Miyakogusa Predicted Gene
- Lj2g3v1706520.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1706520.1 tr|Q6LB28|Q6LB28_SOLLC Histone H3 OS=Solanum
lycopersicum GN=LOC544102 PE=2 SV=1,100,0,HISTONEH3,Histone H3;
HISTONE H3,Histone H3; HISTONE_H3_1,Histone H3; HISTONE_H3_2,Histone
H3; Histo,CUFF.37710.1
(128 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g061940.1 | core histone H2A/H2B/H3/H4 | HC | chr8:2586528... 259 5e-70
Medtr4g097175.1 | core histone H2A/H2B/H3/H4 | HC | chr4:4004401... 259 5e-70
Medtr1g023630.1 | core histone H2A/H2B/H3/H4 | HC | chr1:7595115... 259 5e-70
Medtr8g099430.1 | core histone H2A/H2B/H3/H4 | HC | chr8:4194351... 258 1e-69
Medtr4g097170.1 | core histone H2A/H2B/H3/H4 | HC | chr4:4003290... 256 3e-69
Medtr7g013610.1 | core histone H2A/H2B/H3/H4 | HC | chr7:3930639... 251 1e-67
Medtr8g103245.1 | core histone H2A/H2B/H3/H4 | HC | chr8:4348013... 251 2e-67
Medtr8g092820.1 | core histone H2A/H2B/H3/H4 | HC | chr8:3882234... 251 2e-67
Medtr8g092720.1 | core histone H2A/H2B/H3/H4 | HC | chr8:3879911... 251 2e-67
Medtr8g063500.1 | core histone H2A/H2B/H3/H4 | HC | chr8:2659175... 251 2e-67
Medtr7g059070.1 | core histone H2A/H2B/H3/H4 | HC | chr7:2131725... 251 2e-67
Medtr5g029820.1 | core histone H2A/H2B/H3/H4 | HC | chr5:1254753... 251 2e-67
Medtr5g029770.1 | core histone H2A/H2B/H3/H4 | HC | chr5:1253097... 251 2e-67
Medtr4g088150.1 | core histone H2A/H2B/H3/H4 | HC | chr4:3474835... 251 2e-67
Medtr4g065990.1 | core histone H2A/H2B/H3/H4 | HC | chr4:2486021... 251 2e-67
Medtr2g035230.1 | core histone H2A/H2B/H3/H4 | HC | chr2:1357600... 251 2e-67
Medtr2g082310.1 | core histone H2A/H2B/H3/H4 | HC | chr2:3458504... 243 3e-65
Medtr2g082340.1 | core histone H2A/H2B/H3/H4 | HC | chr2:3457933... 243 3e-65
Medtr2g082370.1 | core histone H2A/H2B/H3/H4 | HC | chr2:3457185... 228 9e-61
Medtr2g082400.1 | core histone H2A/H2B/H3/H4 | HC | chr2:3456303... 213 3e-56
Medtr7g013600.1 | core histone H2A/H2B/H3/H4 | HC | chr7:3928921... 177 2e-45
Medtr1g023630.2 | core histone H2A/H2B/H3/H4 | HC | chr1:7595031... 166 3e-42
Medtr7g023830.1 | core histone H2A/H2B/H3/H4 | LC | chr7:7804086... 159 4e-40
Medtr5g024630.1 | core histone H2A/H2B/H3/H4 | LC | chr5:9894399... 136 5e-33
Medtr7g023880.1 | core histone H2A/H2B/H3/H4 | LC | chr7:7813788... 133 5e-32
Medtr5g024530.1 | auxin efflux carrier family protein | LC | chr... 131 1e-31
Medtr0197s0100.1 | histone H3.2 | LC | scaffold0197:30698-31571 ... 128 1e-30
Medtr8g027840.1 | core histone H2A/H2B/H3/H4 | HC | chr8:1017186... 102 8e-23
Medtr8g105150.1 | core histone H2A/H2B/H3/H4 | HC | chr8:4434350... 95 1e-20
Medtr5g089120.1 | core histone H2A/H2B/H3/H4 | LC | chr5:3873512... 70 5e-13
Medtr5g024600.1 | histone H3.2 | LC | chr5:9882344-9882508 | 201... 67 5e-12
Medtr8g092740.1 | core histone H2A/H2B/H3/H4 | LC | chr8:3880516... 65 1e-11
Medtr4g128040.1 | core histone H2A/H2B/H3/H4 | LC | chr4:5329058... 63 7e-11
Medtr5g024550.1 | core histone H2A/H2B/H3/H4 | HC | chr5:9869700... 56 1e-08
Medtr4g070120.1 | 4Fe-4S-binding domain protein | LC | chr4:2639... 50 5e-07
>Medtr8g061940.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:25865281-25866119 | 20130731
Length = 136
Score = 259 bits (662), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 121 MPKDIQLA 128
>Medtr4g097175.1 | core histone H2A/H2B/H3/H4 | HC |
chr4:40044012-40045887 | 20130731
Length = 136
Score = 259 bits (662), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 121 MPKDIQLA 128
>Medtr1g023630.1 | core histone H2A/H2B/H3/H4 | HC |
chr1:7595115-7593841 | 20130731
Length = 136
Score = 259 bits (662), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 121 MPKDIQLA 128
>Medtr8g099430.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:41943518-41944336 | 20130731
Length = 136
Score = 258 bits (658), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/128 (99%), Positives = 128/128 (100%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTD 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 121 MPKDIQLA 128
>Medtr4g097170.1 | core histone H2A/H2B/H3/H4 | HC |
chr4:40032906-40036549 | 20130731
Length = 177
