Miyakogusa Predicted Gene

Lj2g3v1643300.1
Show Alignment: 
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1643300.1 Non Characterized Hit- tr|K4BI80|K4BI80_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,32.58,1e-18,RWP-RK,Plant regulator RWP-RK; coiled-coil,NULL;
seg,NULL; RWP_RK,Plant regulator
RWP-RK,NODE_66296_length_1203_cov_10.309227.path2.1
         (325 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g024070.1 | plant regulator RWP-RK family protein | HC | c...   416   e-116
Medtr3g091700.1 | RWP-RK domain protein | LC | chr3:41746533-417...    99   7e-21
Medtr1g069025.1 | RWP-RK domain protein | LC | chr1:29589381-295...    94   1e-19
Medtr3g435550.1 | RWP-RK domain protein | HC | chr3:11674227-116...    92   5e-19
Medtr3g104830.1 | RWP-RK domain protein | LC | chr3:48320651-483...    69   7e-12
Medtr0140s0010.1 | RWP-RK domain protein | LC | scaffold0140:220...    64   2e-10
Medtr3g465110.1 | RWP-RK domain protein | LC | chr3:26325181-263...    57   3e-08
Medtr4g068000.3 | plant regulator RWP-RK family protein | HC | c...    56   5e-08
Medtr4g068000.2 | plant regulator RWP-RK family protein | HC | c...    56   5e-08
Medtr4g068000.1 | plant regulator RWP-RK family protein | HC | c...    56   5e-08
Medtr3g115400.1 | plant regulator RWP-RK family protein | HC | c...    51   2e-06
Medtr3g115400.2 | plant regulator RWP-RK family protein | HC | c...    51   2e-06

>Medtr5g024070.1 | plant regulator RWP-RK family protein | HC |
           chr5:9635742-9632168 | 20130731
          Length = 330

 Score =  416 bits (1069), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 212/309 (68%), Positives = 242/309 (78%), Gaps = 8/309 (2%)

Query: 16  IQPELMRSVHVYRQCGDDGXXXXXXXXXFLFSKYSYYVEMQASPILQLQKSCV-SGIREG 74
           IQPELMRSVHVYR+C D G         F+FS+   YVEM+A+PIL+L KS V   I EG
Sbjct: 15  IQPELMRSVHVYREC-DGGEKEVERE--FVFSENGSYVEMKATPILRLLKSFVCEEIFEG 71

Query: 75  YRNGVWDCIFAFHAGHSPQFSRIPPLLLVTRNPKLHCIPNLLNDLHIIYKLDVKEEDIDV 134
           Y+NGVW C+FAFHA + PQFS IP  LLVTRNPKL  IPNLLNDLH+IYKL+ K+E    
Sbjct: 72  YKNGVWLCVFAFHAYNVPQFSHIPTFLLVTRNPKLQAIPNLLNDLHMIYKLEPKKEQKST 131

Query: 135 TQ----EESLGNNNDCLPSEIALPKRDLDLNCLPYEEDESELQDNEIEVESLTGLVGKKK 190
            +    EE  GNNND  P +  LP  + DLNCLPYEEDE+EL D+E +  S  G +GKKK
Sbjct: 132 PESSASEELKGNNNDFQPPKKVLPVLNQDLNCLPYEEDEAELLDDETDFGSSAGFLGKKK 191

Query: 191 RAPSNHIANIAYSDLVKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSL 250
           RA S+H+A I  SDL KYFDMPI EAS  LNVGLTVLK+KCREFGIPRWPHRKIKSLDSL
Sbjct: 192 RAASDHVAKITLSDLAKYFDMPIAEASNNLNVGLTVLKRKCREFGIPRWPHRKIKSLDSL 251

Query: 251 IHDLQEMAKHQELEDKAAAMAVMKRQKMLESEKENIEKQPFIEIQSETKKFRQDIFKRRY 310
           IHDLQE AKHQE+EDK AAMAV++RQKMLESEKENIEK+PF++IQ ETK+FRQDIFKRR+
Sbjct: 252 IHDLQEEAKHQEMEDKDAAMAVIRRQKMLESEKENIEKRPFMDIQIETKRFRQDIFKRRH 311

Query: 311 RARAIEKQN 319
           RAR IEKQN
Sbjct: 312 RARVIEKQN 320


>Medtr3g091700.1 | RWP-RK domain protein | LC |
           chr3:41746533-41744642 | 20130731
          Length = 261

 Score = 98.6 bits (244), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 86/148 (58%), Gaps = 18/148 (12%)

Query: 173 QDNEIEVESLTGLVGKKKRAPSNHI-----ANIAYSDLVKYFDMPIVEASRRLNVGLTVL 227
           ++NE E + L+ LV    ++ S  I     +++ + D+ K+FD+PI  A+++LNVG+T L
Sbjct: 122 KENEWENQELSSLVPLALQSSSTSIIRKRSSSLQFDDIKKHFDVPITMAAKKLNVGVTFL 181

