Miyakogusa Predicted Gene

Lj2g3v1734700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1734700.1 Non Characterized Hit- tr|K3ZQ58|K3ZQ58_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si028738,33.1,1e-16,seg,NULL,CUFF.38675.1
         (1062 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g061300.1 | hypothetical protein | LC | chr5:25477205-2547...   168   2e-41
Medtr7g027580.1 | hypothetical protein | HC | chr7:9240366-92414...    72   2e-12

>Medtr5g061300.1 | hypothetical protein | LC | chr5:25477205-25475100
            | 20130731
          Length = 326

 Score =  168 bits (426), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 75/153 (49%), Positives = 103/153 (67%)

Query: 909  KGTSKRRTRGPTLCLNIHARNHNDRQEVVLDEYGEPIGPDGQTVSDLSHFLGTIARNANF 968
            +G S+R+TRG TLC  IHAR   +R EV  ++  +PIGP  + VSDLS FLGT+ARN+ F
Sbjct: 46   QGISQRKTRGRTLCKKIHARTFEERVEVTYNDVDQPIGPTKKVVSDLSLFLGTLARNSTF 105

Query: 969  CPLIYTNFKALVKDNEELIWGYVNDKFIIPDKGRKAVFSCINDAWRRHKCRIKRNYFLKY 1028
            CPL YTN+  + + N+  +W Y N KFI+  + R  V + + DAWRR+K +IK+++FLKY
Sbjct: 106  CPLKYTNWSGMPEKNKNRVWRYANRKFILSVEARDWVETTVRDAWRRYKYKIKQHHFLKY 165

Query: 1029 SSMKERLKHCPTTIPKAHFKQLMTYWRNSTIQV 1061
             +M ERLKH P  +P AHF+ L  +W    IQ 
Sbjct: 166  PNMTERLKHRPPKVPIAHFRALCEFWSKEPIQA 198


>Medtr7g027580.1 | hypothetical protein | HC | chr7:9240366-9241491
           | 20130731
          Length = 186

 Score = 72.4 bits (176), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 7/94 (7%)

Query: 902 QEEVVKTKGTSKRRTRGPTLCLNIHARNHNDRQEVVLDEYGEPIGPDGQTVSDLSHFLGT 961
           QEE  K +G++ ++TRGPT CL  H     +R  + L+ +G+PIG +    + LS +LGT
Sbjct: 79  QEEERKMRGSTSKKTRGPTTCLKTHGLRDEERLPIRLNMFGQPIGCN---RAALSTYLGT 135

Query: 962 IARNANFCPLIYTNFKAL----VKDNEELIWGYV 991
           +ARNA+  P+ YT +K L     +D E+ +WG V
Sbjct: 136 LARNAHLVPIKYTCWKQLQLNESEDWEDDMWGTV 169