Miyakogusa Predicted Gene
- Lj2g3v1728750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1728750.1 Non Characterized Hit- tr|I1J8P6|I1J8P6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1927
PE=,89.73,0,SUBFAMILY NOT NAMED,NULL; D-LACTATE DEHYDROGENASE,NULL;
FAD_PCMH,FAD-binding, type 2; FAD-binding do,CUFF.37725.1
(558 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g021240.1 | D-2-hydroxyglutarate dehydrogenase | HC | chr5... 940 0.0
Medtr5g021240.2 | D-2-hydroxyglutarate dehydrogenase | HC | chr5... 769 0.0
Medtr7g107050.1 | D-lactate dehydrogenase (cytochrome) | HC | ch... 150 4e-36
Medtr7g107050.2 | D-lactate dehydrogenase (cytochrome) | HC | ch... 111 2e-24
>Medtr5g021240.1 | D-2-hydroxyglutarate dehydrogenase | HC |
chr5:8176429-8185154 | 20130731
Length = 561
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/561 (82%), Positives = 504/561 (89%), Gaps = 3/561 (0%)
Query: 1 MMNRNTRATLRLLTPFFNPRRNPS-LLPSTPHFDENWWHSQTNIAHGEHRVSSLFNPLRF 59
M+NRN+R TLR LT F + + NPS S FDEN + N+ E++ + FNPL
Sbjct: 1 MINRNSRNTLRFLTRFHHHQHNPSSQFTSKTVFDENCKQLKRNVLPTENKAFNFFNPLTN 60
Query: 60 SVKNQQMGVGISTGIQHKCY-ASMPGLVQRNPRFSELNDDDVRYFQEILGQKNVVQDEEK 118
KN+Q+G GIS GI KCY SM G VQR+ RFSELNDDDVRYF+EILG+KNVVQDE+K
Sbjct: 61 FFKNKQLGHGISCGILQKCYYGSMGGAVQRSSRFSELNDDDVRYFEEILGKKNVVQDEDK 120
Query: 119 LSTVNTDWMHKYEGSSKLLLQPWNTDQVSQILKYCNSRSLAVVPQGGNTGLVGGSVPVFD 178
LS N DWMHKY+GSSKL+LQP NTDQVSQILKYCNSR LAVVPQGGNTGLVGGSVPVFD
Sbjct: 121 LSVANIDWMHKYKGSSKLILQPCNTDQVSQILKYCNSRCLAVVPQGGNTGLVGGSVPVFD 180
Query: 179 EVIVSLSSMNKVISFDKVSGILVCEAGCILENIISFLDNEGFIMPLDLGAKGSCQIGGNV 238
EVIVSLSSMN +ISFDKVSGILVCEAGCILENI+SFLDNEGFIMPLDLGAKGSCQIGGNV
Sbjct: 181 EVIVSLSSMNNIISFDKVSGILVCEAGCILENIMSFLDNEGFIMPLDLGAKGSCQIGGNV 240
Query: 239 STNAGGLRLVRYGSLHGSVLGVEAVLADGTVLDMLKTLRKDNTGYDLKHLFIGSEGSLGI 298
STNAGGLRLVRYGSLHG+VLGVEAVLA+GTVLDMLKTLRKDNTGYDLKHLFIGSEGSLGI
Sbjct: 241 STNAGGLRLVRYGSLHGNVLGVEAVLANGTVLDMLKTLRKDNTGYDLKHLFIGSEGSLGI 300
Query: 299 VTKVAILTPPKLSSVNVALLACKDYNCCQKLLQEAKRKLGEILSAFEFLDSQSMNLVINH 358
VTKV+ILTPPKLSSVNVALLACKDY+CCQKLLQEAKRKLGEILSAFEFLD QSM+LV NH
Sbjct: 301 VTKVSILTPPKLSSVNVALLACKDYSCCQKLLQEAKRKLGEILSAFEFLDGQSMDLVTNH 360
Query: 359 LEGARNPLPTL-HDFYVLIETTGSDESSDKQKLEAFLLHSMENELISDGVLAQDINQASS 417
LEGARNP T H+FYVLIETTGSDESSDKQKLEAFLL SMENELI+DGVLAQDINQAS+
Sbjct: 361 LEGARNPFSTSHHNFYVLIETTGSDESSDKQKLEAFLLGSMENELIADGVLAQDINQAST 420
Query: 418 FWRLREGITEALMRVGAVYKYDLSIPLENLYNLVEEMRSRLGNAANVVGYGHLGDGNLHL 477
FWR+REGI+EALM+ GAVYKYD+SIP+ENLYNLVEEMRSRLG+AANV+GYGHLGDGNLHL
Sbjct: 421 FWRIREGISEALMKAGAVYKYDVSIPVENLYNLVEEMRSRLGDAANVIGYGHLGDGNLHL 480
