Miyakogusa Predicted Gene
- Lj2g3v1643300.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1643300.1 Non Characterized Hit- tr|K4BI80|K4BI80_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,32.58,1e-18,RWP-RK,Plant regulator RWP-RK; coiled-coil,NULL;
seg,NULL; RWP_RK,Plant regulator
RWP-RK,NODE_66296_length_1203_cov_10.309227.path2.1
(325 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g024070.1 | plant regulator RWP-RK family protein | HC | c... 416 e-116
Medtr3g091700.1 | RWP-RK domain protein | LC | chr3:41746533-417... 99 7e-21
Medtr1g069025.1 | RWP-RK domain protein | LC | chr1:29589381-295... 94 1e-19
Medtr3g435550.1 | RWP-RK domain protein | HC | chr3:11674227-116... 92 5e-19
Medtr3g104830.1 | RWP-RK domain protein | LC | chr3:48320651-483... 69 7e-12
Medtr0140s0010.1 | RWP-RK domain protein | LC | scaffold0140:220... 64 2e-10
Medtr3g465110.1 | RWP-RK domain protein | LC | chr3:26325181-263... 57 3e-08
Medtr4g068000.3 | plant regulator RWP-RK family protein | HC | c... 56 5e-08
Medtr4g068000.2 | plant regulator RWP-RK family protein | HC | c... 56 5e-08
Medtr4g068000.1 | plant regulator RWP-RK family protein | HC | c... 56 5e-08
Medtr3g115400.1 | plant regulator RWP-RK family protein | HC | c... 51 2e-06
Medtr3g115400.2 | plant regulator RWP-RK family protein | HC | c... 51 2e-06
>Medtr5g024070.1 | plant regulator RWP-RK family protein | HC |
chr5:9635742-9632168 | 20130731
Length = 330
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/309 (68%), Positives = 242/309 (78%), Gaps = 8/309 (2%)
Query: 16 IQPELMRSVHVYRQCGDDGXXXXXXXXXFLFSKYSYYVEMQASPILQLQKSCV-SGIREG 74
IQPELMRSVHVYR+C D G F+FS+ YVEM+A+PIL+L KS V I EG
Sbjct: 15 IQPELMRSVHVYREC-DGGEKEVERE--FVFSENGSYVEMKATPILRLLKSFVCEEIFEG 71
Query: 75 YRNGVWDCIFAFHAGHSPQFSRIPPLLLVTRNPKLHCIPNLLNDLHIIYKLDVKEEDIDV 134
Y+NGVW C+FAFHA + PQFS IP LLVTRNPKL IPNLLNDLH+IYKL+ K+E
Sbjct: 72 YKNGVWLCVFAFHAYNVPQFSHIPTFLLVTRNPKLQAIPNLLNDLHMIYKLEPKKEQKST 131
Query: 135 TQ----EESLGNNNDCLPSEIALPKRDLDLNCLPYEEDESELQDNEIEVESLTGLVGKKK 190
+ EE GNNND P + LP + DLNCLPYEEDE+EL D+E + S G +GKKK
Sbjct: 132 PESSASEELKGNNNDFQPPKKVLPVLNQDLNCLPYEEDEAELLDDETDFGSSAGFLGKKK 191
Query: 191 RAPSNHIANIAYSDLVKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSL 250
RA S+H+A I SDL KYFDMPI EAS LNVGLTVLK+KCREFGIPRWPHRKIKSLDSL
Sbjct: 192 RAASDHVAKITLSDLAKYFDMPIAEASNNLNVGLTVLKRKCREFGIPRWPHRKIKSLDSL 251
Query: 251 IHDLQEMAKHQELEDKAAAMAVMKRQKMLESEKENIEKQPFIEIQSETKKFRQDIFKRRY 310
IHDLQE AKHQE+EDK AAMAV++RQKMLESEKENIEK+PF++IQ ETK+FRQDIFKRR+
Sbjct: 252 IHDLQEEAKHQEMEDKDAAMAVIRRQKMLESEKENIEKRPFMDIQIETKRFRQDIFKRRH 311
Query: 311 RARAIEKQN 319
RAR IEKQN
Sbjct: 312 RARVIEKQN 320
>Medtr3g091700.1 | RWP-RK domain protein | LC |
chr3:41746533-41744642 | 20130731
Length = 261
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 86/148 (58%), Gaps = 18/148 (12%)
Query: 173 QDNEIEVESLTGLVGKKKRAPSNHI-----ANIAYSDLVKYFDMPIVEASRRLNVGLTVL 227
