILKQLLELGRYDSGLYV--LLSNMYSE 257
KQ+ ++ LG Y+S L++ L +MY++
Sbjct: 264 KQVHCVVITLG-YESCLFISNALVDMYAK 291
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 221 bits (563), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 185/318 (58%), Gaps = 6/318 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P K+ W ++IS +VQ E++ LF M ++ ++PD + VSILS+C+H+G L +G
Sbjct: 200 PEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGV 259
Query: 63 KAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H ++ + +SV L SL++MYAKCG L+ A +F M ++VV WN +I +A+H
Sbjct: 260 WIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAMISGMAMH 319
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G GK A+++F M G+ PD+ITF + +ACS+SG+ G M S + I P H
Sbjct: 320 GDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYNIVPKSEH 379
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPM----KPDAVVWGALLGACKTFGNLEMGKQILKQL 237
Y C+VDLL R G EAM +I+K+ + + W A L AC G ++ + +++
Sbjct: 380 YGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHGETQLAELAAEKV 439
Query: 238 LELGRY-DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMV 296
L+L + SG+YVLLSN+Y+ S + D +++R +M G K SS+EIDG +F+
Sbjct: 440 LQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAPGCSSVEIDGVISEFIA 499
Query: 297 DDKNHEVSTSIYSMVDQL 314
+K H I+S++ ++
Sbjct: 500 GEKTHPQMEEIHSVLKKM 517
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 35/264 (13%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
+N++I + + A+++F +M S + PDN T+ +L +C D + GK H Y
Sbjct: 75 YNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHDCSFGKMIHGYSS 134
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG------- 122
+ + + NSLM MY G + A +F +P NVVSW+V+I A G
Sbjct: 135 KLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARL 194
Query: 123 -----------------SG-------KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGL 158
SG KE++ +F M+ + + PDE F +LSAC+H G
Sbjct: 195 FFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGA 254
Query: 159 VEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+E+G + ++ + V ++D+ + G L A L + M+ D V W A++
Sbjct: 255 LEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMR-DVVCWNAMI 313
Query: 219 GACKTFGNLEMGKQILKQLLELGR 242
G+ GK LK ++ +
Sbjct: 314 SGMAMHGD---GKGALKLFYDMEK 334
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 187/322 (58%), Gaps = 30/322 (9%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPVKN V+W+++I+ +++ +A+E+F + G++ A V +S+C+H+G LA G
Sbjct: 75 MPVKNLVTWSTMINGYLRNNCFDKAVEIFEILIDEGLV---ANEVGAVSACAHLGALAAG 131
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+KA+++ N+ ++V L ++++MYA+CG ++ A+ +F M +K+V+SW +I +A+H
Sbjct: 132 EKAYEHAIRINLDLNVILGTAIVDMYARCGNVEKAVRVFEEMKEKDVISWTSLISGVAMH 191
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA+E F M +G+ P +ITFT +L A SH GLVE G+ F M + + P + H
Sbjct: 192 GYAEEALEYFYVMVKNGIVPRDITFTAVLKAYSHGGLVEKGQEIFESMKRDYRLEPRLEH 251
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDLLGR G L EA + I ++P+KP+A +
Sbjct: 252 YGCMVDLLGRAGKLEEAENFILEMPIKPNA---------------------------PMK 284
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
SG Y LLSN+Y+ + +W D +R++M + G++K S IEIDG ++F + +K H
Sbjct: 285 PEHSGYYALLSNIYARTNKWKDATVMRRLMKEKGVRKQPGYSLIEIDGKTHEFTIGNKRH 344
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
I M ++++ +K GY
Sbjct: 345 PEIDKIERMWEKILQKIKLAGY 366
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 184/318 (57%), Gaps = 1/318 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M + +WN ++ + + +A+ELF ++ G+ PD T++S++ C+ M + L
Sbjct: 552 MSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLL 611
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H YI ++ + L +L++ YAKCG + A IF K++V + +IG A+H
Sbjct: 612 RQCHGYIIRSSFE-DLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMH 670
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++A+E F M G+ PD + FT +LSACSH+G + G F + G+ P +
Sbjct: 671 GMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQ 730
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+AC+VDLL RGG + EA S + K+P++ +A +WG LLGACKT+ +E+G+ + +L ++
Sbjct: 731 FACVVDLLARGGHVSEAYSFVTKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFKIE 790
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
D G Y++LSN+Y+ RWD + ++RK+M + +KK S IE++ F+V D +H
Sbjct: 791 ANDIGNYIVLSNLYAADDRWDGVMEVRKMMRNKDLKKPAGCSWIEVERTNNIFVVGDCSH 850
Query: 302 EVSTSIYSMVDQLMDHLK 319
IYS + L +K
Sbjct: 851 PQRNLIYSTLCTLDQQVK 868
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 9/245 (3%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD---LALG 61
K+ VSWN++I+ + G EA LF M V P+ AT+ +IL C+ + G
Sbjct: 211 KDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCG 270
Query: 62 KKAHDYICD-NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
++ H Y+ ++ V++CN+L++ Y K G + A +F+ M +++VSWN II AL
Sbjct: 271 RQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYAL 330
Query: 121 HGSGKEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+G +++ +F + + L D +T +L AC+ ++ G+ + + D
Sbjct: 331 NGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDT 390
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ +V + G++ EA + K D + W ++L A FG + L L
Sbjct: 391 SAGNALVSFYAKCGYIEEAYHTFSMISRK-DLISWNSILDA---FGEKRHHSRFLSLLHV 446
Query: 240 LGRYD 244
+ + D
Sbjct: 447 MLKLD 451
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 114/238 (47%), Gaps = 17/238 (7%)
Query: 6 NAVSWNSIISCHVQEGQH-AEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLALGKK 63
+ V WN ++S + + G++ A+ M++F M SG VMP + T+ ++L C+ G+L GK
Sbjct: 108 DPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKS 167
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQ-TAMDIFFGMPQKNVVSWNVIIGALALHG 122
H Y+ + + N+L++MYAKCG + A +F + K+VVSWN +I LA +G
Sbjct: 168 VHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENG 227
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACS---HSGLVEMGRYYFGLMSSTFGISPDV 179
KEA +F M + P+ T +L C+ + GR + +S DV
Sbjct: 228 LLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADV 287
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW----------GALLGACKTFGNL 227
+ ++ + G EA SL + + D V W G L + FGNL
Sbjct: 288 SVCNALLSFYLKVGRTKEAESLFWAMDAR-DLVSWNTIIAGYALNGEWLKSLHVFGNL 344
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 40/277 (14%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M+ K+ +SWNSI+ ++ H+ + L M + PD+ T+++I+ C+ + +
Sbjct: 415 MISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKK 474
Query: 61 GKKAHDY-------ICDNNITV----------------------------SVTLCNSLMN 85
K+ H Y +C TV ++ CNSL++
Sbjct: 475 VKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLIS 534
Query: 86 MYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEIT 145
Y G+ A IF GM + ++ +WN+++ A + ++A+E+F K++ G+ PD +T
Sbjct: 535 GYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVT 594
Query: 146 FTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
L+ C+ V + R G ++ S+F D+ ++D + G +G A + Q
Sbjct: 595 IMSLIPVCTQMASVHLLRQCHGYIIRSSF---EDLHLKGTLLDAYAKCGIIGYAYKIFQS 651
Query: 205 LPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ D V++ A++G G E + +L +G
Sbjct: 652 -SVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMG 687
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 113/279 (40%), Gaps = 41/279 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELF--CRMCVSGVMPDNATLVSILSSCSHMGDLA 59
M +N ++W S I + +H EA+ F C + PD+ L +IL SCS +
Sbjct: 1 MLQRNFMTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASN 60
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
LGK H Y+ +L+NMYAKCG L +F + + V WN+++ +
Sbjct: 61 LGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYS 120
Query: 120 LHGSG-KEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLM------SS 171
G + +++F M +SG + P +T +L C+ SG + G+ G +
Sbjct: 121 RSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMD 180
Query: 172 TFG-------------------------ISPDVAHYACMVDLLGRGGFLGEAMSLIQ--- 203
TF I DV + M+ L G L EA SL
Sbjct: 181 TFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMM 240
Query: 204 KLPMKPDAVVWGALLGACKTFGN---LEMGKQILKQLLE 239
K +KP+ +L C +F G+QI +L+
Sbjct: 241 KGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQ 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 122/263 (46%), Gaps = 11/263 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
M ++ VSWN+II+ + G+ +++ +F + + ++ D+ T+VSIL +C+ + +L
Sbjct: 313 MDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQA 372
Query: 61 GKKAHDYICDNNITVSVTLC-NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
GK+ H YI + T N+L++ YAKCG ++ A F + +K+++SWN I+ A
Sbjct: 373 GKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFG 432
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH----SGLVEMGRYYFGLMSSTFGI 175
+ + M + PD +T ++ C+ + E+ Y S
Sbjct: 433 EKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCAT 492
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
+P V + ++D + G + A + Q L K + V +L+ G+ I
Sbjct: 493 APTVGN--AILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFS 550
Query: 236 QLLELGRYDSGLYVLLSNMYSES 258
+ E D + L+ +Y+E+
Sbjct: 551 GMSET---DLTTWNLMVRVYAEN 570
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 173/317 (54%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N V+WNS++S ++ G+H+EA++L+ M V +T + +C+++ G+
Sbjct: 396 RNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLL 455
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ +V + +L++ Y+KCG L A F + NV +W +I A HG G
Sbjct: 456 HAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCG 515
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EAI F M G+ P+ TF +LSACSH+GLV+ G +F M + I+P + HY C
Sbjct: 516 SEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTC 575
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VDLLGR G + EA I ++P+K D V+WGALL A + N+E+G++ +L L
Sbjct: 576 VVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVELGERAAVKLFSLDPNS 635
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
V LSNMY+ RW KIRK + ++K + S IE++ + F V+D H S
Sbjct: 636 VSALVTLSNMYARRGRWGKKTKIRKRLQSLELRKDQGFSWIELNNNVHLFSVEDTTHPYS 695
Query: 305 TSIYSMVDQLMDHLKSV 321
IY V+ + + S+
Sbjct: 696 DVIYKTVEHITATINSI 712
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 110/236 (46%), Gaps = 38/236 (16%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP++ SWN++IS + Q G++ EA+ L M S V + + + LS+C+ G L LG
Sbjct: 63 MPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNEVSFSACLSACTRGGSLFLG 122
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKC--------------------------GALQT 95
K+ H + + + ++L++ Y +C G +Q
Sbjct: 123 KQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYVQR 182
Query: 96 -----AMDIFFGMPQKNVVSWNVIIGALALHGSG-KEAIEMFEKM-RASGLFPDEITFTG 148
AM+IF MP ++VV+W +I A G + A+++F M R+S + P+E T
Sbjct: 183 DMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDC 242
Query: 149 LLSACSHSGLVEMGRYYFGL-MSSTF----GISPDVAHYACMVDLLGRGGFLGEAM 199
+L C+ ++ +G+ GL + F +S +A + C+ D + + E+M
Sbjct: 243 VLRVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESM 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 16/222 (7%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAE-AMELF-CRMCVSGVMPDNATLVSILSSCSHMGDLA 59
MPV++ V+W ++IS + + E A++LF C S V+P+ TL +L C+ + L
Sbjct: 195 MPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILY 254
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK---NVVSWNVIIG 116
+GK H + ++ ++L Y A+ A ++ M + NV + +IG
Sbjct: 255 VGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVA--DSLIG 312
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
L G KEA +F +R L + + G + SG + + F MS S
Sbjct: 313 GLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGY----AMSGQFKKSKKLFEKMSLKHLTS 368
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ M+ + + G L EA+ L K + + V W +++
Sbjct: 369 LNT-----MITVYSKNGELDEAVKLFDKTKGERNCVTWNSMM 405
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 31/162 (19%)
Query: 87 YAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITF 146
+AK G L A +F MP + V SWN +I + G EA+ + M +S + +E++F
Sbjct: 47 HAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNEVSF 106
Query: 147 TGLLSACS-----------HSGLVEMGRYYFGLMSSTF--------GISP---------D 178
+ LSAC+ HS L + G FG + S GI D
Sbjct: 107 SACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRD 166
Query: 179 VAHYACMVDLLG--RGGFLGEAMSLIQKLPMKPDAVVWGALL 218
H + L G + +G+AM + +K+P++ D V W L+
Sbjct: 167 ENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVR-DVVAWTTLI 207
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
Query: 77 VTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALALHGSGKEAIEMFEKMR 135
+T N+++ +Y+K G L A+ +F ++N V+WN ++ +G EA++++ MR
Sbjct: 366 LTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMR 425
Query: 136 ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFL 195
+ TF+ L AC++ + G+ ++ T +V +VD + G L
Sbjct: 426 RFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKT-PYQENVYVGTALVDFYSKCGHL 484
Query: 196 GEAMSLIQKLPMKPDAVVWGALL 218
+A + P+ W AL+
Sbjct: 485 ADAQRSFTSI-FSPNVAAWTALI 506
>Medtr5g043920.1 | PPR containing plant-like protein | HC |
chr5:19295539-19293687 | 20130731
Length = 498
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 185/326 (56%), Gaps = 6/326 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V+ VSWNS+++ V+ ++ + F +M PD ++V +LS C+ +G L+LG
Sbjct: 172 MCVRTIVSWNSVMTACVENVWLSDGIGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLG 231
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + +SV L +L++MY K GAL A +F M ++NV +W+ +I LA H
Sbjct: 232 RWVHSQLILKGMVLSVHLGTALVDMYGKSGALGYARVVFERMEKRNVWTWSAMIMGLAQH 291
Query: 122 GSGKEAIEMFEKM---RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G +EA+ +F+ M +++ + P+ +T+ G+L ACSH+G+V+ G YF M GI P
Sbjct: 292 GFAEEALVLFDMMNDKKSNNISPNYVTYLGVLCACSHAGMVDEGFRYFRDMEFVHGIKPM 351
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTF---GNLEMGKQILK 235
+ HY MVD+LGR G LGEA IQ +P PD +VW LL AC +G ++ K
Sbjct: 352 MVHYGAMVDVLGRAGHLGEAYRFIQSMPFAPDPIVWRTLLSACTVHDVCDRTGIGDKVRK 411
Query: 236 QLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFM 295
+LLE+ G V+++NMY+E W+ +R++M D G+KK S +++ G Y+F
Sbjct: 412 RLLEMEPKRGGNLVIVANMYAEVGNWEKAANVRRVMRDGGLKKMAGESCVDLGGSMYRFF 471
Query: 296 VDDKNHEVSTSIYSMVDQLMDHLKSV 321
+ +Y ++D L HLK V
Sbjct: 472 AGHDSRPDLMPVYDLLDALNLHLKMV 497
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 2/223 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ +SWN +I + E++ +F +M +GV P+ T I SC+ L GK+ H
Sbjct: 75 SPISWNILIRGYASSDSPIESIWVFKKMRENGVKPNKLTYPFIFKSCAMALVLCEGKQVH 134
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ + V +CN+++N Y C + A +F M + +VSWN ++ A +
Sbjct: 135 ADLVKFGLDSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVENVWLS 194
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
+ I F KMR PDE + LLS C+ G + +GR+ + G+ V +
Sbjct: 195 DGIGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILK-GMVLSVHLGTAL 253
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
VD+ G+ G LG A + +++ K + W A++ G E
Sbjct: 254 VDMYGKSGALGYARVVFERME-KRNVWTWSAMIMGLAQHGFAE 295
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 184/289 (63%), Gaps = 5/289 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
M V++ VSW +I + + + +A+ LF +M V G+ P+ TL+++ + +H+G++ +
Sbjct: 206 MVVRSVVSWTLVIDGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKM 265
Query: 61 GKKAHDYICDNNIT-VSVTLCNSLMNMYAKCGALQTAMDIFFGMP--QKNVVSWNVIIGA 117
+ H Y+ V + + N+L+++YAKCG +++A +F MP ++N VSWN ++
Sbjct: 266 CESVHGYVEKRGFNAVDIRIVNALIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSG 325
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
A G +EA++ FEKM +G+ P+ + F +LSACSHSGLVE G +FG M + +G+ P
Sbjct: 326 YATFGMVREAVDTFEKMEKAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVP 385
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMK-PDAVVWGALLGACKTFGNLEMGKQILKQ 236
D+ HY C++D+LGR G LGEA + ++P + + V+W LLGAC N+E+GK++ K+
Sbjct: 386 DIKHYGCVIDMLGRAGRLGEAEKVALEVPHEAANDVIWRTLLGACSVHDNVEIGKRVTKK 445
Query: 237 LLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI 285
+LE+ + G YVL+SN+++ R+ D++++R++++ + K S +
Sbjct: 446 ILEMEKGHGGDYVLMSNIFASVGRFKDVERLREMIDKRNVFKLPGYSIV 494
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 33/234 (14%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF 100
D+ TL + +C+++ G H +C V + L++MY+ G L A +F
Sbjct: 113 DSFTLTFLAHACANLDTTHFGFHLHCIVCKMGFENHVFVQTGLLHMYSNWGFLVDAAQVF 172
Query: 101 FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKM----------------------RASG 138
MP +N V+WNV I L G + A +F++M +A
Sbjct: 173 GEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLVIDGYTRMNKPLKALA 232
Query: 139 LF----------PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
LF P+E+T + A +H G V+M G + + D+ ++DL
Sbjct: 233 LFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVDIRIVNALIDL 292
Query: 189 LGRGGFLGEAMSLIQKLP-MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ G + A L ++P + ++V W +++ TFG + +++ + G
Sbjct: 293 YAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKMEKAG 346
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 218 bits (554), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 176/319 (55%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN VS + +V++ +L + G + T S+LS + +G + G++
Sbjct: 430 KNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQI 489
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + +++ N+L++MY+KCG + A+ +F M NV++W II A HG
Sbjct: 490 HAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFA 549
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+A+E+F M +G+ P+++T+ +LSACSH GL++ +F M GI P + HYAC
Sbjct: 550 SKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYAC 609
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLLGR G L EA+ I +P DA+VW LG+C+ N ++G+ K +LE +D
Sbjct: 610 MVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHD 669
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
Y+LLSN+Y+ RW+D+ IRK M I K S IE++ ++F V D H +
Sbjct: 670 PATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKA 729
Query: 305 TSIYSMVDQLMDHLKSVGY 323
IY +D+L +K+VGY
Sbjct: 730 QQIYEKLDELALKIKNVGY 748
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 4/157 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLAL 60
M KN V+W +I+ Q G + EA++LF M VS G +PD TL ++S C+ + L+L
Sbjct: 221 MREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSL 280
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+ H ++ + + + + + SL++MYAKCG +Q A +F GM + NV+SW ++
Sbjct: 281 GKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVR 340
Query: 121 HGSG--KEAIEMFEKM-RASGLFPDEITFTGLLSACS 154
G G +EA+ MF M G+ P+ TF+G+L AC+
Sbjct: 341 GGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACA 377
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 130/284 (45%), Gaps = 52/284 (18%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALGKK 63
++ VS++SIISC +A+E+F ++ + GV P+ +++ +C G G
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177
Query: 64 AHDYICDNNITVS-VTLCNSLMNMYAK---CGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
++ S V + L++M+ K L++A +F M +KNVV+W ++I LA
Sbjct: 178 LFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLA 237
Query: 120 LHGSGKEAIEMF-EKMRASGLFPDEITFTGLLSACS-----------HS----------- 156
+G EAI++F E + +SG PD T TGL+S C+ HS
Sbjct: 238 QYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDL 297
Query: 157 -------------GLVEMGRYYFGLMSSTFGISPDVAHYACMVD--LLGRGGFLGEAMSL 201
GLV+ R F M +V + +V+ + G GG+ EAM +
Sbjct: 298 CVGCSLVDMYAKCGLVQEARKVFDGMR-----EHNVMSWTALVNGYVRGGGGYEREAMRM 352
Query: 202 IQKLPMK----PDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ ++ P+ + +L AC + + + G+Q+ Q ++LG
Sbjct: 353 FSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLG 396
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 7/184 (3%)
Query: 48 ILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP--Q 105
+L C + LGK H + +N+ + L NSL+ +Y+K TA IF M +
Sbjct: 58 LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117
Query: 106 KNVVSWNVIIGALALHGSGKEAIEMFEK-MRASGLFPDEITFTGLLSACSHSGLVEMGRY 164
++VVS++ II A + + +A+EMF++ + G++P+E FT ++ AC G + G
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177
Query: 165 YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGE---AMSLIQKLPMKPDAVVWGALLGAC 221
FG + T V ++D+ +G L + A + K+ K + V W ++
Sbjct: 178 LFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREK-NVVTWTLMITRL 236
Query: 222 KTFG 225
+G
Sbjct: 237 AQYG 240
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 104/243 (42%), Gaps = 5/243 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEG--QHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDL 58
M N +SW ++++ +V+ G EAM +F M + G V P+ T +L +C+ + D
Sbjct: 323 MREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDF 382
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
G++ H ++ + N L+++YAK G +++A F + +KN+VS V+
Sbjct: 383 DFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTN 442
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
+ ++ ++ G T+ LLS + G + G M G D
Sbjct: 443 VKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHA-MVVKIGFRTD 501
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
++ ++ + + G A+ + + + + W +++ G ++ +L
Sbjct: 502 LSVNNALISMYSKCGNKEAALQVFNDME-DCNVITWTSIINGFAKHGFASKALELFYNML 560
Query: 239 ELG 241
E G
Sbjct: 561 ETG 563
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/297 (38%), Positives = 173/297 (58%), Gaps = 14/297 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM--------CVSGVMPDNATLVSILSSCS 53
MP ++ VSW ++++ G A+ F M C+ V P+ AT VS+LSSC+
Sbjct: 176 MPYRDVVSWTTMVNGFALSGNFGAAIRFFGTMMRHKDVLDCL--VKPNEATYVSVLSSCT 233
Query: 54 HM---GDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS 110
+ G L G++ H YI + + V + SL+N+Y K G L + +F M + V +
Sbjct: 234 ELEGKGALDFGRQVHGYIVVKGVDLGVFVGTSLINLYGKMGCLNYSASVFRVMVVREVCT 293
Query: 111 WNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMS 170
WN +I +LA +G KEA+++FEKM+ GL P+ ITF +L+AC+ G V G F MS
Sbjct: 294 WNAMISSLASNGREKEALDLFEKMKLQGLKPNSITFVAVLTACARGGFVSEGLELFESMS 353
Query: 171 STFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMG 230
S F + P + HY C+VDLLGR G + EA +I+ +P PD V GA LGAC+ G +E+G
Sbjct: 354 SKFQVVPVMEHYGCVVDLLGRAGHIQEAAEIIRNMPFPPDKTVLGAFLGACRIHGAIELG 413
Query: 231 KQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEI 287
++I K +L+L G Y+LLS+MY+E +RW+ +R + ++GI K A S + +
Sbjct: 414 EEIAK-MLKLQTQHCGQYLLLSSMYAEKERWNHAADLRNEIMEAGIHKIPAFSMVHL 469
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 46/251 (18%)
Query: 29 LFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYA 88
L C+ G++ D L ++L + + +K + + I S N+++N +
Sbjct: 106 LHCQALKRGILSDPFVLTTLLVVYARTNHIVCAQKVFEEVPMFCIVAS----NAMINAFT 161
Query: 89 KCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMF-EKMRASGLF-----PD 142
G ++ A+ +F MP ++VVSW ++ AL G+ AI F MR + P+
Sbjct: 162 MNGNMEGALLVFEWMPYRDVVSWTTMVNGFALSGNFGAAIRFFGTMMRHKDVLDCLVKPN 221
Query: 143 EITFTGLLSACSH---SGLVEMGRYYFGLM----------------------------SS 171
E T+ +LS+C+ G ++ GR G + +S
Sbjct: 222 EATYVSVLSSCTELEGKGALDFGRQVHGYIVVKGVDLGVFVGTSLINLYGKMGCLNYSAS 281
Query: 172 TFG--ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGN 226
F + +V + M+ L G EA+ L +K+ +KP+++ + A+L AC G
Sbjct: 282 VFRVMVVREVCTWNAMISSLASNGREKEALDLFEKMKLQGLKPNSITFVAVLTACARGGF 341
Query: 227 LEMGKQILKQL 237
+ G ++ + +
Sbjct: 342 VSEGLELFESM 352
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 74/138 (53%), Gaps = 10/138 (7%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M V+ +WN++IS G+ EA++LF +M + G+ P++ T V++L++C+ G ++
Sbjct: 285 VMVVREVCTWNAMISSLASNGREKEALDLFEKMKLQGLKPNSITFVAVLTACARGGFVSE 344
Query: 61 GKKAHDYICDNNITVSV-TLCNSLMNMYAKCGALQTAMDIFFGM---PQKNVVSWNVIIG 116
G + + + V V ++++ + G +Q A +I M P K V+ +G
Sbjct: 345 GLELFESMSSKFQVVPVMEHYGCVVDLLGRAGHIQEAAEIIRNMPFPPDKTVLG--AFLG 402
Query: 117 ALALHGSGKEAIEMFEKM 134
A +HG AIE+ E++
Sbjct: 403 ACRIHG----AIELGEEI 416
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 184/318 (57%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N VSW ++IS Q ++ +A+++F +M V P++ T+ S+L +C+ L G++ H
Sbjct: 529 NVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELH 588
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ + + +L++MY++ G L+ A ++F + +K + WN ++ A+H G+
Sbjct: 589 CFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGE 648
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
E + +++KMR + PD ITFT LLSAC +SGLV+ G YF M + I P + HY CM
Sbjct: 649 EVMILYDKMRERHIRPDAITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCM 708
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
VDLLG+ GFL EA I+ +P+KPDA +WGALL +CK N+++ + ++L ++ +S
Sbjct: 709 VDLLGKSGFLDEASHFIETMPIKPDASIWGALLASCKIHKNIKLAEIAARKLFKMEPNNS 768
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
YVL+ N+YS RW +++++ M +K S +++ + F + + H
Sbjct: 769 ANYVLMMNLYSSLNRWVAVERLKHSMTVLAMKIPPVWSWTQVNQSIHVFSTEGRPHPEEG 828
Query: 306 SIYSMVDQLMDHLKSVGY 323
IY + QL+ ++ +GY
Sbjct: 829 EIYFELYQLISEIRKLGY 846
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 132/258 (51%), Gaps = 7/258 (2%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
++WNSI+S ++ G + F + G PD+ ++ S L + +G LGK+ H Y
Sbjct: 360 ITWNSILSGYLLRGSFEMVLTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGY 419
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
I +N+ V +C SL++MY K L+ A + KNV +WN +I + G EA
Sbjct: 420 IMRSNLNYDVYVCTSLVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEA 479
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+++ +M G+ PD +T+ GL+S S G ++ + S+ GI+P+V + ++
Sbjct: 480 VKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSS-GITPNVVSWTALIS 538
Query: 188 LLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+ +A+ + ++ +KP++ +LL AC L+ G+++ ++LG D
Sbjct: 539 GCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVD 598
Query: 245 SGLYV--LLSNMYSESQR 260
+YV L +MYSE+ +
Sbjct: 599 D-IYVATALIDMYSEAGK 615
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 133/327 (40%), Gaps = 41/327 (12%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P K WN+I+ +++ + A+ELFC M T V +L +C + L GK
Sbjct: 216 PYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKATVGTTVKMLQACGKLKALNEGK 275
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP--QKNVVSWNVIIGALAL 120
+ H Y + + +CNS+++MY++ + A +F M +N+ SWN +I + A+
Sbjct: 276 QLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSVIFSYAV 335
Query: 121 HGSGKEAIEMFEK-MRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G +A++ M SG+ PD IT+ +LS G EM F + S G PD
Sbjct: 336 DGCLNDALDTIRNGMECSGIKPDIITWNSILSGYLLRGSFEMVLTSFRSLHS-LGFKPDS 394
Query: 180 AH---------------------------------YAC--MVDLLGRGGFLGEAMSLIQK 204
Y C +VD+ + L +A +++ +
Sbjct: 395 CSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDMYVKNDCLEKAQAVLHR 454
Query: 205 LPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDD 263
K + W +L+ G ++L Q++E G D + L + YS R D+
Sbjct: 455 AKNK-NVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDE 513
Query: 264 MKKIRKIMNDSGIKKCRAISSIEIDGC 290
I + SGI + I GC
Sbjct: 514 ALTIINRIKSSGITPNVVSWTALISGC 540
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 106/269 (39%), Gaps = 66/269 (24%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN +WNS+IS + +GQ EA++L +M G+ PD T ++S S G +
Sbjct: 458 KNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRI------ 511
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
D +T+ +N G NVVSW +I + +
Sbjct: 512 -----DEALTI--------INRIKSSGI------------TPNVVSWTALISGCSQNEKY 546
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+A+++F +M+A + P+ T LL AC+ L++ G S G D+
Sbjct: 547 MDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGE-ELHCFSMKLGFVDDIYVATA 605
Query: 185 MVDLLGRGGFLGEAMSLIQK-----LP-----------------------------MKPD 210
++D+ G L A ++ K LP ++PD
Sbjct: 606 LIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPD 665
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLE 239
A+ + ALL ACK G ++ G + + E
Sbjct: 666 AITFTALLSACKNSGLVDEGWKYFDSMQE 694
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 102/274 (37%), Gaps = 37/274 (13%)
Query: 5 KNAVSWNSIIS-CHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+N + WNS + G E + +F M GV D+ +L C + + G +
Sbjct: 116 RNYLLWNSFLEEFESFGGDPFEILVVFNEMYSKGVEFDSKAFTFVLKICLALREFLFGLE 175
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + V V L +L+N Y KC ++ A +F P K WN I+ A
Sbjct: 176 VHACLIKKGFHVDVHLSCALINFYGKCWSIDKANQVFHETPYKEDFLWNTIVMANLRSER 235
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR------YYFGLMSSTFGISP 177
K A+E+F M+ T +L AC + G+ FGL+S+T +
Sbjct: 236 WKNALELFCDMQRDSAKATVGTTVKMLQACGKLKALNEGKQLHGYALRFGLVSNTLVCNS 295
Query: 178 DVAHYACMVDL-LGRGGF-------------------------LGEAMSLIQK----LPM 207
++ Y+ L R F L +A+ I+ +
Sbjct: 296 IISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGI 355
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
KPD + W ++L G+ EM + L LG
Sbjct: 356 KPDIITWNSILSGYLLRGSFEMVLTSFRSLHSLG 389
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 171/285 (60%), Gaps = 2/285 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+PV+N WNS+I+ +VQ G +A+E F M V G PD T+VS+LS+C+ +GDL G
Sbjct: 238 IPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAG 297