Query: 478 NISVPQYDDKILSQIEPFVYEWTSKHNGSISAEHGLGLMKANEILYSKSLETVQLMASIK 537
N+SV QYD+KILSQIEPFVYEWTSK GSISAEHG+GLMKANEI YS+S ETVQ+MASIK
Sbjct: 481 NVSVSQYDEKILSQIEPFVYEWTSKKRGSISAEHGVGLMKANEIFYSQSHETVQMMASIK 540
Query: 538 NLLDPNHILNPYKVLPHSLIA 558
NL+DPNHILNPYKVLPHS+ +
Sbjct: 541 NLMDPNHILNPYKVLPHSITS 561
>Medtr5g021240.2 | D-2-hydroxyglutarate dehydrogenase | HC |
chr5:8176429-8185066 | 20130731
Length = 459
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/416 (89%), Positives = 399/416 (95%), Gaps = 1/416 (0%)
Query: 144 DQVSQILKYCNSRSLAVVPQGGNTGLVGGSVPVFDEVIVSLSSMNKVISFDKVSGILVCE 203
+ VSQILKYCNSR LAVVPQGGNTGLVGGSVPVFDEVIVSLSSMN +ISFDKVSGILVCE
Sbjct: 44 NHVSQILKYCNSRCLAVVPQGGNTGLVGGSVPVFDEVIVSLSSMNNIISFDKVSGILVCE 103
Query: 204 AGCILENIISFLDNEGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGSVLGVEAV 263
AGCILENI+SFLDNEGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHG+VLGVEAV
Sbjct: 104 AGCILENIMSFLDNEGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGVEAV 163
Query: 264 LADGTVLDMLKTLRKDNTGYDLKHLFIGSEGSLGIVTKVAILTPPKLSSVNVALLACKDY 323
LA+GTVLDMLKTLRKDNTGYDLKHLFIGSEGSLGIVTKV+ILTPPKLSSVNVALLACKDY
Sbjct: 164 LANGTVLDMLKTLRKDNTGYDLKHLFIGSEGSLGIVTKVSILTPPKLSSVNVALLACKDY 223
Query: 324 NCCQKLLQEAKRKLGEILSAFEFLDSQSMNLVINHLEGARNPLPTL-HDFYVLIETTGSD 382
+CCQKLLQEAKRKLGEILSAFEFLD QSM+LV NHLEGARNP T H+FYVLIETTGSD
Sbjct: 224 SCCQKLLQEAKRKLGEILSAFEFLDGQSMDLVTNHLEGARNPFSTSHHNFYVLIETTGSD 283
Query: 383 ESSDKQKLEAFLLHSMENELISDGVLAQDINQASSFWRLREGITEALMRVGAVYKYDLSI 442
ESSDKQKLEAFLL SMENELI+DGVLAQDINQAS+FWR+REGI+EALM+ GAVYKYD+SI
Sbjct: 284 ESSDKQKLEAFLLGSMENELIADGVLAQDINQASTFWRIREGISEALMKAGAVYKYDVSI 343
Query: 443 PLENLYNLVEEMRSRLGNAANVVGYGHLGDGNLHLNISVPQYDDKILSQIEPFVYEWTSK 502
P+ENLYNLVEEMRSRLG+AANV+GYGHLGDGNLHLN+SV QYD+KILSQIEPFVYEWTSK
Sbjct: 344 PVENLYNLVEEMRSRLGDAANVIGYGHLGDGNLHLNVSVSQYDEKILSQIEPFVYEWTSK 403
Query: 503 HNGSISAEHGLGLMKANEILYSKSLETVQLMASIKNLLDPNHILNPYKVLPHSLIA 558
GSISAEHG+GLMKANEI YS+S ETVQ+MASIKNL+DPNHILNPYKVLPHS+ +
Sbjct: 404 KRGSISAEHGVGLMKANEIFYSQSHETVQMMASIKNLMDPNHILNPYKVLPHSITS 459
>Medtr7g107050.1 | D-lactate dehydrogenase (cytochrome) | HC |
chr7:43648974-43639638 | 20130731
Length = 578
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 213/453 (47%), Gaps = 31/453 (6%)
Query: 115 DEEKLSTVNTDWMHKYEGSSKLLLQPWNTDQVSQILKYCNSRSLAVVPQGGNTGLVGGSV 174
DE + + HK +++ P + ++VS+I+K CN+ + +VP GG T + G ++
Sbjct: 138 DERYIHGKPQNSFHKAVNIPDVIVYPRSEEEVSKIVKSCNNHKIPIVPYGGATSIEGHTL 197
Query: 175 PVFDEVIVSLSSMNKVISFDKVSGILVCEAGCILENIISFLDNEGFIMPLDLGAKGSCQI 234
V + +SSM +V + +V + G + +L+ G PLD G S I
