Miyakogusa Predicted Gene

Lj2g3v1705450.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1705450.1 Non Characterized Hit- tr|Q8GZ09|Q8GZ09_ARATH
Putative uncharacterized protein OS=Arabidopsis thalia,59.26,2e-18,
,CUFF.37692.1
         (210 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g021750.1 | hypothetical protein | HC | chr5:8471364-84760...   347   5e-96
Medtr5g021780.1 | hypothetical protein | HC | chr5:8480474-84845...   134   5e-32

>Medtr5g021750.1 | hypothetical protein | HC | chr5:8471364-8476068
           | 20130731
          Length = 206

 Score =  347 bits (889), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 173/207 (83%), Positives = 190/207 (91%), Gaps = 2/207 (0%)

Query: 1   MGASESTFSSAQTAGDKITTVSERLEVSDPILERLKSLKITPPILTSPPQTEGSLTDILV 60
           MGASESTFS+ QT  DKITTV+ERLE SDPILERLKSLKITPP+LT+PP TEGSLTDILV
Sbjct: 1   MGASESTFSNVQTTDDKITTVTERLETSDPILERLKSLKITPPVLTNPP-TEGSLTDILV 59

Query: 61  RKPSSSSASATVNPKVLLELFSMYRDFQGEKVHEISKRQEEIENRIEVADALAIKLLQRF 120
           R+PS+S ASATVNPKVLLELFSMYRD+Q E+V EISK+QE+IENRIEVADALA+KLLQR+
Sbjct: 60  RRPSTSQASATVNPKVLLELFSMYRDWQEERVEEISKKQEDIENRIEVADALAVKLLQRY 119

Query: 121 NHSMSTMKTASQHLSGVHSLQVEIGELKGRLTEVISNCDALCKRIEAEGPESLRSSIKPF 180
           NHS STMK+AS+HLSGV+SLQVEIGELKGRLTEVISNCDALCKRIEAEGPESLRSSIKPF
Sbjct: 120 NHSTSTMKSASRHLSGVNSLQVEIGELKGRLTEVISNCDALCKRIEAEGPESLRSSIKPF 179

Query: 181 AIATAADQEKCSSSLNSQTVSETHPPA 207
           AIA  ADQE CSSS + QTV +T PP 
Sbjct: 180 AIA-KADQEICSSSTSLQTVKKTSPPG 205


>Medtr5g021780.1 | hypothetical protein | HC |
          chr5:8480474-8484563 | 20130731
          Length = 107

 Score =  134 bits (337), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 66/83 (79%), Positives = 76/83 (91%), Gaps = 1/83 (1%)

Query: 17 KITTVSERLEVSDPILERLKSLKITPPILTSPPQTEGSLTDILVRKPSSSSASATVNPKV 76
          KITT++E+LE SDPILERLKSLKITPPILT+PP TEGSLTDILVR+P  S ASATVNPKV
Sbjct: 7  KITTITEQLETSDPILERLKSLKITPPILTNPP-TEGSLTDILVRRPWMSQASATVNPKV 65

Query: 77 LLELFSMYRDFQGEKVHEISKRQ 99
          LL+LFSMYRD+Q E+V EIS++Q
Sbjct: 66 LLKLFSMYRDWQEERVEEISRKQ 88