Score = 256 bits (654), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/128 (99%), Positives = 127/128 (99%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRK LATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 42 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 101
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 102 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 161
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 162 MPKDIQLA 169
>Medtr7g013610.1 | core histone H2A/H2B/H3/H4 | HC |
chr7:3930639-3929751 | 20130731
Length = 235
Score = 251 bits (641), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/128 (96%), Positives = 125/128 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 159
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 160 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 219
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 220 MPKDIQLA 227
>Medtr8g103245.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:43480135-43479451 | 20130731
Length = 136
Score = 251 bits (640), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/128 (96%), Positives = 125/128 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 121 MPKDIQLA 128
>Medtr8g092820.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:38822345-38821679 | 20130731
Length = 136
Score = 251 bits (640), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/128 (96%), Positives = 125/128 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 121 MPKDIQLA 128
>Medtr8g092720.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:38799119-38799848 | 20130731
Length = 136
Score = 251 bits (640), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/128 (96%), Positives = 125/128 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 121 MPKDIQLA 128
>Medtr8g063500.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:26591751-26592490 | 20130731
Length = 136
Score = 251 bits (640), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/128 (96%), Positives = 125/128 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 121 MPKDIQLA 128
>Medtr7g059070.1 | core histone H2A/H2B/H3/H4 | HC |
chr7:21317255-21317977 | 20130731
Length = 136
Score = 251 bits (640), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/128 (96%), Positives = 125/128 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 121 MPKDIQLA 128
>Medtr5g029820.1 | core histone H2A/H2B/H3/H4 | HC |
chr5:12547531-12546727 | 20130731
Length = 136
Score = 251 bits (640), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/128 (96%), Positives = 125/128 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 121 MPKDIQLA 128
>Medtr5g029770.1 | core histone H2A/H2B/H3/H4 | HC |
chr5:12530976-12531938 | 20130731
Length = 136
Score = 251 bits (640), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/128 (96%), Positives = 125/128 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 121 MPKDIQLA 128
>Medtr4g088150.1 | core histone H2A/H2B/H3/H4 | HC |
chr4:34748355-34749132 | 20130731
Length = 136
Score = 251 bits (640), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/128 (96%), Positives = 125/128 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 121 MPKDIQLA 128
>Medtr4g065990.1 | core histone H2A/H2B/H3/H4 | HC |
chr4:24860212-24860842 | 20130731
Length = 136
Score = 251 bits (640), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/128 (96%), Positives = 125/128 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 121 MPKDIQLA 128
>Medtr2g035230.1 | core histone H2A/H2B/H3/H4 | HC |
chr2:13576004-13576690 | 20130731
Length = 136
Score = 251 bits (640), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/128 (96%), Positives = 125/128 (97%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MPKDIQLA 128
MPKDIQLA
Sbjct: 121 MPKDIQLA 128
>Medtr2g082310.1 | core histone H2A/H2B/H3/H4 | HC |
chr2:34585044-34584634 | 20130731
Length = 136
Score = 243 bits (620), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/128 (92%), Positives = 123/128 (96%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTAR+ST GKAPRKQLATKAARKS PTTGG+KKPHRYRPGTVALREIRKYQK TE
Sbjct: 1 MARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQ+FKTDLRFQSHAVLALQEA EAYLVGLFEDTNLCAIHAKR+T+
Sbjct: 61 LLIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITV 120
Query: 121 MPKDIQLA 128
M KDIQLA
Sbjct: 121 MVKDIQLA 128
>Medtr2g082340.1 | core histone H2A/H2B/H3/H4 | HC |