Query: 228 KKKCREFGIPRWPHRKIKSLDSLIHDLQEMAKHQELEDKAAAMAVMKRQKMLESEKENIE 287
           KK+CRE  I RWPHRK++SL  LI +L++               + K   MLE +K+ +E
Sbjct: 182 KKRCRELNITRWPHRKLRSLMLLIDNLKD-------------KGLTKEVAMLEKQKKMLE 228

Query: 288 KQPFIEIQSETKKFRQDIFKRRYRARAI 315
           K P + +  E KK RQ  FK  Y+ R +
Sbjct: 229 KLPGMHLNDEIKKLRQACFKANYKNRKL 256


>Medtr1g069025.1 | RWP-RK domain protein | LC |
           chr1:29589381-29590085 | 20130731
          Length = 234

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 88/153 (57%), Gaps = 26/153 (16%)

Query: 169 ESELQDNEIEV------ESLTGLVGKKKRAPSNHIANIAYSDLVKYFDMPIVEASRRLNV 222
           E+E ++ E+ +       S TG++  +KR+ S     + Y D+ K+FD+PI  A+ ++NV
Sbjct: 97  ENEWENQELSLVPLALPSSSTGII--RKRSSS-----LQYDDIKKHFDVPITMAAEKMNV 149

Query: 223 GLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEMAKHQELEDKAAAMAVMKRQKMLESE 282
           G+T+LKK+CRE  I RW HRK++SL  LI +L+E    +E+              MLE  
Sbjct: 150 GVTLLKKRCRELNITRWSHRKLRSLMLLIENLKEKGLTEEI-------------AMLEKP 196

Query: 283 KENIEKQPFIEIQSETKKFRQDIFKRRYRARAI 315
           K+ +EK P +++  E KK RQ  FK  Y+ R +
Sbjct: 197 KKMLEKLPGMDLNDEIKKLRQACFKANYKNRKL 229


>Medtr3g435550.1 | RWP-RK domain protein | HC |
           chr3:11674227-11672839 | 20130731
          Length = 192

 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 82/137 (59%), Gaps = 8/137 (5%)

Query: 180 ESLTGLVGKKKRAPSNHIANIAYSDLV-KYFDMPIVEASRRLNVGLTVLKKKCREFGIPR 238
           E++   + K KR    + A +   + + +YF MPI +A+R LNVGLT LKK+CR+ GI R
Sbjct: 38  ENVAKEIVKGKRCREENSARMLTKETISEYFYMPISQAARELNVGLTHLKKRCRDLGIQR 97

Query: 239 WPHRKIKSLDSLIHDLQEMAKHQELEDKAAAMAVMKRQKMLESEKENIEKQPFIEIQSET 298
           WPHRK+ SL +LI ++QE     + + + A        ++L+ E + +E++P +++   T
Sbjct: 98  WPHRKLMSLQTLIKNVQEQGNEYDEKIRNAV-------EVLQKEMKKVEEKPDLQLAENT 150

Query: 299 KKFRQDIFKRRYRARAI 315
           K+ RQ  FK  Y+ R +
Sbjct: 151 KRLRQACFKANYKKRRL 167


>Medtr3g104830.1 | RWP-RK domain protein | LC |
           chr3:48320651-48318576 | 20130731
          Length = 498

 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 68/119 (57%), Gaps = 14/119 (11%)

Query: 166 EEDESELQDNEIEVESLTGLVGKKKRAPSNHIANIAYSDLVKYFDMPIVEASRRLNVGL- 224
           E+++ ++ DN     +L  L  ++K++     A +  SDL  YF +PI EA+    V L 
Sbjct: 370 EQEQEQMGDNG----TLRNLSEQRKKS-----AKLKLSDLCDYFHLPIDEAADHEKVKLC 420

Query: 225 -TVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEMAKHQELEDKAAAMAVMKRQKMLESE 282
            TVLKK CR+ G+PRWPHRK+K   SL+  ++ +AK  E +D  A     +  K L++E
Sbjct: 421 PTVLKKTCRKAGLPRWPHRKVK---SLLKQIKLLAKQWEGQDPEARARTEREIKSLQTE 476


>Medtr0140s0010.1 | RWP-RK domain protein | LC |
           scaffold0140:2206-3249 | 20130731
          Length = 238

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 4/74 (5%)

Query: 230 KCREFGIPRWPHRKIKSLDSLIHDLQEMAKHQELEDKAAAMAVMKRQKMLESEKENIEKQ 289
           KCRE GI RWPHRK+ SL +LI+++QE+ K   L      M + K    LE E + +E+ 
Sbjct: 150 KCRELGIRRWPHRKLMSLQTLINNIQELGKEDGLRSDEKFMDIEK----LEEEMKLVEEM 205