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H I I V+ + + L++MYAKCG L A +F ++NV WN +I A++
Sbjct: 298 KQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVN 357
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E +E ++M S + PD +TF +LSAC+H GLV M +GI + H
Sbjct: 358 GQCNEVLEYLDRMEESNIRPDAVTFITVLSACAHGGLVSEALEVISKMEE-YGIEMGIRH 416
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL-LEL 240
Y CMVDLLGR G L EA LI+++PMKP+ V GA++GAC +++M +Q++K + ++
Sbjct: 417 YGCMVDLLGRAGRLKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKMAEQVMKMIGVDS 476
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI 285
+ VLLSN+Y+ S++W+ + IR M D G +K SSI
Sbjct: 477 AACVNSHNVLLSNIYAASEKWEKSEMIRSSMVDGGSEKIPGCSSI 521
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 117/273 (42%), Gaps = 39/273 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K VSW+ +I + G A + F + V + D ++ + G++
Sbjct: 143 MPGKTRVSWSQMIGGFARNGDTLTARKFFDK--VPYELKDVVIWTMMVDGYAKKGEMEDA 200
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ + + + N V +S++ Y K G + A IF +P +N+ WN +I +
Sbjct: 201 REVFELMPERNYFV----WSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQN 256
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF------GLMSSTFGI 175
G G++A+E F +M G PDE T +LSAC+ G ++ G+ G+ + F +
Sbjct: 257 GCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVL 316
Query: 176 SPDVAHYACMVDLLG----------RGGFLGEAM-----------------SLIQKLPMK 208
S + YA DL+ R F AM +++ ++
Sbjct: 317 SGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMEESNIR 376
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
PDAV + +L AC G + +++ ++ E G
Sbjct: 377 PDAVTFITVLSACAHGGLVSEALEVISKMEEYG 409
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF 100
D + +L +C L K H V V + +++ YAKCG + A +F
Sbjct: 50 DPTVIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVF 109
Query: 101 FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE 160
M ++N V+WN +IG +G K A+ FE+M ++++ ++ + +G
Sbjct: 110 DLMHERNDVTWNAMIGGYLRNGDAKSALLAFEEMPGK----TRVSWSQMIGGFARNGDTL 165
Query: 161 MGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL-G 219
R +F + DV + MVD + G + +A + + +P + + VW +++ G
Sbjct: 166 TARKFFDKVPYEL---KDVVIWTMMVDGYAKKGEMEDAREVFELMPER-NYFVWSSMVCG 221
Query: 220 ACKTFGNLEMGKQILKQL 237
CK G++ + I +++
Sbjct: 222 YCKK-GDVMEAEAIFRRI 238
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 174/282 (61%), Gaps = 1/282 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ VSW S++S VQ ++ EA + F +M + G P +AT+ ++L +C+ + GK+ H
Sbjct: 267 DVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEIH 326
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
Y + + + ++L++MYAKCG + A +F+ MP+KN V+ N +I A HG +
Sbjct: 327 GYALVIGVEDDLYVRSALVDMYAKCGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCE 386
Query: 126 EAIEMFEKMRASGLFP-DEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EAIE+F +M G+ D +TFT L+ACSH G +E+G+ F +M + I P + HYAC
Sbjct: 387 EAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYAC 446
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDL GR G L EA +I+ +P+KPD VWGALL AC+ G++E+ + K L EL
Sbjct: 447 MVDLFGRAGKLEEAYGIIKSMPVKPDLFVWGALLAACRNHGHVELAEVAAKHLSELEPES 506
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
+G +LLS++Y+++ W +++I++ + ++K + +S I+
Sbjct: 507 AGNRLLLSSLYADAGTWGKVERIKRRIKKGKLRKLQGLSWID 548
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 9/263 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLV--SILSSCSHMGDLA 59
+P N W ++I+ + G H A+E+F M N+ V S+L +C H+GD
Sbjct: 90 IPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRI 149
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G++ H + + + + ++L+ MY+KCG ++ A +F GM K++V+ N ++ A
Sbjct: 150 YGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYA 209
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G EA+ + E M+ G+ P+ +T+ L+S + EM F LM+ + PDV
Sbjct: 210 QQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIFRLMNED-RVEPDV 268
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQ 236
+ ++ + EA +K+ + P + ALL AC T + GK+I
Sbjct: 269 VSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGY 328
Query: 237 LLELGRYDSGLYV--LLSNMYSE 257
L +G D LYV L +MY++
Sbjct: 329 ALVIGVEDD-LYVRSALVDMYAK 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMP-DNATLVSILSSCSHMGDLAL 60
MP KN V+ NS+I + G EA+ELF +M + GV D+ T + L++CSH+GD+ L
Sbjct: 364 MPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIEL 423
Query: 61 GKKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGAL 118
G++ + + I + +++++ + G L+ A I MP K ++ W ++ A
Sbjct: 424 GQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLFVWGALLAAC 483
Query: 119 ALHG 122
HG
Sbjct: 484 RNHG 487
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 86/227 (37%), Gaps = 35/227 (15%)
Query: 48 ILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN 107
++ + +H L GKK H + N + ++L+ +Y CG L A +F +PQ N
Sbjct: 35 LIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIPQTN 94
Query: 108 VVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFT--GLLSACSHSGLVEMGRYY 165
+ W +I A G A+E+F +M+ F +L AC H G G
Sbjct: 95 IHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQV 154
Query: 166 FGL-MSSTFGISP-----------------------------DVAHYACMVDLLGRGGFL 195
L + +F I D+ +V + G
Sbjct: 155 HCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLP 214
Query: 196 GEAMSLIQKLPM---KPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
EA+SL++ + + P+ V W AL+ + EM +I + + E
Sbjct: 215 NEALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIFRLMNE 261
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 190/346 (54%), Gaps = 24/346 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS------------------GVMPDNA 43
M K+ VSWN++I+ +V G+H +A+ L M + P++
Sbjct: 451 MNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSV 510
Query: 44 TLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM 103
TL+++L C+ + L GK+ H Y ++ V + ++L++MYAKCG L + +F M
Sbjct: 511 TLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQM 570
Query: 104 PQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASG-----LFPDEITFTGLLSACSHSGL 158
+NV++WNV+I A +HG G+EA+++F +M G + P+E+T+ + ++ SHSG+
Sbjct: 571 SVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGM 630
Query: 159 VEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAV-VWGAL 217
V+ G F M + GI P HYAC+VDLLGR G + EA +LI+ +P V W +L
Sbjct: 631 VDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSL 690
Query: 218 LGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIK 277
LGACK NLE+G+ K L L + YVLLSN+YS + WD +RK M + G++
Sbjct: 691 LGACKIHQNLEIGEIAAKNLFVLDPNVASYYVLLSNIYSSAGLWDQAIDVRKKMKEKGVR 750
Query: 278 KCRAISSIEIDGCCYQFMVDDKNHEVSTSIYSMVDQLMDHLKSVGY 323
K S IE ++F+ D +H S ++ ++ L +K GY
Sbjct: 751 KEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGY 796
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 124/296 (41%), Gaps = 67/296 (22%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ VSWN+IIS Q + EA+ M SGV P+ TL S+L +CSH+ L GK+
Sbjct: 250 KDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEI 309
Query: 65 HDYICDNNITVSVTLCN-SLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H ++ NN + + +L++MY C + +F GM ++ + WN +I +
Sbjct: 310 HAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEF 369
Query: 124 GKEAIEMFEKMRAS-GLFPDEITFTGLLSAC----------------------------- 153
EAIE+F +M GL P+ +T + +L AC
Sbjct: 370 DYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQN 429
Query: 154 ------SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLI----- 202
S G +E+ R FG M+ D+ + M+ G +A++L+
Sbjct: 430 ALMDMYSRMGRIEIARSIFGSMNRK-----DIVSWNTMITGYVVCGRHDDALNLLHDMQR 484
Query: 203 ----------------QKLPMKPDAVVWGALLGACKTFGNLEMGKQI----LKQLL 238
+ P+KP++V +L C L GK+I +KQ+L
Sbjct: 485 GQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQML 540
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 96/170 (56%), Gaps = 4/170 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHM-GDLALGKK 63
++ VSWNS+I+ + + A+ LF M + V P + TLVS+ +CS++ L LGK+
Sbjct: 149 RDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQ 208
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H ++ N + T N+L+ MYAK G + A +F K++VSWN II +L+ +
Sbjct: 209 VHAFVLRNGDWRTFT-NNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDR 267
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR--YYFGLMSS 171
+EA+ M SG+ P+ +T +L ACSH ++ G+ + F LM++
Sbjct: 268 FEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNN 317
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 116/251 (46%), Gaps = 21/251 (8%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
WN++I+ +V+ EA+ELF M G+ P++ TL S+L +C + H +
Sbjct: 357 WNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCV 416
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ N+LM+MY++ G ++ A IF M +K++VSWN +I + G +A+
Sbjct: 417 VKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDAL 476
Query: 129 EM------------------FEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMS 170
+ +E + L P+ +T +L C+ + G+
Sbjct: 477 NLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAV 536
Query: 171 STFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMG 230
+S DVA + +VD+ + G L + ++ +++ ++ + + W L+ A G E
Sbjct: 537 KQM-LSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVR-NVITWNVLIMAYGMHGKGEEA 594
Query: 231 KQILKQLLELG 241
++ ++++E G
Sbjct: 595 LKLFRRMVEEG 605
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 10/227 (4%)
Query: 25 EAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLM 84
+A+ + M +GV PDN ++L + + + DL LGK+ H ++ + + NS +
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSFV 127
Query: 85 NMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEI 144
NMY KCG + A +F + ++ VSWN +I A + A+ +F M + P
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187
Query: 145 TFTGLLSACSH--SGLVEMGR--YYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
T + ACS+ +GL+ +G+ + F L + + + A +V + + G + EA +
Sbjct: 188 TLVSVAHACSNLINGLL-LGKQVHAFVLRNGDWRTFTNNA----LVTMYAKLGRVYEAKT 242
Query: 201 LIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
L K D V W ++ + E L +L+ G +G+
Sbjct: 243 LFDVFDDK-DLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGV 288
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 173/283 (61%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSW S+I +V G +A+ LF + + D+ TL+ +L + S +G L+
Sbjct: 401 MRTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLSFI 460
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + +++ NSL+ YAKCG L TA IF M ++ + SWN +IGA A+H
Sbjct: 461 KEVHCFSYRFFHGKDLSVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYAMH 520
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ E +E+F+ M+A + PDE+TFT +L+ACSHSGLVE G FG+M + I P+ H
Sbjct: 521 GNYTEVLELFDHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNEVH 580
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+C+VDLL R G L EA +L++ +P + ALL AC+ +G+ E+G+ I KQ+L+L
Sbjct: 581 YSCIVDLLSRAGRLREAYNLVKSMPSTHSSAAMSALLSACRLYGDTEIGEAIGKQILKLE 640
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISS 284
+ SG Y L+SN+ ++ RWD++ +IR + ++ K S+
Sbjct: 641 PHSSGPYALVSNICAQGGRWDEVAQIRAMTKNTEFKSTPGYSA 683
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 2/222 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+AV +N +++ +++ G EA+ +F M + + A ++++S+ S + D+ L +
Sbjct: 303 KDAVVYNVMMTGYLENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLRDIRLVRSI 362
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H Y+ + V + N +++ YAK G + A ++F M +++VSW +I HG
Sbjct: 363 HGYVLRHMHITHVEIANQIIHAYAKFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYHGHI 422
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+AI +F ++ L D +T GLL A S G + + S F D++
Sbjct: 423 DKAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLSFIK-EVHCFSYRFFHGKDLSVNNS 481
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
++ + G L A + Q++ + W A++GA GN
Sbjct: 482 LITTYAKCGKLCTARYIFQQMTERC-LTSWNAMIGAYAMHGN 522
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 15/241 (6%)
Query: 37 GVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLC-NSLMNMYAKCGALQT 95
G++P+ TLVS++ + + + L G+ H Y I + + +L++MY KCG +
Sbjct: 130 GMLPNRVTLVSLMHAAAKLRALREGQAVHGYAVRREIGLGDDVFETTLLDMYHKCGGVGL 189
Query: 96 AMDIFFGMPQKN---VVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA 152
A +F M + V SWN +I +G EA E+F +M + PD +T +
Sbjct: 190 AASVFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMMCRNVLPDLLTLANAIFC 249
Query: 153 CSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAV 212
C + G G M T G+ D+ +VDL + + +A L ++L K DAV
Sbjct: 250 CVELNYLRRGMSIHGYM-ITMGVELDLVASTALVDLYCKID-ITKARKLFERLGNK-DAV 306
Query: 213 VWGALLGACKTFGNLEMGKQI--LKQLLELGRYDSGLYV-LLSNMYSESQRWDDMKKIRK 269
V+ ++ G LE G + + E+ + ++ V L N+ S + D++ +R
Sbjct: 307 VYNVMMT-----GYLENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLRDIRLVRS 361
Query: 270 I 270
I
Sbjct: 362 I 362
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 113/232 (48%), Gaps = 6/232 (2%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
SWN++I+ +++ GQ EA ELF RM V+PD TL + + C + L G H Y+
Sbjct: 207 SWNALIAGYLRNGQALEAFELFRRMMCRNVLPDLLTLANAIFCCVELNYLRRGMSIHGYM 266
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ + + +L+++Y K + A +F + K+ V +NV++ +G EA+
Sbjct: 267 ITMGVELDLVASTALVDLYCKID-ITKARKLFERLGNKDAVVYNVMMTGYLENGLPVEAV 325
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP-DVAHYACMVD 187
+F +M + + F L+SA S + + R G + I+ ++A+ ++
Sbjct: 326 NVFREMVKTNASTNVALFLNLISALSKLRDIRLVRSIHGYVLRHMHITHVEIANQ--IIH 383
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ G++ +A + ++ + D V W +++ G+++ IL +LL+
Sbjct: 384 AYAKFGYVVDAREVFNRMRTR-DLVSWTSMIKGYVYHGHIDKA-IILFRLLQ 433
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 170/290 (58%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V+WN +I Q G EA+ LF M + + + T +S + +CS++G L GK
Sbjct: 469 KSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWI 528
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I + + +L++MYAKCG LQTA +F + +K+VVSW+ +I A +HG
Sbjct: 529 HHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQI 588
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
A +F KM S + P+E+TF +LSAC H+G V+ G++YF M +GI P+V H+A
Sbjct: 589 NAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFAS 648
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VDLL R G + A +I+ + A +WGALL C+ +G ++M + I ++L + D
Sbjct: 649 IVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDD 708
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQF 294
+G Y LLSN+Y+E W + +K+R M G+KK S++EID Y+F
Sbjct: 709 TGYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGYSTVEIDRKIYRF 758
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 143/290 (49%), Gaps = 34/290 (11%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V++ V W+SIISC+V+ G + E +E+F M G+ PD+ L+S+ +C +G L L
Sbjct: 163 MCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLA 222
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H Y+ + +L NSL+ MY++CG L A +F + ++ W +I A +
Sbjct: 223 KSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQN 282
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR-YYFGLMSSTFGIS---- 176
+EA+++F KM+ S + P+++T +L++C+ G ++ G+ + ++ + G++
Sbjct: 283 ECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDL 342
Query: 177 --------------------------PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK-- 208
++ + ++ R G EAM+ + K
Sbjct: 343 GPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGI 402
Query: 209 -PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSE 257
PD+ + + A + G+++ G+QI +++ G +D + L +MYS+
Sbjct: 403 MPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEFVQNSLMDMYSK 452
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 124/234 (52%), Gaps = 3/234 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N VSWN++IS + +EG + EAM F M G+MPD+ +L S +S+ + G + G++
Sbjct: 369 ENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQI 428
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ + NSLM+MY+KCG +A IF + K++V+WN +I + +G
Sbjct: 429 HGHVMKRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGIS 487
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA+ +F++M + L +++TF + ACS+ G ++ G++ + T G D+
Sbjct: 488 VEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVT-GNQNDLYIDTA 546
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+VD+ + G L A + + ++ V W ++ A G + + +++
Sbjct: 547 LVDMYAKCGDLQTAQKVFDSI-VEKSVVSWSTMIAAHGIHGQINAATSLFHKMV 599
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 149/304 (49%), Gaps = 40/304 (13%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
W S+IS + Q EA+++F +M S V P++ T++S+L+SC+ +G L GK H ++
Sbjct: 272 WTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVL 331
Query: 70 DNNITVS-VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
N + V+ + L +L++ Y+ C + + + + +N+VSWN +I A G EA+
Sbjct: 332 RNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAM 391
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG---------RYYF------------- 166
F M A G+ PD + +SA + SG ++ G R +F
Sbjct: 392 AFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEFVQNSLMDMYS 451
Query: 167 --GLMSSTFGISPDVAH-----YACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGA 216
G SS + I + H + CM+ + G EA+SL ++ ++ + V + +
Sbjct: 452 KCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLS 511
Query: 217 LLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMKKIRKIMNDS 274
+ AC G L+ GK I +++ G + LY+ L +MY++ D++ +K+ DS
Sbjct: 512 AIQACSNLGYLDKGKWIHHKIIVTGNQND-LYIDTALVDMYAKC---GDLQTAQKVF-DS 566
Query: 275 GIKK 278
++K
Sbjct: 567 IVEK 570
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 100/221 (45%), Gaps = 5/221 (2%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV-MPDNATLV--SILSSCSHMGDLA 59
P ++ ++ +I CH+ E + LF G + N + S++ + + +G+L
Sbjct: 60 PSPDSFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELI 119
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
+G+K H I + + SL+ MY + L+ A +F M +++V W+ II
Sbjct: 120 VGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYV 179
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+G +E +EMF M G+ PD + + AC G + + + G + G+ D
Sbjct: 180 ENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMRE-GMVGDG 238
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+ ++ + + G+L A L + + + + W +++ A
Sbjct: 239 SLSNSLIVMYSQCGYLCRAKRLFECIDDRSTS-CWTSMISA 278
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 180/318 (56%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ WN +I+ Q G+ EA+ LF +M +G+ PD+ T VS+ ++C+ + L G++
Sbjct: 247 KDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACASLALLDEGRQT 306
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
+ + + +++ N+L+ MY+KCG + + F + ++VSWN II A A HG
Sbjct: 307 NALAIKHGLNSDLSVSNALVTMYSKCGEIVISELAFDQISHPDIVSWNTIIAAFAQHGLY 366
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
A F+ M +G+ PD ITF LLSAC +G V+ F LM +GI P HY+C
Sbjct: 367 DRARYYFDHMVTAGVTPDGITFLNLLSACCRAGKVDETVNLFDLMVHKYGILPRSEHYSC 426
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VD++ R G L A +IQ++P + DA +WGA L C N+++G+ + +L L Y+
Sbjct: 427 VVDVMSRAGQLLRACKVIQEMPFEADASIWGAFLVGCNIHSNVKLGELAARSILNLDPYN 486
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
SG YV++SN+Y+ + +W D+ ++R +M + GIKK A S ++I F+ D +H
Sbjct: 487 SGAYVMMSNIYAAAGKWKDVNRMRVLMKEQGIKKQTAYSWMQIGNKLQCFVGGDPSHPNI 546
Query: 305 TSIYSMVDQLMDHLKSVG 322
I+ + H+K+ G
Sbjct: 547 DDIHDASMMITLHMKAKG 564
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 124/314 (39%), Gaps = 75/314 (23%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P+KN VSWNSII+ +Q +A F M V NA ++S MG +
Sbjct: 86 IPIKNIVSWNSIITACIQNDNINDAFSYFTAMPEKNVASYNA----MMSGFVKMGRVEEA 141
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCG-----ALQTAM------------------- 97
KK + I N+ + + M M G AL AM
Sbjct: 142 KKVFEEIPRPNVVSYTVMIDGYMKMEGGSGIKRARALFDAMPSRNEVSWTVMISGLVENG 201
Query: 98 ------DIFFGMPQKNVVS-------------------------------WNVIIGALAL 120
++F MPQKNVV+ WN++I A
Sbjct: 202 LHEEAWEVFVRMPQKNVVAFTAMITGFCKQGKIDEAWNLFQQIRCKDRACWNIMITGFAQ 261
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G G+EA+ +F +M +G+ PD++TF L +AC+ L++ GR L + G++ D++
Sbjct: 262 NGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACASLALLDEGRQTNAL-AIKHGLNSDLS 320
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMK----PDAVVWGALLGACKTFGNLEMGKQILKQ 236
+V + + G + +I +L PD V W ++ A G + +
Sbjct: 321 VSNALVTMYSKCGEI-----VISELAFDQISHPDIVSWNTIIAAFAQHGLYDRARYYFDH 375
Query: 237 LLELGRYDSGLYVL 250
++ G G+ L
Sbjct: 376 MVTAGVTPDGITFL 389
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 110/258 (42%), Gaps = 40/258 (15%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV-------------------------M 39
K+ V++NS+++ + Q G + LF + + + M
Sbjct: 58 KDIVTYNSMLTAYWQNGFLQHSKSLFNSIPIKNIVSWNSIITACIQNDNINDAFSYFTAM 117
Query: 40 PDN--ATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAM 97
P+ A+ +++S MG + KK + I N+ + + M M G ++ A
Sbjct: 118 PEKNVASYNAMMSGFVKMGRVEEAKKVFEEIPRPNVVSYTVMIDGYMKMEGGSG-IKRAR 176
Query: 98 DIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG 157
+F MP +N VSW V+I L +G +EA E+F +M + + FT +++ G
Sbjct: 177 ALFDAMPSRNEVSWTVMISGLVENGLHEEAWEVFVRMPQKNV----VAFTAMITGFCKQG 232
Query: 158 LVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVW 214
++ F + D A + M+ + G EA++L ++ M+PD + +
Sbjct: 233 KIDEAWNLFQQIR-----CKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTF 287
Query: 215 GALLGACKTFGNLEMGKQ 232
+L AC + L+ G+Q
Sbjct: 288 VSLFTACASLALLDEGRQ 305
>Medtr3g037470.1 | TPR superfamily protein | HC |
chr3:13772234-13768538 | 20130731
Length = 424
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 174/289 (60%), Gaps = 9/289 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P KN + W S+IS +V+ + + +ELF M ++ V PD L + LS+C+ G L +G
Sbjct: 137 IPEKNIICWTSLISAYVENHKSNKGLELFRLMLMNNVEPDQIVLTTALSACADAGGLEMG 196
Query: 62 KKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ HD++ + + + L N+L+NMYAKCG + A +F K+V +W +I A+
Sbjct: 197 EWIHDFVRRKQGMKIDLHLNNALINMYAKCGDIGNARKLFDNTRNKDVTTWTSMIVGHAV 256
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG +EA+++F +M + P+++TF G+L ACSH+GLVE G+ F M+ +GI P
Sbjct: 257 HGEAREALQLFSEMNFI-VSPNDVTFIGVLMACSHAGLVEEGKRNFRSMNEDYGIEPREP 315
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
H+ CMVDL R G L EA I ++P+ P+AV+W LLGAC GNL++ ++ +L+ L
Sbjct: 316 HFGCMVDLFCRSGHLREAYDFIMEMPVPPNAVMWRTLLGACSLHGNLKLATEVRDKLINL 375
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRA--ISSIEI 287
G V LSN+Y++ + WD +KI+ + IK+ +A SSIE+
Sbjct: 376 DPGYVGDSVALSNIYADKEMWD-----KKIIVRNQIKQSKAHGFSSIEV 419
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 41 DNATLVSILSSCSHMG-DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDI 99
D+ + + L +C + LGK+ H I + L SL+ +YA G L A +
Sbjct: 74 DSFSFLYTLKACINKNHSYVLGKQLHSLIIKFGYESIIQLQTSLLKVYAGGGNLFDAHQV 133
Query: 100 FFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLV 159
F +P+KN++ W +I A + + +E+F M + + PD+I T LSAC+ +G +
Sbjct: 134 FDEIPEKNIICWTSLISAYVENHKSNKGLELFRLMLMNNVEPDQIVLTTALSACADAGGL 193
Query: 160 EMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
EMG + + G+ D+ ++++ + G +G A L K D W +++
Sbjct: 194 EMGEWIHDFVRRKQGMKIDLHLNNALINMYAKCGDIGNARKLFDNTRNK-DVTTWTSMIV 252
Query: 220 ACKTFGNLEMGKQILKQL 237
G Q+ ++
Sbjct: 253 GHAVHGEAREALQLFSEM 270
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/322 (36%), Positives = 178/322 (55%), Gaps = 3/322 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N ++W ++IS Q G EA +F +M +G+ P++ ++ S LS+C++M L G+ H
Sbjct: 552 NLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIH 611
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
Y+ N ++ S+ + S+++MYAKCG L A +F K + +N +I A A HG
Sbjct: 612 GYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKSA 671
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+ +F+++ G+ PD ITFT +LSACSH L++ G F M + P HY C+
Sbjct: 672 EALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHYGCL 731
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
V LL G L EA+ +I +P PDA + G+LL AC E+ I K LL++ +
Sbjct: 732 VKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHETELANYIAKWLLKVEPNNP 791
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
G YV LSN+Y+ +WD++ IR M + G+KK S IE+ F+ DK+H
Sbjct: 792 GNYVALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCSWIEVGQELNVFIASDKSHPEKE 851
Query: 306 SIYSMVDQL---MDHLKSVGYP 324
IY ++D L M + KS +P
Sbjct: 852 EIYKILDLLGFEMYYAKSNPHP 873
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 137/275 (49%), Gaps = 15/275 (5%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-----VSGVMPDNATLVSILSSCSHM 55
M +K+ V+WN +IS +VQ G +A+E MC + D TL S+L+ +
Sbjct: 374 MAVLKDEVTWNLMISSYVQFGMFEKALE----MCHWMREEENLRFDCVTLSSLLALAADT 429
Query: 56 GDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF-FGMPQKNVVSWNVI 114
D+ LGKK H + N + + + +++MYAKCG + A +F F +K++V WN +
Sbjct: 430 RDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTM 489
Query: 115 IGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
+ A A G EA+++F +M+ + P+ +++ L+ +G V + F M + G
Sbjct: 490 LAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLS-G 548
Query: 175 ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGK 231
++P++ + M+ L + G EA + Q++ M+P+++ + L AC L G+
Sbjct: 549 VTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGR 608
Query: 232 QILKQLLE-LGRYDSGLYVLLSNMYSESQRWDDMK 265
I ++ + + + +MY++ DD K
Sbjct: 609 SIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAK 643
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 6/229 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N S+ +I+ + G + EA+ + M G PDN + + L +C + + G+
Sbjct: 170 QNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRGI 229
Query: 65 HDYICD--NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP--QKNVVSWNVIIGALAL 120
H ++ N V + SL++MY KCG L+ A +F MP ++N V WN +I
Sbjct: 230 HGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQ 289
Query: 121 HGSGKEAIEMFEKMR-ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+G EA+ +FEKMR G+ P E++ +G SAC++ VE G+ L+ G +
Sbjct: 290 NGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALV-ILMGFELNY 348
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
+ +++ + G + E + + + + D V W ++ + FG E
Sbjct: 349 VLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFE 397
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 132/273 (48%), Gaps = 20/273 (7%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLALGKK 63
+N V WNS+I +VQ G + EA+ LF +M G V P +L S+C+++ + GK+
Sbjct: 275 RNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQ 334
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALALHG 122
H + ++ L +S+MN Y+K G ++ +F M K+ V+WN++I + G
Sbjct: 335 GHALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFG 394
Query: 123 SGKEAIEMFEKMR-ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL-MSSTFGISPDVA 180
++A+EM MR L D +T + LL+ + + V++G+ G + + F D+A
Sbjct: 395 MFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEF--YSDMA 452
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC----------KTFGNLEM- 229
+ ++D+ + G + A + K D V+W +L AC K F ++M
Sbjct: 453 VLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQME 512
Query: 230 ---GKQILKQLLELGRYDSGLYVLLSNMYSESQ 259
+ L G + +G V +M+SE Q
Sbjct: 513 SVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQ 545
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 174/285 (61%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
++P K+A + +S++S + Q G E+ LF M + D T+ SIL + S + +
Sbjct: 597 ILPHKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGAASLLCQSDI 656
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H YI + V++ +SL+ MY+KCG+++ F + + +++ W +I + A
Sbjct: 657 GTQLHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKAFDDVEKPDLIGWTSLILSYAQ 716
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G +A+ +E M++ G+ PD +TF G+LSACSHSGLVE +Y M + I+P
Sbjct: 717 HGKGADALAAYELMKSEGVEPDAVTFVGILSACSHSGLVEEAFFYLNSMIEDYKITPSHR 776
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYAC+VD+LGR G L EA S I +P++P+A++WG LL ACK G+ E+GK ++++ L
Sbjct: 777 HYACIVDILGRSGRLREAESFINNMPVEPNALIWGTLLAACKVHGDFELGKLAAEKVMGL 836
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI 285
D G YV SN+ ++ ++W+++ KIR +N +G+KK A S +
Sbjct: 837 EPSDVGAYVSFSNICADGEQWEEVTKIRSSLNKTGMKKEPAWSVV 881
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N SWN+IIS V+ G++ A+ LF MC + +MP++ T SIL++C + ++ +GK H
Sbjct: 201 NVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILTACCALKEMQIGKGVH 260
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
T V + +++++YAK G + A F M +NVVSW II
Sbjct: 261 GLAIKCGAT-DVFVETAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTAIISGFVQQDDTT 319
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
A+++F+ MR G + T T +LSAC+ L+E + L+ G+ +V A +
Sbjct: 320 FALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEEAKQIHSLVLK-LGLILNVKVGAAL 378
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
V++ + G +G + ++ D +W ++L +
Sbjct: 379 VNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLSS 413
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 109/215 (50%), Gaps = 2/215 (0%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
