Miyakogusa Predicted Gene

Lj2g3v1695200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1695200.1 Non Characterized Hit- tr|H9V2B0|H9V2B0_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,64.18,0.0000000000002,FAMILY NOT NAMED,NULL; ARM
repeat,Armadillo-type fold; no description,Armadillo-like helical;
seg,NU,NODE_29960_length_1288_cov_94.891304.path1.1
         (320 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g022240.1 | armadillo repeat only protein | HC | chr5:8755...   488   e-138
Medtr8g075770.1 | armadillo repeat only protein | HC | chr8:3203...   403   e-112
Medtr4g073830.1 | armadillo repeat only protein | HC | chr4:2803...   369   e-102
Medtr5g033190.1 | armadillo repeat only protein | HC | chr5:1430...   203   2e-52
Medtr4g105110.1 | armadillo repeat only 1 protein | HC | chr4:43...   199   4e-51
Medtr4g105110.2 | armadillo repeat only 1 protein | HC | chr4:43...   199   4e-51

>Medtr5g022240.1 | armadillo repeat only protein | HC |
           chr5:8755760-8758476 | 20130731
          Length = 687

 Score =  488 bits (1257), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 241/271 (88%), Positives = 254/271 (93%), Gaps = 2/271 (0%)

Query: 52  YSHSGINMKGRDNEDPETKASMKEMAARALWHLAKGNVPICRSITESRALLCFAVLLEKG 111
           YSHSGINMKGR++ED ETKASMKEMAARALWHLAKGNV ICRSITESRALLCF+VLLEKG
Sbjct: 417 YSHSGINMKGRESEDAETKASMKEMAARALWHLAKGNVAICRSITESRALLCFSVLLEKG 476

Query: 112 EEKVQYNSAMAVMEITAVAEKDADLRKSAFKPNSPACKAVVDQLLKIIEKADSDLLIPCV 171
            E VQYNSAMA+MEITAVAEKDA+LRKSAFKPNSPACKAVVDQ+LKIIEKADSDLLIPCV
Sbjct: 477 PEAVQYNSAMALMEITAVAEKDAELRKSAFKPNSPACKAVVDQVLKIIEKADSDLLIPCV 536

Query: 172 SAIGNLARTFRATETRMIGPLVRLLDEREAEVYREASIALTKFACTDNYLHLDHSKAIIT 231
            AIGNLARTF+ATETRMIGPLV+LLDEREAEV REASIAL KFA ++NYLH+DHS AII+
Sbjct: 537 KAIGNLARTFKATETRMIGPLVKLLDEREAEVSREASIALRKFAGSENYLHVDHSNAIIS 596

Query: 232 AGGAKHLIQLVYFGEQMVQIPALVLLSYIALHVPDSEELAQDEVLGVLEWASKQSSMTHD 291
           AGGAKHLIQLVYFGEQMVQIPALVLLSYIALHVPDSEELA  EVLGVLEWASKQS M HD
Sbjct: 597 AGGAKHLIQLVYFGEQMVQIPALVLLSYIALHVPDSEELALAEVLGVLEWASKQSFMQHD 656

Query: 292 ETLEALLQESKSRLELYQSRGSR--FHKLHQ 320
           ETLE LLQE+KSRLELYQSRGSR   HKLHQ
Sbjct: 657 ETLEELLQEAKSRLELYQSRGSRGFHHKLHQ 687


>Medtr8g075770.1 | armadillo repeat only protein | HC |
           chr8:32032667-32029788 | 20130731
          Length = 667

 Score =  403 bits (1035), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/300 (71%), Positives = 244/300 (81%), Gaps = 18/300 (6%)

Query: 23  SLANGIGN-DGKQGXXXXXXXXXXXXXXXXYSHSGINMKGRDNEDPETKASMKEMAARAL 81
           S+ NG GN + KQG                YS+SGIN+KGR+ ED E+KA MK MAA+AL
Sbjct: 384 SIPNGNGNGNTKQG----------------YSYSGINVKGRELEDAESKADMKAMAAKAL 427

Query: 82  WHLAKGNVPICRSITESRALLCFAVLLEKGEEKVQYNSAMAVMEITAVAEKDADLRKSAF 141
            +LAKGN  ICRSITESRALLCFA+LLEKG E+V+YNSA+A+ EITAVAEKD +LR+SAF
Sbjct: 428 RYLAKGNSAICRSITESRALLCFAILLEKGPEEVKYNSALALKEITAVAEKDPELRRSAF 487

Query: 142 KPNSPACKAVVDQLLKIIEKADSDLLIPCVSAIGNLARTFRATETRMIGPLVRLLDEREA 201
           KPN+PACKAVVDQ++ II+K D  LLIPC+  IG+LARTFRATETR+IGPLVRLLDEREA
Sbjct: 488 KPNTPACKAVVDQVIDIIDKEDKRLLIPCIKVIGSLARTFRATETRIIGPLVRLLDEREA 547

