Miyakogusa Predicted Gene

Lj2g3v1659690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1659690.1 tr|G7JYQ8|G7JYQ8_MEDTR Aconitate hydratase
OS=Medicago truncatula GN=MTR_5g022940 PE=4
SV=1,95.34,0,ACONITASE,Aconitase/3-isopropylmalate dehydratase large
subunit, alpha/beta/alpha; ACONITASE,Aconita,CUFF.37648.1
         (322 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g022940.1 | cytoplasmic-like aconitate hydratase | HC | ch...   596   e-171
Medtr4g048190.1 | cytoplasmic-like aconitate hydratase | HC | ch...   545   e-155
Medtr2g088360.1 | cytoplasmic-like aconitate hydratase | HC | ch...   541   e-154
Medtr1g075520.1 | cytoplasmic-like aconitate hydratase | HC | ch...   488   e-138
Medtr2g067620.1 | cytoplasmic-like aconitate hydratase | HC | ch...   428   e-120
Medtr5g022940.2 | cytoplasmic-like aconitate hydratase | HC | ch...   395   e-110
Medtr5g092890.1 | hypothetical protein | LC | chr5:40558775-4055...    55   1e-07
Medtr1g045750.1 | 3-isopropylmalate dehydratase, large subunit |...    50   4e-06

>Medtr5g022940.1 | cytoplasmic-like aconitate hydratase | HC |
           chr5:9092197-9099891 | 20130731
          Length = 901

 Score =  596 bits (1537), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 292/322 (90%), Positives = 298/322 (92%)

Query: 1   MATDHPFQSILKTLEKPGGGGEFGKYYSLPALNDPRIEALPYSIRILLESAIRNCDEFQV 60
           MAT +PF +ILKTLEKPGGGGEFGKYYSLPALND RI+ALPYSIRILLESAIRNCDEFQV
Sbjct: 1   MATQNPFNNILKTLEKPGGGGEFGKYYSLPALNDSRIDALPYSIRILLESAIRNCDEFQV 60

Query: 61  KSNDVEKIIDWKNTAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGGDSNKIN 120
           KS+DVEKIIDWKNT+PKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMN LGGDSNKIN
Sbjct: 61  KSDDVEKIIDWKNTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNRLGGDSNKIN 120

Query: 121 PLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFGFLKWGSNAFNNMLVVPPGSG 180
           PLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFGFLKWGSNAFNNMLVVPPGSG
Sbjct: 121 PLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFGFLKWGSNAFNNMLVVPPGSG 180

Query: 181 IVHQVNLEYLGRVVFNTNGVLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPM 240
           IVHQVNLEYLGRVVFNTNGVLYPDSVVGTDSHTTMID                 MLGQPM
Sbjct: 181 IVHQVNLEYLGRVVFNTNGVLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPM 240

Query: 241 SMVLPGVVGFKLLGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRAT 300
           SMVLPGVVGFKLLGKLR GVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSEL LADRAT
Sbjct: 241 SMVLPGVVGFKLLGKLRSGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELPLADRAT 300

Query: 301 IANMSPEYGGTLGFFPVDHVTL 322
           IANMSPEYG T+GFFPVDHVTL
Sbjct: 301 IANMSPEYGATMGFFPVDHVTL 322


>Medtr4g048190.1 | cytoplasmic-like aconitate hydratase | HC |
           chr4:17044934-17035507 | 20130731
          Length = 979

 Score =  545 bits (1403), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 266/322 (82%), Positives = 284/322 (88%), Gaps = 1/322 (0%)

Query: 1   MATDHPFQSILKTLEKPGGGGEFGKYYSLPALNDPRIEALPYSIRILLESAIRNCDEFQV 60
           MA+++PF+  L +L KPGGG EFGK+YSLP+LNDPRI+ LPYSIRILLESAIRNCD FQV
Sbjct: 82  MASENPFKGNLTSLPKPGGG-EFGKFYSLPSLNDPRIDKLPYSIRILLESAIRNCDNFQV 140

Query: 61  KSNDVEKIIDWKNTAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGGDSNKIN 120
              DVEKIIDW+NT+ KQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMN LG DSNKIN
Sbjct: 141 TKEDVEKIIDWENTSTKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKIN 200

Query: 121 PLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFGFLKWGSNAFNNMLVVPPGSG 180
           PLVPVDLV+DHSVQVDVARSENAVQANMELEFQRNKERF FLKWGS AF NMLVVPPGSG
Sbjct: 201 PLVPVDLVVDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFRNMLVVPPGSG 260

Query: 181 IVHQVNLEYLGRVVFNTNGVLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPM 240
           IVHQVNLEYLGRVVFN  G+LYPDSVVGTDSHTTMID                 MLGQPM
Sbjct: 261 IVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPM 320

Query: 241 SMVLPGVVGFKLLGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRAT 300
           SMVLPGVVGFKL G L++GVTATDLVLTVTQ+LRKHGVVGKFVEFYG+GMS+LSLADRAT
Sbjct: 321 SMVLPGVVGFKLSGNLQNGVTATDLVLTVTQILRKHGVVGKFVEFYGDGMSKLSLADRAT 380

