Miyakogusa Predicted Gene

Lj2g3v1804130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1804130.1 Non Characterized Hit- tr|I1MNI2|I1MNI2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2365 PE=,68.95,0,no
description,Terpenoid synthase; GERANYL GERANYL PYROPHOSPHATE
SYNTHASE,NULL; GERANYLGERANYL PYROP,CUFF.37847.1
         (375 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g078070.1 | geranylgeranyl pyrophosphate synthase | HC | c...   490   e-138
Medtr5g019460.1 | geranylgeranyl pyrophosphate synthase | HC | c...   477   e-135
Medtr2g072470.1 | solanesyl diphosphate synthase | HC | chr2:305...   133   3e-31
Medtr4g095055.1 | geranylgeranyl pyrophosphate synthase | HC | c...    89   6e-18
Medtr5g092910.1 | geranylgeranyl pyrophosphate synthase | HC | c...    87   4e-17
Medtr4g095055.2 | geranylgeranyl pyrophosphate synthase | HC | c...    57   3e-08

>Medtr8g078070.1 | geranylgeranyl pyrophosphate synthase | HC |
           chr8:33275574-33277440 | 20130731
          Length = 372

 Score =  490 bits (1261), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 235/303 (77%), Positives = 271/303 (89%), Gaps = 2/303 (0%)

Query: 75  VEELKSTPKFNFEAYMLQKAHTINKALDAAIPLKEPEKIHQAMRYSLLAGGKRVRPVLCI 134
           +E  +  P FNF++YM++KA  +NKALD A+ L+EP K+H+AMRYSLLAGGKRVRPVLC+
Sbjct: 70  IEAEEQNPIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCL 129

Query: 135 AACELVGGDEQTAMPAACAVEIIHTMSLIHDDLPCMDNDDLRRGRPTNHKAFGENFAVLA 194
           AACELVGG E  AMPAACAVE+IHTMSLIHDDLPCMDNDDLRRG+PTNHK FGE+ AVLA
Sbjct: 130 AACELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLA 189

Query: 195 GDALLAFAFEHLTCSKV--APGRVVRAVAELAKSVGGEGLVAGQTVDIDSEGVSDVGLER 252
           GDALLAFAFEH+  S V  +P R+VRA+ ELAKS+G EGLVAGQ VDI+SEG+SDVGLER
Sbjct: 190 GDALLAFAFEHIAVSTVDVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLER 249

Query: 253 LEYIHVHKTAVLLEASVVLGAIMGGGSDEEVERLRKFARCIGLLFQVVDDILDVTKSSEE 312
           LE+IH+HKTA LLE +VVLGAI+GGGSDE+VE+LRKFA  IGLLFQVVDDILDVTKSS+E
Sbjct: 250 LEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDVTKSSQE 309

Query: 313 LGKTAGKDLVADKVTYPKLLGIEKSKEFAAKLNKEAHKQLAGFDPEKAAPLLALANYIAH 372
           LGKTAGKDLVADKVTYPKLLGIEKSKEFA KLN++A +QL+GFD  K+APL+ALANYIA+
Sbjct: 310 LGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNRDAQEQLSGFDLNKSAPLIALANYIAY 369

Query: 373 RQN 375
           RQN
Sbjct: 370 RQN 372


>Medtr5g019460.1 | geranylgeranyl pyrophosphate synthase | HC |
           chr5:7341789-7340535 | 20130731
          Length = 371

 Score =  477 bits (1228), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 250/381 (65%), Positives = 295/381 (77%), Gaps = 16/381 (4%)

Query: 1   MSSLNFGTWPSPTCLLNQGGRNPPTPNSIFHSLRRIPIPSITNELGRKXXXXXXXXXXXP 60
           MSS+N G    P  +LNQ           F +   IPI S TN+   +            
Sbjct: 1   MSSMNLG----PNSMLNQTITTKIQTIIPFLA---IPIFSSTNQ---QQTRNKLVSSFPS 50

Query: 61  LVISAVATNLDIL----TVEELKSTPKFNFEAYMLQKAHTINKALDAAIPLKEPEKIHQA 116
           L +SAV TN +I+    T EE      FNF  YML+KA+ +NKALD AI L+EPEKI++A
Sbjct: 51  LKLSAVLTNTNIVKDKKTEEETIPNFNFNFNGYMLEKANIVNKALDEAIVLQEPEKIYEA 110