VK+ VSW S+IS V+ G +A+ LF M V+PD+ TL+SIL++C+ + L G++
Sbjct: 499 VKDNVSWASMISGFVEHGYPDQALRLFKEMLYQEVVPDHITLISILTACADLRLLRTGRE 558
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + + + +L+NMY+KCG+L A +F +P K+ + + ++ A +G
Sbjct: 559 IHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLARKVFDILPHKDAFACSSLVSGYAQNGL 618
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+E+ +F M + D T T +L A S ++G + G+ DV+ +
Sbjct: 619 IEESFLLFHDMLRNDETVDAFTITSILGAASLLCQSDIGTQLHAYIEK-LGLQADVSVGS 677
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
++ + + G + + + KPD + W +L+
Sbjct: 678 SLLTMYSKCGSIEDCRKAFDDVE-KPDLIGWTSLI 711
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 3/234 (1%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
VSWN +IS +V+ +++E+FCRM + G PD + S+LS+C + G +
Sbjct: 102 VSWNVMISGYVRNSMFLKSLEMFCRMHLFGFEPDEFSYGSVLSACVALQASMFGLQVFSL 161
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ N S + +++M+ K A+ F NV SWN II +G + A
Sbjct: 162 VVKNGFLSSGYVQTQMVDMFCKNCNFSEALRFFNDASCDNVASWNAIISLAVKNGENQVA 221
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+ +F +M + L P+ TF +L+AC +++G+ GL + DV +VD
Sbjct: 222 LNLFSEMCRASLMPNSYTFPSILTACCALKEMQIGKGVHGLAIKCG--ATDVFVETAIVD 279
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
L + G + EA ++ ++ + V W A++ + ++ K + ++G
Sbjct: 280 LYAKFGCMSEAYRQFSQMQVQ-NVVSWTAIISGFVQQDDTTFALKLFKDMRQIG 332
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 109/230 (47%), Gaps = 9/230 (3%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M +K+ W S++S Q A+ELF M GV PD I S S M L+L
Sbjct: 398 MKNMKDPGIWASMLSSFAQNRNSGRALELFTVMLREGVKPDE---YCIGSLLSIMSSLSL 454
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H YI + + T+ SL MY+KCG L+ + ++F K+ VSW +I
Sbjct: 455 GSQVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVE 514
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTF--GISPD 178
HG +A+ +F++M + PD IT +L+AC+ L+ GR G STF G+ +
Sbjct: 515 HGYPDQALRLFKEMLYQEVVPDHITLISILTACADLRLLRTGREIHG---STFRLGLGTN 571
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
+V++ + G L A + LP K DA +L+ G +E
Sbjct: 572 TVVGGALVNMYSKCGSLSLARKVFDILPHK-DAFACSSLVSGYAQNGLIE 620
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 32/315 (10%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V+N VSW +IIS VQ+ A++LF M G + T+ S+LS+C+ +
Sbjct: 297 MQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEEA 356
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ-KNVVSWNVIIGALAL 120
K+ H + + ++V + +L+NMYAK G + + F M K+ W ++ + A
Sbjct: 357 KQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLSSFAQ 416
Query: 121 HGSGKEAIEMFEKMRASGLFPDE-------------ITFTGLLSACSHSGLV---EMGRY 164
+ + A+E+F M G+ PDE + + S +GLV +G
Sbjct: 417 NRNSGRALELFTVMLREGVKPDEYCIGSLLSIMSSLSLGSQVHSYILKAGLVTNATVGCS 476
Query: 165 YF------GLMSSTF-----GISPDVAHYACMVDLLGRGGFLGEAMSLIQKL---PMKPD 210
F G + ++ I D +A M+ G+ +A+ L +++ + PD
Sbjct: 477 LFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEMLYQEVVPD 536
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLELGR-YDSGLYVLLSNMYSESQRWDDMKKIRK 269
+ ++L AC L G++I LG ++ + L NMYS+ +K+
Sbjct: 537 HITLISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLARKVFD 596
Query: 270 IMNDSGIKKCRAISS 284
I+ C ++ S
Sbjct: 597 ILPHKDAFACSSLVS 611
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 102/235 (43%), Gaps = 39/235 (16%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
+SL+ +Y K + A +F + Q ++VSWNV+I + +++EMF +M G
Sbjct: 74 DSLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVRNSMFLKSLEMFCRMHLFGFE 133
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYF------GLMSSTFGISP----------------- 177
PDE ++ +LSAC G F G +SS + +
Sbjct: 134 PDEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLSSGYVQTQMVDMFCKNCNFSEALRF 193
Query: 178 -------DVAHYACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNL 227
+VA + ++ L + G A++L ++ + P++ + ++L AC +
Sbjct: 194 FNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILTACCALKEM 253
Query: 228 EMGKQILKQLLELGRYDSGLYVLLSNMY------SESQRWDDMKKIRKIMNDSGI 276
++GK + ++ G D + + ++Y SE+ R +++ +++ + I
Sbjct: 254 QIGKGVHGLAIKCGATDVFVETAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTAI 308
>Medtr8g063450.1 | PPR containing plant-like protein | HC |
chr8:26602939-26605163 | 20130731
Length = 699
Score = 211 bits (536), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 173/315 (54%), Gaps = 13/315 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M VK+ +WNS+++ +VQ G+ +A+ LF ++ V D+ T +++ CS + L LG
Sbjct: 368 MDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLG 427
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H +++ V N Y + A F N + WN II A H
Sbjct: 428 QQVH------VLSLKVGFDT---NKYVG----KDAKKCFETTSNDNAIIWNSIIFGYAQH 474
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G A+E+F MR + PD ITF +L+ACSH+GLVE GR M S FGI + H
Sbjct: 475 GQGNIALELFYLMREKKVKPDHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLRMEH 534
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YAC VDL GR G+L E +L++ +P +PDA+V LLGAC++ GN+E+ + K LL L
Sbjct: 535 YACAVDLYGRAGYLEEGKALVETMPFEPDAMVLRTLLGACRSCGNIELASHVAKMLLVLE 594
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
D YVLLS++Y + WD+ + ++M + G+KK S IE+ + F +D +H
Sbjct: 595 PEDHSTYVLLSDLYGRLKMWDEKASVTRLMRERGVKKVPGWSWIEVKNKVHAFNAEDHSH 654
Query: 302 EVSTSIYSMVDQLMD 316
S IY ++ QL +
Sbjct: 655 PQSKEIYELLLQLKE 669
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 124/260 (47%), Gaps = 32/260 (12%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V+WNS+++ ++ + A ++F M G PD+ + ++S CS + G+
Sbjct: 268 RDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGESL 327
Query: 65 HDYICDNNITVSVTLCNSLMNMY----AKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
H + VSV + N+L+ MY +C ++ A+ IFF M K+ +WN ++
Sbjct: 328 HGLVIKRGAEVSVPVSNALIAMYLGFDNRC--MEDALRIFFSMDVKDCCTWNSVLAGYVQ 385
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G ++A+ +F ++R+ + D+ TF+ ++ CS +++G+ L + + D
Sbjct: 386 VGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVL---SLKVGFDTN 442
Query: 181 HY----------------ACMVDLL-------GRGGFLGEAMSLIQKLPMKPDAVVWGAL 217
Y A + + + G+G E L+++ +KPD + + A+
Sbjct: 443 KYVGKDAKKCFETTSNDNAIIWNSIIFGYAQHGQGNIALELFYLMREKKVKPDHITFVAV 502
Query: 218 LGACKTFGNLEMGKQILKQL 237
L AC G +E G++I++ +
Sbjct: 503 LTACSHNGLVEEGRKIIQSM 522
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSWN++IS +V +L M VSG DN T S L + L LG
Sbjct: 60 MPQRDTVSWNAVISGYVNTADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELG 119
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + + +V ++L++MYAKCG + A+ +F MP+ N VSWN +I +
Sbjct: 120 QQLHSVMIKMRLNENVFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRV 179
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLS 151
G A + G+ D+ T + LL+
Sbjct: 180 GDLDMAFWLMRCQELEGVGIDDGTVSPLLT 209
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP N VSWN++I+ + + G A L + GV D+ T+ +L+ + +L
Sbjct: 161 MPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGIDDGTVSPLLTLLDGVRFYSLV 220
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ---KNVVSWNVIIGAL 118
+ H I + + +CN+++ Y++C +LQ A +F G +++V+WN ++ A
Sbjct: 221 MQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSMLAAY 280
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
LH A ++F +M++ G PD+ ++TG++S CS
Sbjct: 281 LLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCS 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 3/167 (1%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
N+L+ Y+KC L A+ +F MPQ++ VSWN +I ++ MR SG
Sbjct: 38 NNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTADLDSTWQLLNAMRVSGHA 97
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
D TF L + + +E+G+ +M ++ +V + ++D+ + G + +A+
Sbjct: 98 FDNHTFGSTLKGVARAQRLELGQQLHSVMIK-MRLNENVFSGSALLDMYAKCGRVDDALV 156
Query: 201 LIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK-QLLELGRYDSG 246
+ + +P + + V W L+ G+L+M +++ Q LE D G
Sbjct: 157 VFRYMP-ECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGIDDG 202
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 211 bits (536), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 166/285 (58%), Gaps = 2/285 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K WN+++S V A++LF M + V PD+ T S+L + + + DL
Sbjct: 380 KRTAPWNAVLSGFVHNRLARNAVQLFKEMLLENVQPDSPTFNSLLPAYAILADLKQAMNM 439
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP--QKNVVSWNVIIGALALHG 122
H Y+ + + + L+++Y+KCG L A IF +P K+++ W II A HG
Sbjct: 440 HCYLVKLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHG 499
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
G+ A+ +F +M SG P+E+TFT +L ACSH+GLV+ G F LM + + P V HY
Sbjct: 500 YGEMAVSLFNQMVQSGEKPNEVTFTSVLHACSHAGLVDQGLSLFNLMLKKYQVIPSVDHY 559
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
C+VDLLGR G L +A +LI+ +P+ + VWGALLGAC N+E+G+ + EL
Sbjct: 560 TCIVDLLGRAGRLNDAYNLIRTMPITHNHAVWGALLGACVIHENVELGEIAARWTFELEP 619
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEI 287
++G YVLL+ +Y+ RW D +++R ++N+ G++K A S +E+
Sbjct: 620 ENTGNYVLLAKLYAAVGRWRDAERVRNMVNEVGLRKTPANSLVEL 664
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 24/253 (9%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ V+W ++I+ +V G A+ L M + GV P+ ++ S+LS+C + L G
Sbjct: 276 MEEKDVVTWTTLINGYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLKHG 335
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + NI V + +L++MYAKC + +F +K WN ++ +
Sbjct: 336 KCLHAWAIRQNIESEVVMETALIDMYAKCNEGNLSYKVFMKTSKKRTAPWNAVLSGFVHN 395
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMGRYYFGLMS 170
+ A+++F++M + PD TF LL A + H LV++G
Sbjct: 396 RLARNAVQLFKEMLLENVQPDSPTFNSLLPAYAILADLKQAMNMHCYLVKLG-------- 447
Query: 171 STFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK-PDAVVWGALLGACKTFGNLEM 229
F +VA + +VD+ + G LG A + +P+K D ++W A++ A G EM
Sbjct: 448 --FLCKLEVA--SMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHGYGEM 503
Query: 230 GKQILKQLLELGR 242
+ Q+++ G
Sbjct: 504 AVSLFNQMVQSGE 516
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 87/153 (56%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M + VSWN++I+ + +A+ ++ RM GV D AT+VS+L +C + ++ L
Sbjct: 174 LMQERTVVSWNTLINGLFRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVEL 233
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ + +V + N+L++MY KCG ++ A + GM +K+VV+W +I +
Sbjct: 234 GREVRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGMEEKDVVTWTTLINGYVV 293
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
+G + A+ + M+ G+ P+ ++ LLSAC
Sbjct: 294 NGDARSALMLCRSMQLEGVKPNLVSVASLLSAC 326
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
+P +N SWN+++ +VQ G+ +A+ +F M SG MPD+ T ++ +CS + + +
Sbjct: 73 LPKRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKACSELLFVDM 132
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G H ++ + NSL+ MY G + A +F M ++ VVSWN +I L
Sbjct: 133 GVGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVFELMQERTVVSWNTLINGLFR 192
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+ ++A+ ++ +M G+ D T +L AC VE+GR L G +V
Sbjct: 193 NNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELGREVRALTLEK-GYWGNVV 251
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
++D+ + G + EA L+ + K D V W L+
Sbjct: 252 VRNALLDMYVKCGEMEEARLLLNGMEEK-DVVTWTTLIN 289
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 106/265 (40%), Gaps = 46/265 (17%)
Query: 47 SILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK 106
S+L S L+ KK H I + S L + L YA+C A +F +P++
Sbjct: 17 SLLRKYSASNSLSETKKLHALIITYGLFSSSQLSSKLATTYAQCHHASYASQLFDKLPKR 76
Query: 107 NVVSWNVIIGALALHGSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMG--- 162
N+ SWN ++ G +A+ MF +M SG PD T+ ++ ACS V+MG
Sbjct: 77 NLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKACSELLFVDMGVGV 136
Query: 163 --------------------------------RYYFGLMSSTFGISPDVAHYACMVDLLG 190
R F LM V + +++ L
Sbjct: 137 HGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVFELMQER-----TVVSWNTLINGLF 191
Query: 191 RGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
R +A+ + ++ + D ++L AC N+E+G+++ LE G + G
Sbjct: 192 RNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELGREVRALTLEKGYW--GN 249
Query: 248 YVLLSNMYSESQRWDDMKKIRKIMN 272
V+ + + + +M++ R ++N
Sbjct: 250 VVVRNALLDMYVKCGEMEEARLLLN 274
>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0493:2001-4149 | 20130731
Length = 611
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 176/318 (55%), Gaps = 14/318 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +++ SW+++I + G +A F + P +L +LS+C+ G G
Sbjct: 212 MKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFG 271
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H ++ V++ N+L++ Y+KCG + A +F N+ +LA+H
Sbjct: 272 KILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVF-----------NI---SLAMH 317
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EAI +F +M SG+ PD +TF LL ACSHSGLVE G F M + +GI P + H
Sbjct: 318 GRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEH 377
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDL GR L +A I+++P+ P+ ++W LLGAC GN+E+ + + +L E+
Sbjct: 378 YGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSIHGNIELAELVKARLAEMD 437
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+SG +VLLSN+Y+ + +W D+ IR+ M + +KK S IEID Y F+ +K +
Sbjct: 438 PNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSMKKIPGWSMIEIDKVNYGFVAGEKPN 497
Query: 302 EVSTSIYSMVDQLMDHLK 319
EV+ + + ++M L+
Sbjct: 498 EVTKEAHDKLREIMLRLR 515
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 125/325 (38%), Gaps = 71/325 (21%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSS-----CSHM 55
P + +N++I +++ F ++ ++PD+ + L CS
Sbjct: 71 FPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCSKR 130
Query: 56 GDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVII 115
+ L A + D++I V TL ++MYA+CG + A +F M Q NVV+WN ++
Sbjct: 131 QGIQLHSHAFRHGFDDHIFVGTTL----ISMYAECGCYEYARKVFDEMSQPNVVAWNAVV 186
Query: 116 GA--------------------------------------LALHGSGKEAIEMFEKMRAS 137
A A GS +A F+++
Sbjct: 187 TACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRD 246
Query: 138 GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL--------- 188
P E++ TG+LSAC+ +G E G+ G M G V+ ++D
Sbjct: 247 RNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKA-GFLCIVSVNNALIDTYSKCGNVDM 305
Query: 189 --------LGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
L G EA+ + ++ ++PD V + +LL AC G +E G + ++
Sbjct: 306 AKLVFNISLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKM 365
Query: 238 LELGRYDSGL--YVLLSNMYSESQR 260
+ + Y + ++Y + R
Sbjct: 366 RNFYGIEPAIEHYGCMVDLYGRAAR 390
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/316 (37%), Positives = 180/316 (56%), Gaps = 2/316 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
M +N W ++I+ +VQ G A+ LF M + P+ +LVS+L +C + L
Sbjct: 298 MKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMG 357
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF-FGMPQKNVVSWNVIIGALA 119
GK+ H + ++L N+L++MYAKCG+L A +F G K+ ++W+ II A
Sbjct: 358 GKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYG 417
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
LHG G+EA+ + +M G+ PD IT G+LSAC SGLV+ G + +++ + + P V
Sbjct: 418 LHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSV 477
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
C+VDLLGR G L +A+ I+++P+ P VWG+LL A GN + LLE
Sbjct: 478 EICGCVVDLLGRSGQLDQALDFIREMPIIPGPSVWGSLLTASVIHGNSMTRDLAYRCLLE 537
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
L + Y+ LSN Y+ S+RWD++ ++R +M + G++K IS I I + F V DK
Sbjct: 538 LEPENPSNYISLSNTYASSRRWDEITEVRSMMKERGLRKVPGISWITISDKNHFFTVADK 597
Query: 300 NHEVSTSIYSMVDQLM 315
H S+SIY M+D L+
Sbjct: 598 VHPSSSSIYEMLDDLV 613
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 11/248 (4%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
KN WNS+I+ +V+ Q A+ LF +M ++PD+ TL +I + DL LGK
Sbjct: 89 TKNVYLWNSLINGYVKNHQFDNAIVLFRQMG-RCLLPDDYTLATISKVSGEIQDLVLGKL 147
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + + NS+M+MY +C AM +F MPQ+NV S+NVII A G+
Sbjct: 148 IHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGN 207
Query: 124 GKEAI-----EMFEKMRASGLFPDEITFTGLLSACSHS-GLVEMGRY---YFGLMSSTFG 174
++ F +M+ G D T LL C S G + GR Y
Sbjct: 208 LDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLK 267
Query: 175 ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
+ DV + ++D+ R L + + ++ + + VW A++ G E +
Sbjct: 268 MCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSR-NIYVWTAMINGYVQNGAPEGALILF 326
Query: 235 KQLLELGR 242
+++ R
Sbjct: 327 REMQRKDR 334
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 111/259 (42%), Gaps = 28/259 (10%)
Query: 2 MPVKNAVSWNSIISCHVQEGQ-----HAEAMELFCRMCVSGVMPDNATLVSILS-SCSHM 55
MP +N S+N IIS G +A+ F RM G D T+ S+L C
Sbjct: 187 MPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSD 246
Query: 56 GDLALGKKAHDYICDNNITVS----VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSW 111
G G++ H Y+ N + + V + +SL++MY++ L + +F M +N+ W
Sbjct: 247 GKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVW 306
Query: 112 NVIIGALALHGSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMS 170
+I +G+ + A+ +F +M R + P+ ++ +L AC GL+ GLM
Sbjct: 307 TAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPAC---GLL------VGLMG 357
Query: 171 S----TFGISPDVAHYA----CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACK 222
F I + Y ++D+ + G L A + DA+ W +++ A
Sbjct: 358 GKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYG 417
Query: 223 TFGNLEMGKQILKQLLELG 241
G + ++L+ G
Sbjct: 418 LHGKGQEALTTYYEMLQQG 436
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 5/189 (2%)
Query: 40 PDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDI 99
P N L+ +L + L L ++ H I N + + L L++ YA G + +
Sbjct: 26 PHN--LLHLLQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLV 83
Query: 100 FFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLV 159
F + KNV WN +I + AI +F +M L PD+ T + +
Sbjct: 84 FDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQM-GRCLLPDDYTLATISKVSGEIQDL 142
Query: 160 EMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
+G+ G S G D+ ++ + R G+AM + ++P + + + ++
Sbjct: 143 VLGKLIHG-KSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQR-NVGSFNVIIS 200
Query: 220 ACKTFGNLE 228
C GNL+
Sbjct: 201 GCAALGNLD 209
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 162/275 (58%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
VK+ VSWN +I+ ++ G EA+ F RM + V P+ T V+IL + S++ L
Sbjct: 565 VKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMA 624
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H I + NSL++MYAKCG L+ + F M K+ +SWN ++ A A+HG
Sbjct: 625 FHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQ 684
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
G+ A+ +F M+ S + D +++ +LSAC HSGL++ G F M + P + HYA
Sbjct: 685 GELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYA 744
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
CMVDLLG G E +SL+ K+ +PDA VWGALL ACK N+ +G+ + LL+L
Sbjct: 745 CMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPR 804
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
+ +V+LS++Y++ RW+D ++ R +N+ G+KK
Sbjct: 805 NPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKK 839
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 18/257 (7%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +K+ V WN++I+ + G A+E+F R+ +SG++PD+ T+V + S+C+ M DL LG
Sbjct: 461 MQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLG 520
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ-KNVVSWNVIIGALAL 120
H I + + + +LM+MYAKCG+L + +F K+ VSWNV+I
Sbjct: 521 TCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLH 580
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY------FGLMSSTF- 173
+G EAI F +M+ + P+ +TF +L A S+ ++ + G +S T
Sbjct: 581 NGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLI 640
Query: 174 GISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
G S ++D+ + G L + ++ K D + W A+L A G E+ +
Sbjct: 641 GNS--------LIDMYAKCGQLRYSEKCFHEMENK-DTISWNAMLSAYAMHGQGELAVAL 691
Query: 234 LKQLLELG-RYDSGLYV 249
+ E R DS Y+
Sbjct: 692 FSVMQESNVRVDSVSYI 708
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 1/215 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V+W++ +S V+ G E + +F M G+ PD A L ++S C+ + ++ LGK
Sbjct: 363 RDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIM 422
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H Y ++ +++ +L++MY + AM +F M K++V WN +I +G
Sbjct: 423 HCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDP 482
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
A+EMF +++ SG+ PD T GL SAC+ +++G G + + G D+
Sbjct: 483 HLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKS-GFESDIHVKVA 541
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
++D+ + G L L D V W ++
Sbjct: 542 LMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIA 576
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 124/238 (52%), Gaps = 6/238 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V++ VSW ++++ +V+ G + E ++L +M V + +V+ L + M DL G
Sbjct: 259 MGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKG 318
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ ++Y + + + ++ MYAKCG L+ A ++F + +++V+W+ + AL
Sbjct: 319 KEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVET 378
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR--YYFGLMSSTFGISPDV 179
G +E + +F+ M+ GL PD+ + L+S C+ + +G+ + + + + + D+
Sbjct: 379 GYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKAD---MESDI 435
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ +V + R AM+L ++ +K D VVW L+ +G+ + ++ +L
Sbjct: 436 SMVTTLVSMYIRFELFTYAMTLFNRMQIK-DIVVWNTLINGFTKYGDPHLALEMFNRL 492
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 35/263 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPVK+ V WN++IS Q EA+E+F RM + G D +++++ + S +GD+
Sbjct: 160 MPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCC 219
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H Y+ +I V+ NSL++MY KCG + +A +F M ++ VSW ++ +
Sbjct: 220 KSIHGYVVRRSICGVVS--NSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKN 277
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF------GLMSSTFGI 175
G E +++ KMR + +++ L + +E G+ + GLMS
Sbjct: 278 GCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVA 337
Query: 176 SPDVAHYA----------CMVDLLGRG--------------GFLGEAMSLIQKLP---MK 208
+P V YA + L GR G+ E +S+ Q + +K
Sbjct: 338 TPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLK 397
Query: 209 PDAVVWGALLGACKTFGNLEMGK 231
PD + L+ C N+ +GK
Sbjct: 398 PDKAILSILVSGCTEISNIGLGK 420
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 111/241 (46%), Gaps = 10/241 (4%)
Query: 1 MMPVKNA--VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL 58
+ +KN + +NS I + + +A+ L+ + G+ PD T +L +C+ D
Sbjct: 56 FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
G + I N + V + SL++M+ K G L A ++F MP K+ V WN +I L
Sbjct: 116 HEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGL 175
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG--LMSSTFGIS 176
+ + EA+EMF +M+ G D+++ L A S G V + G + S G+
Sbjct: 176 SQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICGVV 235
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
+ ++D+ + G + A + ++ ++ D V W ++ G G Q+L +
Sbjct: 236 SN-----SLIDMYCKCGDVHSAQRVFDRMGVRDD-VSWATMMAGYVKNGCYFEGLQLLHK 289
Query: 237 L 237
+
Sbjct: 290 M 290
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 168/277 (60%), Gaps = 2/277 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ +SW S+I+ + + EA++LF RM ++ + P+ ATL ++LS+C+ +G L +G++
Sbjct: 281 KSVLSWTSMIAGYAHSRRPKEALDLFRRMVMTEIKPNRATLATVLSACADLGSLCIGEEI 340
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
Y +N + + SL++MY+KCG + A ++F + K++ W+ +I + +HG G
Sbjct: 341 EQYAFENGFETDLQVQTSLVHMYSKCGNINKAREVFERVENKDLTLWSSMINSYGIHGMG 400
Query: 125 KEAIEMFEKMR-ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
EAI +FEKM A + PD I +T LL ACSHSGL+E G YF M + FGI+P HY
Sbjct: 401 NEAISLFEKMTTAERIKPDAIVYTSLLFACSHSGLIEDGLKYFKSMQTDFGITPTKEHYT 460
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
C+VDLL R G L A+ I+ +P A LL AC+ GN+E+G+ + +LL++
Sbjct: 461 CLVDLLARVGQLDLALDTIEAMPTDVQAEALSPLLSACRIHGNIELGELVAAKLLDVSPK 520
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSG-IKKC 279
S YV ++N+Y+ +W + +R +++ G +K+C
Sbjct: 521 SSSSYVGVANLYNSVGKWKEANTMRNMIDGKGMVKEC 557
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 41/296 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD---- 57
MP ++ VSWNS+IS + E +A+ L M V G P ++T VSILS S +
Sbjct: 71 MPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGYSSNLNSFEF 130
Query: 58 LALGKKAHDYICDNNIT-VSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
L G H ++ + V+L NSLM MYA+ G + A +F M +K +VSW I+G
Sbjct: 131 LWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFMDEKTIVSWTTIMG 190
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC-----------SHSGLVEMGRY- 164
GS EA+++F +M+ + D I F L+S C HS +++ G +
Sbjct: 191 GYVKVGSSVEAVKLFNEMQHQNIGLDFIVFVNLVSGCIQLREQLLASSVHSLVLKCGCHE 250
Query: 165 ---YFGLMSSTFGISPDVAHYACMVDLLGRGGFLG---------------EAMSLIQKLP 206
L+ + + ++ + DL+ R L EA+ L +++
Sbjct: 251 EDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEALDLFRRMV 310
Query: 207 M---KPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLS--NMYSE 257
M KP+ +L AC G+L +G++I + E G +++ L V S +MYS+
Sbjct: 311 MTEIKPNRATLATVLSACADLGSLCIGEEIEQYAFENG-FETDLQVQTSLVHMYSK 365
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 34/271 (12%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M K VSW +I+ +V+ G EA++LF M + D V+++S C + + L
Sbjct: 176 FMDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFVNLVSGCIQLREQLL 235
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
H + ++ N L+ MYA+CG L +A IF + +K+V+SW +I A
Sbjct: 236 ASSVHSLVLKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAH 295
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLV----EMGRYYF---------- 166
KEA+++F +M + + P+ T +LSAC+ G + E+ +Y F
Sbjct: 296 SRRPKEALDLFRRMVMTEIKPNRATLATVLSACADLGSLCIGEEIEQYAFENGFETDLQV 355
Query: 167 -----------GLMSSTFGI-----SPDVAHYACMVDLLGRGGFLGEAMSLIQKLP---- 206
G ++ + + D+ ++ M++ G G EA+SL +K+
Sbjct: 356 QTSLVHMYSKCGNINKAREVFERVENKDLTLWSSMINSYGIHGMGNEAISLFEKMTTAER 415
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+KPDA+V+ +LL AC G +E G + K +
Sbjct: 416 IKPDAIVYTSLLFACSHSGLIEDGLKYFKSM 446
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 36 SGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQT 95
S V + T + SC+++ + G H ++ + SL++MY+KC +++
Sbjct: 4 SSVHGNTFTYPLLFKSCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIES 63
Query: 96 AMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
A +F MP+++VVSWN +I A ++A+ + ++M G P TF +LS S
Sbjct: 64 ARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGYS 122
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 170/285 (59%), Gaps = 2/285 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+PV+N WNS+I+ +VQ G +A+E F M V G PD T+VS+LS+C+ +GDL G
Sbjct: 238 IPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAG 297
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H I I V+ + + L++MYAKCG L A +F ++NV WN +I A++
Sbjct: 298 KQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVN 357
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E +E ++M+ S + D +TF +LSAC+H GL+ M +GI + H
Sbjct: 358 GQCNEVLEYLDRMQESNIRLDAVTFITVLSACAHGGLMSEALEVISKMEE-YGIEMGIRH 416
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL-LEL 240
Y CMVDLLGR G L EA LI+++PMKP+ V GA++GAC +++M +Q++K + +
Sbjct: 417 YGCMVDLLGRAGKLKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKMAEQVMKMIGADS 476
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI 285
+ VLLSN+Y+ S++W+ + IR M D G +K SSI
Sbjct: 477 AACVNSHNVLLSNIYAASEKWEKAEMIRSSMVDGGSEKIPGYSSI 521
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 116/273 (42%), Gaps = 39/273 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K VSW+ +I + G A + F + V + D ++ + G++
Sbjct: 143 MPGKTRVSWSQMIGGFARNGDTLTARKFFDK--VPYELKDVVIWTVMVDGYAKKGEMEDA 200
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ + + + N V +S++ Y K G + A IF +P +N+ WN +I +
Sbjct: 201 REVFELMPERNYFV----WSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQN 256
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF------GLMSSTFGI 175
G G++A+E F +M G PDE T +LSAC+ G ++ G+ G+ + F +
Sbjct: 257 GCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVL 316
Query: 176 SPDVAHYACMVDLLG----------RGGFLGEAM-----------------SLIQKLPMK 208
S + YA DL+ R F AM +Q+ ++
Sbjct: 317 SGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIR 376
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
DAV + +L AC G + +++ ++ E G
Sbjct: 377 LDAVTFITVLSACAHGGLMSEALEVISKMEEYG 409
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF 100
D + +L +C L K H V V + +++ YAKCG + A +F
Sbjct: 50 DPTVIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVF 109
Query: 101 FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE 160
MP++NVV+WN +IG +G K A+ FE+M ++++ ++ + +G
Sbjct: 110 DLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEMPGK----TRVSWSQMIGGFARNGDTL 165
Query: 161 MGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL-G 219
R +F + DV + MVD + G + +A + + +P + + VW +++ G
