Miyakogusa Predicted Gene

Lj2g3v1705480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1705480.1 Non Characterized Hit- tr|D2V2Z9|D2V2Z9_NAEGR
Putative uncharacterized protein OS=Naegleria gruberi
,27.6,0.0000000002, ,NODE_41717_length_1198_cov_68.346413.path1.1
         (287 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g435540.1 | hypothetical protein | HC | chr2:13731977-1373...   429   e-120
Medtr4g120420.1 | hypothetical protein | HC | chr4:49918770-4992...   327   8e-90

>Medtr2g435540.1 | hypothetical protein | HC |
           chr2:13731977-13730025 | 20130731
          Length = 241

 Score =  429 bits (1104), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/239 (88%), Positives = 225/239 (94%)

Query: 49  SSPPTVTELIDESHFSSLLSPDGYISICGFGSLLSERSARSTFPDLLNFRTARLNHFRRV 108
           SSPPT TEL  +S FSSLLSPD +ISICGFGSLLSERSARSTFPDL+NFRTA+LNHFRRV
Sbjct: 3   SSPPTFTELNSDSDFSSLLSPDDHISICGFGSLLSERSARSTFPDLINFRTAKLNHFRRV 62

Query: 109 FAHVAPVFFERGIAKPETMEISSLSVEPCDGETLVVTVFEIGKSEIPDYIKREVEFRFLA 168
           FAHVAPVFFERGIAKPETMEISSLSVE C+GETLVVTVFEI KSEIPD+IKREVEFRFLA
Sbjct: 63  FAHVAPVFFERGIAKPETMEISSLSVEQCEGETLVVTVFEIRKSEIPDFIKREVEFRFLA 122

Query: 169 VVPETLDGKPFEFPAVLCARYSDEEFFKIRCKGDKEIYFQQYGRWNIDKIWRDDVLPCRV 228
           V+PETLDGK F+FPAVLCARYSDEEFF IRCKG+KE+ FQQYGRWNIDKIWRDD+ PCRV
Sbjct: 123 VLPETLDGKSFDFPAVLCARYSDEEFFNIRCKGNKEMLFQQYGRWNIDKIWRDDIFPCRV 182

Query: 229 YLRHCVLAAKNLDDTAYNNFLDHTYLADRKTTIREYLATTGSGIMEEEPPKSVKYRYGG 287
           YLRHCVLAAKNL DTAYNNFLDHTYLADRKTTIREYL T GSGIMEEEPP+S+K+RYGG
Sbjct: 183 YLRHCVLAAKNLGDTAYNNFLDHTYLADRKTTIREYLETAGSGIMEEEPPESLKFRYGG 241


>Medtr4g120420.1 | hypothetical protein | HC |
           chr4:49918770-49921539 | 20130731
          Length = 237

 Score =  327 bits (838), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 150/218 (68%), Positives = 181/218 (83%)

Query: 70  DGYISICGFGSLLSERSARSTFPDLLNFRTARLNHFRRVFAHVAPVFFERGIAKPETMEI 129
           DGYISICG+GSLLSE+SARSTFP L+NFRTARL  FRR+F+ V   FF  GIA  +T E+
Sbjct: 20  DGYISICGYGSLLSEKSARSTFPHLINFRTARLTGFRRLFSVVGAFFFNHGIANLKTQEV 79

Query: 130 SSLSVEPCDGETLVVTVFEIGKSEIPDYIKREVEFRFLAVVPETLDGKPFEFPAVLCARY 189
           + LSVEPC GET+++TVF+I KSEIP +IKRE E+RFL+V PE+LDG PF  PAVLCA Y
Sbjct: 80  AGLSVEPCQGETIIITVFDIKKSEIPAFIKREREYRFLSVFPESLDGVPFTSPAVLCASY 139

Query: 190 SDEEFFKIRCKGDKEIYFQQYGRWNIDKIWRDDVLPCRVYLRHCVLAAKNLDDTAYNNFL 249
           +DEEFFK +C   +EIYF+QYG +NI KIWRDD LPCRVYLRHCVLAAK+L D AY+NFL
Sbjct: 140 TDEEFFKFKCCEGREIYFKQYGEYNIHKIWRDDALPCRVYLRHCVLAAKSLGDEAYSNFL 199

Query: 250 DHTYLADRKTTIREYLATTGSGIMEEEPPKSVKYRYGG 287
           DHT++ADR+TTIR+Y    G+ IM+EEPP+S+K RYGG
Sbjct: 200 DHTFIADRETTIRKYFEKMGTSIMDEEPPESLKTRYGG 237