Miyakogusa Predicted Gene

Lj2g3v1757330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1757330.1 tr|B9HEW6|B9HEW6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_764723 PE=4 SV=1,43.52,0.000001,
,CUFF.37801.1
         (110 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g020090.1 | hypothetical protein | HC | chr5:7660552-76599...   118   1e-27
Medtr5g020110.1 | hypothetical protein | HC | chr5:7663132-76625...   114   2e-26

>Medtr5g020090.1 | hypothetical protein | HC | chr5:7660552-7659973
           | 20130731
          Length = 102

 Score =  118 bits (295), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 10/111 (9%)

Query: 1   MECSRSSRLSRSQHILLLSESVSSDCTRMAGYERLSRSMSLDREYDFSDQDQHDKKQHKR 60
           ME  RS RLSRS+ ILL SES++S+C +++GYERLS+SM L  EY        + K++KR
Sbjct: 1   MEFGRSFRLSRSERILLSSESITSECAKISGYERLSQSMRLSEEY--------EHKKNKR 52

Query: 61  GLGILSKVILPFKKISNPPEES-PPKVAEKKEKKRSSWLPDPDKRWPIQGW 110
           G+G ++KV L F++IS P E +   ++A KKEKKRSSWLPDP+ RWPIQGW
Sbjct: 53  GIGFITKV-LSFRRISTPHEGNVAVELAAKKEKKRSSWLPDPNNRWPIQGW 102


>Medtr5g020110.1 | hypothetical protein | HC | chr5:7663132-7662512
           | 20130731
          Length = 96

 Score =  114 bits (285), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/110 (55%), Positives = 79/110 (71%), Gaps = 14/110 (12%)

Query: 1   MECSRSSRLSRSQHILLLSESVSSDCTRMAGYERLSRSMSLDREYDFSDQDQHDKKQHKR 60
           ME  +S RLSRS+ ILL SESV+S+C ++ GYERLS++M ++ EY+         K++KR
Sbjct: 1   MEFRKSVRLSRSEGILLSSESVTSECAKVGGYERLSQTMEINEEYEH--------KKNKR 52

Query: 61  GLGILSKVILPFKKISNPPEESPPKVAEKKEKKRSSWLPDPDKRWPIQGW 110
           G+G L+KV L   +IS+P E      AEKKEKKRSSWLPDP KRWP+QGW
Sbjct: 53  GIGFLNKV-LNLTRISSPHE-----AAEKKEKKRSSWLPDPQKRWPVQGW 96