chr2:34579339-34578850 | 20130731
Length = 136
Score = 243 bits (620), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/128 (92%), Positives = 123/128 (96%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTAR+ST GKAPRKQLATKAARKS PTTGG+KKPHRYRPGTVALREIRKYQK TE
Sbjct: 1 MARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLIRKLPFQRLVREIAQ+FKTDLRFQSHAVLALQEA EAYLVGLFEDTNLCAIHAKR+T+
Sbjct: 61 LLIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITV 120
Query: 121 MPKDIQLA 128
M KDIQLA
Sbjct: 121 MVKDIQLA 128
>Medtr2g082370.1 | core histone H2A/H2B/H3/H4 | HC |
chr2:34571857-34571417 | 20130731
Length = 146
Score = 228 bits (581), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 118/138 (85%), Positives = 120/138 (86%), Gaps = 10/138 (7%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGG----------VKKPHRYRPGTVALR 50
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHR+R GTVALR
Sbjct: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
Query: 51 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 110
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
Query: 111 CAIHAKRVTIMPKDIQLA 128
CAIHAKRVTIMPKDIQLA
Sbjct: 121 CAIHAKRVTIMPKDIQLA 138
>Medtr2g082400.1 | core histone H2A/H2B/H3/H4 | HC |
chr2:34563033-34562620 | 20130731
Length = 137
Score = 213 bits (543), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/129 (85%), Positives = 115/129 (89%), Gaps = 2/129 (1%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAP K LATK AR P GG+K+P R+RPGTVALREIRKYQKS++
Sbjct: 1 MARTKQTARKSTGGKAPTKVLATKIARNYKPK-GGLKRPRRFRPGTVALREIRKYQKSSD 59
Query: 61 LLIRKLPFQRLVREIAQ-DFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 119
LLIRKLPFQRLVREIA D K D RFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 60 LLIRKLPFQRLVREIAHVDLKPDFRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 119
Query: 120 IMPKDIQLA 128
IMPKDIQLA
Sbjct: 120 IMPKDIQLA 128
>Medtr7g013600.1 | core histone H2A/H2B/H3/H4 | HC |
chr7:3928921-3928580 | 20130731
Length = 113
Score = 177 bits (450), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/104 (83%), Positives = 93/104 (89%)
Query: 25 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
A RKSA TGG+KKPHR+RPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
Query: 85 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLA 128
FQ AV ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA
Sbjct: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLA 105
>Medtr1g023630.2 | core histone H2A/H2B/H3/H4 | HC |
chr1:7595031-7593883 | 20130731
Length = 109
Score = 166 bits (421), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/111 (77%), Positives = 90/111 (81%), Gaps = 2/111 (1%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLC 111
LLIRKLPFQRLVREIAQDFK + H ++ + LV L LC
Sbjct: 61 LLIRKLPFQRLVREIAQDFKVNFVTYLHKRFCVKSCSS--LVYLITSICLC 109
>Medtr7g023830.1 | core histone H2A/H2B/H3/H4 | LC |
chr7:7804086-7803679 | 20130731
Length = 135
Score = 159 bits (403), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MAR+KQTA K + A RK++ T A K T GVKK HRY GT+AL +IR+YQKST+
Sbjct: 1 MARSKQTACKLSCAGA-RKRVDTNAELKFKLATIGVKKEHRYHLGTIALLKIRRYQKSTK 59
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
LLI+KLPFQRLVREI Q+ K D RFQS AV ALQ +E YLVGLFED LCAIHAKRVTI
Sbjct: 60 LLIKKLPFQRLVREIVQNIKIDSRFQSRAVFALQVTSETYLVGLFEDAKLCAIHAKRVTI 119
Query: 121 MPKDIQLA 128
+P+DI+LA
Sbjct: 120 IPEDIRLA 127
>Medtr5g024630.1 | core histone H2A/H2B/H3/H4 | LC |
chr5:9894399-9894740 | 20130731
Length = 113
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 81/116 (69%), Gaps = 3/116 (2%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MA TKQTAR +TGGKAPRKQLATKAARKSA G VKKPH + GTVALREIR YQ+ST
Sbjct: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAK 116
++ FKT LRFQS AV A+QE EA V LFEDTN+CAIHAK
Sbjct: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
>Medtr7g023880.1 | core histone H2A/H2B/H3/H4 | LC |
chr7:7813788-7813342 | 20130731
Length = 148
Score = 133 bits (334), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 90/127 (70%), Gaps = 14/127 (11%)
Query: 3 RTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELL 62
R KQ ARKS APR ++ A K PTT GVKK ++ R+YQKST+LL
Sbjct: 18 RIKQIARKSPC--APRMRINPNAGLKIKPTTIGVKK-----------QDTRRYQKSTKLL 64
