Miyakogusa Predicted Gene

Lj2g3v1647850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1647850.1 tr|A9RQ75|A9RQ75_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_117579,31.68,1e-18,DNase-RNase,Bifunctional nuclease;
seg,NULL; Hypothetical protein TM0160,Bifunctional
nuclease,NODE_62094_length_1332_cov_62.785286.path1.1
         (323 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g023110.2 | wound-responsive family protein | HC | chr5:91...   424   e-119
Medtr5g023110.3 | wound-responsive family protein | HC | chr5:91...   424   e-119
Medtr5g023110.1 | wound-responsive family protein | HC | chr5:91...   424   e-119
Medtr3g112160.1 | wound-responsive family protein | HC | chr3:52...   121   1e-27
Medtr1g022485.1 | nuclease in basal defense response protein | H...   108   8e-24
Medtr3g112160.2 | wound-responsive family protein | HC | chr3:52...    79   6e-15

>Medtr5g023110.2 | wound-responsive family protein | HC |
           chr5:9180372-9183953 | 20130731
          Length = 326

 Score =  424 bits (1091), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/309 (72%), Positives = 247/309 (79%), Gaps = 10/309 (3%)

Query: 16  DHTNAASTTRSFPHSLAVDFSSHPFPL-IRTRRFRCPKSILIXXXXXXXXXXXFPDHHNN 74
           DHTNAA T+RS PHSL+  FS    PL  R  RF  P+S LI           F DHHNN
Sbjct: 21  DHTNAA-TSRSVPHSLSFHFSPINLPLRSRHSRFHKPRSFLISCNSSLSRSN-FSDHHNN 78

Query: 75  D---DFLEASLLLSETISHYHMWRQRFQPELQRKSRRPSIPLSVQEKTSRSYNNLSRQGF 131
           +   DFLEAS+LLSETI+HY MWR RFQ ELQRKS  P +P    E +SR  +NL RQGF
Sbjct: 79  NNENDFLEASILLSETIAHYGMWRHRFQSELQRKS--PVLPFP--ENSSRRDSNLFRQGF 134

Query: 132 LQRFQNPTIFLKVSCDGDYILPIVLGKIAIEKLIGAEVEQESEDCPDQFQFVKDLVDRLD 191
           LQRFQNPTIFLK+SCDGDY+LPIV+GKIAIEKLI AEVEQE ED PDQFQFV +LV+RLD
Sbjct: 135 LQRFQNPTIFLKISCDGDYVLPIVVGKIAIEKLIDAEVEQEIEDWPDQFQFVNNLVERLD 194

Query: 192 HEVIMVRITERVVSTYFAKLYISQPGESGIISLDARPSDAINVANRCKAPIYVSKQIVFT 251
           HEVIMVRITERVVSTYFA+LY+SQPG+S IIS+D RPSDAINVAN+CKAPIYVSK+IVFT
Sbjct: 195 HEVIMVRITERVVSTYFARLYLSQPGKSDIISVDLRPSDAINVANKCKAPIYVSKEIVFT 254

Query: 252 DAIRLGYGMGGVLKKKATYDVLLDSPLDGPDVVAQELSMMRSMHTAIKMERFKDAAIWRD 311
           DAIRLGYGMG V  KKA YDVLLDS +DGPD VAQELSMM +MH AIK ERF DAA WR+
Sbjct: 255 DAIRLGYGMGRVHNKKAIYDVLLDSAIDGPDSVAQELSMMHNMHLAIKQERFNDAATWRN 314

Query: 312 KLANLRKSS 320
           KL NLRKSS
Sbjct: 315 KLENLRKSS 323


>Medtr5g023110.3 | wound-responsive family protein | HC |
           chr5:9180345-9183958 | 20130731
          Length = 326

 Score =  424 bits (1091), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/309 (72%), Positives = 247/309 (79%), Gaps = 10/309 (3%)

Query: 16  DHTNAASTTRSFPHSLAVDFSSHPFPL-IRTRRFRCPKSILIXXXXXXXXXXXFPDHHNN 74
           DHTNAA T+RS PHSL+  FS    PL  R  RF  P+S LI           F DHHNN
Sbjct: 21  DHTNAA-TSRSVPHSLSFHFSPINLPLRSRHSRFHKPRSFLISCNSSLSRSN-FSDHHNN 78

