Miyakogusa Predicted Gene

Lj2g3v1648050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1648050.1 NODE_51673_length_735_cov_152.812241.path1.1
         (133 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g022990.1 | methionine-S-oxide reductase | HC | chr5:91185...   218   1e-57
Medtr3g088030.1 | hypothetical protein | HC | chr3:39908391-3990...    51   3e-07

>Medtr5g022990.1 | methionine-S-oxide reductase | HC |
           chr5:9118551-9117693 | 20130731
          Length = 126

 Score =  218 bits (555), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 97/125 (77%), Positives = 113/125 (90%)

Query: 5   SSIYCCTECGTDLNLNPAYAFPPDFYFEAGNKHSVSFSAVDSTKFTFEKEDKIRPFFETL 64
           +SIY C+EC T+LNLN +Y +PPDFYFEAGNK+S+SFS +D+TKF FEKEDKIRPFFET+
Sbjct: 2   ASIYTCSECNTNLNLNTSYTYPPDFYFEAGNKNSISFSTIDATKFKFEKEDKIRPFFETI 61

Query: 65  NYWGIQRKRTKIKCCNCRRLVGHIYDDGPPLTDSPGQFHMGPSQVIPRNPRYRFKTKALR 124
           NYWGIQRKRTKIKC NC  LVG++YDDGPPL ++PGQFHMGPSQVIPR PRYRFK+K+LR
Sbjct: 62  NYWGIQRKRTKIKCNNCNHLVGYVYDDGPPLINTPGQFHMGPSQVIPRAPRYRFKSKSLR 121

Query: 125 ITSPT 129
           ITS T
Sbjct: 122 ITSQT 126


>Medtr3g088030.1 | hypothetical protein | HC |
           chr3:39908391-39906229 | 20130731
          Length = 176

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 11/129 (8%)

Query: 8   YCCTECGTDLNLNPAYAFPPDF---YFEAGNKHSVSFSAVDSTKFTFEKEDKIRPFFETL 64
           Y C  CG DLNL+ +          Y ++  +  +SF  +D ++FT   E +  P F   
Sbjct: 38  YSCGSCGYDLNLSSSNRNTSSIDSKYGKSIKRGIISFFNIDDSRFTQVDEIECAPHFSK- 96

Query: 65  NYWGIQRKRTKIKCCNCRRLVGHIYDDGPP------LTDSPGQFHMGPSQVIPRNPRYRF 118
           N WG+ R++TK+ C  C   +G+ Y+          L  S G     PS   P + +Y  
Sbjct: 97  NLWGLFRRKTKLLCRKCCNHIGYAYNGNNSSSPSFILVSSNGA-EPSPSTEAPTHVKYNI 155

Query: 119 KTKALRITS 127
           + +AL+ +S
Sbjct: 156 RIRALQPSS 164