Query: 63 IRKLPFQRLVREIAQDFKTD-LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 121
++KLPFQRLVREI Q + D LRFQS AVLALQ A+EA+LVGL ED LCAIHAKR+T++
Sbjct: 65 MKKLPFQRLVREIVQKIEIDHLRFQSGAVLALQMASEAHLVGLLEDAKLCAIHAKRITVI 124
Query: 122 PKDIQLA 128
P+DIQLA
Sbjct: 125 PEDIQLA 131
>Medtr5g024530.1 | auxin efflux carrier family protein | LC |
chr5:9867551-9866652 | 20130731
Length = 154
Score = 131 bits (330), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 78/110 (70%), Gaps = 23/110 (20%)
Query: 19 KQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQD 78
++LATKAARKSAP TGGVKKPHR+RPGTVALREIRK K R L F R
Sbjct: 68 QKLATKAARKSAPATGGVKKPHRFRPGTVALREIRKSTK------RALSFLR-------- 113
Query: 79 FKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLA 128
+ V ALQEAA+ YLVGLFEDTNLCAIHAKRVTIMP+DIQLA
Sbjct: 114 ---------NDVSALQEAAKDYLVGLFEDTNLCAIHAKRVTIMPEDIQLA 154
>Medtr0197s0100.1 | histone H3.2 | LC | scaffold0197:30698-31571 |
20130731
Length = 140
Score = 128 bits (322), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/66 (96%), Positives = 65/66 (98%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKL 66
LLIRKL
Sbjct: 61 LLIRKL 66
>Medtr8g027840.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:10171868-10177072 | 20130731
Length = 130
Score = 102 bits (255), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Query: 37 KKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSHAVLALQE 95
KK R RPGTVALREIRK+QK+ LLI PF R V++I ++ R+ + A+LALQE
Sbjct: 28 KKKRRNRPGTVALREIRKFQKAVNLLIPCAPFVRCVKQITNQLSMEVSRWTAEALLALQE 87
Query: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 127
AAE +LV +FE LCA+HAKRVT+M KD++L
Sbjct: 88 AAEEHLVRMFEGGMLCALHAKRVTLMKKDLEL 119
>Medtr8g105150.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:44343504-44344109 | 20130731
Length = 72
Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 55/92 (59%), Gaps = 34/92 (36%)
Query: 37 KKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLA-LQE 95
KKPH YRPGTVALRE SHAVLA LQE
Sbjct: 11 KKPHHYRPGTVALRE---------------------------------RSSHAVLAVLQE 37
Query: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 127
AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL
Sbjct: 38 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 69
>Medtr5g089120.1 | core histone H2A/H2B/H3/H4 | LC |
chr5:38735121-38736214 | 20130731
Length = 92
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 38/47 (80%)
Query: 82 DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLA 128
+LRF S+AV ALQ+ E YLVGLFEDTNLC IHAKRVTI+ K ++A
Sbjct: 6 NLRFHSNAVSALQKVIEVYLVGLFEDTNLCTIHAKRVTIISKGKKVA 52
>Medtr5g024600.1 | histone H3.2 | LC | chr5:9882344-9882508 |
20130731
Length = 54
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRK 54
MARTK+T+RKS GGK P KQ+A K A K PTTGGVK HR+ +ALREIR+
Sbjct: 1 MARTKETSRKSIGGKEPCKQIAIKGAWKLDPTTGGVKMQHRFSLKIIALREIRR 54
>Medtr8g092740.1 | core histone H2A/H2B/H3/H4 | LC |
chr8:38805160-38807153 | 20130731
Length = 155
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/30 (96%), Positives = 29/30 (96%)
Query: 99 AYLVGLFEDTNLCAIHAKRVTIMPKDIQLA 128
AYLVGLFEDTN CAIHAKRVTIMPKDIQLA
Sbjct: 118 AYLVGLFEDTNPCAIHAKRVTIMPKDIQLA 147
>Medtr4g128040.1 | core histone H2A/H2B/H3/H4 | LC |
chr4:53290580-53291354 | 20130731
Length = 83
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 29/37 (78%)
Query: 79 FKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHA 115
KTDLRF S+ V ALQ+ EAYLVGLFEDTNLC IH
Sbjct: 20 LKTDLRFHSNVVSALQKVVEAYLVGLFEDTNLCTIHV 56
>Medtr5g024550.1 | core histone H2A/H2B/H3/H4 | HC |
chr5:9869700-9870123 | 20130731
Length = 67
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 45/107 (42%), Gaps = 49/107 (45%)
Query: 20 QLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF 79
++A K ++ + TG VKKPH + GTVALREIRKYQK+
Sbjct: 5 KIAKKKKKRGSLATGAVKKPHCFCHGTVALREIRKYQKNIN------------------- 45
Query: 80 KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
LCAIHAKRVTIMPKDI
Sbjct: 46 ------------------------------LCAIHAKRVTIMPKDIN 62
>Medtr4g070120.1 | 4Fe-4S-binding domain protein | LC |
chr4:26396413-26394214 | 20130731
Length = 132
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 25/27 (92%)
Query: 16 APRKQLATKAARKSAPTTGGVKKPHRY 42
APRKQLATKAARKSAPTTG VKKP R+
Sbjct: 105 APRKQLATKAARKSAPTTGRVKKPRRF 131