Query: 290 PFIEIQSETKKFRQ 303
           P +++Q  TK+ RQ
Sbjct: 206 PDMQLQDHTKRLRQ 219


>Medtr3g465110.1 | RWP-RK domain protein | LC |
           chr3:26325181-26327770 | 20130731
          Length = 550

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 6/96 (6%)

Query: 167 EDESELQDNEIEVESLTGLVGKKKRAPSNHIANIAYSDLVKYFDMPIVEASRRLNVGLTV 226
           E E E Q  EIE      L  ++KR      A    +D V YF +P+ EA+ R+N+  + 
Sbjct: 414 EQEQE-QVGEIETPEKRNLSEQRKRC-----AQFTLADFVDYFHLPMEEAAARMNIAAST 467

Query: 227 LKKKCREFGIPRWPHRKIKSLDSLIHDLQEMAKHQE 262
           LKK  R   + RWPHRK+K L   I  LQ     Q+
Sbjct: 468 LKKISRRTKLRRWPHRKVKCLLRQIAILQNQLDRQD 503


>Medtr4g068000.3 | plant regulator RWP-RK family protein | HC |
           chr4:25526985-25532764 | 20130731
          Length = 912

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 5/112 (4%)

Query: 149 SEIALPKRDLDLNCLPYEEDESELQDNEIEVESLTGLVGKKKRAPSNHIA---NIAYSDL 205
           S+IA    D DL  + + E   +   N+      T   G +K+A     A   N++ S L
Sbjct: 531 SQIAFSSGDNDLFQMSFNETNLKNSGNQAAYSQATS--GSRKQAEKKRSAVEKNVSLSVL 588

Query: 206 VKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEM 257
            +YF   + +A++++ V  T LK+ CR+ GI RWP RKI  ++  +  +Q +
Sbjct: 589 QQYFSGSLKDAAKKIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTV 640


>Medtr4g068000.2 | plant regulator RWP-RK family protein | HC |
           chr4:25527942-25532685 | 20130731
          Length = 912

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 5/112 (4%)

Query: 149 SEIALPKRDLDLNCLPYEEDESELQDNEIEVESLTGLVGKKKRAPSNHIA---NIAYSDL 205
           S+IA    D DL  + + E   +   N+      T   G +K+A     A   N++ S L
Sbjct: 531 SQIAFSSGDNDLFQMSFNETNLKNSGNQAAYSQATS--GSRKQAEKKRSAVEKNVSLSVL 588

Query: 206 VKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEM 257
            +YF   + +A++++ V  T LK+ CR+ GI RWP RKI  ++  +  +Q +
Sbjct: 589 QQYFSGSLKDAAKKIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTV 640


>Medtr4g068000.1 | plant regulator RWP-RK family protein | HC |
           chr4:25526985-25532764 | 20130731
          Length = 912

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 5/112 (4%)

Query: 149 SEIALPKRDLDLNCLPYEEDESELQDNEIEVESLTGLVGKKKRAPSNHIA---NIAYSDL 205
           S+IA    D DL  + + E   +   N+      T   G +K+A     A   N++ S L
Sbjct: 531 SQIAFSSGDNDLFQMSFNETNLKNSGNQAAYSQATS--GSRKQAEKKRSAVEKNVSLSVL 588

Query: 206 VKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEM 257
            +YF   + +A++++ V  T LK+ CR+ GI RWP RKI  ++  +  +Q +
Sbjct: 589 QQYFSGSLKDAAKKIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTV 640


>Medtr3g115400.1 | plant regulator RWP-RK family protein | HC |
           chr3:53964310-53969452 | 20130731
          Length = 909

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 186 VGKKKRAPSNHIANIAYSDLVKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIK 245
            G+K+RA +     I    L +YF   + +A++ + V  T LK+ CR+ GI RWP RKIK
Sbjct: 582 TGEKRRAKAEK--TITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIK 639

Query: 246 SLDSLIHDLQ 255
            +   +  LQ
Sbjct: 640 KVGHSLQKLQ 649


>Medtr3g115400.2 | plant regulator RWP-RK family protein | HC |
           chr3:53964003-53969505 | 20130731
          Length = 909

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 186 VGKKKRAPSNHIANIAYSDLVKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIK 245
            G+K+RA +     I    L +YF   + +A++ + V  T LK+ CR+ GI RWP RKIK
Sbjct: 582 TGEKRRAKAEK--TITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIK 639

Query: 246 SLDSLIHDLQ 255
            +   +  LQ
Sbjct: 640 KVGHSLQKLQ 649