Miyakogusa Predicted Gene
- Lj2g3v1643230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1643230.1 CUFF.37596.1
(912 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC | chr3:28... 1404 0.0
Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC | ... 295 1e-79
Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC | ... 295 1e-79
Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein... 285 1e-76
Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein... 285 2e-76
Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC | ... 260 5e-69
Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC | ... 187 6e-47
Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC | ... 187 6e-47
Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC | ... 186 6e-47
Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC | ... 186 8e-47
Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC | ... 181 3e-45
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 84 7e-16
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 84 7e-16
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 80 6e-15
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 80 6e-15
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 79 1e-14
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 78 4e-14
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 69 2e-11
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 69 2e-11
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 66 2e-10
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 66 2e-10
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 65 2e-10
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 65 3e-10
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 65 3e-10
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 60 8e-09
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 60 1e-08
Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 59 2e-08
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 59 2e-08
Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 59 3e-08
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 59 3e-08
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 58 4e-08
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 58 4e-08
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 58 4e-08
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 58 5e-08
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 58 5e-08
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 58 5e-08
Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 55 2e-07
Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 55 4e-07
Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like prote... 55 4e-07
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 55 4e-07
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 52 4e-06
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 51 5e-06
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 51 5e-06
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 51 5e-06
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 51 5e-06
Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family pro... 50 8e-06
>Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC |
chr3:28524625-28534220 | 20130731
Length = 908
Score = 1404 bits (3633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/923 (75%), Positives = 770/923 (83%), Gaps = 26/923 (2%)
Query: 1 MDAMSSVLKNYFGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGI 60
MD SVLK+YFGF FRPYQ++ RDC+VVMATGSGKSLCYQVPPLVVKKTGI
Sbjct: 1 MDTTLSVLKDYFGFLSFRPYQREVIEKIIEKRDCLVVMATGSGKSLCYQVPPLVVKKTGI 60
Query: 61 VVSPLISLMQDQVMALKERGIKAEYLGSAQKDFTVQTKAEHGQFDILFMTPEKACTISTS 120
VVSPLISLMQDQVMALK+RGIKAEYL SAQKD+TVQ+KAE GQFDILFMTPEKACTI TS
Sbjct: 61 VVSPLISLMQDQVMALKQRGIKAEYLSSAQKDYTVQSKAERGQFDILFMTPEKACTIPTS 120
Query: 121 FWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATATEKVRF 180
FWSNLLK GISLFAVDEAHCISEWGHDFRVEYK LDKLR VL++VP+VGLTATATEKVRF
Sbjct: 121 FWSNLLKEGISLFAVDEAHCISEWGHDFRVEYKQLDKLRGVLLDVPYVGLTATATEKVRF 180
Query: 181 DIIKSLKMNNPYVLVGSFDRANLFYGVKPFSRGQSFIDELVREISKEVDSGTSTIIYCTT 240
DI SLKMNNPYV+VGSFDR NLFYGVK F+RGQSFIDELV E+SKEV +G STIIYCTT
Sbjct: 181 DITNSLKMNNPYVVVGSFDRPNLFYGVKQFNRGQSFIDELVEEVSKEVANGCSTIIYCTT 240
Query: 241 IKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNI 300
IKDVEQI KSLTE GI AGMYHGQM+GKSREESHRLFVRDE+QIMVATIAFGMGIDKPNI
Sbjct: 241 IKDVEQIYKSLTEVGINAGMYHGQMDGKSREESHRLFVRDEMQIMVATIAFGMGIDKPNI 300
Query: 301 RKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGDFAKGEFYCGDIKSEIQRRAIM 360
RKVIHYGCPK++ESYYQESGRCGRDGI SVCWLYYTR DFAKG+FY D+KSE Q+RA+M
Sbjct: 301 RKVIHYGCPKNLESYYQESGRCGRDGIASVCWLYYTRSDFAKGDFYAADLKSENQKRAVM 360
Query: 361 ESLRAAEHYCVLPTCRRKFLLEYFGENFPADRCGNCDNCLVAKKERDLSREVFLLMACIH 420
ESL AA+ YC+ TCRRKFLLE+FGE A+RCGNCDNC V+K++RDLSRE FLLMACIH
Sbjct: 361 ESLLAAQQYCLSATCRRKFLLEHFGEKISAERCGNCDNCKVSKQQRDLSREAFLLMACIH 420
Query: 421 SCKGNWGLNIPIDILRGSRAKKIIDAQYDKLPLHGLGKTYPANWWKALGHQLICQGYLKE 480
SC G WGLN+PIDILRGSRAKKI+DAQYDKLPLHGLGKTY ANWWKALGHQLI GYLKE
Sbjct: 421 SCNGRWGLNMPIDILRGSRAKKIMDAQYDKLPLHGLGKTYQANWWKALGHQLISLGYLKE 480
Query: 481 TFIDIYRAISVSSKGEEFLASCRPDYQPPLILSLTTEMLGEEENGSTEDFKILATSESGG 540
D +R ISVSSKGE+FLASCRPDYQPPL+L L E+ EEEN S E+ KIL TSES G
Sbjct: 481 VVRDTFRLISVSSKGEKFLASCRPDYQPPLVLPLVGELE-EEENRSREEIKILPTSESEG 539
Query: 541 FSXXXXXXXXXXXXXXXXXARSVGTAPYALCGDQTIKKIALTRPSTKARLANIDGVNQHL 600
FS A+SVGTAPYALCGDQTIKKIALTRPS+KARLA IDGVNQHL
Sbjct: 540 FSEAEGQLYQMLLEERLKLAKSVGTAPYALCGDQTIKKIALTRPSSKARLALIDGVNQHL 599
Query: 601 LTRYGDHFLGVIQKLSQGLNLSLDGEASMQTNEVRKVSPVNINKSRKLTPAKFEAWKMWH 660
+TRYG++F+ I+KLS+ LNLSLDG S+QT+EVRKVSP+ NKS KL+ AKF+AWKMWH
Sbjct: 600 VTRYGEYFIQAIEKLSRELNLSLDGVPSIQTSEVRKVSPIVTNKSTKLSGAKFDAWKMWH 659
Query: 661 EDGLSIEKIANFPGRSAPIKEQTVAEYLLEAAQEGLPFDWTRFCEMIGLTQEIMSEIQGA 720