Query: 75  D---DFLEASLLLSETISHYHMWRQRFQPELQRKSRRPSIPLSVQEKTSRSYNNLSRQGF 131
           +   DFLEAS+LLSETI+HY MWR RFQ ELQRKS  P +P    E +SR  +NL RQGF
Sbjct: 79  NNENDFLEASILLSETIAHYGMWRHRFQSELQRKS--PVLPFP--ENSSRRDSNLFRQGF 134

Query: 132 LQRFQNPTIFLKVSCDGDYILPIVLGKIAIEKLIGAEVEQESEDCPDQFQFVKDLVDRLD 191
           LQRFQNPTIFLK+SCDGDY+LPIV+GKIAIEKLI AEVEQE ED PDQFQFV +LV+RLD
Sbjct: 135 LQRFQNPTIFLKISCDGDYVLPIVVGKIAIEKLIDAEVEQEIEDWPDQFQFVNNLVERLD 194

Query: 192 HEVIMVRITERVVSTYFAKLYISQPGESGIISLDARPSDAINVANRCKAPIYVSKQIVFT 251
           HEVIMVRITERVVSTYFA+LY+SQPG+S IIS+D RPSDAINVAN+CKAPIYVSK+IVFT
Sbjct: 195 HEVIMVRITERVVSTYFARLYLSQPGKSDIISVDLRPSDAINVANKCKAPIYVSKEIVFT 254

Query: 252 DAIRLGYGMGGVLKKKATYDVLLDSPLDGPDVVAQELSMMRSMHTAIKMERFKDAAIWRD 311
           DAIRLGYGMG V  KKA YDVLLDS +DGPD VAQELSMM +MH AIK ERF DAA WR+
Sbjct: 255 DAIRLGYGMGRVHNKKAIYDVLLDSAIDGPDSVAQELSMMHNMHLAIKQERFNDAATWRN 314

Query: 312 KLANLRKSS 320
           KL NLRKSS
Sbjct: 315 KLENLRKSS 323


>Medtr5g023110.1 | wound-responsive family protein | HC |
           chr5:9180345-9184014 | 20130731
          Length = 326

 Score =  424 bits (1091), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/309 (72%), Positives = 247/309 (79%), Gaps = 10/309 (3%)

Query: 16  DHTNAASTTRSFPHSLAVDFSSHPFPL-IRTRRFRCPKSILIXXXXXXXXXXXFPDHHNN 74
           DHTNAA T+RS PHSL+  FS    PL  R  RF  P+S LI           F DHHNN
Sbjct: 21  DHTNAA-TSRSVPHSLSFHFSPINLPLRSRHSRFHKPRSFLISCNSSLSRSN-FSDHHNN 78

Query: 75  D---DFLEASLLLSETISHYHMWRQRFQPELQRKSRRPSIPLSVQEKTSRSYNNLSRQGF 131
           +   DFLEAS+LLSETI+HY MWR RFQ ELQRKS  P +P    E +SR  +NL RQGF
Sbjct: 79  NNENDFLEASILLSETIAHYGMWRHRFQSELQRKS--PVLPFP--ENSSRRDSNLFRQGF 134

Query: 132 LQRFQNPTIFLKVSCDGDYILPIVLGKIAIEKLIGAEVEQESEDCPDQFQFVKDLVDRLD 191
           LQRFQNPTIFLK+SCDGDY+LPIV+GKIAIEKLI AEVEQE ED PDQFQFV +LV+RLD
Sbjct: 135 LQRFQNPTIFLKISCDGDYVLPIVVGKIAIEKLIDAEVEQEIEDWPDQFQFVNNLVERLD 194

Query: 192 HEVIMVRITERVVSTYFAKLYISQPGESGIISLDARPSDAINVANRCKAPIYVSKQIVFT 251
           HEVIMVRITERVVSTYFA+LY+SQPG+S IIS+D RPSDAINVAN+CKAPIYVSK+IVFT
Sbjct: 195 HEVIMVRITERVVSTYFARLYLSQPGKSDIISVDLRPSDAINVANKCKAPIYVSKEIVFT 254

Query: 252 DAIRLGYGMGGVLKKKATYDVLLDSPLDGPDVVAQELSMMRSMHTAIKMERFKDAAIWRD 311
           DAIRLGYGMG V  KKA YDVLLDS +DGPD VAQELSMM +MH AIK ERF DAA WR+
Sbjct: 255 DAIRLGYGMGRVHNKKAIYDVLLDSAIDGPDSVAQELSMMHNMHLAIKQERFNDAATWRN 314

Query: 312 KLANLRKSS 320
           KL NLRKSS
Sbjct: 315 KLENLRKSS 323


>Medtr3g112160.1 | wound-responsive family protein | HC |
           chr3:52496109-52492599 | 20130731
          Length = 325