++NE E + L+ LV ++ S I +++ + D+ K+FD+PI A+++LNVG+T L
Sbjct: 122 KENEWENQELSSLVPLALQSSSTSIIRKRSSSLQFDDIKKHFDVPITMAAKKLNVGVTFL 181
Query: 228 KKKCREFGIPRWPHRKIKSLDSLIHDLQEMAKHQELEDKAAAMAVMKRQKMLESEKENIE 287
KK+CRE I RWPHRK++SL LI +L++ + K MLE +K+ +E
Sbjct: 182 KKRCRELNITRWPHRKLRSLMLLIDNLKD-------------KGLTKEVAMLEKQKKMLE 228
Query: 288 KQPFIEIQSETKKFRQDIFKRRYRARAI 315
K P + + E KK RQ FK Y+ R +
Sbjct: 229 KLPGMHLNDEIKKLRQACFKANYKNRKL 256
>Medtr1g069025.1 | RWP-RK domain protein | LC |
chr1:29589381-29590085 | 20130731
Length = 234
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 88/153 (57%), Gaps = 26/153 (16%)
Query: 169 ESELQDNEIEV------ESLTGLVGKKKRAPSNHIANIAYSDLVKYFDMPIVEASRRLNV 222
E+E ++ E+ + S TG++ +KR+ S + Y D+ K+FD+PI A+ ++NV
Sbjct: 97 ENEWENQELSLVPLALPSSSTGII--RKRSSS-----LQYDDIKKHFDVPITMAAEKMNV 149
Query: 223 GLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEMAKHQELEDKAAAMAVMKRQKMLESE 282
G+T+LKK+CRE I RW HRK++SL LI +L+E +E+ MLE
Sbjct: 150 GVTLLKKRCRELNITRWSHRKLRSLMLLIENLKEKGLTEEI-------------AMLEKP 196
Query: 283 KENIEKQPFIEIQSETKKFRQDIFKRRYRARAI 315
K+ +EK P +++ E KK RQ FK Y+ R +
Sbjct: 197 KKMLEKLPGMDLNDEIKKLRQACFKANYKNRKL 229
>Medtr3g435550.1 | RWP-RK domain protein | HC |
chr3:11674227-11672839 | 20130731
Length = 192
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 82/137 (59%), Gaps = 8/137 (5%)
Query: 180 ESLTGLVGKKKRAPSNHIANIAYSDLV-KYFDMPIVEASRRLNVGLTVLKKKCREFGIPR 238
E++ + K KR + A + + + +YF MPI +A+R LNVGLT LKK+CR+ GI R
Sbjct: 38 ENVAKEIVKGKRCREENSARMLTKETISEYFYMPISQAARELNVGLTHLKKRCRDLGIQR 97
Query: 239 WPHRKIKSLDSLIHDLQEMAKHQELEDKAAAMAVMKRQKMLESEKENIEKQPFIEIQSET 298
WPHRK+ SL +LI ++QE + + + A ++L+ E + +E++P +++ T
Sbjct: 98 WPHRKLMSLQTLIKNVQEQGNEYDEKIRNAV-------EVLQKEMKKVEEKPDLQLAENT 150
Query: 299 KKFRQDIFKRRYRARAI 315
K+ RQ FK Y+ R +
Sbjct: 151 KRLRQACFKANYKKRRL 167
>Medtr3g104830.1 | RWP-RK domain protein | LC |
chr3:48320651-48318576 | 20130731
Length = 498
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 68/119 (57%), Gaps = 14/119 (11%)
Query: 166 EEDESELQDNEIEVESLTGLVGKKKRAPSNHIANIAYSDLVKYFDMPIVEASRRLNVGL- 224
E+++ ++ DN +L L ++K++ A + SDL YF +PI EA+ V L
Sbjct: 370 EQEQEQMGDNG----TLRNLSEQRKKS-----AKLKLSDLCDYFHLPIDEAADHEKVKLC 420
Query: 225 -TVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEMAKHQELEDKAAAMAVMKRQKMLESE 282
TVLKK CR+ G+PRWPHRK+K SL+ ++ +AK E +D A + K L++E
Sbjct: 421 PTVLKKTCRKAGLPRWPHRKVK---SLLKQIKLLAKQWEGQDPEARARTEREIKSLQTE 476
>Medtr0140s0010.1 | RWP-RK domain protein | LC |
scaffold0140:2206-3249 | 20130731
Length = 238
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 230 KCREFGIPRWPHRKIKSLDSLIHDLQEMAKHQELEDKAAAMAVMKRQKMLESEKENIEKQ 289
KCRE GI RWPHRK+ SL +LI+++QE+ K L M + K LE E + +E+
Sbjct: 150 KCRELGIRRWPHRKLMSLQTLINNIQELGKEDGLRSDEKFMDIEK----LEEEMKLVEEM 205
Query: 290 PFIEIQSETKKFRQ 303
P +++Q TK+ RQ
Sbjct: 206 PDMQLQDHTKRLRQ 219
>Medtr3g465110.1 | RWP-RK domain protein | LC |
chr3:26325181-26327770 | 20130731
Length = 550