Query: 301 IANMSPEYGGTLGFFPVDHVTL 322
           IANMSPEYG T+GFFPVDHVTL
Sbjct: 381 IANMSPEYGATMGFFPVDHVTL 402


>Medtr2g088360.1 | cytoplasmic-like aconitate hydratase | HC |
           chr2:37230917-37240757 | 20130731
          Length = 979

 Score =  541 bits (1394), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 266/321 (82%), Positives = 281/321 (87%), Gaps = 1/321 (0%)

Query: 2   ATDHPFQSILKTLEKPGGGGEFGKYYSLPALNDPRIEALPYSIRILLESAIRNCDEFQVK 61
           A ++PF+  L +L KPGGG EFGK+YSLP+LNDPRI+ LPYSIRILLESAIRNCD FQV 
Sbjct: 83  AGENPFKGNLTSLPKPGGG-EFGKFYSLPSLNDPRIDRLPYSIRILLESAIRNCDNFQVT 141

Query: 62  SNDVEKIIDWKNTAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGGDSNKINP 121
             DVEKIIDW++T+ KQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMN LG DSNKINP
Sbjct: 142 KADVEKIIDWESTSAKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNRLGSDSNKINP 201

Query: 122 LVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFGFLKWGSNAFNNMLVVPPGSGI 181
           LVPVDLV+DHSVQVDVARSENAVQANMELEFQRNKERF FLKWGS AF NMLVVPPGSGI
Sbjct: 202 LVPVDLVVDHSVQVDVARSENAVQANMELEFQRNKERFSFLKWGSTAFRNMLVVPPGSGI 261

Query: 182 VHQVNLEYLGRVVFNTNGVLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMS 241
           VHQVNLEYLGRVVFN  G+LYPDSVVGTDSHTTMID                 MLGQPMS
Sbjct: 262 VHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 321

Query: 242 MVLPGVVGFKLLGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRATI 301
           MVLPGVVGFKL GKLR+GVTATDLVLTVTQ+LRKHGVVGKFVEFYG GM ELSLADRATI
Sbjct: 322 MVLPGVVGFKLSGKLRNGVTATDLVLTVTQILRKHGVVGKFVEFYGNGMGELSLADRATI 381

Query: 302 ANMSPEYGGTLGFFPVDHVTL 322
           ANMSPEYG T+GFFPVDHVTL
Sbjct: 382 ANMSPEYGATMGFFPVDHVTL 402


>Medtr1g075520.1 | cytoplasmic-like aconitate hydratase | HC |
           chr1:33443587-33449043 | 20130731
          Length = 895

 Score =  488 bits (1255), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 241/322 (74%), Positives = 265/322 (82%), Gaps = 7/322 (2%)

Query: 1   MATDHPFQSILKTLEKPGGGGEFGKYYSLPALNDPRIEALPYSIRILLESAIRNCDEFQV 60
           + ++H F+ IL  L KPGGG E+GK++SLP LND RIE LPYSIRIL+ESAIRNCD F+V
Sbjct: 4   LTSEHVFKGILTGLPKPGGGDEYGKFFSLPLLNDSRIERLPYSIRILVESAIRNCDNFKV 63

Query: 61  KSNDVEKIIDWKNTAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGGDSNKIN 120
             NDVE IIDW+NT+  Q EIPF PARVLLQD TGVPA+VDLA MRDAM NLGGD NKI+
Sbjct: 64  TQNDVENIIDWENTSQNQTEIPFMPARVLLQDATGVPALVDLASMRDAMKNLGGDPNKIS 123

Query: 121 PLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFGFLKWGSNAFNNMLVVPPGSG 180
           PLVPV+LVIDHSVQVDVARSENAVQAN+E EFQRNKERFGFLKWGS+AF+N LVVPPGSG
Sbjct: 124 PLVPVELVIDHSVQVDVARSENAVQANVEFEFQRNKERFGFLKWGSSAFDNTLVVPPGSG 183

Query: 181 IVHQVNLEYLGRVVFNTNGVLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPM 240
           IVHQVNLEYLGRVVFN +G+LYPDSV+GTDSHT MID                 MLGQPM
Sbjct: 184 IVHQVNLEYLGRVVFNNDGILYPDSVIGTDSHTPMIDGLGIAGWGVGGIEAEAAMLGQPM 243

Query: 241 SMVLPGVVGFKLLGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRAT 300
           SM+LPGVVGFKL+GKL DGVTATDLVLTVTQMLRKHGVV       GEG+ ELSL DRAT
Sbjct: 244 SMILPGVVGFKLIGKLLDGVTATDLVLTVTQMLRKHGVV-------GEGVGELSLPDRAT 296

