Miyakogusa Predicted Gene

Lj2g3v1643250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1643250.1 Non Characterized Hit- tr|I1LM09|I1LM09_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,81.27,0,DUF607,Coiled-coil domain containing protein 109,
C-terminal; SUBFAMILY NOT NAMED,NULL; FAMILY NOT N,CUFF.37598.1
         (332 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g063050.1 | transmembrane protein, putative | HC | chr3:28...   412   e-115
Medtr5g076060.1 | transmembrane protein, putative | HC | chr5:32...   397   e-110
Medtr1g021955.1 | PPR containing plant-like protein | HC | chr1:...   148   6e-36
Medtr8g078170.1 | PPR containing plant-like protein | HC | chr8:...   147   2e-35
Medtr2091s0010.1 | PPR containing plant-like protein | HC | scaf...   146   3e-35
Medtr5g019350.1 | PPR containing plant-like protein | HC | chr5:...   141   1e-33

>Medtr3g063050.1 | transmembrane protein, putative | HC |
           chr3:28538072-28535383 | 20130731
          Length = 340

 Score =  412 bits (1059), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/326 (65%), Positives = 249/326 (76%), Gaps = 8/326 (2%)

Query: 15  SLSKRVSAVVDVSLGYGEKFHPLEPPLLGLRGFGT--EMCGGRGRGRGVTSLSVVLNQIK 72
           S +KRVS++V+++ G+ EK      PLLGLR   T     GG  RG+G    SV+LNQ+K
Sbjct: 15  SFTKRVSSIVNLTHGFDEKVQSFGSPLLGLRSVVTVTHGGGGDRRGKGFGYFSVMLNQMK 74

Query: 73  R------XXXXXXXXXXXXXXXXTEEDSISFSEAKRLMRLVNVESLRMKLGVEGKEVVSY 126
           R                        E++IS SEAK+LMRLVNVE+L+M+LG+ GKE++SY
Sbjct: 75  RGLSSSSSSSSNVVGDGGNGNNNERENTISSSEAKKLMRLVNVETLKMELGMGGKEIISY 134

Query: 127 SELLQACESAGIARNQEEAASFAKVLDEAGVVLLFRDKVYLHPDKVVDLIRKAVPLALTS 186
            ELLQAC+S+GIARNQ+EAA FAKVLD+AGVVLLFRDKVYLHPDKVVDLIR+AVPLALTS
Sbjct: 135 FELLQACQSSGIARNQDEAAKFAKVLDDAGVVLLFRDKVYLHPDKVVDLIRRAVPLALTS 194

Query: 187 ENDPIRXXXXXXXXXXXXIDVLAHKQMRRILWFGLGCSIITVGLFFRLTFWEFSWDVMEP 246
           +NDP+R            ID+LAHKQ+RR+LW GLG  +ITVGLFFRLTFWEFSWDVMEP
Sbjct: 195 DNDPMREELMKLQEKKKEIDLLAHKQVRRVLWSGLGFGVITVGLFFRLTFWEFSWDVMEP 254

Query: 247 IAFFTTTSGIVIGYAYFLFTRRDPTYQDFMKRLFLSRQRKLCKRQKFDVGRFNELQCKCK 306
           IAFF TT+G+V GYAYFLFT RDPTYQD +KRLFL RQRKLCK+Q FDV RF ELQCKCK
Sbjct: 255 IAFFVTTTGLVTGYAYFLFTSRDPTYQDLLKRLFLRRQRKLCKKQNFDVERFMELQCKCK 314

Query: 307 TPLHSRTVLKNRIGEDLDLEDALHRD 332
           T LHSR+VLKN IG DLDLEDALHRD
Sbjct: 315 THLHSRSVLKNSIGVDLDLEDALHRD 340


>Medtr5g076060.1 | transmembrane protein, putative | HC |
           chr5:32397830-32394559 | 20130731
          Length = 333

 Score =  397 bits (1019), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/326 (61%), Positives = 243/326 (74%), Gaps = 11/326 (3%)

Query: 16  LSKRVSAVVDVSLGYGEKFHPLEPPLLGLRGFGTEMCGGRGRGRGVTSLSVVLNQIKRXX 75
           L KR  ++ + +  YG K    +P L+ +R F  E  G + +G G  S+ VV+NQ+KR  
Sbjct: 10  LRKRAYSIFNGNHSYGGKIQSFDPFLMNMRDFRLEY-GEKRKGVGYFSV-VVMNQMKRGM 67

