Miyakogusa Predicted Gene
- Lj2g3v1691070.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1691070.1 tr|B9NAQ8|B9NAQ8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_787432 PE=4
SV=1,42.64,7e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Senescence,Senescence/spartin-associated,CUFF.37657.1
(229 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g022450.1 | senescence/dehydration-associated-like protein... 347 4e-96
Medtr5g022450.2 | senescence/dehydration-associated-like protein... 332 1e-91
Medtr8g075350.1 | senescence/dehydration-associated-like protein... 320 6e-88
Medtr4g073530.1 | senescence/dehydration-associated-like protein... 286 1e-77
Medtr4g073530.2 | senescence/dehydration-associated-like protein... 238 4e-63
Medtr8g102510.1 | senescence/dehydration-associated-like protein... 131 6e-31
Medtr6g088680.1 | senescence/dehydration-associated-like protein... 130 1e-30
Medtr8g102510.2 | senescence/dehydration-associated-like protein... 105 2e-23
Medtr6g088680.2 | senescence/dehydration-associated-like protein... 90 2e-18
Medtr8g102510.3 | senescence/dehydration-associated-like protein... 89 2e-18
>Medtr5g022450.1 | senescence/dehydration-associated-like protein |
HC | chr5:8850707-8856565 | 20130731
Length = 460
Score = 347 bits (891), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 167/208 (80%), Positives = 186/208 (89%), Gaps = 1/208 (0%)
Query: 1 MMEERSAAYWTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVMKKR 60
MME + AAYWTTLAPNVE+YS T ARMIA+GSGHV+KGILWCGDVT+DRL WGN+VMKKR
Sbjct: 231 MMEGQCAAYWTTLAPNVEEYSGTAARMIASGSGHVIKGILWCGDVTMDRLQWGNQVMKKR 290
Query: 61 LSSGSR-SEISPQTLKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVGKKFF 119
+++G R ++ISP+TLKRIRRVKRVT+MT+KVANGLLSGVVKVSGFFTSS+VNSK GKKFF
Sbjct: 291 MAAGERDAQISPETLKRIRRVKRVTKMTQKVANGLLSGVVKVSGFFTSSVVNSKAGKKFF 350
Query: 120 SLLPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAEATSEGLNXX 179
SLLPGE+VLASLDGFSKV DAVE+AGKNVMSTSSTVTTELVDHRYGE+AA AT+EGLN
Sbjct: 351 SLLPGEIVLASLDGFSKVFDAVEIAGKNVMSTSSTVTTELVDHRYGEEAAHATNEGLNAA 410
Query: 180 XXXXXXXXXXFKIRKAINPKSVFKPTTL 207
FKIRKAINPKSVFKPTTL
Sbjct: 411 GHALGTAWAAFKIRKAINPKSVFKPTTL 438
>Medtr5g022450.2 | senescence/dehydration-associated-like protein |
HC | chr5:8850707-8856565 | 20130731
Length = 454
Score = 332 bits (852), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 161/208 (77%), Positives = 181/208 (87%), Gaps = 7/208 (3%)
Query: 1 MMEERSAAYWTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVMKKR 60
MME + AAYWTTLAPNVE+YS T ARMIA+GSGHV+KGILWCGDVT+DRL WGN+VMKKR
Sbjct: 231 MMEGQCAAYWTTLAPNVEEYSGTAARMIASGSGHVIKGILWCGDVTMDRLQWGNQVMKKR 290
Query: 61 LSSGSR-SEISPQTLKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVGKKFF 119
+++G R ++ISP+TLKRIRRVKRVT+MT+KVANGLLSGVVKVSGFFTSS+VNSK GKKFF
Sbjct: 291 MAAGERDAQISPETLKRIRRVKRVTKMTQKVANGLLSGVVKVSGFFTSSVVNSKAGKKFF 350
Query: 120 SLLPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAEATSEGLNXX 179
SLLPGE+VLASLDGF +E+AGKNVMSTSSTVTTELVDHRYGE+AA AT+EGLN
Sbjct: 351 SLLPGEIVLASLDGF------IEIAGKNVMSTSSTVTTELVDHRYGEEAAHATNEGLNAA 404
Query: 180 XXXXXXXXXXFKIRKAINPKSVFKPTTL 207
FKIRKAINPKSVFKPTTL
Sbjct: 405 GHALGTAWAAFKIRKAINPKSVFKPTTL 432
>Medtr8g075350.1 | senescence/dehydration-associated-like protein |
HC | chr8:31871181-31867632 | 20130731
Length = 477