Sbjct: 166 TARKFFDKVPYEL---KDVVIWTVMVDGYAKKGEMEDAREVFELMPER-NYFVWSSMVCG 221
Query: 220 ACKTFGNLEMGKQILKQL 237
CK G++ + I +++
Sbjct: 222 YCKK-GDVMEAEAIFRRI 238
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 168/300 (56%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ +SW++IIS + Q EA M G P+ L S+LS C M L G
Sbjct: 414 MTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPG 473
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H Y + + ++L++MY++ G LQ A IF + ++VSW +I A H
Sbjct: 474 KQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEH 533
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EAI +FE + + GL PD +TF G+L+AC+H+GLV++G YY+ LM++ + I+P H
Sbjct: 534 GYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEH 593
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C++DLL R G L EA +++ +P D VVW LL AC+ G+L+ +Q+L L
Sbjct: 594 YGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLH 653
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+G ++ L+N+YS S R ++ +RK+M G+ K S I + F+ ++H
Sbjct: 654 PNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSNDQLNTFVAGVQSH 713
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 2/240 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M + VSW ++I +VQ G A++ F RM S V P+ T S++S+C+++ G
Sbjct: 313 MSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWG 372
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + + ++++ NS++ +Y+KCG LQ A +F GM +K+++SW+ II
Sbjct: 373 EQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQG 432
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
KEA M G P+E +LS C L+E G+ + G+ +
Sbjct: 433 SHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAY-ALCIGLDHETMV 491
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++ ++ + R G L EA + + D V W A++ G + + + + +G
Sbjct: 492 HSALISMYSRSGNLQEASKIFDSIK-NNDIVSWTAMINGYAEHGYSQEAISLFENISSVG 550
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 131/309 (42%), Gaps = 34/309 (11%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N VSW ++I V G + + F M S V D+ T L + + G L G
Sbjct: 212 MTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYG 271
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + + N+L MY+KC M +F M +VVSW +I
Sbjct: 272 KAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQM 331
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-------------- 167
G + A++ F++MR S + P+E TF ++SAC++ + + G G
Sbjct: 332 GDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVS 391
Query: 168 ----LMSSTFGI------------SPDVAHYACMVDLLGRGGFLGEA---MSLIQKLPMK 208
+ S G+ D+ ++ ++ + +G EA +S + + K
Sbjct: 392 NSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPK 451
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKI 267
P+ ++L C + LE GKQ+ L +G +++ ++ L +MYS S + KI
Sbjct: 452 PNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKI 511
Query: 268 RKIMNDSGI 276
+ ++ I
Sbjct: 512 FDSIKNNDI 520
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 34/278 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLAL 60
M ++ +SW ++I+ +V EA+ LF M V SG+ D + L +C+ ++
Sbjct: 110 MSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACALGMNVYF 169
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+ H + + + SV + ++L++MY K G + +F M +NVVSW +I L
Sbjct: 170 GELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVH 229
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY---------------- 164
G + + F +M S + D TF L A + SGL+ G+
Sbjct: 230 AGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYV 289
Query: 165 --YFGLMSST----------FG--ISPDVAHYACMVDL---LGRGGFLGEAMSLIQKLPM 207
G M S FG +PDV + ++ +G +A ++K +
Sbjct: 290 VNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDV 349
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
P+ + +++ AC + G+QI L LG D+
Sbjct: 350 SPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDA 387
>Medtr2g026210.1 | PPR containing plant-like protein | HC |
chr2:9478558-9480181 | 20130731
Length = 467
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 170/308 (55%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K++ +WN++I+ +VQ+G +E F M + + PD T S+ +C+ + L G++A
Sbjct: 118 KDSFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFASVFRACATLALLEPGRQA 177
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + I +V + ++L++MY KC + +F +N ++W +I HG
Sbjct: 178 HGVMLKCQIGDNVVVNSALIDMYFKCSCICDGRLLFDKCLSRNTITWTTLISGYGKHGQV 237
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
E ++ F +M + P+ +TF +L ACSH GL++ YF M + + P HYA
Sbjct: 238 VEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDEAYKYFQSMIRDYEMVPHAKHYAA 297
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLLGR G L EA + K P K +V+WGALLGACK G+L++ K K+ E R +
Sbjct: 298 MVDLLGRSGKLKEAYEFVLKSPYKEHSVIWGALLGACKIHGDLDLLKIASKKYFEFERVN 357
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
+G YV+L+N Y+ S WDD++++R + +SG+ K S IE+ F DK H +
Sbjct: 358 TGKYVVLANAYASSGLWDDVEEVRASLRESGVTKEPGYSRIEVQKEVSFFFNGDKYHRQA 417
Query: 305 TSIYSMVD 312
+Y +V+
Sbjct: 418 DEVYWVVN 425
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 5/223 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN + + ++ G+ +A+ L R +G T +L C + G++
Sbjct: 20 KNTQNLDKVLQGLCVSGKLEDAIRLLYR---TGFPVHPRTYSLMLQECIFWKNYGRGRRI 76
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ + L L+ +YAK G L+TA +F + +K+ +WN +I G
Sbjct: 77 HAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNLVEKDSFAWNAMIAGYVQKGLE 136
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+ +E F +MR + L PD+ TF + AC+ L+E GR G+M I +V +
Sbjct: 137 EVGLETFYEMRQASLRPDQYTFASVFRACATLALLEPGRQAHGVMLKC-QIGDNVVVNSA 195
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNL 227
++D+ + + + L K + + + W L+ G +
Sbjct: 196 LIDMYFKCSCICDGRLLFDKC-LSRNTITWTTLISGYGKHGQV 237
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 165/283 (58%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+ + V+WN++IS Q Q E +F M VSG+ P+ T+ ++L +C +G + G++
Sbjct: 249 IPDVVAWNALISGFAQNHQFRETFTVFREMLVSGICPNQVTIAALLPACGSVGSVKWGRE 308
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H +IC +V + ++L++MY+KCG+L+ A ++F + KNV SWN +I G
Sbjct: 309 VHGFICRKGFDANVFIASALIDMYSKCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGM 368
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
A+E+F KM+ GL P+E+TF +LSACSHSG VE G F LM +G+ HYA
Sbjct: 369 VDSALELFTKMKEEGLQPNEVTFACILSACSHSGSVEKGLEIFTLMKECYGVEICKEHYA 428
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
C+VDLL R G + EA I+ +P++ + GA L CK G ++ K++ ++++ +
Sbjct: 429 CIVDLLCRSGKIVEAYEFIKAMPIQVTESIAGAFLNGCKIHGRKDLAKKMAEEIMRMQLN 488
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
SG +V LSN+Y+ W++ +RK+M + + K S +E
Sbjct: 489 GSGSFVTLSNIYAAEGDWEEAGNVRKVMKERNVNKWPGSSWLE 531
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 133/269 (49%), Gaps = 11/269 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N ++N +I V G A+ F M G++ + T ++ +C + D+ GK+ H
Sbjct: 80 NVFAFNWMILGMVYNGYFDNALFYFRLMRDIGLIGNKFTFGIVIKTCVGLMDMKKGKQVH 139
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
IC+ + V + N L++MY KCG++ A +F GM +++V SW +I G +
Sbjct: 140 GMICEMGLMNDVLIGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSMICGFCNTGRIE 199
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMS--STFGISPDVAHYA 183
EA+ +FE+M+ G P++ T+ +++ + G + FG M G PDV +
Sbjct: 200 EALVLFERMKMEGYEPNDFTWNAIIATYARLG---DSKKAFGFMERMQKEGFIPDVVAWN 256
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
++ + E ++ +++ + P+ V ALL AC + G+++ G+++ +
Sbjct: 257 ALISGFAQNHQFRETFTVFREMLVSGICPNQVTIAALLPACGSVGSVKWGREVHGFICRK 316
Query: 241 GRYDSGLYV--LLSNMYSESQRWDDMKKI 267
G +D+ +++ L +MYS+ D + +
Sbjct: 317 G-FDANVFIASALIDMYSKCGSLKDARNV 344
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 177/300 (59%), Gaps = 4/300 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N +SWN+++ + G + EA++ F M G +P+ +T +S+ S++ L G
Sbjct: 252 MPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISAASNIASLGFG 311
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H ++ + NSL++ YAKCG+++ ++ IF + ++NVVSWN +I A +
Sbjct: 312 RSFHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLLIFDKICKRNVVSWNAVICGYAHN 371
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF--GLMSSTFGISPDV 179
G G EAI +FE+M + G+ P++++ GLL AC+H+GLV+ G YF + S + P+
Sbjct: 372 GRGAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLYFNKARIESPNLLKPE- 430
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HYACMVDLL R G EA + I+++P P W A+LG C+ N+E+G+ K +L
Sbjct: 431 -HYACMVDLLARSGRFTEAQNFIRRMPFNPGIGFWKAILGGCQIHHNIELGELAAKNILA 489
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
L D YV++SN +S + RW D+ ++R + + G+K+ S IE+ G + F+ D+
Sbjct: 490 LDPDDVSSYVMMSNAHSAAGRWSDVARLRTEIQEKGMKRIPGSSWIEVKGKVHAFLKADE 549
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 13 IISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNN 72
II+ ++ +H +A+ LF RM S + P+ T ++L++ + +G + +GK+ H +
Sbjct: 131 IITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLNTSTRLGKVGVGKQIHGCAIKTS 190
Query: 73 ITVSVTLCNSLMNMYAK-------------------------------CGALQTAMDIFF 101
+ +V + ++L+++Y K G + A+ +F
Sbjct: 191 LCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIGGYLKSGRFEDALRVFN 250
Query: 102 GMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEM 161
MP++NV+SWN ++G + G +EA++ F M G P+E TF +SA S+ +
Sbjct: 251 EMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISAASNIASLGF 310
Query: 162 GRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
GR + G D + ++ + G + +++ + K+ K + V W A++
Sbjct: 311 GRSFHACAIKFLGKLNDFVGNS-LISFYAKCGSMKDSLLIFDKI-CKRNVVSWNAVI 365
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 188/319 (58%), Gaps = 1/319 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP KN SW ++I + + G +A+ +F +M + V PD T S L +C+ + L G
Sbjct: 270 MPKKNTYSWTALIGGYARNGMAHKALGVFRKMIMHRVRPDEFTFSSCLFACATIASLKHG 329
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF-FGMPQKNVVSWNVIIGALAL 120
K+ H ++ NNI + + +++++MYAKCG+++TA IF F ++VV WN +I ALA
Sbjct: 330 KQIHAFLLRNNIRPNPVVVSAVVDMYAKCGSMETARRIFNFTEHMQDVVLWNTMISALAH 389
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G GKEA+ M M SG+ P+ T +L+ACSHSGLV G +F M++ G+ PD+
Sbjct: 390 YGYGKEAVLMLNDMLKSGVKPNRNTLVAILNACSHSGLVCDGLQFFKSMTNDHGVIPDLE 449
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYA ++DLLGR G E+M + + KP V +LL C+ G++ +G+++ + L++
Sbjct: 450 HYAHLIDLLGRAGCFVESMKDLFMIDCKPGDHVLYSLLCVCRPNGSIGVGREVAEFLIKW 509
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ S Y LLS++Y+ W + + R IM++ +++ R+ S IEI+ + F V D
Sbjct: 510 QPHSSAAYGLLSSIYAALVTWGLVDEARHIMDERRLRQDRSTSWIEIENEVHAFTVSDGL 569
Query: 301 HEVSTSIYSMVDQLMDHLK 319
H + ++YS + L + ++
Sbjct: 570 HPLKETLYSALGHLNNQIE 588
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 132/308 (42%), Gaps = 34/308 (11%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ VSWN+++ + G+ +EA+ + M V + T S+L C + + L
Sbjct: 138 MPEKDCVSWNAMVVGYAHCGRFSEALRFYGWMRRVCVGYNEFTFASVLIVCVKLKEFELC 197
Query: 62 KKAHDYIC-------------------------------DNNITVSVTLCNSLMNMYAKC 90
++ H + D+ + +L++ YA C
Sbjct: 198 RQIHGQVVVVGFLSNVVVSSSIVDAYAKCGKMEDAMRLFDDMTVRDIPAWTTLVSGYALC 257
Query: 91 GALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
G + +A ++F MP+KN SW +IG A +G +A+ +F KM + PDE TF+ L
Sbjct: 258 GDMDSAAEMFSQMPKKNTYSWTALIGGYARNGMAHKALGVFRKMIMHRVRPDEFTFSSCL 317
Query: 151 SACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPD 210
AC+ ++ G+ + I P+ + +VD+ + G + A + D
Sbjct: 318 FACATIASLKHGKQIHAFLLRN-NIRPNPVVVSAVVDMYAKCGSMETARRIFNFTEHMQD 376
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRW-DDMKKIR 268
V+W ++ A +G + +L +L+ G + + V + N S S D ++ +
Sbjct: 377 VVLWNTMISALAHYGYGKEAVLMLNDMLKSGVKPNRNTLVAILNACSHSGLVCDGLQFFK 436
Query: 269 KIMNDSGI 276
+ ND G+
Sbjct: 437 SMTNDHGV 444
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 6/188 (3%)
Query: 56 GDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVII 115
GD +K D + N+ N++++ Y K G ++ A +F+ MP+K+ VSWN ++
Sbjct: 95 GDYVRARKVFDKMDVRNLYS----WNNMISGYVKLGMMKQARGVFYKMPEKDCVSWNAMV 150
Query: 116 GALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI 175
A G EA+ + MR + +E TF +L C E+ R G + G
Sbjct: 151 VGYAHCGRFSEALRFYGWMRRVCVGYNEFTFASVLIVCVKLKEFELCRQIHGQV-VVVGF 209
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
+V + +VD + G + +AM L + ++ D W L+ G+++ ++
Sbjct: 210 LSNVVVSSSIVDAYAKCGKMEDAMRLFDDMTVR-DIPAWTTLVSGYALCGDMDSAAEMFS 268
Query: 236 QLLELGRY 243
Q+ + Y
Sbjct: 269 QMPKKNTY 276
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 176/288 (61%), Gaps = 13/288 (4%)
Query: 8 VSWN-----SIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL---- 58
V WN ++++C+ Q G EA+E++ +M + + + +V +S+C+ + D+
Sbjct: 271 VPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMSN 330
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
+L + C+ VS N+L++M +KCG + A F M +++ +++ +I A
Sbjct: 331 SLTYNIEEGFCEKTHIVS----NALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAF 386
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
A HG ++AI++F KM+ GL P+++TF G+L+ACS SGL+E G +F +M+ +GI P
Sbjct: 387 AEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNACSTSGLIEEGCRFFQIMTEMYGIEPL 446
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
HY CMVDLLGR G L +A SLI++ DA WG+LL AC+ +GN+E+G+ + L
Sbjct: 447 PEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACRVYGNVELGEIAARHLF 506
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
E+ DSG YVLL+N Y+ + +W+ ++++K+M+ G+KK S I+
Sbjct: 507 EIDPTDSGNYVLLANTYASNDKWECAEEVKKLMSKKGMKKPSGYSWIQ 554
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 105/265 (39%), Gaps = 35/265 (13%)
Query: 6 NAVSWNSIISCHVQEGQH-AEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
N W S+I + H + F RM G++P T +L++C + GK+
Sbjct: 78 NCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTFSLVLNACGRVPAGFEGKQV 137
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + + + +L++MYAKCG + A D+F G+ ++VV+W +I A G
Sbjct: 138 HARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICGYAKAGRM 197
Query: 125 KEAIEMFEKMRASGLF---------------------------PDEITFTGLLSACSHSG 157
+A +F+ M F DE+T+ +++ G
Sbjct: 198 VDARFLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKDEVTWVAMIAGYGKLG 257
Query: 158 LVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGAL 217
V R F ++ + S A AC + G EA+ + +K+ V A+
Sbjct: 258 NVSEARRIFDEITVPWNPSTCAALLAC----YAQNGHAREAIEMYEKMRRAKIKVTDVAM 313
Query: 218 LG---ACKTFGNLEMGKQILKQLLE 239
+G AC ++ M + + E
Sbjct: 314 VGAISACAQLRDIRMSNSLTYNIEE 338
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 110/277 (39%), Gaps = 81/277 (29%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N+ +W ++++ + G AMEL+ M +G D T V++++ +G+++
Sbjct: 207 MGERNSFTWTTMVAGYANYGDMKAAMELYDVM--NG--KDEVTWVAMIAGYGKLGNVSEA 262
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ D I + + + C +L+ YA+ +
Sbjct: 263 RRIFDEI---TVPWNPSTCAALLACYAQ-------------------------------N 288
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSAC---------------------------- 153
G +EAIEM+EKMR + + ++ G +SAC
Sbjct: 289 GHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHIVS 348
Query: 154 -------SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP 206
S G +++ F +M + D+ Y+ M+ G +A+ L K+
Sbjct: 349 NALIHMQSKCGNIDLAWREFNIMRNR-----DLYTYSAMIAAFAEHGKSQDAIDLFLKMQ 403
Query: 207 ---MKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+KP+ V + +L AC T G +E G + + + E+
Sbjct: 404 QEGLKPNQVTFVGVLNACSTSGLIEEGCRFFQIMTEM 440
>Medtr3g408390.1 | PPR containing plant-like protein | HC |
chr3:1481664-1484476 | 20130731
Length = 392
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 177/293 (60%), Gaps = 21/293 (7%)
Query: 2 MPVKNAVSWNSIIS--CHVQEGQHAEAME---LFCRMCVSG---VMPDNATLVSILSSCS 53
MP +N V+WN++I+ C +++G A+ LF M + G V P++ T+V +LS+ S
Sbjct: 1 MPDRNVVTWNAMITGYCSLKDGNEKNAVNGLCLFKEMLMVGGSEVRPNDTTVVCLLSAAS 60
Query: 54 HMGDLALGKKAHDY----ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVV 109
+G + +G H + +C + V + L++MY+KCG L++A+ +F M +NV+
Sbjct: 61 QLGMVEIGVCLHGFAVKVLC--KVEDDVFIGTGLVDMYSKCGCLESALSVFRRMKWRNVL 118
Query: 110 SWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM 169
+W + LA+HG G+EA+++ +M + G+ P+E TFT LLSAC H+GLVE G F M
Sbjct: 119 TWTAMTTGLAIHGRGEEALKILYEMGSDGVKPNETTFTSLLSACCHAGLVEEGLQLFRDM 178
Query: 170 SSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEM 229
FG+ P + HY C+VDLLGR G L EA I ++P+ PD ++W +LL AC+ G++ M
Sbjct: 179 EGKFGVVPWIQHYGCVVDLLGRNGNLNEAYDFIMEMPISPDTLIWRSLLSACRIHGDVVM 238
Query: 230 GKQILKQLLELGR-------YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSG 275
G+++ + LL+ + S YV LSN+Y+ + RWD ++ +RK M G
Sbjct: 239 GEKVGRFLLKFKEKSSEELAHKSEDYVALSNVYASAGRWDVVEVVRKKMKVKG 291
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 177/290 (61%), Gaps = 9/290 (3%)
Query: 2 MPVK-NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+PV N + ++++C+ Q G EA+E++ +M + + + +V +S+C+ + D+ +
Sbjct: 269 IPVPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRM 328
Query: 61 GK----KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
+ C+ VS N+L++M +KCG + A F M +++ +++ +I
Sbjct: 329 SNLLTYDIEEGFCEKTHIVS----NALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIA 384
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
A A HG ++AI++F KM+ GL P+++TF G+L+ACS SGL+E G +F +M+ +GI
Sbjct: 385 AFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTSGLIEEGCRFFQIMTGVYGIE 444
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
P HY CMVDLLGR G L +A SLI++ DA WG+LL AC+ +GN+E+G+ +
Sbjct: 445 PLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACRVYGNVELGEIAARH 504
Query: 237 LLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
L E+ DSG YVLL+N Y+ + +W+ ++++K+M+ G+KK S I+
Sbjct: 505 LFEIDPTDSGNYVLLANTYASNDKWERAEEVKKLMSKKGMKKPSGYSWIQ 554
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 100/215 (46%), Gaps = 10/215 (4%)
Query: 6 NAVSWNSIISCHVQEGQH-AEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
N W S+I + H + F M G++P T S+L++C + + GK+
Sbjct: 78 NCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGILPSGFTFSSVLNACGRVPAVFEGKQV 137
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + + + +L++MYAKCG + A D+F GM ++VV+W +I A G
Sbjct: 138 HARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKAGRM 197
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+A +F+ M F T+T +++ ++ G ++ + +M+ ++ +
Sbjct: 198 VDARLLFDNMGERNSF----TWTTMVAGYANYGDMKAAMELYDVMNGKEEVT-----WVA 248
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
M+ G+ G + EA + ++P+ + ALL
Sbjct: 249 MIAGYGKLGNVSEARRIFDEIPVPLNPSTCAALLA 283
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 111/248 (44%), Gaps = 33/248 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N+ +W ++++ + G AMEL+ M +G + T V++++ +G+++
Sbjct: 207 MGERNSFTWTTMVAGYANYGDMKAAMELYDVM--NG--KEEVTWVAMIAGYGKLGNVSEA 262
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNV-IIGALAL 120
++ D I + ++ + C +L+ YA+ G + A++++ M + + +V ++GA++
Sbjct: 263 RRIFDEI---PVPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAIS- 318
Query: 121 HGSGKEAIEMFEKMRASGLF----------PDEITFTGLLSACSHSGLVEMGRYYFGLMS 170
A +R S L I L+ S G +++ F +M
Sbjct: 319 ------ACAQLRDIRMSNLLTYDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMR 372
Query: 171 STFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNL 227
+ D+ Y+ M+ G +A+ L K+ + P+ V + +L AC T G +
Sbjct: 373 NR-----DLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTSGLI 427
Query: 228 EMGKQILK 235
E G + +
Sbjct: 428 EEGCRFFQ 435
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 173/317 (54%), Gaps = 2/317 (0%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGV--MPDNATLVSILSSCSHMGDLALGKKAHD 66
+WN +I VQ Q A++L M G+ P+ TL SI+ S+ +L K+ H
Sbjct: 358 TWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYFSNLRGLKEVHG 417
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
Y + ++ + ++++ YAK G + A +F ++++ W II A A HG
Sbjct: 418 YAIRRSYDQNIYVATAIVDSYAKLGFIHLARRVFDQSQSRSLIIWTSIIYAYASHGDASL 477
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMV 186
A+ ++ +M G+ PD +T T +L+AC+HSGLV F M S GI P V HYACMV
Sbjct: 478 ALGLYNQMLDRGIQPDPVTLTSVLTACAHSGLVNEAWDVFNAMPSKHGIQPVVEHYACMV 537
Query: 187 DLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSG 246
+L R G L EA I K+P +P A VWGALL + ++E+GK L E+ +G
Sbjct: 538 GVLSRAGKLSEAEKFISKMPFEPTAKVWGALLNGASIYDDVEIGKFACDHLFEIEPEHTG 597
Query: 247 LYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTS 306
Y++++N+YS + RW++ +KIR+ M +G K R S IE G F+ D ++E+S
Sbjct: 598 NYIIMANLYSRAGRWEEARKIRERMEKTGSPKIRGSSWIETSGKLLGFIAKDMSNEMSDE 657
Query: 307 IYSMVDQLMDHLKSVGY 323
IY+++ L+ ++ GY
Sbjct: 658 IYALLKGLLGLMREEGY 674
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 115/243 (47%), Gaps = 13/243 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV---SGVMPDNATLVSILSSCSHMGDL 58
M ++ V+WN++I + Q G + E L+ M G++P+ T+ S++ +C DL
Sbjct: 216 MTERDIVTWNAMIGGYSQSGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACGQSKDL 275
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
+ G + H ++ D+ I V LCN+++ MYAKCG+L A ++F M +K+ VS+ II
Sbjct: 276 SFGMEVHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGY 335
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
++G EA+++ + + GL G++ +++ R G + P+
Sbjct: 336 MINGFVDEALDVLKGIENPGLSTWNDVIPGMVQNNQFERALDLVREMPGF---GLNLKPN 392
Query: 179 VAHYACMVDLLG-----RGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
V + ++ L RG L E + + V A++ + G + + +++
Sbjct: 393 VVTLSSIIPLFSYFSNLRG--LKEVHGYAIRRSYDQNIYVATAIVDSYAKLGFIHLARRV 450
Query: 234 LKQ 236
Q
Sbjct: 451 FDQ 453
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 10/242 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS---GVMPDNATLVSILSSCSHMGDL 58
+P KN+ SWNS+I + + +A+ LF S V PDN T+ SIL + + +
Sbjct: 110 IPHKNSFSWNSMIIAYTSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALSSSV 169
Query: 59 AL--GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
K+ H V + N+L+ Y +CG ++ A +F M ++++V+WN +IG
Sbjct: 170 CYKSAKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIG 229
Query: 117 ALALHGSGKEAIEMFEKM---RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTF 173
+ G +E ++ +M G+ P+ +T ++ AC S + G M
Sbjct: 230 GYSQSGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDD- 288
Query: 174 GISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
GI DV ++ + + G L A L ++ K D V + +++ G ++ +
Sbjct: 289 GIETDVFLCNAIIAMYAKCGSLNYARELFDEMGEK-DEVSYRSIISGYMINGFVDEALDV 347
Query: 234 LK 235
LK
Sbjct: 348 LK 349
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 5/204 (2%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF 100
D A S + C++ + GK+ H IT + L+ YAK ++ A ++F
Sbjct: 48 DIAAYGSAIQHCTNHRLIRQGKQLHARFFPFAITPDNFIATKLITFYAKSNLIRNARNVF 107
Query: 101 FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRAS---GLFPDEITFTGLLSACSHSG 157
+P KN SWN +I A +A+ +F +S + PD T T +L + S
Sbjct: 108 DKIPHKNSFSWNSMIIAYTSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALSS 167
Query: 158 LV-EMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGA 216
V + G DV +V R G + A + ++ + D V W A
Sbjct: 168 SVCYKSAKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTER-DIVTWNA 226
Query: 217 LLGACKTFGNLEMGKQILKQLLEL 240
++G G E K++ ++L L
Sbjct: 227 MIGGYSQSGFYEECKRLYLEMLGL 250
>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:44985847-44989750 | 20130731
Length = 912
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 176/301 (58%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +++++++ + + Q+G H A+++ MC G+ D +L S LS+ + +G + G
Sbjct: 481 MNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETG 540
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H Y + ++ NSL+++Y+KCG++ A F + + + SWN +I + +
Sbjct: 541 KQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWN 600
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G A+ F+ MR +G+ PD IT L+SACSH GL+E+G YF M + I+P + H
Sbjct: 601 GLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDH 660
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C+VDLLGRGG L EAM +I+K+ KPD+++ LL AC GN+ +G+ + ++ LEL
Sbjct: 661 YMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELD 720
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
D +Y+LL+N+Y + D +K R++M + G+++ +EI + F +K +
Sbjct: 721 PSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHHFSAGEKIN 780
Query: 302 E 302
E
Sbjct: 781 E 781
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 38/291 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSW +I+S H + H++A++LF M SG P+ TL S L SC +G+ G
Sbjct: 75 MPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERG 134
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK--NVVSWNVIIGALA 119
+ H + ++ + SL+ Y KCG + + +VVSW ++ +L
Sbjct: 135 MQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLV 194
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMG------ 162
+G EA E++ KM SG++P+E TF LL A S H+ L+ G
Sbjct: 195 ENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLV 254
Query: 163 -------------RYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK- 208
R + S DV + ++ + + EA+S+ + + +
Sbjct: 255 LKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSG 314
Query: 209 --PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMY 255
P+ + +LL A + +L++G+Q +++ +G D LY+ L +MY
Sbjct: 315 LLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDD-LYIGNALVDMY 364
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 107/214 (50%), Gaps = 1/214 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ VSW +++S V+ G+ EA E++ +M SGV P+ T V +L + S L+ GK H
Sbjct: 182 DVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLH 241
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
++ +++ L ++++MY+KC + A+ + P+ +V W +I + +
Sbjct: 242 AHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVR 301
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EAI +F M SGL P+ T++ LL+A S +++G + + G+ D+ +
Sbjct: 302 EAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRV-IIVGLEDDLYIGNAL 360
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
VD+ + + + + P+ + W +L+
Sbjct: 361 VDMYMKCSHITTNAVKVFREITSPNVMCWTSLIA 394
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 120/235 (51%), Gaps = 4/235 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+ P + W ++IS Q Q EA+ +F M +SG++P+N T S+L++ S + L L
Sbjct: 278 LTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDL 337
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQT-AMDIFFGMPQKNVVSWNVIIGALA 119
G++ H + + + + N+L++MY KC + T A+ +F + NV+ W +I A
Sbjct: 338 GEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFA 397
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+++ ++F +M+A+G+ P+ T + +L ACS + + G + T + D+
Sbjct: 398 -EKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKT-KVDIDI 455
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
A +VD G + EA S+I + ++ D++ + L G+ M ++L
Sbjct: 456 AVANALVDTYAGVGMIDEAWSVIGTMNLR-DSITYTCLAARLNQKGHHGMALKVL 509
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 110/263 (41%), Gaps = 37/263 (14%)
Query: 44 TLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM 103
T + +LS C+ L G H I + + L N+L+++YAK + A +F M
Sbjct: 17 TCLRVLSFCNS-NSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEM 75
Query: 104 PQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG- 162
P ++VVSW I+ + +A+++F+ M SG +P+E T + L +C G E G
Sbjct: 76 PNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGM 135
Query: 163 -----RYYFGL-MSSTFGIS-------------------------PDVAHYACMVDLLGR 191
GL M+ G S DV + M+ L
Sbjct: 136 QIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVE 195
Query: 192 GGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGL 247
G GEA + K+ + P+ + LLGA +F L GK + L+ G + L
Sbjct: 196 NGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVL 255
Query: 248 YVLLSNMYSESQRWDDMKKIRKI 270
+ +MYS+ +R D K+ +
Sbjct: 256 KTAVVDMYSKCRRMVDAIKVSNL 278
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 106/258 (41%), Gaps = 34/258 (13%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N + W S+I+ E + ++ +LF M +GV P++ T+ +IL +CS L H
Sbjct: 385 NVMCWTSLIA-GFAEKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLH 443
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+I + + + + N+L++ YA G + A + M ++ +++ + L G
Sbjct: 444 GHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHG 503
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY-------------------YF 166
A+++ M G+ DE + LSA + G +E G+
Sbjct: 504 MALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLV 563
Query: 167 GLMSSTFGI-----------SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM---KPDAV 212
L S I PD + ++ G + A+S + + KPD++
Sbjct: 564 HLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSI 623
Query: 213 VWGALLGACKTFGNLEMG 230
+L+ AC G LE+G
Sbjct: 624 TLLSLISACSHGGLLELG 641
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 184/316 (58%), Gaps = 1/316 (0%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V+W S I VQ G+ A+ +F M + P++ TL SIL +CS + L G++ H
Sbjct: 270 VTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAV 329
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + + +L+++Y KCG ++ A +F + + ++VS N +I A A +G G EA
Sbjct: 330 TVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEA 389
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+E+FE+++ GL P+ +TF +L AC+++GLVE G F L+ + I HY CM+D