Query: 117 MRYSLLAGGKRVRPVLCIAACELVGGDEQTAMPAACAVEIIHTMSLIHDDLPCMDNDDLR 176
           MRYSLLAGGKRVRPVLCIAAC LVGG E+ ++P+ACAVE+IHTMSLIHDDLPCMDNDDLR
Sbjct: 111 MRYSLLAGGKRVRPVLCIAACGLVGGKEEASIPSACAVEMIHTMSLIHDDLPCMDNDDLR 170

Query: 177 RGRPTNHKAFGENFAVLAGDALLAFAFEHLTCSKVA--PGRVVRAVAELAKSVGGEGLVA 234
           RG+PTNHK +GE+ AVLAGDALL+FAFEH+  S +   P R+VRA+AELAK+VG EGLVA
Sbjct: 171 RGKPTNHKVYGEDVAVLAGDALLSFAFEHVAVSTIGVPPERIVRAIAELAKAVGKEGLVA 230

Query: 235 GQTVDIDSEGVSDVGLERLEYIHVHKTAVLLEASVVLGAIMGGGSDEEVERLRKFARCIG 294
           GQ VD++SEG S+VGLE LE+IH+ KTA LLEA+VV+GAI+GGG+++E+E+LRKFAR IG
Sbjct: 231 GQIVDLESEGKSNVGLETLEFIHLRKTAALLEAAVVMGAIVGGGTEDEIEKLRKFARYIG 290

Query: 295 LLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLLGIEKSKEFAAKLNKEAHKQLAG 354
           LLFQVVDDILDVTKSSEELGKTAGKDL ADK TYPKLLG+EKSKEFA KL K+AH  L G
Sbjct: 291 LLFQVVDDILDVTKSSEELGKTAGKDLTADKATYPKLLGLEKSKEFADKLIKDAHDCLIG 350

Query: 355 FDPEKAAPLLALANYIAHRQN 375
           FD EKAAPL+AL NYIA+RQN
Sbjct: 351 FDVEKAAPLVALTNYIAYRQN 371


>Medtr2g072470.1 | solanesyl diphosphate synthase | HC |
           chr2:30511132-30506990 | 20130731
          Length = 421

 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/247 (37%), Positives = 133/247 (53%), Gaps = 16/247 (6%)

Query: 96  TINKALDAAIPLKEPEKIHQAMRYSLLAGGKRVRPVLCI----AACELVGGDEQTAMPAA 151
           T+NK L + +  + P  I  A +    AGGKR+RP L      A  EL G ++ T     
Sbjct: 112 TLNKNLQSIVGAENPVLISAAEQI-FSAGGKRMRPALVFLVSRATAELHGLEDLTVKHRR 170

Query: 152 CA--VEIIHTMSLIHDDLPCMDNDDLRRGRPTNHKAFGENFAVLAGDALLAFAFEHLTCS 209
            A  VE+IHT SLIHDD+  +D  DLRRG+ T H+ FG   AVLAGD + A +  +L  +
Sbjct: 171 LAEIVEMIHTASLIHDDV--LDESDLRRGKETVHQMFGTRVAVLAGDFMFAQSSWYL--A 226

Query: 210 KVAPGRVVRAVAELAKSVGGEGLVAGQTVDIDSEGVSDVGLERLEYIHVHKTAVLLEASV 269
            +    V++ ++++ K        +G+     S    DV L+        KTA L+ ASV
Sbjct: 227 NLENIEVIKLISQVIKD-----FASGEIKQASSLFDCDVQLDEYLIKSYFKTASLIAASV 281

Query: 270 VLGAIMGGGSDEEVERLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYP 329
              A+  G      E++ ++ + +GL FQVVDDILD T+S+E+LGK AG DL    +T P
Sbjct: 282 KGAAVFSGSDSSMTEKMFEYGKNLGLSFQVVDDILDFTQSAEQLGKPAGTDLAKGNLTAP 341

Query: 330 KLLGIEK 336
            +  +EK
Sbjct: 342 VIFALEK 348


>Medtr4g095055.1 | geranylgeranyl pyrophosphate synthase | HC |
           chr4:39596236-39604873 | 20130731
          Length = 417

 Score = 89.0 bits (219), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 119/251 (47%), Gaps = 29/251 (11%)

Query: 112 KIHQAMRYSLLAG--GKRVRP-VLCIAACEL------------VGGDEQTAMPA-----A 151
           K+  A  Y    G  GKR RP VL + +  L            +GG   T + +     A
Sbjct: 103 KLASAAEYFFKMGVEGKRFRPTVLLLMSTALNLPIPKAPPPMELGGTTTTDLRSRQQRIA 162

