Miyakogusa Predicted Gene

Lj2g3v1671000.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1671000.1 tr|G7JXJ9|G7JXJ9_MEDTR 3-dehydroquinate synthase
OS=Medicago truncatula GN=MTR_5g022580 PE=3
SV=1,81.98,0,DHQ_synthase,NULL; DHQ_synthase,3-dehydroquinate synthase
AroB; aroB: 3-dehydroquinate synthase,3-de,CUFF.37668.1
         (455 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g022580.1 | 3-dehydroquinate synthase | HC | chr5:8903417-...   715   0.0  

>Medtr5g022580.1 | 3-dehydroquinate synthase | HC |
           chr5:8903417-8907501 | 20130731
          Length = 443

 Score =  715 bits (1845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/421 (83%), Positives = 368/421 (87%), Gaps = 7/421 (1%)

Query: 35  SFAPPHALSSHPRTHFRLNPKWGSVSTACPAVRRSMICASSSQVMDPSAPIIEPGVPAIV 94
           +F  PH+ S H    F   PK  S+ST      RS ICASSSQ+MDP +  I+PGVP IV
Sbjct: 30  NFLHPHSFSPHSTNLF---PKKISLSTPL----RSPICASSSQLMDPFSAKIQPGVPTIV 82

Query: 95  DVDLGNRSYPIYIGSGLLQKPELLQRHVHGKRVLVVTNETVAPLYLDKVIDALTKGNPNV 154
           +VDLGNRSYPIYIGSGLL KPELLQRHVHGK+VL+VTN TVAPLYLDKV+DALT GNPNV
Sbjct: 83  NVDLGNRSYPIYIGSGLLNKPELLQRHVHGKKVLIVTNTTVAPLYLDKVVDALTSGNPNV 142

Query: 155 SVESVILPDGEQYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAAAAFLRGV 214
           SVESVILPDGEQYK+MDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAAA+FLRGV
Sbjct: 143 SVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAAASFLRGV 202

Query: 215 NFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLSTLPERELASGF 274
           NFIQIPTTVMAQVDSSVGGKTGINH LGKNLIGAFYQPQCVLIDTDTL TLPERELASGF
Sbjct: 203 NFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLIDTDTLDTLPERELASGF 262

Query: 275 GEVIKYGLIRDAEFFEWQEKNMQALMARDPNALAYAIKRSCENKAEVVSLDEKESGLRAT 334
            EVIKYGLIRD EFFEWQEKNMQALMARDPNALAYAIKRSCENKAEVVSLDE+E G+RAT
Sbjct: 263 AEVIKYGLIRDTEFFEWQEKNMQALMARDPNALAYAIKRSCENKAEVVSLDEREGGVRAT 322

Query: 335 LNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMAADMSYRLGWIDDSIVRRVRDILIQAKL 394
           LNLGHTFGHAIET VGYGQWLHGEAVAAGTVMA DMSYRLGWIDDSIV+RV DIL Q KL
Sbjct: 323 LNLGHTFGHAIETSVGYGQWLHGEAVAAGTVMAVDMSYRLGWIDDSIVKRVSDILKQTKL 382

Query: 395 PIAPPETMTVDIFKNVMAVDKKVADXXXXXXXXXXXXXNCVFTGDYDRKALDDTLNAFCK 454
           PI PPE MTVD+FK+VMAVDKKVAD             NCVFTGDYDRKALDDTL AFCK
Sbjct: 383 PIVPPEMMTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLQAFCK 442

Query: 455 S 455
           S
Sbjct: 443 S 443