Miyakogusa Predicted Gene

Lj2g3v1757060.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1757060.1 Non Characterized Hit- tr|D7SPC8|D7SPC8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,32.37,9e-19,seg,NULL; coiled-coil,NULL,CUFF.37974.1
         (237 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g020520.1 | late embryogenesis abundant domain protein/LEA...   175   3e-44

>Medtr5g020520.1 | late embryogenesis abundant domain protein/LEA
           domain protein, putative | HC | chr5:7845669-7841578 |
           20130731
          Length = 334

 Score =  175 bits (444), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/249 (46%), Positives = 145/249 (58%), Gaps = 43/249 (17%)

Query: 1   MKSAASGASDYASQKATDAREAVSEAVSYGREKASKAYD--DSDEVIRMPTDKNKINDAK 58
           MKSAASGAS+YASQKA D +EA+S A+SYGREK S++Y+    DE IRMPT+K       
Sbjct: 113 MKSAASGASEYASQKARDTKEAISGAISYGREKTSESYNRIGGDENIRMPTEK------- 165

Query: 59  DMVGDTYEDAKQKMYMASDKASTMARNAKDNM-------AEKASNVYEQGKEKINTASDM 111
             V +TYEDAKQK+ +ASDKAS MA+N KDNM        + A+NVY+QG +K+N  SDM
Sbjct: 166 --VTETYEDAKQKLNIASDKASNMAQNVKDNMDDGMGYGRKGAANVYDQGNQKLNMDSDM 223

Query: 112 ASEKFHDA-------NDCAQGRMKSAPPKIQSVKSKGKRIVDYGRDKAFAAYDETKERVN 164
           ASEKFHDA       +D A+ R+K A  K+      G  +V               ++ N
Sbjct: 224 ASEKFHDAKEKASNVHDEAKERIKVASHKMYDEARNGMNVVG--------------DKGN 269

Query: 165 DAKDKMGEAMGLDRDKIAETFEQAKDEVGERYMSAKNTMSXXXXXXXXXXXXXXXXXXXX 224
           DAKDK    MG   DK+ ETF+QAK EVGE YMSA+++ S                    
Sbjct: 270 DAKDK----MGCGGDKVEETFDQAKHEVGEAYMSARDSTSEEAKAKYQAAKEKASEATGN 325

Query: 225 FGEMLRNTP 233
            G  +RNTP
Sbjct: 326 LGAKMRNTP 334