Query: 152 CAVEIIHTMSLIHDDLPCMDNDDLRRGRPTNHKAFGENFAVLAGDALLAFAFEHLTCSKV 211
              E+IH  SL+HDD+  +D+ D RRG  + +   G   AVLAGD LL+ A     C  +
Sbjct: 163 EITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRA-----CVAL 215

Query: 212 APGRVVRAVAELAKSVGGEGLVAGQTVDIDSEGVSDVGLERLEYIHVHKTAVLLEASVVL 271
           A  +    V+ LA+ V  E LV G+ + + +       +E       +KTA L+  S   
Sbjct: 216 ASLKNTEVVSLLAEVV--EHLVTGEIMQMTTTSDQRCSMEYYMEKTYYKTASLISNSCKA 273

Query: 272 GAIMGGGSDEEVERLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKL 331
            AI+ G + E      ++ + +GL FQ++DD+LD T +S  LGK +  D+    VT P L
Sbjct: 274 IAILAGQTAEVAVLAFEYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIQHGIVTAPIL 333

Query: 332 LGIEKSKEFAA 342
             +E+  +  A
Sbjct: 334 FAMEEFPQLRA 344


>Medtr5g092910.1 | geranylgeranyl pyrophosphate synthase | HC |
           chr5:40562778-40561412 | 20130731
          Length = 297

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 11/206 (5%)

Query: 97  INKALDAAIPLKEPEKIHQAMRYSLLAGGKRVRPVLCIAACELVGGDEQTAMPAACAVEI 156
           I   L   I +KEP  + + M + +    K   P LC+A CELVGG    A+ AA A+ +
Sbjct: 54  IEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLATCELVGGQRHQAISAASALLL 113

Query: 157 IHTMSLIHDDLPCMDNDDLRRGRPTNHKAFGENFAVLAGDALLAFAFEHLTCSKVAPG-- 214
           +   +  H+ LP  D     R RP  +  +G N  +L GD ++ F FE L  S       
Sbjct: 114 MEAATYTHEHLPLTD-----RPRPMINHVYGPNMELLTGDGIVPFGFELLARSDGGENSE 168

Query: 215 RVVRAVAELAKSVG-GEGLVAGQTVDI---DSEGVSDVGLERLEYIHVHKTAVLLEASVV 270
           R+++ + E++++VG G G++  Q   I    S+G     +E + ++       L     V
Sbjct: 169 RILKVMVEISRAVGSGGGVIDAQYGKILYSGSDGEEKCHVEEIRHVVEKYEGRLHSCGAV 228

Query: 271 LGAIMGGGSDEEVERLRKFARCIGLL 296
            G ++GGG +EE+ERLRKF   +G++
Sbjct: 229 CGGVLGGGCEEEIERLRKFGYYVGII 254


>Medtr4g095055.2 | geranylgeranyl pyrophosphate synthase | HC |
           chr4:39596236-39604873 | 20130731
          Length = 490

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 29/190 (15%)

Query: 112 KIHQAMRYSLLAG--GKRVRP-VLCIAACEL------------VGGDEQTAMPA-----A 151
           K+  A  Y    G  GKR RP VL + +  L            +GG   T + +     A
Sbjct: 103 KLASAAEYFFKMGVEGKRFRPTVLLLMSTALNLPIPKAPPPMELGGTTTTDLRSRQQRIA 162

Query: 152 CAVEIIHTMSLIHDDLPCMDNDDLRRGRPTNHKAFGENFAVLAGDALLAFAFEHLTCSKV 211
              E+IH  SL+HDD+  +D+ D RRG  + +   G   AVLAGD LL+ A     C  +
Sbjct: 163 EITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRA-----CVAL 215

Query: 212 APGRVVRAVAELAKSVGGEGLVAGQTVDIDSEGVSDVGLERLEYIHVHKTAVLLEASVVL 271
           A  +    V+ LA+ V  E LV G+ + + +       +E       +KTA L+  S   
Sbjct: 216 ASLKNTEVVSLLAEVV--EHLVTGEIMQMTTTSDQRCSMEYYMEKTYYKTASLISNSCKA 273

Query: 272 GAIMGGGSDE 281
            AI+ G + E
Sbjct: 274 IAILAGQTAE 283