Query: 202 EVYREASIALTKFACTDNYLHLDHSKAIITAGGAKHLIQLVYFGEQMVQIPALVLLSYIA 261
           EV +EA+ +L KFA  DNYLHLDH KAII+ GG K L+QLVY GE  VQ  ALVLLSYIA
Sbjct: 548 EVSKEAADSLAKFASNDNYLHLDHCKAIISFGGVKPLVQLVYLGEPPVQYSALVLLSYIA 607

Query: 262 LHVPDSEELAQDEVLGVLEWASKQSSMTHDETLEALLQESKSRLELYQSRGSR-FHKLHQ 320
           LHVPDSEELA+ E+LGVLEWASKQ +M HDE +EALLQESKSRLELYQSRGSR F KLHQ
Sbjct: 608 LHVPDSEELAKAEILGVLEWASKQPNMAHDEAIEALLQESKSRLELYQSRGSRGFQKLHQ 667


>Medtr4g073830.1 | armadillo repeat only protein | HC |
           chr4:28037116-28035155 | 20130731
          Length = 653

 Score =  369 bits (947), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 184/266 (69%), Positives = 218/266 (81%), Gaps = 2/266 (0%)

Query: 53  SHSGINMKGRDNEDPETKASMKEMAARALWHLAKGNVPICRSITESRALLCFAVLLEKGE 112
           S +G ++KGR+ EDPETKA MK MAARALW L + NV IC +ITESRALLCFAVLLEKG 
Sbjct: 388 SIAGTSIKGREFEDPETKAQMKAMAARALWQLCRRNVTICHTITESRALLCFAVLLEKGT 447

Query: 113 EKVQYNSAMAVMEITAVAEKDADLRKSAFKPNSPACKAVVDQLLKIIEKADS-DLLIPCV 171
           + VQ+ SAMA+MEIT+VA + A+LR+SAFKP +PA KAVV+Q LK++EK DS DLLIPCV
Sbjct: 448 DDVQHYSAMALMEITSVAAEHAELRRSAFKPTAPAAKAVVEQFLKVVEKGDSEDLLIPCV 507

Query: 172 SAIGNLARTFRATETRMIGPLVRLLDEREAEVYREASIALTKFACTDNYLHLDHSKAIIT 231
            AIGNLARTFRATETR I PLV+LLDE E  +  EAS AL KFA TDNYLH  H  AII 
Sbjct: 508 KAIGNLARTFRATETRFIAPLVKLLDETEPVISTEASKALIKFAETDNYLHETHCNAIIE 567

Query: 232 AGGAKHLIQLVYFGEQMVQIPALVLLSYIALHVPDSEELAQDEVLGVLEWASKQSSMTHD 291
           AGGAKHLIQLVYFGEQMVQIP+L+LL ++ALHVP +E L Q+EVL VLEW +KQ+ +  +
Sbjct: 568 AGGAKHLIQLVYFGEQMVQIPSLLLLCFVALHVPKNETLGQEEVLIVLEWCTKQTHIMAE 627

Query: 292 ETLEALLQESKSRLELYQSRGSR-FH 316
           + +EA+L E+KSRLELYQSRG+R FH
Sbjct: 628 KKIEAILPEAKSRLELYQSRGTRGFH 653


>Medtr5g033190.1 | armadillo repeat only protein | HC |
           chr5:14303776-14306487 | 20130731
          Length = 612

 Score =  203 bits (516), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/259 (45%), Positives = 160/259 (61%), Gaps = 4/259 (1%)

Query: 53  SHSGINMKGRDNEDPETKASMKEMAARALWHLAKGNVPICRSITESRALLCFAVLLEKGE 112
           S  G   K R+NEDP  K  +K   A ALW LA G+V   R ITE++ +LC A ++EK +
Sbjct: 346 SRGGNYRKERENEDPAVKLQLKISCAEALWMLAAGSVSNSRKITETKGMLCLAKIVEKEQ 405

Query: 113 EKVQYNSAMAVMEITAVAEKDADLRKSAFKPNSPACKAVVDQLLKIIEKADSDLL-IPCV 171
            ++Q N  M +MEITA AE +ADLR+ AFK NSP  KAVV+QLL+I+++ DS L+ IP +
Sbjct: 406 GELQRNCLMTIMEITAAAESNADLRRGAFKTNSPPAKAVVEQLLRILKEVDSPLMQIPAI 465

Query: 172 SAIGNLARTFRATETRMIGPLVRLLDEREAEVYREASIALTKFACTDNYLHLDHSKAIIT 231
            +IG+LARTF A ETR+I PLV  L  R+  V  EA++ALTKFA  DN+L+++HSK II 
Sbjct: 466 KSIGSLARTFPARETRVIEPLVAQLSNRDINVADEAAVALTKFASPDNFLYVEHSKKIIE 525