E+GLS++KIANFPGRSAPI+EQTVA+YL++AAQEGLPFDW RFCE IGL Q+ +S IQ A
Sbjct: 660 EEGLSLQKIANFPGRSAPIQEQTVAQYLMDAAQEGLPFDWPRFCEAIGLKQDYISAIQAA 719
Query: 721 ILKVGSEDKLKPIKNELPEDITYQHIKAYLTMRSCG---------GPQSGKDGEXXXXXX 771
I+KVGS DKLKPIKNELPE+ITY HIKAYLTMR+CG G QS KDGE
Sbjct: 720 IVKVGSADKLKPIKNELPEEITYPHIKAYLTMRTCGISLESIQSEGHQSVKDGE------ 773
Query: 772 XXXXXXXXXXLSEPHLETCYKERPLEADITGKSLKENFDLEIDEVVLSGPVNGSTVQKLP 831
LSEP LET E +EADI+ +S +EIDEV SGPVNG VQKLP
Sbjct: 774 ---AVNNASNLSEPPLETRNLESHIEADISTES-----TMEIDEVASSGPVNGCQVQKLP 825
Query: 832 LACEGEFTAKRQKVA--EEVKSVKLKATESSVVEWLKNLDEGATLIDVLEHFNGSDEDSV 889
L+CE EFT+KR K++ EEV +KLKATESSVVEWLKN DEGATL D+LEHFNGS+EDS+
Sbjct: 826 LSCEEEFTSKRLKISETEEVNLIKLKATESSVVEWLKNHDEGATLTDMLEHFNGSNEDSI 885
Query: 890 VEVLNCLECDFAIYKKGNMYRAM 912
VE+LN LE DF IYKKGNMYRAM
Sbjct: 886 VELLNSLESDFLIYKKGNMYRAM 908
>Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525936-18516322 | 20130731
Length = 728
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/433 (39%), Positives = 240/433 (55%), Gaps = 31/433 (7%)
Query: 2 DAMSSVLKNYFGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIV 61
+++ VL+ +FG+ DFR Q + RDC +M TG GKS+CYQ+P L + +V
Sbjct: 28 ESLVKVLRWHFGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIVLV 87
Query: 62 VSPLISLMQDQVMALKERGIKAEYLGS---AQKDFTVQTKAEHGQ--FDILFMTPEKACT 116
V PLI+LM++QVMALKE+GI AE+L S A+ + G+ +L++TPE T
Sbjct: 88 VCPLIALMENQVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELIAT 147
Query: 117 ISTSFWSNLLKAG----ISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTA 172
F S L K +SL A+DEAHCIS WGHDFR Y+ L LRS L +VP + LTA
Sbjct: 148 --PGFMSKLTKIHSRGLLSLIAIDEAHCISSWGHDFRPTYRKLSTLRSHLPDVPILALTA 205
Query: 173 TATEKVRFDIIKSLKMNNPYVLVGSFDRANLFYGVKPFSRGQSFIDELVREISKEVDS-- 230
TA KV+ D+++SL M N +L SF+R N++Y V R + +D+ ++S + S
Sbjct: 206 TAVPKVQKDVVESLHMQNALILKTSFNRPNIYYEV----RYKDLLDDSYSDLSDRLKSMG 261
Query: 231 GTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIA 290
IIYC + +S L++ GI YH +N K R ++ + +++VAT+A
Sbjct: 262 DVCAIIYCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVA 321
Query: 291 FGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGDFAKGEFYCGD- 349
FGMGID+ ++R V H+ PKS+E++YQESGR GRD +PS LYY D + EF +
Sbjct: 322 FGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRRRMEFILRNS 381
Query: 350 --------IKSEIQRRAIMESLRAAEHYCVLPTCRRKFLLEYFGENFPADRCG-NCDNC- 399
E R + + YC CRRK +LE FGE CG CD+C
Sbjct: 382 GNKKSQSSSSQEESTRMSLTAFNQMVEYCEGSGCRRKIILESFGEQVTTSLCGKTCDSCR 441
Query: 400 ---LVAKKERDLS 409
LVA+ DL+
Sbjct: 442 HPNLVARNLEDLT 454
>Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525893-18516340 | 20130731
Length = 727
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/433 (39%), Positives = 240/433 (55%), Gaps = 31/433 (7%)
Query: 2 DAMSSVLKNYFGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIV 61
+++ VL+ +FG+ DFR Q + RDC +M TG GKS+CYQ+P L + +V