 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 117/203 (57%), Gaps = 8/203 (3%)

Query: 121 RSYNNLSRQGFLQRFQ-NPTIFLKVSCDGDYILPIVLGKIAIEKLIGAEVEQESEDCPDQ 179
           R  +N    G L  +  +P I LK+      +LPI++ ++    L+ A V       P  
Sbjct: 113 RCVHNSPHGGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMP-SVLLMAAVRNVQIARPTL 171

Query: 180 FQFVKDLVDRLDHEVIMVRITERVVSTYFAKLYISQPG-ESGIISLDARPSDAINVANRC 238
           +Q VK+++D++ +EV  VR+T+RV   YFA++Y+S+ G ES  +S D RPSDAIN+A RC
Sbjct: 172 YQVVKEMIDKMGYEVRAVRVTKRVQEAYFAQIYLSKVGNESECMSFDLRPSDAINIAVRC 231

Query: 239 KAPIYVSKQIVFTDAIRLGYGMGGVLKKKATYD----VLLDSPLDGPDVVAQELSMMRSM 294
           K PI V+K + ++D +R+    G +  +    D      LD P   P V  +E +++ +M
Sbjct: 232 KVPIQVNKYLAYSDGMRV-IESGKLSTQSPGSDGPLFTELDRPNGKPCVETKEFNLLHNM 290

Query: 295 HTAIKMERFKDAAIWRDKLANLR 317
            TA+  ER++DAA+WRD+L   R
Sbjct: 291 LTAVVEERYQDAALWRDQLNQFR 313


>Medtr1g022485.1 | nuclease in basal defense response protein | HC |
           chr1:7218807-7215469 | 20130731
          Length = 359

 Score =  108 bits (269), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 117/207 (56%), Gaps = 8/207 (3%)

Query: 121 RSYNNLSRQGFLQRFQ-NPTIFLKVSCDGDYILPIVLGKIAIEKLIGAEVEQESEDCPDQ 179
           R  +N  + G L  +  +P + LK+    D +LPI++ ++    L+ A V   S   P  
Sbjct: 150 RCVHNNPQGGHLPDYSPHPAMVLKMEDGSDLLLPIIVLEMPSVLLLAA-VRNVSIARPTL 208

Query: 180 FQFVKDLVDRLDHEVIMVRITERVVSTYFAKLYISQPG-ESGIISLDARPSDAINVANRC 238
           ++ V +++ ++ ++V +VR+T RV   YFA+LY+++ G E+   S D RPSDAIN+A RC
Sbjct: 209 YEVVMEMIGKMGYQVKLVRVTRRVDEAYFAQLYLTKVGNEAECRSFDLRPSDAINIAVRC 268

Query: 239 KAPIYVSKQIVFTDAIRLGYGMGGVLKKKATYDVLLDSPLDGPD----VVAQELSMMRSM 294
           K PI V+K +  +D +R+    G +  +  ++D  L + +D P+        E +++ +M
Sbjct: 269 KVPIQVNKYLASSDGMRV-IESGKLPTQIPSFDGRLFTEMDKPNGQPCAETDEFNLLNNM 327

Query: 295 HTAIKMERFKDAAIWRDKLANLRKSSH 321
             A+  ER+ DAA+WRD+L   R   +
Sbjct: 328 LKAVDEERYDDAALWRDRLNQHRAGKN 354


>Medtr3g112160.2 | wound-responsive family protein | HC |
           chr3:52496109-52492711 | 20130731
          Length = 235

 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 3/121 (2%)

Query: 121 RSYNNLSRQGFLQRFQ-NPTIFLKVSCDGDYILPIVLGKIAIEKLIGAEVEQESEDCPDQ 179
           R  +N    G L  +  +P I LK+      +LPI++ ++    L+ A V       P  
Sbjct: 113 RCVHNSPHGGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMP-SVLLMAAVRNVQIARPTL 171

Query: 180 FQFVKDLVDRLDHEVIMVRITERVVSTYFAKLYISQPG-ESGIISLDARPSDAINVANRC 238
           +Q VK+++D++ +EV  VR+T+RV   YFA++Y+S+ G ES  +S D RPSDAIN+A RC
Sbjct: 172 YQVVKEMIDKMGYEVRAVRVTKRVQEAYFAQIYLSKVGNESECMSFDLRPSDAINIAVRC 231

Query: 239 K 239
           K
Sbjct: 232 K 232