Query: 76  XXXXXXXXXXXXXXT---------EEDSISFSEAKRLMRLVNVESLRMKLGVEGKEVVSY 126
                                   ++++ISFSEAK+LMRLVNVESL+MKLG++GKEV+SY
Sbjct: 68  CSSSSDSSNNDSSENGGVQSNGKGKDETISFSEAKKLMRLVNVESLKMKLGMDGKEVISY 127

Query: 127 SELLQACESAGIARNQEEAASFAKVLDEAGVVLLFRDKVYLHPDKVVDLIRKAVPLALTS 186
           +EL++ACES G+ARN EEAA++AKVLDEAGV+LLFRDKVYLHPDKVVDL+R+AVPLALT+
Sbjct: 128 NELIEACESMGVARNSEEAAAYAKVLDEAGVILLFRDKVYLHPDKVVDLVRRAVPLALTA 187

Query: 187 ENDPIRXXXXXXXXXXXXIDVLAHKQMRRILWFGLGCSIITVGLFFRLTFWEFSWDVMEP 246
           +NDP+R            IDVLAH+QMRRILW GLG  ++TV LFFRLTFWEFSWDVMEP
Sbjct: 188 DNDPLREELKKLLDKKEEIDVLAHRQMRRILWSGLGFGVVTVSLFFRLTFWEFSWDVMEP 247

Query: 247 IAFFTTTSGIVIGYAYFLFTRRDPTYQDFMKRLFLSRQRKLCKRQKFDVGRFNELQCKCK 306
           I FFTT +G+VIGYAYFL+T RDPTYQDFMKRLFLSRQRKL KR  FDV R  ELQ  CK
Sbjct: 248 ITFFTTATGLVIGYAYFLYTSRDPTYQDFMKRLFLSRQRKLYKRYNFDVVRCKELQYMCK 307

Query: 307 TPLHSRTVLKNRIGEDLDLEDALHRD 332
           TPL ++T+LKNRIG D DL+DALH+D
Sbjct: 308 TPLDAKTILKNRIGVDCDLDDALHKD 333


>Medtr1g021955.1 | PPR containing plant-like protein | HC |
           chr1:6701849-6698130 | 20130731
          Length = 354

 Score =  148 bits (374), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 82/235 (34%), Positives = 121/235 (51%), Gaps = 3/235 (1%)

Query: 90  TEEDSISFSEAKRLMRLVNVESLRMKLGVEGKEVVSYSELLQACESAGIARNQEEAASFA 149
           T     +  +A+++++   +E L+ KL    +  VSY E L+ C  +    N E+   FA
Sbjct: 110 TSPAKFTVEDARKILKASQMEKLKRKLREVSENSVSYGEFLRICVES--CENHEQGVEFA 167

Query: 150 KVLDEAGVVLLFRDKVYLHPDKVVDLIRKAVPLALTSENDPIRXXXXXXXXXXXXIDVLA 209
           K+LDE+G V++  + V+L P++V   I   +  ++ S NDP R            ID  A
Sbjct: 168 KILDESGNVIVLGNVVFLRPEQVAKSIESIMYQSIASPNDPRRKELENMEKQKAMIDGKA 227

Query: 210 HKQMRRILWFGLGCSIITVGLFFRLTFWEFSWDVMEPIAFFTTTSGIVIGYAYFLFTRRD 269
             Q++  L+ GLG   I    F RLTFWE SWDVMEP+ FF T+      Y +F+ T  +
Sbjct: 228 KAQVQTELYCGLGFLTIQTLGFMRLTFWELSWDVMEPVCFFVTSLHFAFAYLFFIRTSTE 287

Query: 270 PTYQDFMKRLFLSRQRKLCKRQKFDVGRFNELQCKCKTPLHSRTVLKNRIGEDLD 324
           PT+Q +  R F+S+Q +L K   FD  R+NEL CK   P +   V  N   E   
Sbjct: 288 PTFQGYFHRRFMSKQERLMKTYNFDANRYNEL-CKACYPSNHVGVGANAKAETFS 341


>Medtr8g078170.1 | PPR containing plant-like protein | HC |
           chr8:33310114-33314736 | 20130731
          Length = 349

 Score =  147 bits (370), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 120/213 (56%), Gaps = 2/213 (0%)

Query: 90  TEEDSISFSEAKRLMRLVNVESLRMKLGVEGKEVVSYSELLQACESAGIARNQEEAASFA 149
           TEE   +  + ++L+R   +E+++ K+ +  +  V+YSE ++ C       +QE+A   A
Sbjct: 113 TEELKSTAEDVRKLLRATQLEAVKSKIRMIQQSCVTYSEFVEMC--GENCSDQEQAKKIA 170