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 167 EDESELQDNEIEVESLTGLVGKKKRAPSNHIANIAYSDLVKYFDMPIVEASRRLNVGLTV 226
E E E Q EIE L ++KR A +D V YF +P+ EA+ R+N+ +
Sbjct: 414 EQEQE-QVGEIETPEKRNLSEQRKRC-----AQFTLADFVDYFHLPMEEAAARMNIAAST 467
Query: 227 LKKKCREFGIPRWPHRKIKSLDSLIHDLQEMAKHQE 262
LKK R + RWPHRK+K L I LQ Q+
Sbjct: 468 LKKISRRTKLRRWPHRKVKCLLRQIAILQNQLDRQD 503
>Medtr4g068000.3 | plant regulator RWP-RK family protein | HC |
chr4:25526985-25532764 | 20130731
Length = 912
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 149 SEIALPKRDLDLNCLPYEEDESELQDNEIEVESLTGLVGKKKRAPSNHIA---NIAYSDL 205
S+IA D DL + + E + N+ T G +K+A A N++ S L
Sbjct: 531 SQIAFSSGDNDLFQMSFNETNLKNSGNQAAYSQATS--GSRKQAEKKRSAVEKNVSLSVL 588
Query: 206 VKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEM 257
+YF + +A++++ V T LK+ CR+ GI RWP RKI ++ + +Q +
Sbjct: 589 QQYFSGSLKDAAKKIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTV 640
>Medtr4g068000.2 | plant regulator RWP-RK family protein | HC |
chr4:25527942-25532685 | 20130731
Length = 912
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 149 SEIALPKRDLDLNCLPYEEDESELQDNEIEVESLTGLVGKKKRAPSNHIA---NIAYSDL 205
S+IA D DL + + E + N+ T G +K+A A N++ S L
Sbjct: 531 SQIAFSSGDNDLFQMSFNETNLKNSGNQAAYSQATS--GSRKQAEKKRSAVEKNVSLSVL 588
Query: 206 VKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEM 257
+YF + +A++++ V T LK+ CR+ GI RWP RKI ++ + +Q +
Sbjct: 589 QQYFSGSLKDAAKKIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTV 640
>Medtr4g068000.1 | plant regulator RWP-RK family protein | HC |
chr4:25526985-25532764 | 20130731
Length = 912
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 149 SEIALPKRDLDLNCLPYEEDESELQDNEIEVESLTGLVGKKKRAPSNHIA---NIAYSDL 205
S+IA D DL + + E + N+ T G +K+A A N++ S L
Sbjct: 531 SQIAFSSGDNDLFQMSFNETNLKNSGNQAAYSQATS--GSRKQAEKKRSAVEKNVSLSVL 588
Query: 206 VKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEM 257
+YF + +A++++ V T LK+ CR+ GI RWP RKI ++ + +Q +
Sbjct: 589 QQYFSGSLKDAAKKIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTV 640
>Medtr3g115400.1 | plant regulator RWP-RK family protein | HC |
chr3:53964310-53969452 | 20130731
Length = 909
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 186 VGKKKRAPSNHIANIAYSDLVKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIK 245
G+K+RA + I L +YF + +A++ + V T LK+ CR+ GI RWP RKIK
Sbjct: 582 TGEKRRAKAEK--TITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIK 639
Query: 246 SLDSLIHDLQ 255
+ + LQ
Sbjct: 640 KVGHSLQKLQ 649
>Medtr3g115400.2 | plant regulator RWP-RK family protein | HC |
chr3:53964003-53969505 | 20130731
Length = 909
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 186 VGKKKRAPSNHIANIAYSDLVKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIK 245
G+K+RA + I L +YF + +A++ + V T LK+ CR+ GI RWP RKIK
Sbjct: 582 TGEKRRAKAEK--TITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIK 639
Query: 246 SLDSLIHDLQ 255
+ + LQ
Sbjct: 640 KVGHSLQKLQ 649