Miyakogusa Predicted Gene

Lj2g3v1729140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1729140.1 tr|J3LFG1|J3LFG1_ORYBR Chaperone protein DnaJ
OS=Oryza brachyantha GN=OB02G33780 PE=3 SV=1,77.59,2e-19,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; HSP40/DnaJ peptide-binding
domain,HSP40/DnaJ peptid,CUFF.37758.1
         (61 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g087660.2 | DnaJ-class molecular chaperone | HC | chr2:368...   108   8e-25
Medtr2g087660.1 | DnaJ-class molecular chaperone | HC | chr2:368...   108   9e-25
Medtr4g050420.1 | DnaJ-class molecular chaperone | HC | chr4:178...   106   5e-24
Medtr8g006430.1 | DnaJ-class molecular chaperone | HC | chr8:521...    86   6e-18
Medtr5g037880.1 | potyviral capsid protein interacting protein |...    51   3e-07
Medtr2g090705.1 | DnaJ heat shock family protein | HC | chr2:388...    50   6e-07
Medtr4g078850.1 | DnaJ heat shock family protein | HC | chr4:304...    49   1e-06
Medtr2g014470.1 | DnaJ heat shock family protein | HC | chr2:414...    48   2e-06
Medtr3g108020.1 | DnaJ heat shock family protein | HC | chr3:499...    46   7e-06

>Medtr2g087660.2 | DnaJ-class molecular chaperone | HC |
           chr2:36877846-36880558 | 20130731
          Length = 327

 Score =  108 bits (271), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 51/58 (87%), Positives = 53/58 (91%)

Query: 1   MQNGQKITFPGEADEAPDPITGDIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAVLYF 58
           MQNGQKITFPGEADEAPD +TGDIVFVLQ KEHPKFKRK EDLFVEHTLSLTEA+  F
Sbjct: 230 MQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGF 287


>Medtr2g087660.1 | DnaJ-class molecular chaperone | HC |
           chr2:36877846-36880571 | 20130731
          Length = 417

 Score =  108 bits (271), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 51/58 (87%), Positives = 53/58 (91%)

Query: 1   MQNGQKITFPGEADEAPDPITGDIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAVLYF 58
           MQNGQKITFPGEADEAPD +TGDIVFVLQ KEHPKFKRK EDLFVEHTLSLTEA+  F
Sbjct: 230 MQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGF 287


>Medtr4g050420.1 | DnaJ-class molecular chaperone | HC |
           chr4:17858521-17854579 | 20130731
          Length = 416

 Score =  106 bits (264), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 50/58 (86%), Positives = 53/58 (91%)

Query: 1   MQNGQKITFPGEADEAPDPITGDIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAVLYF 58
           MQN QKITFPGEADEAPD +TGDIVFVLQ KEHPKFKRK+EDLFVEHTLSLTEA+  F
Sbjct: 228 MQNSQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKSEDLFVEHTLSLTEALCGF 285


>Medtr8g006430.1 | DnaJ-class molecular chaperone | HC |
           chr8:521449-515917 | 20130731
          Length = 423

 Score = 86.3 bits (212), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/58 (68%), Positives = 47/58 (81%)

Query: 1   MQNGQKITFPGEADEAPDPITGDIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAVLYF 58
           MQ G KI F G+ADEAPD ITGDIVFVLQ+K HPKF+R+ +DL +EH LSLTEA+  F
Sbjct: 232 MQQGHKIVFEGQADEAPDTITGDIVFVLQVKGHPKFRRERDDLHIEHNLSLTEALCGF 289


>Medtr5g037880.1 | potyviral capsid protein interacting protein | HC
           | chr5:16557677-16560379 | 20130731
          Length = 280

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 34/55 (61%)

Query: 2   QNGQKITFPGEADEAPDPITGDIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAVL 56
           + G KITFPG+  + P     D++FV+  + HP FKR  +DL +   +SL EA++
Sbjct: 149 KKGTKITFPGKGSQQPGSAPSDVIFVVNERPHPIFKRDGKDLIMTEKISLLEALV 203


>Medtr2g090705.1 | DnaJ heat shock family protein | HC |
           chr2:38858994-38862715 | 20130731
          Length = 336

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%)

Query: 1   MQNGQKITFPGEADEAPDPITGDIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAV 55
            + G KITFP + +E P+ I  DI+FV+  K H  F R+  DL V   +SL EA+
Sbjct: 208 WKKGTKITFPEKGNEHPNTIPADIIFVIDEKPHNVFTREGNDLIVTQKISLAEAL 262


>Medtr4g078850.1 | DnaJ heat shock family protein | HC |
           chr4:30479590-30482280 | 20130731
          Length = 347

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 34/60 (56%)

Query: 1   MQNGQKITFPGEADEAPDPITGDIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAVLYFLV 60
            + G KITFP + +E P+    D++FV+  + H  F R+  DL V   +SL EA+  + V
Sbjct: 217 WKKGTKITFPEKGNEQPNVTAADLIFVIDERPHSVFSREGNDLIVTQKISLAEALTGYTV 276


>Medtr2g014470.1 | DnaJ heat shock family protein | HC |
           chr2:4141807-4143789 | 20130731
          Length = 340

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 33/60 (55%)

Query: 1   MQNGQKITFPGEADEAPDPITGDIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAVLYFLV 60
            + G KITFP + +E P+ I  D++FV+  K H  F R   DL     +SL EA+  + V
Sbjct: 212 WKKGTKITFPEKGNEQPNVIPADLIFVIDEKPHGVFTRDGNDLVATQKISLAEALTGYTV 271


>Medtr3g108020.1 | DnaJ heat shock family protein | HC |
           chr3:49917585-49915782 | 20130731
          Length = 327

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%)

Query: 1   MQNGQKITFPGEADEAPDPITGDIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAV 55
            + G KITFP + ++  + +  D+VFV+  K H  FKR   DL V   +SL EA+
Sbjct: 199 WKKGTKITFPDKGNQLINQLPADLVFVIDEKPHELFKRDGNDLIVNQKISLAEAI 253