Sbjct: 28 ESLVKVLRWHFGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIVLV 87
Query: 62 VSPLISLMQDQVMALKERGIKAEYLGS---AQKDFTVQTKAEHGQ--FDILFMTPEKACT 116
V PLI+LM++QVMALKE+GI AE+L S A+ + G+ +L++TPE T
Sbjct: 88 VCPLIALMENQVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELIAT 147
Query: 117 ISTSFWSNLLKAG----ISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTA 172
F S L K +SL A+DEAHCIS WGHDFR Y+ L LRS L +VP + LTA
Sbjct: 148 --PGFMSKLTKIHSRGLLSLIAIDEAHCISSWGHDFRPTYRKLSTLRSHLPDVPILALTA 205
Query: 173 TATEKVRFDIIKSLKMNNPYVLVGSFDRANLFYGVKPFSRGQSFIDELVREISKEVDS-- 230
TA KV+ D+++SL M N +L SF+R N++Y V R + +D+ ++S + S
Sbjct: 206 TAVPKVQKDVVESLHMQNALILKTSFNRPNIYYEV----RYKDLLDDSYSDLSDRLKSMG 261
Query: 231 GTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIA 290
IIYC + +S L++ GI YH +N K R ++ + +++VAT+A
Sbjct: 262 DVCAIIYCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVA 321
Query: 291 FGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGDFAKGEFYCGD- 349
FGMGID+ ++R V H+ PKS+E++YQESGR GRD +PS LYY D + EF +
Sbjct: 322 FGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRRRMEFILRNS 381
Query: 350 --------IKSEIQRRAIMESLRAAEHYCVLPTCRRKFLLEYFGENFPADRCG-NCDNC- 399
E R + + YC CRRK +LE FGE CG CD+C
Sbjct: 382 GNKKSQSSSSQEESTRMSLTAFNQMVEYCEGSGCRRKIILESFGEQVTTSLCGKTCDSCR 441
Query: 400 ---LVAKKERDLS 409
LVA+ DL+
Sbjct: 442 HPNLVARNLEDLT 454
>Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr2:578880-586948 | 20130731
Length = 1159
Score = 285 bits (730), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 267/514 (51%), Gaps = 36/514 (7%)
Query: 9 KNYFGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIVVSPLISL 68
K FG FRP Q++ D V+M TG GKSL YQ+P L+ +V+SPL+SL
Sbjct: 401 KKVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALINPGITLVISPLVSL 460
Query: 69 MQDQVMALKERGIKAEYLGS-----AQKDFTVQTKAEHGQFDILFMTPEKAC---TISTS 120
+QDQ+M L + I A YL + Q++ + +++ ++ +L++TPEK +
Sbjct: 461 IQDQIMHLLQANIPAAYLSANLEWAEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQ 520
Query: 121 FWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATATEKVRF 180
S + +S +DEAHC+S+WGHDFR +Y+ L L+ P + LTATAT V+
Sbjct: 521 LESLHGRELLSRIVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNTPVLALTATATASVKE 580
Query: 181 DIIKSLKMNNPYVLVGSFDRANLFYGVKPFSRG-QSFIDELVREISKEVDSGTSTIIYCT 239
D++++L + N V SF+R NL+Y V P ++ ID+ +RE D IIYC
Sbjct: 581 DVVQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIRE--NHFDE--CGIIYCL 636
Query: 240 TIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPN 299
+ D E++++ L E G K YHG M+ R R + +DE+ I+ AT+AFGMGI+KP+
Sbjct: 637 SRMDCEKVAEKLQECGHKCAFYHGSMDPDQRAHVQRQWSKDEINIICATVAFGMGINKPD 696
Query: 300 IRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGDFAK-------GEFYCGDIKS 352
+R VIH+ PKS+E Y+QE GR GRDG S C LYY+ D+ + G ++ S
Sbjct: 697 VRFVIHHSLPKSVEGYHQECGRAGRDGQRSSCVLYYSYSDYIRVKHMLSVGAVEQSNMTS 756
Query: 353 EIQRRAIMESLRAAE----------HYCVLPT-CRRKFLLEYFGENFPADRCG-NCDNC- 399