Query: 301 IANMSPEYGGTLGFFPVDHVTL 322
           IANM PEYG T+ FFPVD VTL
Sbjct: 297 IANMCPEYGATMAFFPVDDVTL 318


>Medtr2g067620.1 | cytoplasmic-like aconitate hydratase | HC |
           chr2:28312952-28303191 | 20130731
          Length = 865

 Score =  428 bits (1100), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/271 (80%), Positives = 226/271 (83%), Gaps = 4/271 (1%)

Query: 56  DEFQVKSNDVEKIIDWKNTAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGGD 115
           D F    NDVEKIIDW+ T+ KQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMN LG D
Sbjct: 134 DIFWAHPNDVEKIIDWEITSAKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNRLGSD 193

Query: 116 SNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFGFLKWGSNAFNNMLVV 175
           SNKINPLV VDLV+DHSVQVDVARSENAVQANMELEFQRNKERF FLKWGS AF NMLVV
Sbjct: 194 SNKINPLVLVDLVVDHSVQVDVARSENAVQANMELEFQRNKERFSFLKWGSTAFRNMLVV 253

Query: 176 PPGSGIVHQVNLEYLGRVVFNTNGVLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXM 235
           PPGSGIVHQVNLEYLGRVVFN  G+LYPDSVVGTDSHTTMID                 M
Sbjct: 254 PPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEASM 313

Query: 236 LGQPMSMVLPGVVGFKLLGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYG-EGMSELS 294
           LGQPMSMVLPGVVGFKL GKLR+GVTATDLVLTVTQ+LRKHGVVGKFVEFYG + +    
Sbjct: 314 LGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLTVTQILRKHGVVGKFVEFYGNQDLLHFL 373

Query: 295 LA---DRATIANMSPEYGGTLGFFPVDHVTL 322
           L     RATIANMSPEYG T+GFFPVDHVTL
Sbjct: 374 LIIRLCRATIANMSPEYGATMGFFPVDHVTL 404


>Medtr5g022940.2 | cytoplasmic-like aconitate hydratase | HC |
           chr5:9092237-9099824 | 20130731
          Length = 797

 Score =  395 bits (1015), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/218 (89%), Positives = 197/218 (90%)

Query: 105 MRDAMNNLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFGFLKW 164
           MRDAMN LGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFGFLKW
Sbjct: 1   MRDAMNRLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFGFLKW 60

Query: 165 GSNAFNNMLVVPPGSGIVHQVNLEYLGRVVFNTNGVLYPDSVVGTDSHTTMIDXXXXXXX 224
           GSNAFNNMLVVPPGSGIVHQVNLEYLGRVVFNTNGVLYPDSVVGTDSHTTMID       
Sbjct: 61  GSNAFNNMLVVPPGSGIVHQVNLEYLGRVVFNTNGVLYPDSVVGTDSHTTMIDGLGVAGW 120

Query: 225 XXXXXXXXXXMLGQPMSMVLPGVVGFKLLGKLRDGVTATDLVLTVTQMLRKHGVVGKFVE 284
                     MLGQPMSMVLPGVVGFKLLGKLR GVTATDLVLTVTQMLRKHGVVGKFVE
Sbjct: 121 GVGGIEAEAAMLGQPMSMVLPGVVGFKLLGKLRSGVTATDLVLTVTQMLRKHGVVGKFVE 180

Query: 285 FYGEGMSELSLADRATIANMSPEYGGTLGFFPVDHVTL 322
           FYGEGMSEL LADRATIANMSPEYG T+GFFPVDHVTL
Sbjct: 181 FYGEGMSELPLADRATIANMSPEYGATMGFFPVDHVTL 218


>Medtr5g092890.1 | hypothetical protein | LC |
           chr5:40558775-40558123 | 20130731
          Length = 127

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/53 (56%), Positives = 34/53 (64%), Gaps = 10/53 (18%)

Query: 240 MSMVLPGV----VGFKLLGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGE 288
           MSM+LPG     VG KL GK       TD VLT+TQMLR H V+ KF+EFYG 
Sbjct: 60  MSMILPGTGTGGVGNKLFGKF------TDSVLTLTQMLRNHRVISKFIEFYGR 106


>Medtr1g045750.1 | 3-isopropylmalate dehydratase, large subunit | HC
           | chr1:17203739-17212564 | 20130731
          Length = 505

 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 3/141 (2%)

Query: 184 QVNLEYLG--RVVFNTNGVLYPDSVV-GTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPM 240
           +VN +Y G   +     G   P  V+ GTDSHT                     +    +
Sbjct: 166 KVNPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGAGKL 225

Query: 241 SMVLPGVVGFKLLGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRAT 300
            + +P  + F + G++ + + A DL+L +   +   G   K +EF G  +  L++ +R T
Sbjct: 226 LLKVPPTLRFVMDGEMPNYLLAKDLILQIIGEISVAGATYKSMEFVGSTVESLNMEERMT 285

Query: 301 IANMSPEYGGTLGFFPVDHVT 321
           + NM  E GG  G  P D +T
Sbjct: 286 LCNMVVEAGGKNGVIPPDSIT 306