Score = 320 bits (821), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 149/205 (72%), Positives = 174/205 (84%)
Query: 1 MMEERSAAYWTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVMKKR 60
+MEER AAYWTTLAPNVEDYS T A++IAAGSG +VKGILWCGDVTVDRL WGN++MKK+
Sbjct: 253 LMEERCAAYWTTLAPNVEDYSGTAAKLIAAGSGQLVKGILWCGDVTVDRLKWGNEIMKKK 312
Query: 61 LSSGSRSEISPQTLKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVGKKFFS 120
+ +++EI+PQTLKRI+R K+VT+MTE VA G+L+GVVKVSGFFTSS+ NSK GKKFF
Sbjct: 313 MGPPTQAEINPQTLKRIQRAKKVTKMTESVAKGVLTGVVKVSGFFTSSVANSKAGKKFFK 372
Query: 121 LLPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAEATSEGLNXXX 180
LPGEVVLASLDGFSK+CDAVEVAGKNVMSTS+TVTTE+V HRYGE+AA ATSEGL+
Sbjct: 373 FLPGEVVLASLDGFSKLCDAVEVAGKNVMSTSNTVTTEIVHHRYGEEAANATSEGLDAAG 432
Query: 181 XXXXXXXXXFKIRKAINPKSVFKPT 205
FKIR+A+NPKS KPT
Sbjct: 433 HAVGTAWAAFKIRQALNPKSALKPT 457
>Medtr4g073530.1 | senescence/dehydration-associated-like protein |
HC | chr4:27879029-27877517 | 20130731
Length = 404
Score = 286 bits (731), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 164/206 (79%), Gaps = 1/206 (0%)
Query: 3 EERSAAYWTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVMKKRLS 62
E +AAYWTTLAPNVEDYS R IAAGSG +++GILWCGDVTVDRL WG+ MKKRL
Sbjct: 185 ENSAAAYWTTLAPNVEDYSGRFGRWIAAGSGQMIRGILWCGDVTVDRLKWGDDFMKKRLQ 244
Query: 63 SGS-RSEISPQTLKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVGKKFFSL 121
GS +S+ISP L ++ VK++T+M+EKVA G+LSG VKVSGF TSS+VNSK GKKFFS
Sbjct: 245 PGSSQSQISPLALNSMKSVKKLTKMSEKVALGVLSGAVKVSGFLTSSVVNSKPGKKFFSF 304
Query: 122 LPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAEATSEGLNXXXX 181
LPGEV+LASLDGF++VCDAVEVAG+NVMSTSS VTT LV H+YGE+AAE T+EG +
Sbjct: 305 LPGEVLLASLDGFNRVCDAVEVAGRNVMSTSSVVTTGLVSHKYGEKAAEITNEGFDAAGH 364
Query: 182 XXXXXXXXFKIRKAINPKSVFKPTTL 207
FK+RKA+NPKSV KPTTL
Sbjct: 365 AIGTAWAVFKLRKALNPKSVIKPTTL 390
>Medtr4g073530.2 | senescence/dehydration-associated-like protein |
HC | chr4:27879062-27877766 | 20130731
Length = 349
Score = 238 bits (607), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/162 (70%), Positives = 135/162 (83%), Gaps = 1/162 (0%)
Query: 3 EERSAAYWTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVMKKRLS 62
E +AAYWTTLAPNVEDYS R IAAGSG +++GILWCGDVTVDRL WG+ MKKRL
Sbjct: 188 ENSAAAYWTTLAPNVEDYSGRFGRWIAAGSGQMIRGILWCGDVTVDRLKWGDDFMKKRLQ 247
Query: 63 SGS-RSEISPQTLKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVGKKFFSL 121
GS +S+ISP L ++ VK++T+M+EKVA G+LSG VKVSGF TSS+VNSK GKKFFS
Sbjct: 248 PGSSQSQISPLALNSMKSVKKLTKMSEKVALGVLSGAVKVSGFLTSSVVNSKPGKKFFSF 307
Query: 122 LPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHR 163
LPGEV+LASLDGF++VCDAVEVAG+NVMSTSS VTT LV H+
Sbjct: 308 LPGEVLLASLDGFNRVCDAVEVAGRNVMSTSSVVTTGLVSHK 349
>Medtr8g102510.1 | senescence/dehydration-associated-like protein |
HC | chr8:43159649-43161852 | 20130731
Length = 375
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 112/205 (54%), Gaps = 14/205 (6%)
Query: 10 WTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVMKKRLSSGSRSEI 69
W AP VEDY+ +++IA G+G +VKGI C + +++ G +++ + +
Sbjct: 154 WKEFAPRVEDYNHFLSKLIAGGTGQIVKGIFICSNAYTNKVQKGGEMILNSHADKKNGVV 213
Query: 70 SPQT--------------LKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVG 115
+ ++ K ++RV+++++MTEK++ LLSGV VSG LV S+ G
Sbjct: 214 AWESKSNKNVGASKKNKINKNLKRVRKLSKMTEKLSKSLLSGVGIVSGTVIGPLVKSQPG 273
Query: 116 KKFFSLLPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAEATSEG 175