Sbjct: 390 LELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMID 449
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
LLGR EA LI++ PD + W LL ACK G +EM ++ +K++L+ D G
Sbjct: 450 LLGRAKRFEEATMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGT 508
Query: 248 YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSI 307
++LL+N+Y+ + +WD++ +++ D +KK A+S ++ID + FM D +H + I
Sbjct: 509 HILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEI 568
Query: 308 YSMVDQLMDHLKSVGY 323
M+ +L++ + ++GY
Sbjct: 569 SEMLHELIEKVITLGY 584
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 3/239 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ V+WNS+IS HV G+ EA+EL+ M GV+PD T +I + S MG G
Sbjct: 61 MPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREG 120
Query: 62 KKAHDYICDNNITVSV-TLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+KAH VS + +++MYAK G ++ A +F + K+VV + +I
Sbjct: 121 QKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQ 180
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG EA+E+FE M S + P+E T +L +C + G + G+ GL+ +G+ VA
Sbjct: 181 HGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVK-YGLESVVA 239
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++ + + + +++ + L V W + + G E+ + ++++
Sbjct: 240 SQTSLLTMYSKCNMVEDSIKVFNSLAY-ASHVTWTSFIVGLVQNGREEVALSMFREMMR 297
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 136/298 (45%), Gaps = 43/298 (14%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V + ++I + Q G EA+E+F M S + P+ TL S+L SC ++GDL GK
Sbjct: 166 KDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLI 225
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + V SL+ MY+KC ++ ++ +F + + V+W I L +G
Sbjct: 226 HGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGRE 285
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+ A+ MF +M + P+ T + +L ACS ++E G + + G+ + A
Sbjct: 286 EVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAV-TVKLGVDGNKFVDAA 344
Query: 185 MVDLLGR-------------------------------GGFLGEAMSL---IQKLPMKPD 210
++ L G+ GF EA+ L ++KL ++P+
Sbjct: 345 LIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPN 404
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQL-----LELGRYDSGLYVLLSNMYSESQRWDD 263
V + ++L AC G +E G QI + +EL R Y + ++ ++R+++
Sbjct: 405 VVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTR---DHYTCMIDLLGRAKRFEE 459
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 35/222 (15%)
Query: 46 VSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ 105
S+++ C++ L K H +I + S + L++ Y KC + A +F MP
Sbjct: 5 TSLIAQCTNKKSLTTLKSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMPN 63
Query: 106 KNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY 165
+++V+WN +I + G KEAIE++ M G+ PD TF+ + A S G+ G+
Sbjct: 64 RHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKA 123
Query: 166 FGL-------------------MSSTFG------------ISPDVAHYACMVDLLGRGGF 194
GL M + FG + DV + ++ + G
Sbjct: 124 HGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGL 183
Query: 195 LGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQI 233
GEA+ + + + +KP+ ++L +C G+L GK I
Sbjct: 184 DGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLI 225
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 169/287 (58%), Gaps = 4/287 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ K+ +SWNSIIS V G + +E F + + + P+ +L LS CS D+ G
Sbjct: 447 LAYKSLISWNSIISGFVLNGYPMQGLEKFSALLNTHLKPNAYSLSLALSICSCTPDMDHG 506
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H YI + ++L N+L+ MY+KCG L ++ +F M +++ ++WN II A + H
Sbjct: 507 KQVHGYILRHGFDSEISLGNALVTMYSKCGFLDRSLSVFNEMVERDTITWNAIISAYSQH 566
Query: 122 GSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G GKEA+ FE M+ S G+ PD TFT +LSACSHSGLV+ F +M + +G P V
Sbjct: 567 GQGKEAVHCFEAMQISPGIKPDHATFTAVLSACSHSGLVDDATRIFDIMVNIYGFVPSVD 626
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
H++C+VDLLGR G+L EA ++ + +L AC GNL +G+++ + LLE
Sbjct: 627 HFSCIVDLLGRSGYLDEAERVVTDGYFGAHPNMCWSLFSACAVHGNLTLGRKVARLLLER 686
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK---CRAISS 284
+ + +YVLL+N+ +E+ +W++ K+R ++ G K C IS+
Sbjct: 687 EQNNPSVYVLLANICAEAGQWEEAAKLRDMVKQFGTTKQPGCSWIST 733
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 134/276 (48%), Gaps = 14/276 (5%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M ++ VSWN ++S QE + +A+ + +M G+ PD T S+LS+ L +
Sbjct: 349 MEESRDLVSWNVMVSMFFQENINEDAILTYIKMRREGIEPDAFTYGSLLSASD---SLQM 405
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H +C N + V + N+L++ Y++ G ++ A IF + K+++SWN II L
Sbjct: 406 VEMIHSVLCKNGLN-KVEVLNALISSYSRNGQIKRAFQIFSDLAYKSLISWNSIISGFVL 464
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G + +E F + + L P+ + + LS CS + ++ G+ G + G +++
Sbjct: 465 NGYPMQGLEKFSALLNTHLKPNAYSLSLALSICSCTPDMDHGKQVHGYILR-HGFDSEIS 523
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK----- 235
+V + + GFL ++S+ ++ ++ D + W A++ A G GK+ +
Sbjct: 524 LGNALVTMYSKCGFLDRSLSVFNEM-VERDTITWNAIISAYSQHGQ---GKEAVHCFEAM 579
Query: 236 QLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIM 271
Q+ + D + + + S S DD +I IM
Sbjct: 580 QISPGIKPDHATFTAVLSACSHSGLVDDATRIFDIM 615
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 131/320 (40%), Gaps = 44/320 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP WN+II+ G A L M V DN T ++LS C L G
Sbjct: 147 MPKCYVAVWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTFATMLSLCPLSEGLDYG 206
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ--KNVVSWNVIIGALA 119
+ H + + ++ NSL+ MY CG + +F M +N V++N +I
Sbjct: 207 RHVHSVVVKSGFLDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGGVRNHVTYNAMIDGFV 266
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA-------CSHSGL-VEMG--------- 162
++A MF M + E+TF +LS+ C GL ++MG
Sbjct: 267 SVERFEDAFLMFRDMHRGSVCLSEVTFVSVLSSCCSLRVGCQAQGLAIKMGFDCGYTAVN 326
Query: 163 ------RYYFGLMS---STFGI---SPDVAHYACMVDLLGRGGFLGEAMSLIQKLP---M 207
+FG ++ S F I S D+ + MV + + +A+ K+ +
Sbjct: 327 NATMTMYSFFGKVNEARSVFEIMEESRDLVSWNVMVSMFFQENINEDAILTYIKMRREGI 386
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL--YVLLSNMYSESQRWDDMK 265
+PDA +G+LL A + +EM +L + +GL +L+ + S R +K
Sbjct: 387 EPDAFTYGSLLSASDSLQMVEMIHSVLCK--------NGLNKVEVLNALISSYSRNGQIK 438
Query: 266 KIRKIMNDSGIKKCRAISSI 285
+ +I +D K + +SI
Sbjct: 439 RAFQIFSDLAYKSLISWNSI 458
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 178/329 (54%), Gaps = 12/329 (3%)
Query: 6 NAVSWNSIISCHVQEGQHA-----------EAMELFCRMCVSGVMPDNATLVSILSSCSH 54
N V+WN++I+ H Q + + EA+ LF ++ SG+ PD T S+LS CS
Sbjct: 349 NLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSK 408
Query: 55 MGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVI 114
M L G++ H V + +S++NMY KCG+++ A +F M + ++ W +
Sbjct: 409 MMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILWTTM 468
Query: 115 IGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
I A HG K+A+ +FE M+ G+ P+ +TF G+LSAC +G+V YF +M +
Sbjct: 469 ITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYK 528
Query: 175 ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
I P + HY C+VD+L R G + EA LI+K+ K +W L+ C + GNLE+G
Sbjct: 529 IKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQGNLELGCDAA 588
Query: 235 KQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQF 294
++LL L D+ Y LL N Y + R+DD+ ++ IM + I + + S I I Y F
Sbjct: 589 EKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENIMREEKIGELKDWSWISIKDRVYSF 648
Query: 295 MVDDKNHEVSTSIYSMVDQLMDHLKSVGY 323
+DK ++ +SI ++ L K++GY
Sbjct: 649 QTNDKA-DIESSIGKSLEDLHIKAKNLGY 676
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 15/227 (6%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVS--GVMPDNATLVSILSSCSHMGDLALGK 62
K+ +SW + IS ++G+ + + +F M + V P+ TL S LS C + L LG
Sbjct: 245 KDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGI 304
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA----- 117
+ H ++ + NSL+ +Y KCG + A +F GM N+V+WN +I
Sbjct: 305 QVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMM 364
Query: 118 ------LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS 171
L+ + G EA+ +F K+ SG+ PD TF+ +LS CS +E G
Sbjct: 365 ELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIK 424
Query: 172 TFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
T G DV + M+++ + G + A + ++ ++ ++W ++
Sbjct: 425 T-GFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRT-MILWTTMI 469
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 16/263 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLAL 60
M +NAV+W +++ +VQ A+ LF M + S P N TL L++C+ + L L
Sbjct: 139 MNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKL 198
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGA-LQTAMDIFFGMPQKNVVSWNVIIGALA 119
G++ H YI ++ ++ N+L ++Y KCG L+ + F + +K+V+SW I A
Sbjct: 199 GEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACG 258
Query: 120 LHGSGKEAIEMFEKM--RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
G + + +F +M + P+E T T LS C +E+G L + G
Sbjct: 259 EKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHAL-CTKLGYES 317
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++ ++ L + G + EA L + + + V W A++ +E+ K
Sbjct: 318 NLRVRNSLLYLYLKCGCIVEAQRLFKGMN-DVNLVTWNAMIAGHAQM--MELSKD----- 369
Query: 238 LELGRYDSGLYVLLSNMYSESQR 260
L Y G+ L N++S+ R
Sbjct: 370 -NLSAYQKGIEAL--NLFSKLNR 389
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 98/227 (43%), Gaps = 4/227 (1%)
Query: 14 ISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNI 73
IS H+ ++ + E F S D++ +L C + + H +I
Sbjct: 50 ISTHLDPNRNLKFQEAFSLAKESNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGS 109
Query: 74 TVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEK 133
L + L+ +YAKCG ++ A +F M ++N V+W ++ + K AI +FE+
Sbjct: 110 HEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEE 169
Query: 134 MRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGR- 191
M S +P T L+AC+ +++G + + + D + + L +
Sbjct: 170 MLLHSECYPSNYTLAIALNACTSLHSLKLGEQLHAYIIK-YHVDFDTSIGNALCSLYTKC 228
Query: 192 GGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
GG L ++ +++ K D + W A + AC G G ++ ++L
Sbjct: 229 GGKLEVGLTAFRRIKEK-DVISWTAAISACGEKGEAMKGVRVFVEML 274
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 182/316 (57%), Gaps = 1/316 (0%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V+W S I VQ G+ A+ +F M + P++ T SIL +CS + L G++ H
Sbjct: 270 VTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAV 329
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + + +L+++Y KCG ++ A +F + + +VVS N +I A A +G G EA
Sbjct: 330 TVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEA 389
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+E+FE+M+ G P+ +TF +L AC+++GLVE G F L+ + I HY CM+D
Sbjct: 390 LELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMID 449
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
LLGR EA LI++ PD + W LL ACK G +EM ++ +K++L+ D G
Sbjct: 450 LLGRAKRFEEAAMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGT 508
Query: 248 YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSI 307
++LL+N+Y+ + +WD++ +++ D +KK A+S ++ID + FM D +H + I
Sbjct: 509 HILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEI 568
Query: 308 YSMVDQLMDHLKSVGY 323
M+ +L++ + ++GY
Sbjct: 569 SEMLHELIEKVITLGY 584
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 41/297 (13%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V + ++I + Q G EA+E+F M S + P+ TL S+L SC ++GDL GK
Sbjct: 166 KDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLI 225
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + + V SL+ MY+KC ++ ++ +F + + V+W I L +G
Sbjct: 226 HGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGRE 285
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG---------------RYYFGLM 169
+ A+ MF +M + P+ TF+ +L ACS ++E G +Y +
Sbjct: 286 EIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAAL 345
Query: 170 SSTFG---------------ISPDVAHYACMVDLLGRGGFLGEAMSLIQ---KLPMKPDA 211
+G DV M+ + GF EA+ L + KL KP+
Sbjct: 346 IHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNV 405
Query: 212 VVWGALLGACKTFGNLEMGKQILKQL-----LELGRYDSGLYVLLSNMYSESQRWDD 263
V + ++L AC G +E G QI + +EL R Y + ++ ++R+++
Sbjct: 406 VTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTR---DHYTCMIDLLGRAKRFEE 459
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 37/283 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ V+WNS+IS HV G+ EA+EL+ M GV+PD T +I + S MG G
Sbjct: 61 MPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREG 120
Query: 62 KKAHDYICDNNITVSV-TLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+KAH VS + +++MYAK G ++ A +F + K+VV + +I
Sbjct: 121 QKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQ 180
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G EA+E+FE M S + P+E T +L +C + G + G+ GL+ + G+ VA
Sbjct: 181 RGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKS-GLESVVA 239
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLP---------------------------------- 206
++ + + + +++ + L
Sbjct: 240 SQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCS 299
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV 249
+ P+ + ++L AC + LE G+QI ++LG D YV
Sbjct: 300 ISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLG-VDGNKYV 341
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 35/222 (15%)
Query: 46 VSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ 105
S+++ ++ L K H +I + S + L++ Y KC + A +F MP
Sbjct: 5 TSLIAQFTNKKSLTTLKSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMPN 63
Query: 106 KNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY 165
+++V+WN +I + G KEAIE+++ M G+ PD TF+ + A S G+ G+
Sbjct: 64 RHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKA 123
Query: 166 FGL-------------------MSSTFG------------ISPDVAHYACMVDLLGRGGF 194
GL M + FG + DV + ++ + G
Sbjct: 124 HGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGL 183
Query: 195 LGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQI 233
GEA+ + + + +KP+ ++L +C G+L GK I
Sbjct: 184 DGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLI 225
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ VS N++I + Q G EA+ELF RM G P+ T +SIL +C++ G + G +
Sbjct: 369 DVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIF 428
Query: 66 DYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
I +N+ I ++ ++++ + + A + +V+ W ++ A +HG
Sbjct: 429 SLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEV 488
Query: 125 KEAIEMFEKM 134
+ A + +KM
Sbjct: 489 EMAEKFMKKM 498
>Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20800229-20798334 | 20130731
Length = 403
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 179/317 (56%), Gaps = 31/317 (9%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSW++II+ +VQ G E +E F M S V P+ T+VS L+
Sbjct: 42 MHERDVVSWSTIIAGYVQVGCFMEDLEFFHNMLQSEVKPNEYTMVSALA----------- 90
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALAL 120
I ++ L SL++MYAKCG + +A +F ++ V WN +IG A+
Sbjct: 91 -----------IKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAM 139
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG +EAI +FE+M+ + P+++TF LL+ACSH +++ G+ YF LMSS +GI+P++
Sbjct: 140 HGKPEEAISLFEQMKVERVSPNKVTFIALLNACSHGYMIKEGKSYFELMSSDYGINPEIE 199
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVDLL R L EA +I +PM PD +WGALL AC+ + ++E G +I + + E+
Sbjct: 200 HYGCMVDLLSRSELLKEAEEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEI 259
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMK------KIRKIMN--DSGIKKCRAISSIEIDGCCY 292
G VLL N+YS S RW++ + +IR+I + + I+K + + G
Sbjct: 260 DPNHIGCNVLLGNIYSTSGRWNEARILRERNEIREIYSFLEEMIRKLKIAGYVPELGEVL 319
Query: 293 QFMVDDKNHEVSTSIYS 309
D+++ E + S++S
Sbjct: 320 LDFDDEEDKETTLSVHS 336
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 23/170 (13%)
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ D+ I + N+++ +Y G + A ++F M +++VVSW+ II G E
Sbjct: 7 VFDSAIDRDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQVGCFMED 66
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+E F M S + P+E T M S I + A ++D
Sbjct: 67 LEFFHNMLQSEVKPNEYT-----------------------MVSALAIKMNDRLLASLID 103
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ + G + A S+ + +K W A++G G E + +Q+
Sbjct: 104 MYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAISLFEQM 153
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 166/291 (57%), Gaps = 8/291 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K +SWNSI+ Q +EA++ F M V D + S++S+C+ L LG
Sbjct: 387 MPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELG 446
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ + +C SL++ Y KCG ++ +F GM + + VSWN ++ A +
Sbjct: 447 EQLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATN 506
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G EA+ +F +M SG+ P ITFTG+LSAC H GLVE GR F M + I+P + H
Sbjct: 507 GYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEH 566
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+CMVDL R G GEAM LI+++P + DA +W ++L C + GN +GK +++++L
Sbjct: 567 YSCMVDLFARVGCFGEAMYLIEEMPFQADANMWLSVLRGCVSHGNKTIGKMAAEKIIQLD 626
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCY 292
+SG Y+ LSN+ + S+ W+ ++R++M + ++K I GC +
Sbjct: 627 PGNSGAYIQLSNILATSEDWEGSAEVRELMRNKNVQK--------IPGCSW 669
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 66/296 (22%)
Query: 7 AVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHD 66
+V WNSIIS +V G+ EA+ LF +M +GV D + + +ILS S + ++ L K+ HD
Sbjct: 260 SVLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLLNVELVKQMHD 319
Query: 67 YI----CDNNITVSVTLC---------------------------NSLMNMYAKCGALQT 95
+ ++I V+ TL N+++ +Y CG ++
Sbjct: 320 HAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRVED 379
Query: 96 AMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH 155
A ++F MP K ++SWN I+ L + EA++ F M + D+ +F ++SAC+
Sbjct: 380 AKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAI 439
Query: 156 SGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL--------LGRGGFLG----------- 196
+E+G FG + T G+ D +VD +GR F G
Sbjct: 440 KSSLELGEQLFG-KAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNT 498
Query: 197 ------------EAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
EA++L ++ ++P A+ + +L AC G +E G+ + + +
Sbjct: 499 MLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTM 554
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 72 NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMF 131
N+ SV N L+ +Y++ G+L A +F MPQ N SWN +I A G +++E+F
Sbjct: 25 NLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPFSWNTLIEAHINLGHRNKSLELF 84
Query: 132 EKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGR 191
M + ++ ++S S SG ++ + F M +P V + M+ R
Sbjct: 85 HAMPHKTHY----SWNLIVSTLSKSGDLQQAQALFNAMPMK---NPLV--WNSMIHGYSR 135
Query: 192 GGFLGEAMSLIQKLPMKP------DAVVWGALLGACKTFGNLEMGKQI 233
G+ ++ L +++ + P DA V + GAC L+ GKQ+
Sbjct: 136 HGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALDCGKQV 183
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 109/272 (40%), Gaps = 38/272 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM---CVSGVMPDNATLVSILSSCSHMGDL 58
MP+KN + WNS+I + + G ++ LF M + V D L ++ +C+ + L
Sbjct: 118 MPMKNPLVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFAL 177
Query: 59 ALGKKAHD--YICDNNITVSVTLCNSLMNMYAKCGALQT--------------------- 95
GK+ H +I LC+S++N Y KCG L +
Sbjct: 178 DCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVS 237
Query: 96 ----------AMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEIT 145
A +F V WN II +G EA+ +F KMR +G++ D
Sbjct: 238 GYANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSA 297
Query: 146 FTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKL 205
+LS S VE+ + + G + D+ + ++D + ++ L +L
Sbjct: 298 VANILSISSSLLNVELVKQMHD-HAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFHEL 356
Query: 206 PMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ DA++ ++ G +E K++ +
Sbjct: 357 KVY-DAILLNTMITVYCNCGRVEDAKEVFNSM 387
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 179/297 (60%), Gaps = 11/297 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV--SGVMPDNATLVSILSSCSHMGDLA 59
M K+ +S+N++I+C+ Q + EA++LF M S + PD TL S++S+CS +G+L
Sbjct: 289 MDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLE 348
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
+ I + I + L +L+++YAKCG++ A ++F G+ +++VV+++ +I
Sbjct: 349 HWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDKAYELFHGLRKRDVVAYSAMIYGCG 408
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
++G +A+E+FE+M + P+ +T+TG+L+A +H+GL E G F M GI P V
Sbjct: 409 INGRASDAVELFERMAGECIIPNLVTYTGILTAYNHAGLAEEGYRCFISMKDN-GIVPSV 467
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY MVDLLGR G+L EA LI K+PM+P+ VWGALL AC+ NL++G+ ++ ++
Sbjct: 468 DHYGIMVDLLGRAGWLDEAYKLIMKMPMQPNVGVWGALLLACRLHDNLKLGEIAVQHCIK 527
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMV 296
L +G Y LLS +Y+ +W+D KK+ + I I+I GC + +V
Sbjct: 528 LESETAGYYSLLSGIYATVGKWNDAKKLTTGVEGKKI--------IKIPGCSWTQLV 576
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 120/238 (50%), Gaps = 12/238 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P+K+ +SWN ++S + + G+ A LF +M N T+++ C G +
Sbjct: 196 IPLKDVISWNCMVSGYAKAGKMDRACYLFQQMPERNFASWN-TMITGYVDC---GSIVEA 251
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ D + N SV+L +++ Y+K G + +A ++F M K+++S+N +I A
Sbjct: 252 RELFDAMPRRN---SVSLI-TMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQS 307
Query: 122 GSGKEAIEMFEKMRA--SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
KEA+++F M S L PD++T ++SACS G +E R+ +++ FGI D
Sbjct: 308 SKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLEHWRWIESQINN-FGIVLDD 366
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++DL + G + +A L L K D V + A++ C G ++ +++
Sbjct: 367 HLATALIDLYAKCGSIDKAYELFHGL-RKRDVVAYSAMIYGCGINGRASDAVELFERM 423
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 10/232 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
++ SW +I Q+GQ EA+ L+ +M G+ P + + SIL SC+ + D G H
Sbjct: 68 DSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVEDDLCGLLIH 127
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
++ V + +L+++Y K G + TA +F MP KNVVSWN ++ G+
Sbjct: 128 GHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLD 187
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
E F+++ D I++ ++S + +G ++ Y F M + A + M
Sbjct: 188 EGQRFFDEIP----LKDVISWNCMVSGYAKAGKMDRACYLFQQMPER-----NFASWNTM 238
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ G + EA L +P + + + G K+ G++ +++ Q+
Sbjct: 239 ITGYVDCGSIVEARELFDAMPRRNSVSLITMIAGYSKS-GDVHSARELFDQM 289
>Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1721493-1719058 | 20130731
Length = 774
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 176/316 (55%), Gaps = 4/316 (1%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
VSW +IIS E +A LFC++ + D T L +C++ + H
Sbjct: 368 VSWTAIISV-FAERDPEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQ 426
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + N+L++ Y + G+L + +F M ++VSWN ++ + A+HG K+A
Sbjct: 427 VMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDA 486
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+++F++M + PD TF LL+ACSH+GLVE G F M+ + GI+P + HY+CMVD
Sbjct: 487 LDLFKQM---DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVD 543
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
L GR G + EA LI+K+PMKPD+V+W +LLG+C+ G ++ K + L +S
Sbjct: 544 LYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLA 603
Query: 248 YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSI 307
Y+ +SN+YS + + IRK M DS ++K +S +E+ ++F ++H +I
Sbjct: 604 YIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQVHEFTSGGQHHPKRQAI 663
Query: 308 YSMVDQLMDHLKSVGY 323
S ++ L+ LK +GY
Sbjct: 664 LSRLETLIGQLKEMGY 679
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSW ++S + Q G E LF M ++ P+ S+L +C D+ G
Sbjct: 141 MPRRNFVSWTVLVSGYAQFGLIRECFALFSGM-LACFRPNEFAFASVLCACEEQ-DVKYG 198
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGA------LQTAMD---IFFGMPQKNVVSWN 112
+ H ++ SV + N+L+ MY+KC QT D +F M +N++SWN
Sbjct: 199 LQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWN 258
Query: 113 VIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH 155
+I G G +AI +F M +G+ + T G+LS+ +H
Sbjct: 259 SMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNH 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 48 ILSSCSHMGDLALGKKAHDYICDNN--ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ 105
+ +C+ + G H YI + + I + L N+L+NMY KCG L A +F MP+
Sbjct: 84 LFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPR 143
Query: 106 KNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY 165
+N VSW V++ A G +E +F M A P+E F +L AC + +Y
Sbjct: 144 RNFVSWTVLVSGYAQFGLIRECFALFSGMLAC-FRPNEFAFASVLCACEEQDV----KYG 198
Query: 166 FGLMSSTFGISPDVAHYA--CMVDLLGR--GGFLG 196
+ ++ +S D + Y ++ + + GGF G
Sbjct: 199 LQVHAAALKMSLDFSVYVANALITMYSKCSGGFGG 233
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 72/128 (56%), Gaps = 5/128 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M + VSWNS++ + G+ +A++LF +M V PD+AT V++L++CSH G + G
Sbjct: 462 MGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHAGLVEEG 518
Query: 62 KKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALA 119
+ + + +++ I + + ++++Y + G + A ++ MP K + V W+ ++G+
Sbjct: 519 TQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCR 578
Query: 120 LHGSGKEA 127
HG A
Sbjct: 579 KHGEADLA 586
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 175/303 (57%), Gaps = 3/303 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLAL 60
MP KN ++W ++++ +VQ G EA++LF +M + G+ P T V++L +CS + L
Sbjct: 245 MPKKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPE 304
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFF-GMP-QKNVVSWNVIIGAL 118
G++ H I S + ++L+NMY+KCG A +F G+ ++++WN +I A
Sbjct: 305 GQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAY 364
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
A HG G EAI +F KM+ G +++T+ GLL+ACSH+GL + G YF + +
Sbjct: 365 AHHGYGNEAIILFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYMQVR 424
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
HY C++DL GR G L EA+++I+ L + VWGALL C GN ++G+ + ++L
Sbjct: 425 EDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSVWGALLAGCSVHGNADIGRLVADKVL 484
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
++ ++ Y+L SNMY+ ++ +R M D G+KK S I++ F+V+D
Sbjct: 485 KMEPENADTYLLASNMYASVGMREEAANVRMKMKDKGLKKQPGCSWIDVGNTVQVFVVND 544
Query: 299 KNH 301
K+H
Sbjct: 545 KSH 547
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 114/234 (48%), Gaps = 19/234 (8%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +++ W ++IS +++ G EA +LF R+ +A I+ + G + +
Sbjct: 27 MSERDSCLWTTMISGYIKCGLINEARKLFDRL--------DAEKSVIVWTAMVSGYIKIN 78
Query: 62 KKAHDYICDNNITV-SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ N + V +V N++++ YA+ G Q AMD+F MP++NVVSWN ++ ALA
Sbjct: 79 RIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMDLFGRMPERNVVSWNTVMTALAH 138
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G +A +F +MR D +++T +++ S +G V+ R F M +V
Sbjct: 139 CGRIDDAERLFNEMRER----DVVSWTTMVAGLSKNGRVDDARDVFDRMPIR-----NVV 189
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
+ M+ + G EA+ L +++P + D W ++ G+L +++
Sbjct: 190 SWNAMIAGYAQNGRFDEALKLFERMPER-DMPSWNTMVTGFIQNGDLNRAEKLF 242
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 117/278 (42%), Gaps = 76/278 (27%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP++N VSWN++I+ + Q G+ EA++LF RM MP
Sbjct: 183 MPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERD-MPS-------------------- 221
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
N+++ + + G L A +F MP+KNV++W ++ H
Sbjct: 222 ------------------WNTMVTGFIQNGDLNRAEKLFHAMPKKNVITWTAMMTGYVQH 263
Query: 122 GSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMS------STFG 174
G +EA+++F KM+A+ GL P TF +L ACS + G+ ++S ST+
Sbjct: 264 GLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYV 323
Query: 175 ISP--------------------------DVAHYACMVDLLGRGGFLGEAMSL---IQKL 205
+S D+ + M+ G+ EA+ L +Q+L
Sbjct: 324 VSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAIILFNKMQEL 383
Query: 206 PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
+ + V + LL AC G + G + +LL+ RY
Sbjct: 384 GFQANDVTYVGLLTACSHAGLFDEGFKYFDELLK-NRY 420
>Medtr7g082550.1 | PPR containing plant-like protein | HC |
chr7:31648795-31646693 | 20130731
Length = 487
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 175/317 (55%), Gaps = 17/317 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V+N VSW +II+ QE + +ELF RM + P+ T S+LS+C G L G
Sbjct: 169 MSVRNVVSWTAIIAGFAQEWRVDMCLELFRRMRGLELKPNYFTYTSLLSACMGSGALGHG 228
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H I + + N+L+ MY+KCG + A+ IF M K+VV+WN
Sbjct: 229 RGVHCQIIQMGFHCYLHVENALIAMYSKCGVIVDALYIFENMVSKDVVTWN--------- 279
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
M MR G+ PD +TF G+LS+C H GLV+ G+ YF M G+ P++ H
Sbjct: 280 -------SMIVGMRIMGVNPDAVTFLGILSSCRHGGLVKEGQVYFSSMVD-HGLQPELDH 331
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+C+VDLLGR G L EA+ IQ +P+ P+AV+WG+LL + + GN+ +G + + L L
Sbjct: 332 YSCIVDLLGRAGLLLEALDFIQNMPVCPNAVIWGSLLSSSRLHGNVWIGIRAAESRLSLE 391
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
