Miyakogusa Predicted Gene

Lj2g3v1828480.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1828480.2 Non Characterized Hit- tr|I3SG84|I3SG84_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.22,0,Ribosomal_S8e,Ribosomal protein S8e/ribosomal biogenesis
NSA2; SUBFAMILY NOT NAMED,NULL; FAMILY NOT ,CUFF.37867.2
         (129 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g088865.1 | ribosomal protein S8e family protein | HC | ch...   264   1e-71
Medtr0508s0010.2 | ribosomal protein S8e family protein | HC | s...   263   3e-71
Medtr0508s0010.1 | ribosomal protein S8e family protein | HC | s...   263   3e-71

>Medtr3g088865.1 | ribosomal protein S8e family protein | HC |
           chr3:40673322-40670252 | 20130731
          Length = 260

 Score =  264 bits (675), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 125/129 (96%), Positives = 128/129 (99%)

Query: 1   MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT 60
           MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT
Sbjct: 132 MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT 191

Query: 61  FNLEIIGVKKNPNGPMYTSLGVMTKGTIIEVNCSELGLVTPAGKVVWGKYAQVTNNPEND 120
           FNLEIIGVKKNPNGPMYTSLGV+T+G+IIEVN SELGLVTPAGKVVWGKYAQVTNNPEND
Sbjct: 192 FNLEIIGVKKNPNGPMYTSLGVITRGSIIEVNVSELGLVTPAGKVVWGKYAQVTNNPEND 251

Query: 121 GCINAVLLV 129
           GCINAVLLV
Sbjct: 252 GCINAVLLV 260


>Medtr0508s0010.2 | ribosomal protein S8e family protein | HC |
           scaffold0508:6814-10630 | 20130731
          Length = 260

 Score =  263 bits (673), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 125/129 (96%), Positives = 128/129 (99%)

Query: 1   MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT 60
           MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT
Sbjct: 132 MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT 191

Query: 61  FNLEIIGVKKNPNGPMYTSLGVMTKGTIIEVNCSELGLVTPAGKVVWGKYAQVTNNPEND 120
           FNLEIIGVKKNPNGPMYTSLGV+T+G+IIEVN SELGLVTPAGKVVWGKYAQVTNNPEND
Sbjct: 192 FNLEIIGVKKNPNGPMYTSLGVITRGSIIEVNVSELGLVTPAGKVVWGKYAQVTNNPEND 251

Query: 121 GCINAVLLV 129
           GCINAVLLV
Sbjct: 252 GCINAVLLV 260


>Medtr0508s0010.1 | ribosomal protein S8e family protein | HC |
           scaffold0508:6814-10630 | 20130731
          Length = 260

 Score =  263 bits (673), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 125/129 (96%), Positives = 128/129 (99%)

Query: 1   MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT 60
           MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT
Sbjct: 132 MFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCT 191

Query: 61  FNLEIIGVKKNPNGPMYTSLGVMTKGTIIEVNCSELGLVTPAGKVVWGKYAQVTNNPEND 120
           FNLEIIGVKKNPNGPMYTSLGV+T+G+IIEVN SELGLVTPAGKVVWGKYAQVTNNPEND
Sbjct: 192 FNLEIIGVKKNPNGPMYTSLGVITRGSIIEVNVSELGLVTPAGKVVWGKYAQVTNNPEND 251

Query: 121 GCINAVLLV 129
           GCINAVLLV
Sbjct: 252 GCINAVLLV 260