Miyakogusa Predicted Gene

Lj2g3v1758470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1758470.1 Non Characterized Hit- tr|A9NW37|A9NW37_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,65.62,9e-19,seg,NULL; DUF1195,Protein of unknown function
DUF1195,CUFF.37987.1
         (173 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g019900.1 | polyol transporter-like protein, putative | HC...   300   3e-82
Medtr3g111800.1 | transmembrane protein, putative | HC | chr3:52...   137   5e-33
Medtr3g111800.2 | transmembrane protein, putative | HC | chr3:52...   137   7e-33

>Medtr5g019900.1 | polyol transporter-like protein, putative | HC |
           chr5:7548616-7552855 | 20130731
          Length = 171

 Score =  300 bits (769), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 147/173 (84%), Positives = 154/173 (89%), Gaps = 2/173 (1%)

Query: 1   MKDDDGLPTTTAPTAKKDNLDSGLFGKGRYKFWXXXXXXXXXFWSMFTGTVSLRWSGNLN 60
           MKDDDGLPTTTA   KK+N+DSGLFGKGRYKFW         FWSMFTGTVSLRWSGNLN
Sbjct: 1   MKDDDGLPTTTAAINKKENMDSGLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSGNLN 60

Query: 61  SLSNDLDTPIHDDLDVLEMEEREKVVRHMWDVYTNSRRIRLPRFWQEAFEAAYEELTSDA 120
           +LS+DLDTPIHDDLDVLEMEEREKVVRHMWDVYTNSRRIRLPRFWQEAFEAAYEELTSD 
Sbjct: 61  TLSSDLDTPIHDDLDVLEMEEREKVVRHMWDVYTNSRRIRLPRFWQEAFEAAYEELTSDV 120

Query: 121 PGVRDAAITEIAKMSVRSIDFDPPPIQSTRAQEFSKSLKQVEKGKGATTSRRA 173
           PGVRD AITEIAKMSVRS+++DPPPIQSTRAQEFSKSLKQ EKGK A   RRA
Sbjct: 121 PGVRDDAITEIAKMSVRSVNYDPPPIQSTRAQEFSKSLKQAEKGKEAM--RRA 171


>Medtr3g111800.1 | transmembrane protein, putative | HC |
           chr3:52297630-52299585 | 20130731
          Length = 166

 Score =  137 bits (345), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 79/111 (71%), Gaps = 3/111 (2%)

Query: 26  GKGRYKFWXXXXXXXXXFWSMFTGTVSLRWS-GNLNSLSNDLDTPIHDDLDVLEMEEREK 84
           GK  YK            W MFTG+++L+ S  NLN  S+DLD+ I DDLDVLE+EEREK
Sbjct: 7   GKRHYKLCALAAIVLIALWFMFTGSITLKLSINNLNPFSDDLDSMILDDLDVLEVEEREK 66

Query: 85  VVRHMWDVYT--NSRRIRLPRFWQEAFEAAYEELTSDAPGVRDAAITEIAK 133
           VVRHMWDVYT  +S  I LP+FW EAFEAAYE L SD P VRDAA++EIAK
Sbjct: 67  VVRHMWDVYTRSHSNSIGLPQFWLEAFEAAYEHLVSDVPAVRDAAVSEIAK 117


>Medtr3g111800.2 | transmembrane protein, putative | HC |
           chr3:52297630-52300313 | 20130731
          Length = 146

 Score =  137 bits (344), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 79/111 (71%), Gaps = 3/111 (2%)

Query: 26  GKGRYKFWXXXXXXXXXFWSMFTGTVSLRWS-GNLNSLSNDLDTPIHDDLDVLEMEEREK 84
           GK  YK            W MFTG+++L+ S  NLN  S+DLD+ I DDLDVLE+EEREK
Sbjct: 7   GKRHYKLCALAAIVLIALWFMFTGSITLKLSINNLNPFSDDLDSMILDDLDVLEVEEREK 66

Query: 85  VVRHMWDVYT--NSRRIRLPRFWQEAFEAAYEELTSDAPGVRDAAITEIAK 133
           VVRHMWDVYT  +S  I LP+FW EAFEAAYE L SD P VRDAA++EIAK
Sbjct: 67  VVRHMWDVYTRSHSNSIGLPQFWLEAFEAAYEHLVSDVPAVRDAAVSEIAK 117