Query: 232 AGGAKHLIQLVYFGEQMVQIPALVLLSYIALHVPDSEELAQDEVLGVLEWASKQSSMTHD 291
                 +++L+   E      AL LL Y+ALH   SE L Q  VL  LE A +     H 
Sbjct: 526 FDAVPAVMKLLRSNEVNQMHHALTLLCYLALHAGSSESLEQARVLLALEGADRTILPQH- 584

Query: 292 ETLEALLQESKSRLELYQS 310
             +  L+ ++   L LY +
Sbjct: 585 --IRDLVSKAIGHLNLYHA 601


>Medtr4g105110.1 | armadillo repeat only 1 protein | HC |
           chr4:43549841-43551628 | 20130731
          Length = 595

 Score =  199 bits (505), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 111/264 (42%), Positives = 164/264 (62%), Gaps = 5/264 (1%)

Query: 56  GINMKGRD-NEDPETKASMKEMAARALWHLAKGNVPICRSITESRALLCFAVLLEKGEEK 114
           G N +GR+ ++ PE +  +K   A+ALW L+KG +  C+ ITE++ L+C A ++E    +
Sbjct: 328 GSNCRGREADQSPELRNDVKVSCAKALWKLSKGCLLACKRITETKGLICLAKMIESESGE 387

Query: 115 VQYNSAMAVMEITAVAEKDADLRKSAFKPNSPACKAVVDQLLKII-EKADSDLLIPCVSA 173
           ++ N  MAVMEITAVAE +ADLR+ AFKP +P  KAV+DQL K++ E+ DS LLIP + +
Sbjct: 388 LRLNCLMAVMEITAVAESNADLRRGAFKPTAPVAKAVLDQLFKVVREERDSTLLIPAIKS 447

Query: 174 IGNLARTFRATETRMIGPLVRLLDEREAEVYREASIALTKFACTDNYLHLDHSKAIITAG 233
           IG+LAR F      ++GPLV  L  ++  V  E  +AL KF CTDNY  +DHSKAI+   
Sbjct: 448 IGSLARNFPGKVPHVLGPLVAHLGNKDINVASEVIVALIKFVCTDNYNRVDHSKAILELD 507

Query: 234 GAKHLIQLVYFGEQMVQIPALVLLSYIALHVPDSEELAQDEVLGVLEWASKQSSMTHDET 293
           G   L+ L+   +   Q+  L LL Y+AL+V +S+ L Q+ VL  +E  ++   +  +  
Sbjct: 508 GIPKLMSLLKIKDGH-QVYGLKLLCYLALNVGNSKVLEQERVLSTIEKLAR-PVLAQNPD 565

Query: 294 LEALLQESKSRLELYQSRGSRFHK 317
           L+ L   +   L LYQS G + H+
Sbjct: 566 LKELFANAIHHLSLYQS-GVQLHR 588


>Medtr4g105110.2 | armadillo repeat only 1 protein | HC |
           chr4:43549436-43551628 | 20130731
          Length = 596

 Score =  199 bits (505), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 111/264 (42%), Positives = 164/264 (62%), Gaps = 5/264 (1%)

Query: 56  GINMKGRD-NEDPETKASMKEMAARALWHLAKGNVPICRSITESRALLCFAVLLEKGEEK 114
           G N +GR+ ++ PE +  +K   A+ALW L+KG +  C+ ITE++ L+C A ++E    +
Sbjct: 329 GSNCRGREADQSPELRNDVKVSCAKALWKLSKGCLLACKRITETKGLICLAKMIESESGE 388

Query: 115 VQYNSAMAVMEITAVAEKDADLRKSAFKPNSPACKAVVDQLLKII-EKADSDLLIPCVSA 173
           ++ N  MAVMEITAVAE +ADLR+ AFKP +P  KAV+DQL K++ E+ DS LLIP + +
Sbjct: 389 LRLNCLMAVMEITAVAESNADLRRGAFKPTAPVAKAVLDQLFKVVREERDSTLLIPAIKS 448

Query: 174 IGNLARTFRATETRMIGPLVRLLDEREAEVYREASIALTKFACTDNYLHLDHSKAIITAG 233
           IG+LAR F      ++GPLV  L  ++  V  E  +AL KF CTDNY  +DHSKAI+   
Sbjct: 449 IGSLARNFPGKVPHVLGPLVAHLGNKDINVASEVIVALIKFVCTDNYNRVDHSKAILELD 508

Query: 234 GAKHLIQLVYFGEQMVQIPALVLLSYIALHVPDSEELAQDEVLGVLEWASKQSSMTHDET 293
           G   L+ L+   +   Q+  L LL Y+AL+V +S+ L Q+ VL  +E  ++   +  +  
Sbjct: 509 GIPKLMSLLKIKDGH-QVYGLKLLCYLALNVGNSKVLEQERVLSTIEKLAR-PVLAQNPD 566

Query: 294 LEALLQESKSRLELYQSRGSRFHK 317
           L+ L   +   L LYQS G + H+
Sbjct: 567 LKELFANAIHHLSLYQS-GVQLHR 589