S + L+N+Y+ W+ + ++R++M D G+K S IE+ ++F DK++
Sbjct: 392 PGCSSTLLQLANLYASVGWWNQVARVRQLMKDKGLKPNPGCSWIEVKNKVHRFESQDKSN 451
Query: 302 EVSTSIYSMVDQLMDHL 318
I ++D L+DH+
Sbjct: 452 SRMNGILLIMDSLVDHM 468
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
Query: 37 GVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTA 96
G+ D L LS C D G + H +V + +SL+++Y++CG L A
Sbjct: 103 GLGIDVCFLSHALSLCGSKRDFYGGIQYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDA 162
Query: 97 MDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS 156
+F M +NVVSW II A +E+F +MR L P+ T+T LLSAC S
Sbjct: 163 YRVFDEMSVRNVVSWTAIIAGFAQEWRVDMCLELFRRMRGLELKPNYFTYTSLLSACMGS 222
Query: 157 GLVEMGR-YYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWG 215
G + GR + ++ F V + ++ + + G + +A+ + + + K D V W
Sbjct: 223 GALGHGRGVHCQIIQMGFHCYLHVEN--ALIAMYSKCGVIVDALYIFENMVSK-DVVTWN 279
Query: 216 ALLGACKTFG 225
+++ + G
Sbjct: 280 SMIVGMRIMG 289
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 201 bits (510), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 173/321 (53%), Gaps = 2/321 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K ++WN+++S + E L M GV P+ T+ SIL C+ + +L GK+
Sbjct: 392 KGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEF 451
Query: 65 HDYIC--DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H Y+ + + L NSL+ MY++ G + A +F + +K+ V++ +I + G
Sbjct: 452 HCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSG 511
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
G+ A+++F +MR + PD +T +L ACSHSGLV G+ F M +GI P V HY
Sbjct: 512 DGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHY 571
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
+CMVDL GR G L +A +I + KP + +W L+GACK GN +G+ +LLE+
Sbjct: 572 SCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGACKIHGNTVIGEWAAGKLLEMKP 631
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHE 302
SG Y+L++NMY+ + R D + R M DSG K+ + +++ F+ D ++
Sbjct: 632 DHSGYYLLIANMYAAANRLDKEAEARTYMRDSGAKRTPGCAWVDVGRELCPFLAGDTSNP 691
Query: 303 VSTSIYSMVDQLMDHLKSVGY 323
S I M+ +L +K GY
Sbjct: 692 RSCEISPMMKRLNILMKDAGY 712
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 123/271 (45%), Gaps = 38/271 (14%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ + WN +IS +V+ +A+ ++ RM GV+PD+ T S+L +C + D G H
Sbjct: 157 DPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVH 216
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
I +++I S+ + N+L+ MY + G L+ A ++F MP ++ VSWN +I A G
Sbjct: 217 KAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWD 276
Query: 126 EAIEMFEKMRASGLFPDEITFTGL----------------------------------LS 151
EA +F MR +G+ + I + + L+
Sbjct: 277 EAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQLDSVAMVVGLN 336
Query: 152 ACSHSGLVEMGRYYFGLMSST-FGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPD 210
ACSH G V++G+ G T F + +V + ++ + R L A L +K+ K
Sbjct: 337 ACSHIGAVKLGKEIHGHAVRTCFDVFDNVKN--TLITMYSRCRDLNHAYLLFRKIDEK-G 393
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ W A+L E +L+++L G
Sbjct: 394 LITWNAMLSGFAHMDRSEEVSFLLREMLREG 424
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 145/366 (39%), Gaps = 84/366 (22%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV---------------------- 38
+MP ++ VSWN++ISC+ G EA LF M +G+
Sbjct: 253 IMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKG 312
Query: 39 ------------MPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNM 86
D+ +V L++CSH+G + LGK+ H + V + N+L+ M
Sbjct: 313 ALKLFSQMRAVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITM 372
Query: 87 YAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITF 146
Y++C L A +F + +K +++WN ++ A +E + +M G+ P+ +T
Sbjct: 373 YSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTI 432
Query: 147 TGLLSAC-------------------------------------SHSGLVEMGRYYFGLM 169
+L C S SG V R F +
Sbjct: 433 ASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSL 492
Query: 170 SSTFGISPDVAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALLGACKTFGN 226
S D Y M+ G G A+ L +++L +KPD V A+L AC G
Sbjct: 493 SRK-----DEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGL 547
Query: 227 LEMGKQILKQLLELGRYDSGL--YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISS 284
+ G+ + ++++E+ D + Y + +++ + D K ++++ K AI +
Sbjct: 548 VAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLD---KAKEVITGMSCKPTSAIWA 604
Query: 285 IEIDGC 290
I C
Sbjct: 605 TLIGAC 610
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 48 ILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN 107
+L C+++ L+ GK+ H +I I + L + L+N YA L A + +
Sbjct: 98 LLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSNSFD 157
Query: 108 VVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS------------- 154
+ WN++I + ++AI ++ +M + G+ PD+ T+ +L AC
Sbjct: 158 PLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHK 217
Query: 155 -------------HSGLVEM-GRY-YFGLMSSTFGISP--DVAHYACMVDLLGRGGFLGE 197
H+ LV M GR+ + F I P D + M+ G E
Sbjct: 218 AIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDE 277
Query: 198 AMSL---IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
A L +++ ++ + ++W + G C GN + ++ Q+ + + DS
Sbjct: 278 AFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQLDS 328
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 167/274 (60%), Gaps = 5/274 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM-----CVSGVMPDNATLVSILSSCSHMG 56
MP +N S ++++S +V+ +E ++LF + + V + A LVS+L++C+ MG
Sbjct: 197 MPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMG 256
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
GK H Y+ +N + + L +L++ YAKCG ++ A +F M K+V +W+ +I
Sbjct: 257 AFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMIL 316
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
LA++G+ K A+E+FEKM G P+E+TF G+L+AC+H L FG+MS + I+
Sbjct: 317 GLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNIT 376
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
P + HY C+VD+L R G + +A+ I + ++PD +WG+LL C G+ E+G+++ K
Sbjct: 377 PSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKY 436
Query: 237 LLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKI 270
L+E SG YVLL+NMY+ +W+ + ++ ++
Sbjct: 437 LIEFDPEHSGRYVLLANMYANMGKWEGVSEVAEV 470
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 117/273 (42%), Gaps = 35/273 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL- 60
MP N +NSII+ + Q +++ +F +M + P++ T +++ SC + L
Sbjct: 68 MPNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVTLSSLEQV 127
Query: 61 -------GKKAHDYICDNNITV--------------------SVTLCNSLMNMYAKCGAL 93
G + Y + I V +V SL++ Y CG +
Sbjct: 128 FTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLV 187
Query: 94 QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG----- 148
D+F MPQ+N S + ++ + E +++F +++ + F G
Sbjct: 188 NEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVS 247
Query: 149 LLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK 208
+L+AC+ G E G++ + G+ D+ ++D + G++ +A + K+ +K
Sbjct: 248 VLNACTVMGAFEEGKWIHSYVEEN-GLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVK 306
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
D W A++ GN +M ++ +++ ++G
Sbjct: 307 -DVATWSAMILGLAINGNNKMALELFEKMEKVG 338
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 154/273 (56%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V WNS+I+ +A+ F RM G P + +I SSC+ + L G++ H
Sbjct: 483 DVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIH 542
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
I + +V + +SL+ MY KCG + A F MP KN+V+WN +I A +G G
Sbjct: 543 AQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGL 602
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+ +++ M +SG PD+ITF +L+ACSHS LV+ G F M F + P + HY C+
Sbjct: 603 EAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCI 662
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
+D LGR G E ++ +P K D +VW +L +C+ N+ + K+ ++L L +S
Sbjct: 663 IDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNS 722
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
YVLL+NMYS RWDD + +R +M+D+ I K
Sbjct: 723 APYVLLANMYSSMGRWDDAQVVRDLMSDNQIHK 755
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 142/279 (50%), Gaps = 23/279 (8%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSH----------- 54
N V++ +++ Q Q E +ELF M G+ D+ +L +IL C+
Sbjct: 203 NEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSR 262
Query: 55 -MGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNV 113
+ A GK+ H + + LCNSL++MYAK G + +A ++F + + +VVSWN+
Sbjct: 263 GLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNI 322
Query: 114 IIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTF 173
+I ++A+E F++M+ G PD++T+ +L+AC SG V++GR F MS
Sbjct: 323 MISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMS--- 379
Query: 174 GISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMG 230
SP + + ++ + GEA+ L +K+ + PD +L +C G LE G
Sbjct: 380 --SPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAG 437
Query: 231 KQILKQLLELGRYDSGLYVL--LSNMYSESQRWDDMKKI 267
KQ+ +LG YD +YV L N+YS+ + + K +
Sbjct: 438 KQVHAVSQKLGFYDD-VYVASSLINVYSKCGKMEVSKHV 475
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 124/282 (43%), Gaps = 52/282 (18%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLAL 60
MP +N VS N+II+ V+ G +A++ + M V V P + T ++ S+C + D+
Sbjct: 97 MPERNTVSLNTIITTMVKNGYERQALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNC 156
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ H + ++ + N+L+ MY KCG + A +F G+ + N V++ ++G L+
Sbjct: 157 GRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQ 216
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS---GLVEMGRYYFGL--------- 168
KE +E+F M G+ D ++ + +L C+ G+ + R GL
Sbjct: 217 TNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSR---GLSTNAQGKQI 273
Query: 169 --MSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP-------------------- 206
++ G D+ ++D+ + G + A ++ + L
Sbjct: 274 HTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDS 333
Query: 207 --------------MKPDAVVWGALLGACKTFGNLEMGKQIL 234
+PD V + +L AC G++++G+QI
Sbjct: 334 EKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIF 375
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 96/230 (41%), Gaps = 34/230 (14%)
Query: 44 TLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGA----------- 92
L+++L SC L+ K H I + LCN L+++Y+KC
Sbjct: 7 NLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKI 66
Query: 93 --------------------LQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFE 132
LQ A +F MP++N VS N II + +G ++A++ ++
Sbjct: 67 PHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYD 126
Query: 133 KMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGR 191
M + P ITF + SAC V GR GL+ G ++ ++ + +
Sbjct: 127 LMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKV-GFDSNIYVSNALLCMYTK 185
Query: 192 GGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
G +A + + + ++P+ V + ++G ++ G ++ + +L G
Sbjct: 186 CGLNEDAFRVFEGI-VEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKG 234
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 5/146 (3%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MMP KN V+WN +I + G EA+ L+ M SG PD+ T V++L++CSH +
Sbjct: 579 MMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDE 638
Query: 61 GKKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGAL 118
G + + + + +++ + G I MP K + + W V++ +
Sbjct: 639 GVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSC 698
Query: 119 ALHGS---GKEAIEMFEKMRASGLFP 141
+H + K A E ++ P
Sbjct: 699 RVHANVSLAKRAAEELHRLNPRNSAP 724
>Medtr7g111120.1 | PPR containing plant-like protein | HC |
chr7:45588277-45586755 | 20130731
Length = 417
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 177/287 (61%), Gaps = 6/287 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
MP ++ VSW ++IS ++ G + +++ LF RM V G+ PD +LS C+H+ L
Sbjct: 125 MPHRDIVSWCNMISAYLNVGSYMQSLYLFRRMLFVEGIKPDQVIACLVLSGCAHVERHGL 184
Query: 61 --GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
GK H YI N ++V + +L+NMYAK G L+ A + M +++V SW ++I
Sbjct: 185 LGGKSVHGYIVKNGWELNVEIGAALVNMYAKGGVLRNAAMVLELMDERDVTSWTLMICGA 244
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G KEA+ +FEKM+ G+ P+E+TFTG+LSAC+H G VE GR YF ++ G+ P
Sbjct: 245 VRCGFNKEALVVFEKMQMDGVKPNELTFTGVLSACAHGGFVEDGRRYFKMIEEC-GLKPR 303
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
V HYAC+V L+G+ G L EA +I+ + ++PD VV G+ L ACK E+ + +++Q+L
Sbjct: 304 VQHYACLVYLIGKSGMLEEAYEIIKMMKVEPDVVVLGSFLSACKEHKQFEIAEGVIEQVL 363
Query: 239 ELGRYDS--GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAIS 283
+ + ++ GLY L++++Y + ++ ++++K++ +++ + ++
Sbjct: 364 RMAKPENYRGLYSLIADLYVIGDKSEEAERMKKLIIKEHLRQAKGLN 410
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 148/378 (39%), Gaps = 72/378 (19%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHM--------GDLAL 60
SW I +A++L+ +M +GV D ++ L S + + + L
Sbjct: 4 SWALAIKKAYSSSSPRKAIQLYSKMHRNGVPIDTFCILFTLKSSTRLPIIHHLHAHIIKL 63
Query: 61 GKKAHDYI--CDNNITVSVTLC-----------------NSLMNMYAKCGALQTAMDIFF 101
G +H +I C N V ++ N+++ Y++ ++ A +F
Sbjct: 64 GFTSHFHISTCLLNSYVFLSFLDACILFDEMPQRDTVTWNTMILGYSRLEDVKKARQLFD 123
Query: 102 GMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMR-ASGLFPDEITFTGLLSACSH----- 155
MP +++VSW +I A GS +++ +F +M G+ PD++ +LS C+H
Sbjct: 124 EMPHRDIVSWCNMISAYLNVGSYMQSLYLFRRMLFVEGIKPDQVIACLVLSGCAHVERHG 183
Query: 156 -----------------------SGLVEM----GRYYFGLMSSTFGISPDVAHYACMVDL 188
+ LV M G M DV + M+
Sbjct: 184 LLGGKSVHGYIVKNGWELNVEIGAALVNMYAKGGVLRNAAMVLELMDERDVTSWTLMICG 243
Query: 189 LGRGGFLGEAMSLIQKLPM---KPDAVVWGALLGACKTFGNLEMGKQILKQLLELG---- 241
R GF EA+ + +K+ M KP+ + + +L AC G +E G++ K + E G
Sbjct: 244 AVRCGFNKEALVVFEKMQMDGVKPNELTFTGVLSACAHGGFVEDGRRYFKMIEECGLKPR 303
Query: 242 --RYDSGLYVL-LSNMYSESQRWDDMKKIRK--IMNDSGIKKCRAISSIEIDGCCYQFMV 296
Y +Y++ S M E+ M K+ ++ S + C+ EI + ++
Sbjct: 304 VQHYACLVYLIGKSGMLEEAYEIIKMMKVEPDVVVLGSFLSACKEHKQFEIAEGVIEQVL 363
Query: 297 DDKNHEVSTSIYSMVDQL 314
E +YS++ L
Sbjct: 364 RMAKPENYRGLYSLIADL 381
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 178/327 (54%), Gaps = 7/327 (2%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P KN VSW S+I + + G A+ LF M + D+ ++L +C+ + L GK
Sbjct: 297 PEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGK 356
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H I + + + NSL+NMYAKCG ++ + G+ K++VSWN ++ A L+G
Sbjct: 357 MVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGINDKDLVSWNSMLFAFGLNG 416
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
G EAI MF +M ASG+ PDE+TFTGLL CSH GL++ G +F MS +G+ + H
Sbjct: 417 RGNEAICMFREMVASGVRPDEVTFTGLLMTCSHLGLIDEGFAFFQSMSLEYGLVQGMDHV 476
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPM--KPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
ACMVD+LGRGG++ EA SL +K + LLGAC G+L G + + + L
Sbjct: 477 ACMVDMLGRGGYVAEAQSLARKYSKTSRDKTNSCEVLLGACHAHGDLGTGSSVGEYVKNL 536
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
YVLLSNMY S +W + + +RK M D G+KK S IEI F+ +
Sbjct: 537 EPKKEVGYVLLSNMYCASGKWKEAEMVRKEMMDQGVKKVPGCSWIEIRNVVTAFVSGNNL 596
Query: 301 H----EVSTSIYSMVDQLMDHLKSVGY 323
+ ++S +Y ++ M H + + +
Sbjct: 597 YPCMADISKILY-FLELEMRHTRPINF 622
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 32/187 (17%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
MP ++ V+WN++++ + + G + + +LF M +S PDN + + ++SC+ D+
Sbjct: 31 MPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDNFSYSAAINSCAGASDIRF 90
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCG----------------------------- 91
G K H + + S+ + N+L++MY KC
Sbjct: 91 GTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYSNEVTWCSLLFAYAN 150
Query: 92 --ALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGL 149
A +IF MP+K ++WN+II A A G + + +F++M + PD+ TF+ L
Sbjct: 151 TCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQPDQWTFSAL 210
Query: 150 LSACSHS 156
+SAC+ S
Sbjct: 211 MSACTES 217
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 127/305 (41%), Gaps = 65/305 (21%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K ++WN II+ H + G+ + LF MC + PD T +++S+C+ + G
Sbjct: 164 MPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQPDQWTFSALMSACTESMESLHG 223
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA---- 117
H ++ + + ++ + NS+++ YAK A+ +F N VSWN II A
Sbjct: 224 CMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKV 283
Query: 118 -------LAL--------------------HGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
LA +G+G A+ +F M+ + D++ +L
Sbjct: 284 GDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVL 343
Query: 151 SACS-----------HSGLVEMG--RYYF----------------GLMSSTFGIS-PDVA 180
AC+ HS ++ +G +Y F G + GI+ D+
Sbjct: 344 HACASLAILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGINDKDLV 403
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ M+ G G EA+ + +++ ++PD V + LL C G ++ G + +
Sbjct: 404 SWNSMLFAFGLNGRGNEAICMFREMVASGVRPDEVTFTGLLMTCSHLGLIDEGFAFFQSM 463
Query: 238 -LELG 241
LE G
Sbjct: 464 SLEYG 468
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 165/283 (58%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ W +IS V ++ EA+ F RM P+ T+ S+LS+ + + L G +
Sbjct: 383 KDDFVWTVLISGFVSNEEYEEALHWFVRMSREQCRPNPLTISSVLSASASLVALNEGLQI 442
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ N+ +++ NSL++ YAKCG + A IF + + NVVS+N +I A +G G
Sbjct: 443 HSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFAQNGFG 502
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+EA+ M+++M+ L P+ +TF +LSAC+H+GL+E G F M S +GI P+ HYAC
Sbjct: 503 EEALSMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGWNLFNTMKSRYGIEPEADHYAC 562
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLLGR G L EA+ ++ +P++P + VWGALL A +++ K + + EL +
Sbjct: 563 MVDLLGRAGLLDEAIHFVRSMPLEPHSGVWGALLAASCAHQRIDLAKLAAQHITELEPAN 622
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEI 287
+ YV+LSN YS S + + +RK N GIKK S I I
Sbjct: 623 ATPYVVLSNTYSASGQKFEGDLVRKTKNLKGIKKSPGCSWITI 665
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSI-LSSCSHMGDLAL 60
MP +N VSW+++I ++++G LF M GV+ N+T ++I + C + G +
Sbjct: 216 MPERNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKE 275
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H + L N+++ MY+ G A +F GM K++V+WN +I
Sbjct: 276 GIQIHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLISGYIY 335
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLV 159
+ A E+FE+M L I++T ++ + G +
Sbjct: 336 NNEVDAAYEVFERMPEKDL----ISWTAMIRGFATDGRI 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 107/267 (40%), Gaps = 41/267 (15%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVS-ILSSCSHMGDLAL 60
M KN V+W ++++ + Q GQ A +LF M NA + I + C+ L
Sbjct: 56 MSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPERTTATYNAMISGYIRNGCNVTKAYEL 115
Query: 61 GKKAHDYICDNNITVSVTL----------------------------CNSLMNMYAKCGA 92
HD N ++ + + N+L+N Y K G
Sbjct: 116 FTSFHD---RNEVSYAAMIMGLVKARKFDLAEKLYREAPHEFRDPVCSNALINGYLKIGE 172
Query: 93 LQTAMDIF--FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
+ A+ +F G+ +++VVSW+ ++G L G A +F++M + ++++ ++
Sbjct: 173 MNEALRVFENVGVSKRDVVSWSAVVGGLCRDGRIDNARMLFDRMPERNV----VSWSAMI 228
Query: 151 SACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS---LIQKLPM 207
GL E G F M + + M+ G G + E + L+ +L
Sbjct: 229 DGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIHGLVSRLGF 288
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQIL 234
+ +V+ ++ FG +M K++
Sbjct: 289 EFGSVLSNTIITMYSLFGYTDMAKKVF 315
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 167/278 (60%), Gaps = 11/278 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +++VSWNS+++ +V+ G EA+ +F +M + G PD ++ +IL+S S L +G
Sbjct: 275 MHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKPDYFSISAILTSVS---SLDVG 331
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H ++ + ++++ NSL+ Y+K G L A IF MP+++VVSWN II + H
Sbjct: 332 VQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPERDVVSWNSIISS---H 388
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
EAI FEKM +G PD+ITF LLSAC+H GLV G F LM + I P + H
Sbjct: 389 CKHPEAISYFEKMEEAGEVPDKITFVSLLSACAHLGLVNDGERLFALMCEKYKIKPIMEH 448
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAV---VWGALLGACKTFGNLEMGKQILKQLL 238
Y CMV+L GR G + +A S+I + M +AV +WGALL AC GN+ +G+ +L
Sbjct: 449 YGCMVNLYGRAGLVEKAYSIIVR--MDSEAVGPTLWGALLYACLLHGNVTIGEISANKLF 506
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGI 276
EL + +VLL +Y ++ R +DM++IR +M D G+
Sbjct: 507 ELEPDNEHNFVLLMKIYEKAGRLEDMERIRMMMVDRGL 544
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 112/217 (51%), Gaps = 6/217 (2%)
Query: 7 AVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHD 66
A WNS+IS + + G + +A+ L+ +M GV PD T +L C +G + +G++ H
Sbjct: 179 AFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVLKVCGGIGLVGVGEEVHR 238
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
++ + N+L++MY+KCG + A IF M ++ VSWN ++ HG E
Sbjct: 239 HVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFNKMHFRDSVSWNSMLTGYVRHGLEVE 298
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMV 186
AI +F +M G PD + + +L++ S +++G G + G+ +++ ++
Sbjct: 299 AINIFRQMVLKGEKPDYFSISAILTSVSS---LDVGVQIHGWVIRQ-GVEWNLSIANSLI 354
Query: 187 DLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA-CK 222
+ G L +A S+ +P + D V W +++ + CK
Sbjct: 355 IAYSKHGRLDKARSIFNLMPER-DVVSWNSIISSHCK 390
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP ++ VSWNSIIS H +H EA+ F +M +G +PD T VS+LS+C+H+G +
Sbjct: 372 LMPERDVVSWNSIISSHC---KHPEAISYFEKMEEAGEVPDKITFVSLLSACAHLGLVND 428
Query: 61 GKKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV--VSWNVIIGA 117
G++ +C+ I + ++N+Y + G ++ A I M + V W ++ A
Sbjct: 429 GERLFALMCEKYKIKPIMEHYGCMVNLYGRAGLVEKAYSIIVRMDSEAVGPTLWGALLYA 488
Query: 118 LALHGSGK----EAIEMFEKMRASGLFPD-EITFTGLLSACSHSGLVE 160
LHG+ A ++FE L PD E F L+ +G +E
Sbjct: 489 CLLHGNVTIGEISANKLFE------LEPDNEHNFVLLMKIYEKAGRLE 530
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 37 GVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTA 96
G+ D S+L +C G + G H I + +V + + L+ +YA G + A
Sbjct: 106 GIKIDPEIYASLLETCYRFGAIHHGIWLHRLIPPALLHRNVGISSKLVRLYASFGYMDDA 165
Query: 97 MDIFFGMPQKNVVS--WNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
D+F M ++++ + WN +I A G +AI ++ +M G+ PD TF +L C
Sbjct: 166 HDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVLKVCG 225
Query: 155 HSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW 214
GLV +G + G D +VD+ + G + +A + K+ + D+V W
Sbjct: 226 GIGLVGVGEEVHRHVVRC-GFWDDGFVLNALVDMYSKCGDIVKARKIFNKMHFR-DSVSW 283
Query: 215 GALLGACKTFGNLEMGKQILKQLLELGR 242
++L G I +Q++ G
Sbjct: 284 NSMLTGYVRHGLEVEAINIFRQMVLKGE 311
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 174/313 (55%), Gaps = 3/313 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+ VSW+++I + EA+ LF M +SG D +++IL + + +G L
Sbjct: 382 RTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYL 441
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ--KNVVSWNVIIGALALHG 122
H Y N+ +L SL+N YAKCG ++ A +F K++V+WN +I A + HG
Sbjct: 442 HGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHG 501
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+ E++ +++ S + PD +TF G+L+AC +SGLV+ G+ F M +G P H
Sbjct: 502 EWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPSKEHN 561
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG-NLEMGKQILKQLLELG 241
ACMVDLLGR G + EA +I+ + DA V+G LL ACK G + + ++L+++
Sbjct: 562 ACMVDLLGRAGKIDEARKIIETNQLNSDARVYGPLLSACKMHGLETDFAELAAEKLIKME 621
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ YVLLSN+++ + +WD K+R + D G+KK S + +DG ++F V D +H
Sbjct: 622 PENPANYVLLSNIFAAAGKWDKFAKMRSFLRDRGLKKTPGCSWVVLDGQFHEFRVADHSH 681
Query: 302 EVSTSIYSMVDQL 314
S IYS++ L
Sbjct: 682 PRSEDIYSVLKVL 694
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 41/277 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ V WN +IS + G E++EL M SG+ PD T + +SS + + + G
Sbjct: 278 MPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWG 337
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + N V++ NSL++MY+ C L +A IF + + VVSW+ +I A+H
Sbjct: 338 KQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAMH 397
Query: 122 GSGKEAIEMFEKMRASGLFPDEITF----------------------------------- 146
+ EA+ +F +M+ SG D +
Sbjct: 398 DNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSLK 457
Query: 147 TGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP 206
T LL++ + G +EM R F S+ D+ + M+ G + L ++
Sbjct: 458 TSLLNSYAKCGCIEMARKLFNEEKSSL---KDIVAWNSMITAYSNHGEWFQCFELYNQIK 514
Query: 207 M---KPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+ KPD V + +L AC G ++ GK+I K+++++
Sbjct: 515 LSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDI 551
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 88/154 (57%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN++I + G+ E+ ELFCRM V P++ TL+++L + L +GK H +
Sbjct: 185 WNNLIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVV 244
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+N+ +T+ +L++MYAK +L+ A +F MP+K+VV WN++I + G KE++E
Sbjct: 245 ASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLE 304
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR 163
+ M SG+ PD T +S+ + +E G+
Sbjct: 305 LVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGK 338
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHM-GDLALGKKA 64
+++ +N+ + G++ + + L+ M + PD S+L S ++ + L A
Sbjct: 83 DSIIYNAFLRNLFMFGEYEKTLFLYKEMVQKSMCPDEDCCFSVLKSLFYVFHEKGLIMMA 142
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS----WNVIIGALAL 120
H ++ + + N+L+ +Y G L G+ ++ V+ WN +I
Sbjct: 143 HGHVVKLGMDAFDLVGNTLIELY---GFLNGN-----GLVERKSVTKLNFWNNLIYEAYE 194
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G E+ E+F +MR + P+ +T LL A S +++G+ L+ ++ + ++
Sbjct: 195 SGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVVAS-NLCKELT 253
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
++ + + L +A + +K+P K D VVW ++
Sbjct: 254 VNTALLSMYAKLDSLKDARLMFEKMPEK-DVVVWNIMISV 292
>Medtr3g077200.1 | PPR containing plant-like protein | HC |
chr3:34651569-34656476 | 20130731
Length = 553
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 165/279 (59%), Gaps = 1/279 (0%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V+W+++IS + Q G++ +A+ F ++ + D+ + ++L+S + M ++ G + H Y
Sbjct: 272 VTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDSVLIATVLASITQMANVLPGCEIHGY 331
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + + V + ++L++MY+KCG L +F M ++N++S+N +I A LHG +A
Sbjct: 332 VLRHGLESDVKVSSALIDMYSKCGFLHLGTCVFRIMLERNIISYNSMILAYGLHGCASQA 391
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
MF++M GL PDE TF+ LLSAC H+GLV+ GR F M F I HY MV
Sbjct: 392 FTMFDEMLQKGLVPDEGTFSALLSACCHAGLVKDGRELFWRMKDEFNIKARPEHYVYMVK 451
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
LLG G L EA +L Q LP D + GALL C ++GN E+ + + +Q+ + D+
Sbjct: 452 LLGGVGELEEAYNLTQSLPKPVDKAILGALLSCCDSYGNSELAETVAQQIFKSNPADNVY 511
Query: 248 YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
V+LSN+Y+ RWDD+KK+R M G KK R +S IE
Sbjct: 512 RVMLSNIYAGDGRWDDVKKLRDKMV-GGQKKMRGVSWIE 549
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 2/234 (0%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
++ WNS+I + + + A+ LF M V + PDN T + +C+ D + +
Sbjct: 66 TRSVFLWNSMIRAFAKARRFSNAISLFRTMLVDDIRPDNYTYACAIRACADSFDFGMLRV 125
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + + C++L++ Y+K G + A +F G+ + ++V WN +I A G
Sbjct: 126 VHGSAVSVGLGLDPICCSALVSAYSKLGVVHEARRVFDGIVEPDLVLWNSLISAYGGSGM 185
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+ I+MF MR +G PD T GLL + S L+ +G+ GL S G+ D +
Sbjct: 186 WEIGIQMFSSMRLAGKKPDGFTLAGLLGGIADSSLLSIGQELHGL-SQKSGLDSDCHVGS 244
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+V + R + A + + PD V W AL+ G + ++L
Sbjct: 245 LLVSMYSRCKCIDSAYRVFCGI-FNPDLVTWSALISGYSQCGEYQKALLFFRKL 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V WNS+IS + G +++F M ++G PD TL +L + L++G++ H
Sbjct: 171 VLWNSLISAYGGSGMWEIGIQMFSSMRLAGKKPDGFTLAGLLGGIADSSLLSIGQELHGL 230
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + + + L++MY++C + +A +F G+ ++V+W+ +I + G ++A
Sbjct: 231 SQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRVFCGIFNPDLVTWSALISGYSQCGEYQKA 290
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+ F K+ D + +L++ + V G G + G+ DV + ++D
Sbjct: 291 LLFFRKLNMKSKKLDSVLIATVLASITQMANVLPGCEIHGYVLR-HGLESDVKVSSALID 349
Query: 188 LLGRGGFL 195
+ + GFL
Sbjct: 350 MYSKCGFL 357
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 2/186 (1%)
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + +++ ++ +YA + A +F ++V WN +I A A
Sbjct: 23 KQLHACLLKTHLSKDPFYATQIIRLYAFNNHINYAHHVFDKTSTRSVFLWNSMIRAFAKA 82
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
AI +F M + PD T+ + AC+ S M R G S G+ D
Sbjct: 83 RRFSNAISLFRTMLVDDIRPDNYTYACAIRACADSFDFGMLRVVHGSAVSV-GLGLDPIC 141
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ +V + G + EA + + ++PD V+W +L+ A G E+G Q+ + G
Sbjct: 142 CSALVSAYSKLGVVHEARRVFDGI-VEPDLVLWNSLISAYGGSGMWEIGIQMFSSMRLAG 200
Query: 242 RYDSGL 247
+ G
Sbjct: 201 KKPDGF 206
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 167/300 (55%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWN+I++ + Q G +A LF M PD+ T+VS++ C+ G L G
Sbjct: 430 MSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQLHPG 489