K F +LPGEV+LASLD +KV DA E A K +S +S + +V +R+G+ A EAT
Sbjct: 274 KAFLRMLPGEVLLASLDAVNKVLDAAEAAEKQTLSATSKAASRMVSNRFGDNAGEATEHV 333
Query: 176 LNXXXXXXXXXXXXFKIRKAINPKS 200
FKIRKAINP S
Sbjct: 334 FATAGHAANTAWNVFKIRKAINPAS 358
>Medtr6g088680.1 | senescence/dehydration-associated-like protein |
HC | chr6:33818763-33815362 | 20130731
Length = 374
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 1 MMEERSAAYWTTLAPNVEDYSSTTARMIAAGSGHVVKGILWC----------GDVTV--- 47
+ +++S W AP VE+Y+ A+ IA G+G +VKGI C G T+
Sbjct: 144 LSKKKSDLDWEEFAPCVENYNHFLAKAIAGGTGQIVKGIFMCSNAYTNQVQKGGQTILNS 203
Query: 48 --DRLNWGNKVMKKRLSSGSRSEISPQTL-KRIRRVKRVTRMTEKVANGLLSGVVKVSGF 104
D+ N GN ++K+ +++ + + + + + RV+++T MTE ++ LL+GV VSG
Sbjct: 204 PSDKKNGGNGMVKESMNNKTAAATKNNRMNENLIRVRKLTNMTEHLSKSLLNGVGIVSGS 263
Query: 105 FTSSLVNSKVGKKFFSLLPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRY 164
+ ++ S+ G+ F +LPGEV+LASLD +KV +A E A K +S +S T +V +RY
Sbjct: 264 LMAPVLKSQPGQAFLKMLPGEVLLASLDAVNKVFEAAEAAEKQTLSATSQAATRMVSNRY 323
Query: 165 GEQAAEATSEGLNXXXXXXXXXXXXFKIRKAINPKS 200
GE+A EAT KIRKAINP S
Sbjct: 324 GEEAGEATEHVFATAGHAANTAWNVSKIRKAINPAS 359
>Medtr8g102510.2 | senescence/dehydration-associated-like protein |
HC | chr8:43159649-43161393 | 20130731
Length = 321
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 95/168 (56%), Gaps = 14/168 (8%)
Query: 10 WTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVMKKRLSSGSRSEI 69
W AP VEDY+ +++IA G+G +VKGI C + +++ G +++ + +
Sbjct: 154 WKEFAPRVEDYNHFLSKLIAGGTGQIVKGIFICSNAYTNKVQKGGEMILNSHADKKNGVV 213
Query: 70 SPQT--------------LKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVG 115
+ ++ K ++RV+++++MTEK++ LLSGV VSG LV S+ G
Sbjct: 214 AWESKSNKNVGASKKNKINKNLKRVRKLSKMTEKLSKSLLSGVGIVSGTVIGPLVKSQPG 273
Query: 116 KKFFSLLPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHR 163
K F +LPGEV+LASLD +KV DA E A K +S +S + +V +R
Sbjct: 274 KAFLRMLPGEVLLASLDAVNKVLDAAEAAEKQTLSATSKAASRMVSNR 321
>Medtr6g088680.2 | senescence/dehydration-associated-like protein |
HC | chr6:33818763-33815362 | 20130731
Length = 295
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 86/150 (57%), Gaps = 16/150 (10%)
Query: 3 EERSAAYWTTLAPNVEDYSSTTARMIAAGSGHVVKGILWC----------GDVTV----- 47
+++S W AP VE+Y+ A+ IA G+G +VKGI C G T+
Sbjct: 146 KKKSDLDWEEFAPCVENYNHFLAKAIAGGTGQIVKGIFMCSNAYTNQVQKGGQTILNSPS 205
Query: 48 DRLNWGNKVMKKRLSSGSRSEISPQTL-KRIRRVKRVTRMTEKVANGLLSGVVKVSGFFT 106
D+ N GN ++K+ +++ + + + + + RV+++T MTE ++ LL+GV VSG
Sbjct: 206 DKKNGGNGMVKESMNNKTAAATKNNRMNENLIRVRKLTNMTEHLSKSLLNGVGIVSGSLM 265
Query: 107 SSLVNSKVGKKFFSLLPGEVVLASLDGFSK 136
+ ++ S+ G+ F +LPGEV+LASLD SK
Sbjct: 266 APVLKSQPGQAFLKMLPGEVLLASLDAVSK 295
>Medtr8g102510.3 | senescence/dehydration-associated-like protein |
HC | chr8:43159649-43161021 | 20130731
Length = 294
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 14/141 (9%)
Query: 10 WTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVMKKRLSSGSRSEI 69
W AP VEDY+ +++IA G+G +VKGI C + +++ G +++ + +
Sbjct: 154 WKEFAPRVEDYNHFLSKLIAGGTGQIVKGIFICSNAYTNKVQKGGEMILNSHADKKNGVV 213
Query: 70 SPQT--------------LKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVG 115
+ ++ K ++RV+++++MTEK++ LLSGV VSG LV S+ G
Sbjct: 214 AWESKSNKNVGASKKNKINKNLKRVRKLSKMTEKLSKSLLSGVGIVSGTVIGPLVKSQPG 273
Query: 116 KKFFSLLPGEVVLASLDGFSK 136
K F +LPGEV+LASLD SK
Sbjct: 274 KAFLRMLPGEVLLASLDAVSK 294