Query: 150 KVLDEAGVVLLFRDKVYLHPDKVVDLIRKAVPLALTSENDPIRXXXXXXXXXXXXIDVLA 209
           K+LD++  V++  D V+L P++V   I+   P+     N+               ID  A
Sbjct: 171 KILDDSATVIILGDVVFLKPEQVAKTIQALFPVPAPKPNEAETKELEEMEKQKATIDSRA 230

Query: 210 HKQMRRILWFGLGCSIITVGLFFRLTFWEFSWDVMEPIAFFTTTSGIVIGYAYFLFTRRD 269
           H   RR LW GLG  ++ +    RLTFWE +WDVMEPI F+ T+   + GY +FL T ++
Sbjct: 231 HTMARRELWGGLGFVLVQILASMRLTFWELNWDVMEPICFYATSMYFMAGYTFFLRTSKE 290

Query: 270 PTYQDFMKRLFLSRQRKLCKRQKFDVGRFNELQ 302
           P+++ F +  F ++Q++L K   FD+ R+N+L+
Sbjct: 291 PSFEGFYQSRFSTKQKQLMKLHNFDIARYNQLR 323


>Medtr2091s0010.1 | PPR containing plant-like protein | HC |
           scaffold2091:94-951 | 20130731
          Length = 285

 Score =  146 bits (369), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 7/212 (3%)

Query: 94  SISFSEAKRLMRLVNVESLRMKLGVEGKEVVSYSELLQAC-ESAG--IARNQEEAASFAK 150
           +IS  +A++L++   VE++R +L       V Y+   Q C E+AG   A  +E  AS   
Sbjct: 30  AISVEDARKLLKASRVEAVRARLRAIPSSCVPYTHFAQICREAAGGVDAFGREIEAS--- 86

Query: 151 VLDEAGVVLLFRDKVYLHPDKVVDLIRKAVPLALTSENDPIRXXXXXXXXXXXXIDVLAH 210
            LD++G V++  D V L P++V   I+  + ++     DP              ID  A 
Sbjct: 87  -LDKSGAVVIVGDVVLLRPEQVARAIQNVILMSPGGGVDPRSTELREMETEKAIIDTKAE 145

Query: 211 KQMRRILWFGLGCSIITVGLFFRLTFWEFSWDVMEPIAFFTTTSGIVIGYAYFLFTRRDP 270
            Q++R LW GLG  ++   +F RLTFWE SWDVMEPI FFTT++  ++GYA+FL T ++P
Sbjct: 146 AQVKRELWAGLGVVLLQTTVFIRLTFWELSWDVMEPICFFTTSTSFMLGYAFFLRTAKEP 205

Query: 271 TYQDFMKRLFLSRQRKLCKRQKFDVGRFNELQ 302
           +++ F    F SRQ++L K   F++ RFNEL+
Sbjct: 206 SFEGFFAGRFASRQQRLMKAHGFNLHRFNELR 237


>Medtr5g019350.1 | PPR containing plant-like protein | HC |
           chr5:7301729-7299565 | 20130731
          Length = 343

 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 121/215 (56%), Gaps = 2/215 (0%)

Query: 91  EEDSISFSEAKRLMRLVNVESLRMKLGVEGKEVVSYSELLQACESAGIARNQEEAASFAK 150
           +ED +S S+ K+L+++  +E ++ +L    K  V+ SEL++ C  +    + ++A    K
Sbjct: 109 KEDGVSVSDVKKLLKVAQLEMVKSRLRESSKSCVTVSELIRIC--SEYCSDHDQAVKIVK 166

Query: 151 VLDEAGVVLLFRDKVYLHPDKVVDLIRKAVPLALTSENDPIRXXXXXXXXXXXXIDVLAH 210
           +LD++  V++  D V+L P++V   ++  +P      +D +R            ID  A 
Sbjct: 167 MLDDSAAVIILGDVVFLRPEQVAKTLQSLLPTPGIKVSDSVRKEYEEMEKKKLAIDEEAE 226

Query: 211 KQMRRILWFGLGCSIITVGLFFRLTFWEFSWDVMEPIAFFTTTSGIVIGYAYFLFTRRDP 270
             + R LW GLG  ++   +  RLTFWE +WDVMEPI F+ T+   + GY +FL T ++P
Sbjct: 227 ALVDRELWGGLGFIMVKTAVLMRLTFWELTWDVMEPICFYLTSMYFMTGYTFFLKTGKEP 286

Query: 271 TYQDFMKRLFLSRQRKLCKRQKFDVGRFNELQCKC 305
           +++ F +  F S+Q++L K   FD+ ++N+L   C
Sbjct: 287 SFRGFYEARFSSKQKRLMKLHNFDIEKYNKLSNVC 321