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H ++ N + + + SL++MY KCG L +A F MP +++VSW+ II H
Sbjct: 490 KWIHGFVIRNGLRPCILVDTSLVDMYCKCGDLDSAQRCFNLMPSQDLVSWSAIIAGYGYH 549
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+ A+ ++ K + + P+ + F +LS+CSH+GL++ G + M+ FG P++ H
Sbjct: 550 GKGETALRLYSKFLETRIKPNHVIFLSILSSCSHNGLIDQGLNIYESMTRDFGFVPNLEH 609
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ACMVDLL R G + EA +L +++ P V G +L AC+ GN E+G I +++L
Sbjct: 610 HACMVDLLCRAGKVEEAYNLYKRMFSDPVLDVLGIILDACRANGNKELGDIIANDIIKLR 669
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+G YV L++ Y+ +W+ + ++ M G++K S I+I G F D +H
Sbjct: 670 PMSAGNYVQLAHCYASINKWEGVGEVWTHMRSLGLRKIPGWSFIDIHGTITTFFTDHNSH 729
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 120/235 (51%), Gaps = 2/235 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V W ++IS VQ +A+ +F +M G+ P T+ S++++C+ +G LGK
Sbjct: 332 KDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTETMASVITACAQLGAFNLGKSI 391
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H YI +++ NSL+ MYAKCG L + +F M ++++VSWN I+ A +G
Sbjct: 392 HGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIVFDRMSKRDLVSWNAIVAGYAQNGCV 451
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+A +F +MR+ PD IT L+ C+ +G + G++ G + G+ P +
Sbjct: 452 YKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQLHPGKWIHGFVIRN-GLRPCILVDTS 510
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+VD+ + G L A +P + D V W A++ G E ++ + LE
Sbjct: 511 LVDMYCKCGDLDSAQRCFNLMPSQ-DLVSWSAIIAGYGYHGKGETALRLYSKFLE 564
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 11/222 (4%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
S+N++I+ H +G H + + + M + + D T S+L +CS + LG H +
Sbjct: 36 SYNALINRHSTQGAHRQVLITYTSMLNANIPSDAYTFPSLLKACSFLNLFHLGNSLHQRV 95
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
N ++ + +SL+N Y K G A +F MP++NVV W +IG + G +EA
Sbjct: 96 IVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAF 155
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR---YYFGLMSSTFGISPDVAHYACM 185
+F +MR G+ P +T LL S V+ ++G MS D+ M
Sbjct: 156 SLFRQMRYEGIQPSSVTLLSLLFGVSEVPYVQCLHGCAIFYGFMS-------DLNLLNSM 208
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNL 227
V+L G+ G + + L + + + D V W +LL A G+L
Sbjct: 209 VNLYGKCGSIEDCRKLFEFMDRR-DVVSWNSLLSAYAQIGDL 249
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 5/241 (2%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MP +N V W ++I C+ + G EA LF +M G+ P + TL+S+L S ++
Sbjct: 129 FMPERNVVPWTTVIGCYSKMGDVREAFSLFRQMRYEGIQPSSVTLLSLLFGVS---EVPY 185
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H + L NS++N+Y KCG+++ +F M +++VVSWN ++ A A
Sbjct: 186 VQCLHGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQ 245
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G E + + ++M+ GL P F +LS +G + +GR G + G D
Sbjct: 246 IGDLCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRLGRLVHGQILRG-GFVLDAH 304
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+ + +GG + A + ++ + D V+W A++ N + + Q+ +
Sbjct: 305 IETSFIVMYLKGGNINVAFKMFER-SLDKDVVLWTAMISGLVQNENADKALAVFDQMFKF 363
Query: 241 G 241
G
Sbjct: 364 G 364
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 2/219 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M ++ VSWNS++S + Q G E + L RM + G+ P S+LS GD+ L
Sbjct: 227 FMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRL 286
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+ H I + + S + MY K G + A +F K+VV W +I L
Sbjct: 287 GRLVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQ 346
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+ + +A+ +F++M G+ P T +++AC+ G +G+ G + +S D A
Sbjct: 347 NENADKALAVFDQMFKFGMKPSTETMASVITACAQLGAFNLGKSIHGYILRQ-KLSLDTA 405
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
+ +V + + G L ++ + ++ K D V W A++
Sbjct: 406 AHNSLVTMYAKCGHLDQSYIVFDRMS-KRDLVSWNAIVA 443
>Medtr4g068900.1 | PPR containing plant-like protein | HC |
chr4:25858642-25860684 | 20130731
Length = 680
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 172/310 (55%), Gaps = 4/310 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLALGKK 63
+N+V W ++ S + + Q E +LF + ++PD ++ +L +C+ L+LGK+
Sbjct: 356 RNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATLSLGKQ 415
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN--VVSWNVIIGALALH 121
H YI + + L +++++MY+KCG + A F M ++ V+ +NV+I A H
Sbjct: 416 IHTYILRMRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNVMIAGYAHH 475
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +AI++F M + PD +TF LLSAC H GLVE G +F M + + P++ H
Sbjct: 476 GFENKAIQLFHDMLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISMED-YSVLPEINH 534
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YACMVD+ GR L +A+ ++K+P++ DA +WGA L AC+ N + + ++LL++G
Sbjct: 535 YACMVDMYGRANQLEKALEFMRKIPIQIDATIWGAFLNACQINNNTSLVNKAEEELLKIG 594
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
V L+N+Y+ W++M +IRK M KK S I ++ + F D +H
Sbjct: 595 ADTGSRCVQLANVYASEGNWNEMGRIRKKMRVKEAKKLTGCSWIYVENGIHAFTSGDTSH 654
Query: 302 EVSTSIYSMV 311
+ +IYS +
Sbjct: 655 AKADAIYSTL 664
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 119/299 (39%), Gaps = 73/299 (24%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
+ + VSWN++I+ + Q G +A+ LF +M GV D TL S+LS CS + L LGK
Sbjct: 222 ELNDTVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEHTLASVLSVCSGLKHLKLGK 281
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQ---------------------------- 94
H ++ N+ + + + ++++Y KCG ++
Sbjct: 282 CVHAWVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQG 341
Query: 95 ---TAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEK-MRASGLFPDEITFTGLL 150
A +F + ++N V W + A +E ++F K + L PD + +L
Sbjct: 342 EMMKAQRLFDSLLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVL 401
Query: 151 SACSHSGLVEMGRYY-----------------------------------FGLMSSTFGI 175
AC+ + +G+ F LM+
Sbjct: 402 GACATQATLSLGKQIHTYILRMRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDR--- 458
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQ---KLPMKPDAVVWGALLGACKTFGNLEMGK 231
DV Y M+ GF +A+ L K +KPDAV + ALL AC+ G +E G+
Sbjct: 459 DRDVILYNVMIAGYAHHGFENKAIQLFHDMLKKNVKPDAVTFVALLSACRHRGLVEQGE 517
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 145/355 (40%), Gaps = 102/355 (28%)
Query: 5 KNAVSWNSIISCHV-QEGQHAEAMELFCRMCVSGVMP--DNATLVSILSSCSHMGDLALG 61
++ VS+NS++S +V +G EA++LF +M + M D +L ++++ + + + G
Sbjct: 87 RDLVSYNSMLSAYVGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMVNFSAKLRLVCYG 146
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTA------------------------- 96
K+ H Y+ +S +SL+NMY+KCG + A
Sbjct: 147 KQMHSYMVKTASDLSKFASSSLINMYSKCGLFRDACSVVSGFDGVVDLVSKNAMVAACCR 206
Query: 97 ---MDIFFGMPQKN-----VVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
MD+ + KN VSWN +I A +G +A+ +F KM G+ DE T
Sbjct: 207 EGEMDMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEHTLAS 266
Query: 149 LLSACS--------------------------HSGLVEMG------RY----YFGL-MSS 171
+LS CS SG+V++ RY Y G+ + S
Sbjct: 267 VLSVCSGLKHLKLGKCVHAWVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVYAGIGIKS 326
Query: 172 TFGISPDVAHYACMVD----------LLGRGGFLGEAM------------------SLIQ 203
F +S + Y+ + LL R + A+ +
Sbjct: 327 QFAVSSLIVGYSSQGEMMKAQRLFDSLLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVT 386
Query: 204 KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSE 257
+ + PDA++ +LGAC T L +GKQI +L + + D L + +MYS+
Sbjct: 387 REELIPDAMIIIRVLGACATQATLSLGKQIHTYILRMRLKMDKKLLSAMVDMYSK 441
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 39/205 (19%)
Query: 73 ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWN-------------------- 112
T S+ CN L+++Y+K G L+ A +F +P N SWN
Sbjct: 23 FTSSIFTCNQLIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNLTQARAVFD 82
Query: 113 -----------VIIGA-LALHGSGKEAIEMFEKMRASG--LFPDEITFTGLLSACSHSGL 158
++ A + G EA+++F+KM+++ + DE + T +++ + L
Sbjct: 83 SAVDRDLVSYNSMLSAYVGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMVNFSAKLRL 142
Query: 159 VEMGRYYFGLMSSTFGISPDVAHYA--CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGA 216
V G+ M T + D++ +A ++++ + G +A S++ D V A
Sbjct: 143 VCYGKQMHSYMVKT---ASDLSKFASSSLINMYSKCGLFRDACSVVSGFDGVVDLVSKNA 199
Query: 217 LLGACKTFGNLEMGKQILKQLLELG 241
++ AC G ++M + + EL
Sbjct: 200 MVAACCREGEMDMALNVFWKNHELN 224
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 167/282 (59%), Gaps = 3/282 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHA-EAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
K+ V +N++I + + ++A ++E++ M P+ +T SI+ +CS + +G++
Sbjct: 237 KDVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIGEQ 296
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
+ + L ++L++MY+KCG + A +F M +KNV SW +I +G
Sbjct: 297 VQAQLMKTPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGKNGF 356
Query: 124 GKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
EA+E+F+KM+ + P+ +TF L+AC+H+GLVE G F M S + + P + HY
Sbjct: 357 PDEALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRMEHY 416
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
ACMVDLLGR G+L +A + ++P +P++ VW ALL +C+ GN+EM K +L +L
Sbjct: 417 ACMVDLLGRAGWLNQAWEFVTRMPERPNSDVWLALLSSCRIHGNIEMAKLAANELFKLNA 476
Query: 243 Y-DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAIS 283
Y G YV LSN +++ +WD++ ++R++M + GI K A S
Sbjct: 477 YGRPGAYVALSNTLADAGKWDNVSELREVMKEKGISKDTACS 518
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 45/266 (16%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSH------MGDLALGK 62
++N +I +++ GQ E+++LF ++ VSG PD T IL + ++ +GDL G+
Sbjct: 105 AYNYMIGGYLKNGQVDESLDLFHQLSVSGEKPDGFTFSMILKASTNRVSNGMVGDL--GR 162
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H I ++ LC +L++ Y K G + +F M +KNV+S +I G
Sbjct: 163 MVHAQILKFDVEKDDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYMNKG 222
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+A +F K L D + F ++ S V+ Y
Sbjct: 223 FFDDAEYIFRKT----LDKDVVVFNAMIEGYS-----------------------KVSEY 255
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
A M L E +Q+L +P+ + +++GAC E+G+Q+ QL++
Sbjct: 256 A-MRSL--------EVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIGEQVQAQLMKTPF 306
Query: 243 YDS-GLYVLLSNMYSESQRWDDMKKI 267
+ L L +MYS+ R D +++
Sbjct: 307 FAVIKLGSALIDMYSKCGRVIDAQRV 332
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+K H +I + + L+ +Y K +L+ A +F + + + ++N +IG
Sbjct: 56 GQKIHSHILKTGFVPNTNISIKLLILYIKSHSLRYARQVFDDLHDRTLSAYNYMIGGYLK 115
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH---SGLV-EMGR 163
+G E++++F ++ SG PD TF+ +L A ++ +G+V ++GR
Sbjct: 116 NGQVDESLDLFHQLSVSGEKPDGFTFSMILKASTNRVSNGMVGDLGR 162
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 162/282 (57%), Gaps = 5/282 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN VSW +++ + Q ++ ++L G + A + +L +CS + + GK+
Sbjct: 322 KNNVSWTAMLGVYCQNKEYQNVLDLVRE---RGDLNFYAFGI-VLRACSGLAAVNHGKEV 377
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + V + ++L+++YAKCG + A +F M +N+++WN ++ A +G G
Sbjct: 378 HCMYVRKGGSKDVIIESALVDLYAKCGMVDFACTMFASMEVRNLITWNSMVSGFAQNGRG 437
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA+ +FE M G+ PD ITF +L ACSH+GLV+ GR F LM +GI P V HY C
Sbjct: 438 VEALALFEDMIKEGIKPDSITFVAVLFACSHAGLVDEGRKVFTLMGE-YGIKPVVEHYNC 496
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
M+DLLGR GF+ EA L++ + D +W ALLGAC + +++ ++++EL
Sbjct: 497 MIDLLGRAGFIDEAECLLENADCRYDKSLWAALLGACTKCSDYRTAERVARKMIELEPDF 556
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
YVLL+N+Y E RWDD +IRK+M D G+KK S I+
Sbjct: 557 HLSYVLLNNIYREVGRWDDALEIRKLMEDRGVKKMAGKSWID 598
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ VK+ +SW S+IS + + +++ LF M V P+ TL S++ +CS + D+ LG
Sbjct: 114 LHVKDVISWTSLISGYTRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIKACSALNDVNLG 173
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALAL 120
+ H + + + SL++MY A+ A +F + K +V W II
Sbjct: 174 RCFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVFCWTSIISCFTR 233
Query: 121 HGSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+ KE+++ F M R G+ PD TF +L+AC++ GL+ G+ G + G +V
Sbjct: 234 NDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQGKEVHGKVVG-LGFGGNV 292
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
+ ++D+ G+ G + + + ++L + + V W A+LG
Sbjct: 293 VVESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLG 332
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V+N ++WNS++S Q G+ EA+ LF M G+ PD+ T V++L +CSH G + G
Sbjct: 416 MEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEGIKPDSITFVAVLFACSHAGLVDEG 475
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTA 96
+K + + I V N ++++ + G + A
Sbjct: 476 RKVFTLMGEYGIKPVVEHYNCMIDLLGRAGFIDEA 510
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 11/247 (4%)
Query: 2 MPVKNA---VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL 58
+PVK +S +S I H++ G + A+ L + S+L +
Sbjct: 8 LPVKQTHSFISTDSEILHHLKTGSLSHAIHLL-NTSQPTLSLKPVIYASLLQTSVKTNSF 66
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGA---LQTAMDIFFGMPQKNVVSWNVII 115
G H ++ + + + NSL+ +Y K L A +F + K+V+SW +I
Sbjct: 67 HHGASVHAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSHARHLFDSLHVKDVISWTSLI 126
Query: 116 GALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI 175
++I +F +M A + P+ T + ++ ACS V +GR F M T G
Sbjct: 127 SGYTRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIKACSALNDVNLGR-CFHSMVLTRGF 185
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
+ ++D+ G + +A + +L +K D W +++ F +M K+ LK
Sbjct: 186 DWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVFCWTSIISC---FTRNDMFKESLK 242
Query: 236 QLLELGR 242
+ R
Sbjct: 243 FFYVMNR 249
>Medtr5g025580.1 | PPR containing plant-like protein | HC |
chr5:10385696-10382561 | 20130731
Length = 767
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 159/285 (55%), Gaps = 4/285 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
+ N +WN +IS + EA+ELF + P+ T+VS+LS+C+ +G L GK
Sbjct: 484 SISNLCTWNCMISALSHNKESREALELFRHL---QFKPNEFTIVSVLSACTRIGVLIHGK 540
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ H Y + + +L+++Y+ CG L A+ +F QK+ +WN +I A HG
Sbjct: 541 QVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVF-RHSQKSESAWNSMIAAYGNHG 599
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+G++AIE+F +M G+ + TF LLSACSHSGLV G Y+ M +GI P+ H
Sbjct: 600 NGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGLVNQGLQYYECMLEKYGIKPEAEHQ 659
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
+V++L R G + EA + L + VWG LL C G LE+GK++ ++L E+
Sbjct: 660 VYVVNMLARSGRIDEAYQFTKGLQSNASSGVWGMLLSVCNYHGELELGKKVAEKLFEMEP 719
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEI 287
+ G Y+ L+NMY + W D +R+ ++D G++KC S I++
Sbjct: 720 QNVGYYISLANMYVAAGSWKDATDLRQYIHDQGLRKCAGYSLIDV 764
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 125/299 (41%), Gaps = 41/299 (13%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
VSWN++IS + Q + +A LF + G ++T+ +ILSSC+ L GK H +
Sbjct: 285 VSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIW 344
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN-----VVSWNVIIGALALHG 122
+ L NSLM MY G L + F + Q+N + SWN II
Sbjct: 345 QLKSGFLNHTLLVNSLMQMYINSGDLTSG----FSILQENSSIADIASWNTIIVGCVRGD 400
Query: 123 SGKEAIEMFEKMRASGLFP-DEITFTGLLSACSHSGLVEMGRYYFGL-MSSTFGISPDVA 180
+EA+E F MR F D IT +LSA ++ L+ G+ L + S FG V
Sbjct: 401 QFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQ 460
Query: 181 H-----------------------------YACMVDLLGRGGFLGEAMSLIQKLPMKPDA 211
+ + CM+ L EA+ L + L KP+
Sbjct: 461 NSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREALELFRHLQFKPNE 520
Query: 212 VVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKIRK 269
++L AC G L GKQ+ G + +S + L ++YS R D+ K+ +
Sbjct: 521 FTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVFR 579
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 12/260 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ VSWNSI+ + G +++ F RM S D+ +L +S+CS +G+LA G
Sbjct: 73 MEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAFG 132
Query: 62 KKAHDY-----ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
+ H DN+ V++ NSL+++Y++C A+ A +F M K++VSWN ++
Sbjct: 133 ECIHGQGIKLGYKDNSF---VSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMME 189
Query: 117 ALALHGSGKEAIEMFEKMRASGLF-PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI 175
A + + EA ++ +M+ +G F PD +T T +L C+ L GR G +
Sbjct: 190 GYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMV 249
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
+ ++D+ + + +A L + D V W A++ E + + K
Sbjct: 250 PDHLPLRNGLIDMYSKCNVVEKAELLFHSTA-QIDLVSWNAMISGYSQNKYYEKAQNLFK 308
Query: 236 QLLELGR--YDSGLYVLLSN 253
+LL G+ S ++ +LS+
Sbjct: 309 ELLCCGQNCSSSTVFAILSS 328
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 7/240 (2%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMP-DNATLVSILSSCSHMGDLALG 61
+ + SWN+II V+ Q EA+E F M D+ TLV++LS+ +++ L G
Sbjct: 382 SIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQG 441
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + + NSL+ MY +C + +A +F N+ +WN +I AL+ +
Sbjct: 442 KSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHN 501
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+EA+E+F ++ P+E T +LSAC+ G++ G+ G + +G +
Sbjct: 502 KESREALELFRHLQ---FKPNEFTIVSVLSACTRIGVLIHGKQVHGY-TFRYGYQQNSFI 557
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
A +VDL G L A+ + + A W +++ A GN E ++ ++ +LG
Sbjct: 558 SAALVDLYSTCGRLDNAVKVFRHSQKSESA--WNSMIAAYGNHGNGEKAIELFHEMCDLG 615
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 107/215 (49%), Gaps = 4/215 (1%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMD-- 98
D+ TL+ ++S+ SH+ + G+ H + + V ++LCN+L+NMYAKCG + ++
Sbjct: 9 DSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSEC 68
Query: 99 IFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGL 158
+F M K+VVSWN I+ +G ++++ F +M S D ++ + +SACS G
Sbjct: 69 LFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGE 128
Query: 159 VEMGRYYFGL-MSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGAL 217
+ G G + + + V+ ++ L + + A ++ +++ K D V W A+
Sbjct: 129 LAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYK-DIVSWNAM 187
Query: 218 LGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLS 252
+ + N+ ++ ++ G + + L +
Sbjct: 188 MEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTT 222
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
M K+ VSWN+++ + EA +L M +G PD TL ++L C+ +
Sbjct: 176 MAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYRE 235
Query: 61 GKKAHDY-ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G+ H Y I + + + L N L++MY+KC ++ A +F Q ++VSWN +I +
Sbjct: 236 GRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYS 295
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF------GLMSSTF 173
+ ++A +F+++ G T +LS+C+ + + G+ G ++ T
Sbjct: 296 QNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTL 355
Query: 174 GISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
++ ++ + G L S++Q+ D W ++ C
Sbjct: 356 LVNS-------LMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGC 396
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/284 (35%), Positives = 157/284 (55%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K+ SW + +Q G+ A+ + +M GV P+ TL + L++C+ + + G
Sbjct: 220 IPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEG 279
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H V V + N+L++MYAKCG + +A +F ++VVSW +I A A +
Sbjct: 280 KQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQN 339
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EA+++F++M+ + + P+ ITF +L ACS G V+ G Y M +GI P H
Sbjct: 340 GQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDH 399
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMV +LGR G + EA LI ++P P VW LL AC+ G++E GK + ++
Sbjct: 400 YICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQIHGDVETGKLAAEHAIKHD 459
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI 285
+ D YVLLSNM +E+ WD + +R++M +KK S I
Sbjct: 460 KNDPSSYVLLSNMLAETSNWDCVVSLRELMETRNVKKVPGSSWI 503
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 112/238 (47%), Gaps = 5/238 (2%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCR-MCVSGVMPDNATLVSILSSCSHMGDLALG 61
P+++ V+WN+++ +++ +E + +F R M GV PD T S L+ + + L +G
Sbjct: 121 PIRDTVTWNTMMGGYLEFS--SEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMG 178
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + + + NSL++MY K L+ F +P K+V SW +
Sbjct: 179 MQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQW 238
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G + A+ + KM+ G+ P++ T L+AC+ +E G+ + GL G DV
Sbjct: 239 GEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGL-RIKLGSDVDVCV 297
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D+ + G + A ++ + + V W ++ AC G QI ++ E
Sbjct: 298 DNALLDMYAKCGCMDSAWTVFRSTNSR-SVVSWTTMIMACAQNGQPGEALQIFDEMKE 354
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 86 MYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF-PDEI 144
MY KC L +A+ +F MP++NVVSW+ ++ +G +A+ +F M G P+E
Sbjct: 1 MYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEF 60
Query: 145 TFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
TF L ACS S V + L+ + G+ +V + L R G L EA+ + +
Sbjct: 61 TFVSALQACSLSENVTQAYQIYSLVVRS-GLECNVFLLNAFLTALVRNGKLTEALQIFET 119
Query: 205 LPMKPDAVVWGALLGACKTFGNLEM 229
P++ D V W ++G F + ++
Sbjct: 120 SPIR-DTVTWNTMMGGYLEFSSEQI 143
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 174/303 (57%), Gaps = 3/303 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLAL 60
MP KN ++W ++++ +VQ G EA++LF +M + G+ P T V++L +CS + L
Sbjct: 289 MPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPE 348
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFF-GMP-QKNVVSWNVIIGAL 118
G++ H I S + ++L+NMY+KCG A +F G+ ++++WN +I A
Sbjct: 349 GQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAY 408
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
A HG G EAI +F KM+ G +++T+ GLL+ACSH+GL + G YF + I
Sbjct: 409 AHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVR 468
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
HY C++DL GR G L EA+++I+ L + +WGALL C GN ++GK + ++L
Sbjct: 469 EDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHGNADIGKLVADKVL 528
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
++ ++ Y+L SNMY+ ++ +R M G+KK S I++ F+V+D
Sbjct: 529 KMEPENADTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPGCSWIDVGNTVQVFVVND 588
Query: 299 KNH 301
K+H
Sbjct: 589 KSH 591
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 118/278 (42%), Gaps = 76/278 (27%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP++N VSWN++I+ + Q G+ EA++LF RM MP
Sbjct: 227 MPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERD-MPS-------------------- 265
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
N+++ + + G L A +F MPQKNV++W ++ H
Sbjct: 266 ------------------WNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQH 307
Query: 122 GSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMS------STFG 174
G +EA+++F KM+A+ GL P TF +L ACS + G+ ++S ST+
Sbjct: 308 GLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYV 367
Query: 175 ISP--------------------------DVAHYACMVDLLGRGGFLGEAMSL---IQKL 205
+S D+ + M+ G+ EA++L +Q+L
Sbjct: 368 VSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQEL 427
Query: 206 PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
+ + V + LL AC G + G + +LL+ RY
Sbjct: 428 GFQANDVTYVGLLTACSHAGLFDEGFKYFDELLK-NRY 464
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 114/234 (48%), Gaps = 19/234 (8%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +++ W ++IS +++ G EA +LF R PD V + ++ G + +
Sbjct: 71 MSKRDSCLWTTMISGYIKCGLINEARKLFDR-------PDAQKSVIVWTAMVS-GYIKMN 122
Query: 62 KKAHDYICDNNITV-SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ N + V +V N++++ YA+ G Q A+D+F MP++NVVSWN ++ ALA
Sbjct: 123 RIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMTALAH 182
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G +A +F +MR D +++T +++ S +G V+ R F M +V
Sbjct: 183 CGRIDDAERLFNEMRER----DVVSWTTMVAGLSKNGRVDAAREVFDKMPIR-----NVV 233
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
+ M+ + G EA+ L +++P + D W ++ G+L +Q+
Sbjct: 234 SWNAMIAGYAQNGRFDEALKLFERMPER-DMPSWNTMVTGFIQNGDLNRAEQLF 286
>Medtr2g028240.1 | PPR containing plant-like protein | HC |
chr2:10416867-10418417 | 20130731
Length = 516
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 152/273 (55%), Gaps = 10/273 (3%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
NS++S ++ G++ EA ++ +S V P+ L S+L CS DL GK+ H
Sbjct: 229 NSLVSGCIKNGRYREAFKV-----MSLVKPNAVALTSVLVCCSEESDLLTGKQVHCVAVR 283
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEM 130
T LCN L++MYAKCG + A +F G+ QK+V+SW +I +G G EA+E+
Sbjct: 284 QGFTFETQLCNVLLDMYAKCGKILQAWSVFDGIFQKDVISWTCMIDGYGRNGCGYEAVEL 343
Query: 131 FEKMRASG--LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
F KM G + P+ +TF +LSAC HSGLVE G+ F +M +GI P+ HYAC +D+
Sbjct: 344 FWKMMEDGSEVLPNSVTFLSVLSACGHSGLVEEGKQCFNIMKEKYGIDPEPEHYACFIDI 403
Query: 189 LGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
LGR G + E S Q + P A VW +LL AC + E G+ K LL+L +
Sbjct: 404 LGRAGKIEEVWSAYQNMIDQGTSPTAGVWISLLNACSLGQDFERGEFAAKSLLQLEPNKA 463
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
VL SN Y+ RWD + ++R +M + G+ K
Sbjct: 464 SNIVLASNFYAAIGRWDCVGELRSMMREKGLVK 496
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 42/271 (15%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V+WN+++SC ++ G+ EA+ + M V TL S+L C+ + L G++
Sbjct: 122 RDVVAWNTLLSCFLRCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCASLKALEFGRQV 181
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALALHGS 123
H + + V L +L++ Y+ G + A+++F+G+ K+ + N ++ +G
Sbjct: 182 HGLVVAMGRDL-VVLSTALIDFYSSVGCVHHALNVFYGLKGWKDDMIHNSLVSGCIKNGR 240
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG--------RYYFGLMS----- 170
+EA ++ ++ P+ + T +L CS + G R F +
Sbjct: 241 YREAFKVMSLVK-----PNAVALTSVLVCCSEESDLLTGKQVHCVAVRQGFTFETQLCNV 295
Query: 171 ---------------STF-GI-SPDVAHYACMVDLLGRGGFLGEAMSLIQKL-----PMK 208
S F GI DV + CM+D GR G EA+ L K+ +
Sbjct: 296 LLDMYAKCGKILQAWSVFDGIFQKDVISWTCMIDGYGRNGCGYEAVELFWKMMEDGSEVL 355
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
P++V + ++L AC G +E GKQ + E
Sbjct: 356 PNSVTFLSVLSACGHSGLVEEGKQCFNIMKE 386
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 8/225 (3%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
NS+I+ +++ G A LF + + D+ T +L +LGK+ H +
Sbjct: 31 NSLITSYIRRGHPISAFNLFLSLRRIRIDLDSHTFTPLLRP----SPTSLGKQLHSQMIK 86
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEM 130
+L++MY++ G+L +++ +F M ++VV+WN ++ G EAI +
Sbjct: 87 TGSDSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRV 146
Query: 131 FEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD-VAHYACMVDLL 189
+M + E T +L C+ +E GR GL+ + D V ++D
Sbjct: 147 LREMGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLV---VAMGRDLVVLSTALIDFY 203
Query: 190 GRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
G + A+++ L D ++ +L+ C G +++
Sbjct: 204 SSVGCVHHALNVFYGLKGWKDDMIHNSLVSGCIKNGRYREAFKVM 248
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 155/281 (55%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K+ V+W+S+I+ + G A LF M G+ D+ + +L +CS + G
Sbjct: 403 LPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHG 462
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + +L++MYAKCG ++ A+ +F + + + +SW II A +
Sbjct: 463 KQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQN 522
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EAI + KM SG P++IT G+L+AC HSGLVE F + + G+ P H
Sbjct: 523 GRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEH 582
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVD+LG+ G EA+ LI ++P KPD +W +LLGAC T+ N ++ + + LL
Sbjct: 583 YNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATS 642
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAI 282
D +Y++LSN+Y+ WD + K+R+ + G K+ I
Sbjct: 643 PEDVSVYIMLSNVYAALGMWDSVSKVRETVKKIGKKRAGKI 683
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 118/241 (48%), Gaps = 2/241 (0%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WNS++S HV G + EA+ + M SGV D T +L C + +L+L + H ++
Sbjct: 310 WNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVI 369
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + + + L+++YAK G++ A+ +F +P K+VV+W+ +I A GS K A
Sbjct: 370 TSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFS 429
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLL 189
+F M GL D + +L ACS + G+ L G + ++D+
Sbjct: 430 LFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKK-GYESEGVVTTALIDMY 488
Query: 190 GRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV 249
+ G + +A+SL L + D + W +++ C G E +L +++E G + + +
Sbjct: 489 AKCGDIEDALSLFGCLS-EIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITI 547
Query: 250 L 250
L
Sbjct: 548 L 548
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 117/245 (47%), Gaps = 8/245 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP + VSWNSII+ V + A+ M G+ D T S+L +C +L LG
Sbjct: 197 MPEPDIVSWNSIIAGLVDNAS-SRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLG 255
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS-----WNVIIG 116
