Miyakogusa Predicted Gene
- Lj2g3v1728800.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1728800.1 Non Characterized Hit- tr|I3T8P7|I3T8P7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.57,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,Protein of unknown function
DUF778; DUF778,Prote,CUFF.37731.1
(232 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g021170.1 | protein reversion-TO-ethylene SENSITIVITY prot... 353 5e-98
Medtr1g016390.1 | protein reversion-TO-ethylene SENSITIVITY prot... 194 8e-50
Medtr1g016390.3 | protein reversion-TO-ethylene SENSITIVITY prot... 193 1e-49
Medtr1g016390.2 | protein reversion-TO-ethylene SENSITIVITY prot... 193 1e-49
>Medtr5g021170.1 | protein reversion-TO-ethylene SENSITIVITY protein
| HC | chr5:8129601-8131655 | 20130731
Length = 234
Score = 353 bits (907), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 174/233 (74%), Positives = 186/233 (79%), Gaps = 4/233 (1%)
Query: 2 EPELDPEQVEMMEGGFSR--TMQIDPRRARFPCSVVWSPLPVISWFIPFIGHIGICREDG 59
E +LDPEQ MME GFSR TMQIDPRRARFPCS+VWSPLPVISWFIPFIGHIGICREDG
Sbjct: 4 ELDLDPEQQHMMENGFSRINTMQIDPRRARFPCSIVWSPLPVISWFIPFIGHIGICREDG 63
Query: 60 VILDFAGPNFVCVDNFAFGAATRYLQITKEKCCIPLGQSTCKDEALCTYMPDETGGELKT 119
VILDFAGPNFVCVDNFAFG+ATRYLQ+ K+KCCIPL QS K E YM DETGGEL+T
Sbjct: 64 VILDFAGPNFVCVDNFAFGSATRYLQLPKDKCCIPLSQSAYKGEE--HYMQDETGGELRT 121
Query: 120 WDDALRKSTQEFQHRSYNLFTCNCHSFVANNLNRMGFLSRGWNVVNLAIFILFNGRWVST 179
WDDAL KSTQEFQHRSY+LFTCNCHSFVANNLNR+G+LS GWNVVNLA+FIL NGRWVS
Sbjct: 122 WDDALLKSTQEFQHRSYSLFTCNCHSFVANNLNRLGYLSSGWNVVNLAVFILLNGRWVSK 181
Query: 180 ASMXXXXXXXXXXXXXXXXXXXXXXXKFWALFASVLIGWFLLGTYCFKGLIQL 232
SM KFW LF SVLIGWF+LGTYCFK +IQL
Sbjct: 182 ISMLRTILPFVIVFFLGVTLGGFTFLKFWFLFTSVLIGWFILGTYCFKDMIQL 234
>Medtr1g016390.1 | protein reversion-TO-ethylene SENSITIVITY protein
| HC | chr1:4347937-4351312 | 20130731
Length = 276
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 139/237 (58%), Gaps = 11/237 (4%)
Query: 1 MEPELDPEQV---EMMEGGFSRTMQIDPRRARFPCSVVWSPLPVISWFIPFIGHIGICRE 57
+ D EQ+ + ME IDP+ A+FPC +VW+PLPV+SW PFIGH+GICRE
Sbjct: 44 LNASYDIEQLRPKKKMEHDLWPLDPIDPKNAKFPCCLVWNPLPVVSWLAPFIGHVGICRE 103
Query: 58 DGVILDFAGPNFVCVDNFAFGAATRYLQITKEKCCIP--LGQSTCKDEALCTYMPDETGG 115
DG +LDF+G V VD+FAFG RYL++ + +CC P L TCK Y E G
Sbjct: 104 DGTVLDFSGSYCVNVDDFAFGPVARYLELDRRQCCFPPNLSGHTCKH----GYRHTEYGT 159