Sbjct: 198 SPNGGVCIDMSSMKRVKALHVDDMDVVVDPGIGWMELNEYLEPYGLFFPLDPGPGAS--I 255
Query: 235 GGNVSTNAGGLRLVRYGSLHGSVLGVEAVLADGTVLDMLKTLRKDNTGYDLKHLFIGSEG 294
GG +T G VRYG++ +V+ ++ V A+G ++ RK GYDL L IGSEG
Sbjct: 256 GGMCATRCSGSLAVRYGTMRDNVISLKVVFANGDIVKTASRARKSAAGYDLTRLVIGSEG 315
Query: 295 SLGIVTKVAILTPPKLSSV-NVALLACKDYNCCQKLLQEAKRKL--GEILSAFEFLDSQS 351
+LG++T+V + +L + +++A ++ + A + G +S E LD
Sbjct: 316 TLGVITEVTL----RLQKIPQFSVVAMCNFPSVKDAADVAITTMNSGIQVSRVELLDEVQ 371
Query: 352 MNLVINHLEGARNP-LPTLHDFYVLIETTGSDESSDKQKLEAFLLHSMENELISDGVLAQ 410
+ IN G P PTL + E G++ + +Q + S N SD V A+
Sbjct: 372 VK-AINIANGKNLPESPTL-----MFEFIGTEAYAREQTQIVRKIVSEHNG--SDFVFAE 423
Query: 411 DINQASSFWRLREGITEALMRVGAVYK------YDLSIPLENLYNLVEEMRSRLGNAANV 464
+ W++R+ EAL A+ D+ +PL +L +++ + + L + V
Sbjct: 424 EPEAKKELWKVRK---EALWACFAMEPNMEAMISDVCVPLSHLADIISKSKKELDASPLV 480
Query: 465 VGY-GHLGDGNLHLNI---SVPQYDDKILSQIEPFVYEWTSKHNGSISAEHGLGLMKANE 520
H GDGN H I + + ++ F+ G+ + EHG+G K
Sbjct: 481 CTVIAHAGDGNFHTVILFDPAKEEQRREAERLNHFMVHAALSLEGTCTGEHGVGTGKMKY 540
Query: 521 ILYSKSLETVQLMASIKNLLDPNHILNPYKVLP 553
+ +E ++ M IK++LDPN+I+NP K++P
Sbjct: 541 LEEELGVEALKTMKKIKSVLDPNNIMNPGKLIP 573
>Medtr7g107050.2 | D-lactate dehydrogenase (cytochrome) | HC |
chr7:43649030-43639622 | 20130731
Length = 486
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 172/366 (46%), Gaps = 29/366 (7%)
Query: 105 EILGQKNVV--QDEEKLSTVNTDWMHKYEGSSKLLLQPWNTDQVSQILKYCNSRSLAVVP 162
+I+ + NV DE + + HK +++ P + ++VS+I+K CN+ + +VP
Sbjct: 126 KIICEDNVSLDYDERYIHGKPQNSFHKAVNIPDVIVYPRSEEEVSKIVKSCNNHKIPIVP 185
Query: 163 QGGNTGLVGGSVPVFDEVIVSLSSMNKVISFDKVSGILVCEAGCILENIISFLDNEGFIM 222
GG T + G ++ V + +SSM +V + +V + G + +L+ G
Sbjct: 186 YGGATSIEGHTLSPNGGVCIDMSSMKRVKALHVDDMDVVVDPGIGWMELNEYLEPYGLFF 245
Query: 223 PLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGSVLGVEAVLADGTVLDMLKTLRKDNTG 282
PLD G S IGG +T G VRYG++ +V+ ++ V A+G ++ RK G
Sbjct: 246 PLDPGPGAS--IGGMCATRCSGSLAVRYGTMRDNVISLKVVFANGDIVKTASRARKSAAG 303
Query: 283 YDLKHLFIGSEGSLGIVTKVAILTPPKLSSV-NVALLACKDYNCCQKLLQEAKRKL--GE 339
YDL L IGSEG+LG++T+V + +L + +++A ++ + A + G
Sbjct: 304 YDLTRLVIGSEGTLGVITEVTL----RLQKIPQFSVVAMCNFPSVKDAADVAITTMNSGI 359
Query: 340 ILSAFEFLDSQSMNLVINHLEGARNP-LPTLHDFYVLIETTGSDESSDKQKLEAFLLHSM 398
+S E LD + IN G P PTL + E G++ + +Q + S
Sbjct: 360 QVSRVELLDEVQVK-AINIANGKNLPESPTL-----MFEFIGTEAYAREQTQIVRKIVSE 413
Query: 399 ENELISDGVLAQDINQASSFWRLREGITEALMRVGAVYK------YDLSIPLENLYNLVE 452
N SD V A++ W++R+ EAL A+ D+ +PL +L +++
Sbjct: 414 HNG--SDFVFAEEPEAKKELWKVRK---EALWACFAMEPNMEAMISDVCVPLSHLADIIS 468
Query: 453 EMRSRL 458
+ + L
Sbjct: 469 KSKKEL 474