++ H YI + S ++L++MY+ C L A IF + + VS WN ++
Sbjct: 256 REIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLS 315
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
++G EA+ M M SG+ D TF+ +L C + + + G + ++ G
Sbjct: 316 GHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITS-GYE 374
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
D + ++D+ + G + A+ L ++LP K D V W +L+ C FG+ ++ +
Sbjct: 375 LDCVVGSILIDIYAKQGSINNALRLFERLPDK-DVVAWSSLITGCARFGSDKLAFSLFMD 433
Query: 237 LLELG 241
++ LG
Sbjct: 434 MIHLG 438
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 124/301 (41%), Gaps = 69/301 (22%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVS-ILSSCSHMGDLAL 60
MP +N VSW +++S EA+ L+ M S + N L S +L +C + ++ L
Sbjct: 64 MPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVEL 123
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK H +I + V + L N+L++MY KCG+L+ A +F +P KN SWN +I A
Sbjct: 124 GKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAK 183
Query: 121 HGSGKEAIEMFEK------------------------------MRASGLFPDEITFTGLL 150
G +A+++F+K M GL DE TF +L
Sbjct: 184 QGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVL 243
Query: 151 SACSHSGLVEMGRYYF------GLMSSTFGISPDVAHYAC---------MVDLLGRGGFL 195
AC S + +GR G SS + IS + Y+ + D R +
Sbjct: 244 KACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSV 303
Query: 196 GEAMSL--------------IQKLPM---------KPDAVVWGALLGACKTFGNLEMGKQ 232
E+++L ++ L M + D + +L C F NL + Q
Sbjct: 304 SESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQ 363
Query: 233 I 233
+
Sbjct: 364 V 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 52 CSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSW 111
C + K H +I + + + N+++++Y+KC ++ A ++F MP +N+VSW
Sbjct: 13 CIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSW 72
Query: 112 NVIIGALALHGSGKEAIEMFEKMRASGLF-PDEITFTGLLSACSHSGLVEMGR-YYFGLM 169
++ L EA+ ++ +M S + P++ ++ +L AC VE+G+ ++ +
Sbjct: 73 TTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIF 132
Query: 170 SSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEM 229
+ + D+ ++D+ + G L +A + ++P K +A W L+ G ++
Sbjct: 133 QAKLDV--DIVLMNALLDMYVKCGSLRDAQRVFCEIPCK-NATSWNTLILGYAKQGLIDD 189
Query: 230 GKQILKQLLE--LGRYDSGLYVLLSNMYSESQRWDDM 264
++ ++ E + ++S + L+ N S + R+ M
Sbjct: 190 AMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSM 226
>Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:15006779-15004629 | 20130731
Length = 675
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 166/319 (52%), Gaps = 35/319 (10%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCV--SGVMPDNATLVSILSSCSHMGDLALGKK 63
N SWN + G A++LF M + ++P++ T+ +L SC+ + L GK+
Sbjct: 301 NGGSWNRFVX-----GDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALKFGKQ 355
Query: 64 AHDYICDNNITVSVTL--CNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H ++ + + S L N L++MY+K G + TA +F M ++N VSW ++ +H
Sbjct: 356 IHAHVLRRSHSNSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMH 415
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++A +F++MR L D ITF +L AC H
Sbjct: 416 GRSEDAFRVFDEMRKEALVLDGITFLVVLYACKH-------------------------- 449
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YACMVDLLGR G LGEAM LI +P++P VVW ALL AC+ N E+ + K+LLEL
Sbjct: 450 YACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELK 509
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ G Y LLSN+Y+ ++RW D+ +I +M +GIKK S ++ F V D+ H
Sbjct: 510 ADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTH 569
Query: 302 EVSTSIYSMVDQLMDHLKS 320
S IY + L+ +K+
Sbjct: 570 LQSQKIYETLADLIKRIKA 588
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 121/225 (53%), Gaps = 13/225 (5%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V+W+S+IS + Q G EAM++F +MC P+ L+S+LS+C+ +G L GK+ H
Sbjct: 50 DVVTWSSVISGYAQRGFGCEAMDVFRKMCGCRCRPNVVKLMSLLSACASVGALLHGKETH 109
Query: 66 DYICD-------NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM--PQKNVVSWNVIIG 116
Y N+ + + N+L++MYAKC +L+ A +F + ++VV+W V+IG
Sbjct: 110 CYSVKFILKGEHNDDNDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIG 169
Query: 117 ALALHGSGKEAIEMFEKMRA--SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
A +G A+++F +M + + P++ T + +L +C+ + G++ +
Sbjct: 170 GYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSL 229
Query: 175 ISPDVAHYA-CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
I DV A C++D+ + G + A + + K +A+ W +LL
Sbjct: 230 IYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAISWTSLL 273
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 120/271 (44%), Gaps = 39/271 (14%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCV--SGVMPDNATLVSILSSCSHMGDLALGK 62
++ V+W +I + Q G A++LF M + ++P++ T+ +L SC+ + L GK
Sbjct: 159 RDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMSCARLSALIFGK 218
Query: 63 KAHDYICDNNITVSVTL--CNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
H Y+ ++ S L N L++MY+K G + TA +F M ++N +SW ++ +
Sbjct: 219 HIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGM 278
Query: 121 HGSGKEAIEMFEKMRASGL---------------------------------FPDEITFT 147
HG ++A +F++MR L P++ T +
Sbjct: 279 HGCSEDAFRVFDEMRKEALSFGNGGSWNRFVXGDANHALQLFSEMFKIDNCIVPNDFTIS 338
Query: 148 GLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA-CMVDLLGRGGFLGEAMSLIQKLP 206
+L +C+ ++ G+ + + DV A C++D+ + G + A + +
Sbjct: 339 CVLMSCARLSALKFGKQIHAHVLRRSHSNSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS 398
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
K +AV W +LL G E ++ ++
Sbjct: 399 -KRNAVSWTSLLTGYGMHGRSEDAFRVFDEM 428
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 188 bits (477), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 149/252 (59%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ W +IS V ++ EA+ + RM G P+ T+ S+L++ + + L G +
Sbjct: 249 KDDFVWTVLISGFVSNEEYEEALCWYVRMNREGCKPNPLTISSVLAASASLVALNEGLQI 308
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ N+ +++ NSL++ YAKCG + A IF + + NVVS N +I +G G
Sbjct: 309 HSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVELNVVSNNSVINGFTQNGFG 368
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+EA+ M+++M+ L P+ +TF +LSAC+H+GL+E GR F M S + PD HYAC
Sbjct: 369 EEALNMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGRNLFDTMKSRYRNEPDADHYAC 428
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLLGR G L EA LI+ + +KP + VWGALL A L++ K + + +L +
Sbjct: 429 MVDLLGRAGLLDEANDLIRSITVKPHSGVWGALLAASSAHLRLDLAKLAAQHITKLEPAN 488
Query: 245 SGLYVLLSNMYS 256
+ YV+LSN+YS
Sbjct: 489 ATPYVVLSNLYS 500
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 122/284 (42%), Gaps = 48/284 (16%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSI-LSSCSHMGDLAL 60
MP +N VSW+++I ++++G F M GV+ N+T ++I + C + G +
Sbjct: 130 MPERNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGNCGGVKD 189
Query: 61 GKKAHDYI-------CDNNITV-------SVTLCNSLMNMYAKCGALQTAMDIFFGMPQK 106
G + H + D V + +++ + G + +++F + +K
Sbjct: 190 GMQIHGLVSRLGFEFVDAAYEVFERMPEKDLISWTAMIRRFVTDGRMGKPVELFDTLKEK 249
Query: 107 NVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-----------H 155
+ W V+I + +EA+ + +M G P+ +T + +L+A + H
Sbjct: 250 DDFVWTVLISGFVSNEEYEEALCWYVRMNREGCKPNPLTISSVLAASASLVALNEGLQIH 309
Query: 156 SGLVEMGRYYF--------------GLMSSTFGISPDVAHYAC-----MVDLLGRGGFLG 196
S +++M Y G ++ + I DV +++ + GF
Sbjct: 310 SHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVELNVVSNNSVINGFTQNGFGE 369
Query: 197 EAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
EA+++ +++ ++P+ V + A+L AC G +E G+ + +
Sbjct: 370 EALNMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGRNLFDTM 413
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 106/257 (41%), Gaps = 42/257 (16%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCS--HMGDLA 59
M KN V+W +++ + + GQ A +LF +M NA + + H+ +
Sbjct: 1 MSQKNIVTWTAMLVVYAKNGQIINARKLFDKMPERTTATYNAMISGYILKARKFHLAEEL 60
Query: 60 LGK---KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF--FGMPQKNVVSWNVI 114
+ + D +C N+LMN Y K G A+ +F G +++VVSW+ +
Sbjct: 61 YREVPCEFRDPVC----------SNALMNGYLKIGETNEALRVFENVGESKRDVVSWSAV 110
Query: 115 IGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
+ L G A ++F++M + ++++ ++ GL E G +F M
Sbjct: 111 VVGLCRDGRIGYARKLFDRMPERNV----VSWSAMIDGYMEKGLFENGFGFFLEMRREGV 166
Query: 175 ISPDVAHYACMVD----------------LLGRGG--FLGEAMSLIQKLPMKPDAVVWGA 216
+ + M+ L+ R G F+ A + +++P K D + W A
Sbjct: 167 VEVNSTTMTIMIKGCGNCGGVKDGMQIHGLVSRLGFEFVDAAYEVFERMPEK-DLISWTA 225
Query: 217 LLGACKTFGNLEMGKQI 233
++ T G MGK +
Sbjct: 226 MIRRFVTDG--RMGKPV 240
>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:874317-871628 | 20130731
Length = 505
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 177/323 (54%), Gaps = 8/323 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMC--VSGVMPDNATLVSILSSCSHMGDLALGK 62
+++ +WN +IS + G ++EA+ F M +G+ D+ TL SILS+C GDL K
Sbjct: 166 RDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNGIELDHMTLPSILSACGKEGDLLKVK 225
Query: 63 KAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H +I N + N+L++ Y KCG+L+ + +IF + N+V+W +I +H
Sbjct: 226 EVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFKTVCYVNLVTWTTMISCYGMH 285
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+E++ +FEKM G P+ +T T +L++CSH GL++ G+ FG M S +G+ P H
Sbjct: 286 GKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHCGLLDQGKKIFGSMISDYGLEPTAEH 345
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAV---VWGALLGACKTFGNLEMGKQILKQLL 238
YACMVDL R G L EA+ L+++ MK +V +WGALL C N+++G+ L
Sbjct: 346 YACMVDLFSRCGRLEEALQLLER--MKSSSVTGSMWGALLAGCVMHQNVKIGEVAAHHLF 403
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
+L ++ YV L +Y + IR M D G+ K S I I G ++F D
Sbjct: 404 QLEPNNTSNYVALWGIYQSRGMVLGVSTIRGKMRDLGLVKTPGCSWINIAGRAHKFYQGD 463
Query: 299 KNHEVSTSIYSMVDQLMDHLKSV 321
+H +S I V ++ + L S
Sbjct: 464 LSHPLSHIICKRVYEISNTLLST 486
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 131/318 (41%), Gaps = 47/318 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N SWN +I+ + + +A+ +F GV+PD TL + + + LG
Sbjct: 61 MPQRNMHSWNIMIASYTHNSMYFDALTVFEAFKRCGVLPDCYTLPPLFKISIRIDECCLG 120
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM-PQKNVVSWNVIIGALAL 120
H + V + NS++ Y KCG + A+ +F ++ +WN++I
Sbjct: 121 WMCHGLVVKLGYEEIVVVNNSVLEFYVKCGTMSQALSVFSNHNAPRDSATWNLMISGFGK 180
Query: 121 HGSGKEAIEMFEKM--RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G EA+ F +M +G+ D +T +LSAC G + + G + FG D
Sbjct: 181 AGLYSEAVHCFREMLKYRNGIELDHMTLPSILSACGKEGDLLKVKEVHGFIVRNFGFDAD 240
Query: 179 VAHYACMVDLLGRGGFLG-------------------------------EAMSLIQKL-- 205
++D G+ G L E++ L +K+
Sbjct: 241 APIGNALIDNYGKCGSLKDSENIFKTVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMMD 300
Query: 206 -PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL------YVLLSNMYSES 258
+P+AV A+L +C G L+ GK+I ++ D GL Y + +++S
Sbjct: 301 EGFRPNAVTLTAILASCSHCGLLDQGKKIFGSMIS----DYGLEPTAEHYACMVDLFSRC 356
Query: 259 QRWDDMKKIRKIMNDSGI 276
R ++ ++ + M S +
Sbjct: 357 GRLEEALQLLERMKSSSV 374
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 100/229 (43%), Gaps = 10/229 (4%)
Query: 45 LVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP 104
L S+L +C ++ + H ++ +V L L+ Y K G + A +F MP
Sbjct: 6 LSSLLRTCKTHSTVS---QCHAQTLLQSLLPNVILETDLLLAYTKLGLISHARKLFDKMP 62
Query: 105 QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY 164
Q+N+ SWN++I + + +A+ +FE + G+ PD T L +G
Sbjct: 63 QRNMHSWNIMIASYTHNSMYFDALTVFEAFKRCGVLPDCYTLPPLFKISIRIDECCLGWM 122
Query: 165 YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTF 224
GL+ G V +++ + G + +A+S+ D+ W ++ F
Sbjct: 123 CHGLVVK-LGYEEIVVVNNSVLEFYVKCGTMSQALSVFSNHNAPRDSATWNLMISG---F 178
Query: 225 GNLEMGKQILKQLLELGRYDSGL---YVLLSNMYSESQRWDDMKKIRKI 270
G + + + E+ +Y +G+ ++ L ++ S + D+ K++++
Sbjct: 179 GKAGLYSEAVHCFREMLKYRNGIELDHMTLPSILSACGKEGDLLKVKEV 227
>Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:36649387-36650467 | 20130731
Length = 316
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 137/233 (58%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K +NS+I ++ E + LF M +S D TL +L SC+ + L LGK+
Sbjct: 72 KPTFLYNSLIRAYLSLNLFKETLSLFREMRLSYKPFDCHTLPLVLKSCAGLSALRLGKQV 131
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + N + + N+L+NMYAKCG L+ A +F GM ++N V+W+ ++ +HG
Sbjct: 132 HGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDGMCERNEVTWSTMMADFGMHGRF 191
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+E EMF +M G D ++FT +L+ACSH G VE GR F +M FG+ PDV HY C
Sbjct: 192 EEVFEMFNRMVEVGERMDSVSFTVVLTACSHGGFVEKGREIFEIMKVRFGVKPDVRHYTC 251
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
MVD+LGR G + EA L K+ ++PD + GAL GACKT G +++ +++ ++
Sbjct: 252 MVDMLGRVGLVEEAEKLTLKMDVRPDEALVGALFGACKTHGRVDVAERVAEKF 304
>Medtr2g019350.1 | PPR containing plant-like protein | HC |
chr2:6301271-6304315 | 20130731
Length = 601
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 149/269 (55%), Gaps = 6/269 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V WN +I + + EA+ L M GV P+++TLV +LS S G + +
Sbjct: 275 KDVVLWNCLIKNYARSCLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSMQGVRYV 334
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
I + + + V L +L+++YAKCG L AM+IF M K+V SW +I +HG
Sbjct: 335 TSLIEEEKLELDVILGTALVDVYAKCGFLDEAMEIFERMENKDVKSWTAVISGHGIHGQA 394
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
AI +F +M G P+EITF +L+ACSH GLV G +F M G SP V HY C
Sbjct: 395 INAISLFNRMENEGFRPNEITFLAILTACSHGGLVTEGVEFFKRMVQEHGFSPWVEHYGC 454
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMG---KQILKQLLELG 241
++DLLGR G L EA LI+ LP+K DA W LL AC+ G++++G K +L
Sbjct: 455 LIDLLGRAGMLHEAFELIKSLPIKGDATSWRTLLSACRVHGDVKLGECVKDVLSNFYTPH 514
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKI 270
DS +L+S Y+ + R D+ +++++
Sbjct: 515 PTDS---LLISGTYAAAGRISDLTRMQEM 540
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 3/217 (1%)
Query: 3 PVKN-AVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
P +N VSWN ++ V ++ +LF + SG+ AT +S+LS+ +G LG
Sbjct: 171 PERNDLVSWNILMGGCVLVSDYSFVFDLFLKRGCSGIRASVATTLSLLSAAGDIGSFVLG 230
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H Y ++ + +L++MYAK G + A +F G+ +K+VV WN +I A
Sbjct: 231 KSLHGYCIKIGFCCNLNVVTALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLIKNYARS 290
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+EA+ + + MR G+ P+ T GLLS S SG ++ RY L+ + DV
Sbjct: 291 CLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSMQGVRYVTSLIEEE-KLELDVIL 349
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+VD+ + GFL EAM + +++ K D W A++
Sbjct: 350 GTALVDVYAKCGFLDEAMEIFERMENK-DVKSWTAVI 385
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 132/315 (41%), Gaps = 37/315 (11%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N +N+++ + +A+ +F ++ SG D + ++++ +C ++ G+ H
Sbjct: 73 NLFMYNTMLRGYSVSNSSNKALPIFNKLRNSGNGLDPFSFIAVMKACGRSFEVGFGRGVH 132
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN-VVSWNVIIGALALHGSG 124
+ + V L N+++ Y CG + A +F P++N +VSWN+++G L
Sbjct: 133 GIVVKSGNRFFVDLNNTILQFYCVCGRIDDARKVFDECPERNDLVSWNILMGGCVLVSDY 192
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG----------------- 167
++F K SG+ T LLSA G +G+ G
Sbjct: 193 SFVFDLFLKRGCSGIRASVATTLSLLSAAGDIGSFVLGKSLHGYCIKIGFCCNLNVVTAL 252
Query: 168 -----------LMSSTFG--ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDA 211
L F + DV + C++ R + EA++L+Q + +KP++
Sbjct: 253 IDMYAKTGCIYLARKVFDGVVEKDVVLWNCLIKNYARSCLVEEAVALLQSMRQEGVKPNS 312
Query: 212 VVWGALLGACKTFGNLEMGKQILKQLLELGR--YDSGLYVLLSNMYSESQRWDDMKKIRK 269
LL G+++ G + + L+E + D L L ++Y++ D+ +I +
Sbjct: 313 STLVGLLSVYSASGSMQ-GVRYVTSLIEEEKLELDVILGTALVDVYAKCGFLDEAMEIFE 371
Query: 270 IMNDSGIKKCRAISS 284
M + +K A+ S
Sbjct: 372 RMENKDVKSWTAVIS 386
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ SW ++IS H GQ A+ LF RM G P+ T ++IL++CSH G + G
Sbjct: 373 MENKDVKSWTAVISGHGIHGQAINAISLFNRMENEGFRPNEITFLAILTACSHGGLVTEG 432
Query: 62 KKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALA 119
+ + ++ + V L+++ + G L A ++ +P K + SW ++ A
Sbjct: 433 VEFFKRMVQEHGFSPWVEHYGCLIDLLGRAGMLHEAFELIKSLPIKGDATSWRTLLSACR 492
Query: 120 LHGSGK 125
+HG K
Sbjct: 493 VHGDVK 498
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 18/179 (10%)
Query: 49 LSSCSHMGDLALGKKAHDYICDNNIT-VSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN 107
L SC + ++ + H Y+ ++T V TL L A + A IF + N
Sbjct: 20 LKSCKTITEI---HQFHCYMIKTSLTNVPFTLSKLLA---ASIFDMNYASTIFTCIQNPN 73
Query: 108 VVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG 167
+ +N ++ ++ S +A+ +F K+R SG D +F ++ AC S V GR G
Sbjct: 74 LFMYNTMLRGYSVSNSSNKALPIFNKLRNSGNGLDPFSFIAVMKACGRSFEVGFGRGVHG 133
Query: 168 LMSST-----FGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
++ + ++ + + C+ G + +A + + P + D V W L+G C
Sbjct: 134 IVVKSGNRFFVDLNNTILQFYCVC------GRIDDARKVFDECPERNDLVSWNILMGGC 186
>Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:2188077-2185482 | 20130731
Length = 316
Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 135/227 (59%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
NS+I ++ E + LF M +S D TL +L SC+ + L LGK+ H +
Sbjct: 78 NSLIRAYLSLNLFKETLSLFREMRLSYKPFDCHTLPLVLKSCAGLSALRLGKQVHGAVLV 137
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEM 130
N + + N+L+NMYAKCG L+ A +F GM ++N V+W+ +I +HG +E EM
Sbjct: 138 NGFALDLKNSNALINMYAKCGELEFARKVFDGMCERNEVTWSTMIAGYGMHGRFEEVFEM 197
Query: 131 FEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLG 190
F +M G D ++FT +L+ACSH G VE GR F +M FG+ PDV HY CMVD+LG
Sbjct: 198 FNRMVEVGERMDNVSFTVVLTACSHGGFVEKGREIFEMMKVRFGVKPDVRHYTCMVDMLG 257
Query: 191 RGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
R G + EA L K+ ++PD + GAL GACKT G +++ +++ ++
Sbjct: 258 RVGLVEEAEKLTLKMDVRPDEALVGALFGACKTHGRVDVAERVAERF 304
>Medtr8g479320.2 | PPR containing plant-like protein | HC |
chr8:33809079-33805443 | 20130731
Length = 498
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 162/275 (58%), Gaps = 1/275 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V +N++IS + Q +A++LF M + P + TL SILS+CS + L G++
Sbjct: 212 KDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQGRQV 271
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + +V + ++L++MY+K G + A + +KN V W +I A G G
Sbjct: 272 HSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRG 331
Query: 125 KEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
EA+E+F+ + L PD + FT +L+AC+H+G ++ G YF M + +G+SPD+ YA
Sbjct: 332 LEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGLSPDIDIYA 391
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
C++DL R G L +A L++++P P+ ++W + L ACK +G++E+G++ QL+++
Sbjct: 392 CLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIYGDVELGREAAIQLIKMEPC 451
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
++ Y+ L+++Y+ W++ ++R +M +K
Sbjct: 452 NAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVKRK 486
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 138/312 (44%), Gaps = 46/312 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSC-SHMGDLAL 60
M + VSW S+I+ Q +A+ LF M + + P+ TL S++++C G L
Sbjct: 107 MKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEH 166
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
H ++ S + +SL++ YA G + A+ +F +K+ V +N +I
Sbjct: 167 CPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQ 226
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+ ++A+++F +MR + P + T + +LSACS ++ GR L+ G +V
Sbjct: 227 NLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVIK-MGSERNVY 285
Query: 181 HYACMVDLLGRGGFLGEAMS-----------------------------------LIQKL 205
+ ++D+ +GG + EA L+ K
Sbjct: 286 VASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKK 345
Query: 206 PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY----DSGLYVLLSNMYSESQRW 261
+ PD V + A+L AC G ++ G++ +++ Y D +Y L ++Y+ R
Sbjct: 346 ELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMIT--NYGLSPDIDIYACLIDLYA---RN 400
Query: 262 DDMKKIRKIMND 273
+++K R +M +
Sbjct: 401 GNLRKARDLMEE 412
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 129/291 (44%), Gaps = 37/291 (12%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
N I H + +A+E RM P L + LSSC+ + LG + H Y+
Sbjct: 15 NVYIRKHSKSASTCQALESLSRMNGLIEKPTKYVLCNALSSCAKTLNWHLGIQIHAYMIR 74
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEM 130
+ ++ LC++L++ YAKC A+ A IF M Q + VSW +I + + G++A+ +
Sbjct: 75 SGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLL 134
Query: 131 FEKMRASGLFPDEITFTGLLSAC-------SHSGLVEMGRYYFGLMSSTFGIS------- 176
F++M + + P+ T T +++AC H + + G +S+F IS
Sbjct: 135 FKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYA 194
Query: 177 -----------------PDVAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGA 216
D Y M+ + + +A+ L +++ M P +
Sbjct: 195 NWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSS 254
Query: 217 LLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMK 265
+L AC + L G+Q+ ++++G + +YV L +MYS+ D+ +
Sbjct: 255 ILSACSSLAMLLQGRQVHSLVIKMGS-ERNVYVASTLIDMYSKGGDIDEAQ 304
>Medtr8g479320.1 | PPR containing plant-like protein | HC |
chr8:33809124-33805421 | 20130731
Length = 498
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 162/275 (58%), Gaps = 1/275 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V +N++IS + Q +A++LF M + P + TL SILS+CS + L G++
Sbjct: 212 KDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQGRQV 271
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + +V + ++L++MY+K G + A + +KN V W +I A G G
Sbjct: 272 HSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRG 331
Query: 125 KEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
EA+E+F+ + L PD + FT +L+AC+H+G ++ G YF M + +G+SPD+ YA
Sbjct: 332 LEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGLSPDIDIYA 391
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
C++DL R G L +A L++++P P+ ++W + L ACK +G++E+G++ QL+++
Sbjct: 392 CLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIYGDVELGREAAIQLIKMEPC 451
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
++ Y+ L+++Y+ W++ ++R +M +K
Sbjct: 452 NAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVKRK 486
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 138/312 (44%), Gaps = 46/312 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSC-SHMGDLAL 60
M + VSW S+I+ Q +A+ LF M + + P+ TL S++++C G L
Sbjct: 107 MKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEH 166
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
H ++ S + +SL++ YA G + A+ +F +K+ V +N +I
Sbjct: 167 CPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQ 226
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+ ++A+++F +MR + P + T + +LSACS ++ GR L+ G +V
Sbjct: 227 NLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVIK-MGSERNVY 285
Query: 181 HYACMVDLLGRGGFLGEAMS-----------------------------------LIQKL 205
+ ++D+ +GG + EA L+ K
Sbjct: 286 VASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKK 345
Query: 206 PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY----DSGLYVLLSNMYSESQRW 261
+ PD V + A+L AC G ++ G++ +++ Y D +Y L ++Y+ R
Sbjct: 346 ELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMIT--NYGLSPDIDIYACLIDLYA---RN 400
Query: 262 DDMKKIRKIMND 273
+++K R +M +
Sbjct: 401 GNLRKARDLMEE 412
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 129/291 (44%), Gaps = 37/291 (12%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
N I H + +A+E RM P L + LSSC+ + LG + H Y+
Sbjct: 15 NVYIRKHSKSASTCQALESLSRMNGLIEKPTKYVLCNALSSCAKTLNWHLGIQIHAYMIR 74
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEM 130
+ ++ LC++L++ YAKC A+ A IF M Q + VSW +I + + G++A+ +
Sbjct: 75 SGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLL 134
Query: 131 FEKMRASGLFPDEITFTGLLSAC-------SHSGLVEMGRYYFGLMSSTFGIS------- 176
F++M + + P+ T T +++AC H + + G +S+F IS
Sbjct: 135 FKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYA 194
Query: 177 -----------------PDVAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGA 216
D Y M+ + + +A+ L +++ M P +
Sbjct: 195 NWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSS 254
Query: 217 LLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMK 265
+L AC + L G+Q+ ++++G + +YV L +MYS+ D+ +
Sbjct: 255 ILSACSSLAMLLQGRQVHSLVIKMGS-ERNVYVASTLIDMYSKGGDIDEAQ 304
>Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:36615461-36616774 | 20130731
Length = 316
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 136/228 (59%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
+NS+I ++ E + +F M +S D TL +L SC+ + L LGK+ H +
Sbjct: 77 YNSLIRAYLSLNLFKETLSIFREMRLSYKPFDCHTLPLVLKSCAGLSALRLGKQVHGAVL 136
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
N + + N+L+NMYAKCG L+ A +F GM ++N V+W+ ++ +HG +E E
Sbjct: 137 VNGFALDLKNSNALINMYAKCGELEFARKVFDGMCERNEVTWSTMMAGYGMHGRFEEVFE 196
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLL 189
MF +M G D ++FT +L+ACSH G VE GR F +M FG+ PDV HY CMVD+L
Sbjct: 197 MFNRMVEVGERMDNVSFTVVLTACSHGGFVEKGREIFEMMKVRFGVKPDVRHYTCMVDML 256
Query: 190 GRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
GR G + EA L K+ ++PD + GAL GACKT G +++ +++ ++
Sbjct: 257 GRVGLVEEAEKLTLKMDVRPDEALVGALFGACKTHGRVDVAERVAERF 304
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 166/298 (55%), Gaps = 3/298 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K++++W +I +VQ AEA+ LF M G P N+T + + + L LG +
Sbjct: 426 KDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGWQL 485
Query: 65 HDYICDN--NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H V L NSL++MYAKCG ++ A IF M ++ +SWN +I L+ HG
Sbjct: 486 HAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGLSDHG 545
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
EA+ M+E M G++PD +TF G+L+AC+H+G V+ G F +M + + + P + HY
Sbjct: 546 RANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGLEHY 605
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACK-TFGNLEMGKQILKQLLELG 241
++++LGR G + +A + +LP++P+ +WGAL+G C + + ++ ++ +LLEL
Sbjct: 606 VSIINILGRAGRVKDAEEFVLRLPVEPNHTIWGALIGVCGLSKTDADIARRAATRLLELD 665
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
++ +V L N+Y+ + R + +R+ M G++K S I + G + F D+
Sbjct: 666 PLNAPGHVTLCNIYAANDRHLEETSLRREMRMKGVRKAPGCSWILVKGKVHAFSSGDR 723
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 25/264 (9%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP +N V++N+++S ++Q G +A F M V+ + ++LS + +G +
Sbjct: 97 IMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDMPERNVV----SWTAMLSGYAGLGWIDD 152
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+K D + + N V NS++ + G L+ A +F P KNVVSWN +I
Sbjct: 153 ARKVFDEMPERN----VVSWNSMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMIEGYVE 208
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G +A ++F+++ + IT+T ++S G V F +M +V
Sbjct: 209 NGRMDDAKDLFDQIECRNV----ITWTSMISGYCRVGDVNEAFRLFQIMPEK-----NVV 259
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKL----PMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
+ M+ GF EA+ L + KP+ + +L+ AC G +GKQ+ Q
Sbjct: 260 SWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQ 319
Query: 237 LL----ELGRYDSGLYVLLSNMYS 256
++ +L YD L L MYS
Sbjct: 320 MILNRWKLDDYDCRLGRSLVRMYS 343
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 124/320 (38%), Gaps = 71/320 (22%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDNATLVSILSSCSHMGDLA 59
+MP KN VSW ++I G + EA+ LF M +S P+ T VS++ +C+ MG
Sbjct: 252 IMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACAGMGFPC 311
Query: 60 LGKKAH-----------DYICD--NNITVSVTLC----------------------NSLM 84
LGK+ H DY C ++ ++C NS++
Sbjct: 312 LGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQSFNSMI 371
Query: 85 NMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG---------------------------- 116
N Y + G L A ++F +P +N ++W +I
Sbjct: 372 NGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPDSDKDSIAW 431
Query: 117 ALALHGSGK-----EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL-MS 170
L ++G + EAI +F +M A G P T+ L A +++G + +
Sbjct: 432 TLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGWQLHAMQLK 491
Query: 171 STFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMG 230
+ + DV ++ + + G + +A + + + D + W +++ G
Sbjct: 492 TIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCR-DKISWNSMIMGLSDHGRANEA 550
Query: 231 KQILKQLLELGRYDSGLYVL 250
+ + +LE G Y + L
Sbjct: 551 LNMYETMLEFGVYPDAVTFL 570
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 10/166 (6%)
Query: 72 NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMF 131
NI V S++ YAK G ++ A ++F MP +N+V++N ++ A G ++A F
Sbjct: 67 NIHSRVVHWTSMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFF 126
Query: 132 EKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGR 191
+ M + +++T +LS + G ++ R F M +V + MV L R
Sbjct: 127 DDMPERNV----VSWTAMLSGYAGLGWIDDARKVFDEMPER-----NVVSWNSMVVGLIR 177
Query: 192 GGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
G L EA + P K + V W A++ G ++ K + Q+
Sbjct: 178 NGDLEEARKVFDDTPDK-NVVSWNAMIEGYVENGRMDDAKDLFDQI 222
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ +SWNS+I G+ EA+ ++ M GV PD T + +L++C+H G + G
Sbjct: 526 MNCRDKISWNSMIMGLSDHGRANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKG 585
Query: 62 KK-----AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVII 115
+ +DY + V S++N+ + G ++ A + +P + N W +I
Sbjct: 586 CELFSVMLNDYALQPGLEHYV----SIINILGRAGRVKDAEEFVLRLPVEPNHTIWGALI 641
Query: 116 GALAL 120
G L
Sbjct: 642 GVCGL 646