Query: 116 ELKTWDDALRKSTQEFQHRSYNLFTCNCHSFVANNLNRMGF-LSRGWNVVNLAIFILFNG 174
+ TWDDALR S + F+ ++YNLFTCNCHSFVAN+LNR+ + S WN+VN+ I ILF G
Sbjct: 160 AI-TWDDALRTSLRHFESKTYNLFTCNCHSFVANSLNRLCYGGSMSWNMVNVGILILFKG 218
Query: 175 RWVSTASMXXXXXXXXXXXXXXXXXXXXXXXKFWALFASVLIGWFLLGTYCFKGLIQ 231
WV S+ F+ +LIGWFLLGTY K L++
Sbjct: 219 HWVDFWSVVRSFLPFVVVVCVGIFMVGWPFLLGLLSFSLLLIGWFLLGTYLVKSLLE 275
>Medtr1g016390.3 | protein reversion-TO-ethylene SENSITIVITY protein
| HC | chr1:4347792-4351565 | 20130731
Length = 236
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 139/237 (58%), Gaps = 11/237 (4%)
Query: 1 MEPELDPEQV---EMMEGGFSRTMQIDPRRARFPCSVVWSPLPVISWFIPFIGHIGICRE 57
+ D EQ+ + ME IDP+ A+FPC +VW+PLPV+SW PFIGH+GICRE
Sbjct: 4 LNASYDIEQLRPKKKMEHDLWPLDPIDPKNAKFPCCLVWNPLPVVSWLAPFIGHVGICRE 63
Query: 58 DGVILDFAGPNFVCVDNFAFGAATRYLQITKEKCCIP--LGQSTCKDEALCTYMPDETGG 115
DG +LDF+G V VD+FAFG RYL++ + +CC P L TCK Y E G
Sbjct: 64 DGTVLDFSGSYCVNVDDFAFGPVARYLELDRRQCCFPPNLSGHTCKH----GYRHTEYGT 119
Query: 116 ELKTWDDALRKSTQEFQHRSYNLFTCNCHSFVANNLNRMGF-LSRGWNVVNLAIFILFNG 174
+ TWDDALR S + F+ ++YNLFTCNCHSFVAN+LNR+ + S WN+VN+ I ILF G
Sbjct: 120 AI-TWDDALRTSLRHFESKTYNLFTCNCHSFVANSLNRLCYGGSMSWNMVNVGILILFKG 178
Query: 175 RWVSTASMXXXXXXXXXXXXXXXXXXXXXXXKFWALFASVLIGWFLLGTYCFKGLIQ 231
WV S+ F+ +LIGWFLLGTY K L++
Sbjct: 179 HWVDFWSVVRSFLPFVVVVCVGIFMVGWPFLLGLLSFSLLLIGWFLLGTYLVKSLLE 235
>Medtr1g016390.2 | protein reversion-TO-ethylene SENSITIVITY protein
| HC | chr1:4347792-4351565 | 20130731
Length = 236
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 139/237 (58%), Gaps = 11/237 (4%)
Query: 1 MEPELDPEQV---EMMEGGFSRTMQIDPRRARFPCSVVWSPLPVISWFIPFIGHIGICRE 57
+ D EQ+ + ME IDP+ A+FPC +VW+PLPV+SW PFIGH+GICRE
Sbjct: 4 LNASYDIEQLRPKKKMEHDLWPLDPIDPKNAKFPCCLVWNPLPVVSWLAPFIGHVGICRE 63
Query: 58 DGVILDFAGPNFVCVDNFAFGAATRYLQITKEKCCIP--LGQSTCKDEALCTYMPDETGG 115
DG +LDF+G V VD+FAFG RYL++ + +CC P L TCK Y E G
Sbjct: 64 DGTVLDFSGSYCVNVDDFAFGPVARYLELDRRQCCFPPNLSGHTCKH----GYRHTEYGT 119
Query: 116 ELKTWDDALRKSTQEFQHRSYNLFTCNCHSFVANNLNRMGF-LSRGWNVVNLAIFILFNG 174
+ TWDDALR S + F+ ++YNLFTCNCHSFVAN+LNR+ + S WN+VN+ I ILF G
Sbjct: 120 AI-TWDDALRTSLRHFESKTYNLFTCNCHSFVANSLNRLCYGGSMSWNMVNVGILILFKG 178
Query: 175 RWVSTASMXXXXXXXXXXXXXXXXXXXXXXXKFWALFASVLIGWFLLGTYCFKGLIQ 231
WV S+ F+ +LIGWFLLGTY K L++
Sbjct: 179 HWVDFWSVVRSFLPFVVVVCVGIFMVGWPFLLGLLSFSLLLIGWFLLGTYLVKSLLE 235