R S R E YC CRR L +FGE F + C CDNC
Sbjct: 757 GYSRFNATNSGRLLETNTENLLRMVSYCENDVDCRRLIQLVHFGEKFDSSNCHKTCDNCV 816
Query: 400 -LVAKKERDLSREVFLLMACIHSCKGNWGLNIPIDILRGSRAKKIIDAQYDKLPLHGLGK 458
+ + E+D++ L+ + + +++ RGS ++ + +++ + LHG GK
Sbjct: 817 KITSFVEKDVTEIAKQLVELVKLTGQKVSASHILEVYRGSLSQMVKKHRHETVRLHGAGK 876
Query: 459 TYPANWWKALGHQLICQGYLKETF--IDIYRAIS 490
+ H L+ + ++ E D Y ++S
Sbjct: 877 HLAKGEASRILHHLVVEDFIAEVVKKSDFYGSVS 910
>Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr5:10949368-10935495 | 20130731
Length = 685
Score = 285 bits (728), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/430 (37%), Positives = 235/430 (54%), Gaps = 40/430 (9%)
Query: 10 NYFGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIVVSPLISLM 69
N FG S +R QK+ RD +V+MA G GKSLCYQ+P ++ +VVSPL+SL+
Sbjct: 83 NIFGISSYRANQKEIINAILSGRDVLVIMAAGGGKSLCYQLPAVLRNGVALVVSPLLSLI 142
Query: 70 QDQVMALKERGIKAEYLGSA----QKDFTVQT--KAEHGQFDILFMTPEKACTISTSFWS 123
QDQVM L GI A L S + +Q+ + G +L++TPEK +
Sbjct: 143 QDQVMGLTALGIPAYMLTSTTSKDNEKVYIQSFWRRARGDLKLLYVTPEKITKKQEIY-- 200
Query: 124 NLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATATEKVRFDII 183
EAHC S+WGHDFR +YKNL L++ VP V LTATAT++V+ D++
Sbjct: 201 -------------EAHCCSQWGHDFRPDYKNLGILKTQFPNVPMVALTATATQRVQNDLV 247
Query: 184 KSLKMNNPYVLVGSFDRANLFYGVKPFSR-GQSFIDELVREISKEVDSGTSTIIYCTTIK 242
+ L + V + +R NLFY VK S + +DE+ I + + S I+YC + K
Sbjct: 248 EMLHIRRCVKFVSTVNRPNLFYMVKEKSSVSKVVVDEIAEFIQESYPNHESGIVYCFSRK 307
Query: 243 DVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRK 302
+ EQ++K L E GI AG YH M+ RE+ H + +++Q++V T+AFGMGI+KP++R
Sbjct: 308 ECEQVAKELRERGISAGHYHADMDVNDREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRF 367
Query: 303 VIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGDFAKGE---FYCGDIKSEIQRRAI 359
VIH+ KS+E+YYQESGR GRDG+PS C LY+ GD + FY +
Sbjct: 368 VIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGDVPRQSSMVFY---------ENSG 418
Query: 360 MESLRAAEHYCVLP-TCRRKFLLEYFGENFPADRC-GNCDNCLVA--KKERDLSREVFLL 415
+++L YC CRR +F E P C G CD C + E D+SR L+
Sbjct: 419 LQNLYDIVRYCQSKRQCRRSAFFRHFAE--PLQECNGMCDICAFSCEVNEVDVSRHAKLM 476
Query: 416 MACIHSCKGN 425
++ + + +
Sbjct: 477 VSLLQDIQAS 486
>Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37328725-37334465 | 20130731
Length = 603
Score = 260 bits (664), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 163/418 (38%), Positives = 225/418 (53%), Gaps = 44/418 (10%)
Query: 12 FGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQD 71
FG RP Q +D ++M TG GKSLCYQ+P + +VVSPL+SL+QD
Sbjct: 197 FGNKSLRPLQHQACKAALAKQDSFILMPTGGGKSLCYQLPATLQPGVTVVVSPLLSLIQD 256
Query: 72 QVMALKER-GIKAEYLGSAQKDFTVQTKAEHGQFD-----ILFMTPEKACTISTSFWSNL 125
Q++ L + GI A +L S Q + + D +L++TPE+ + SF L
Sbjct: 257 QIITLNLKFGIPATFLNSQQNASQAAAVLQELRKDKPSCKLLYVTPERIAG-NQSFVGIL 315
Query: 126 ----LKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATATEKVRFD 181
K ++ F VDEAHC+S+WGHDFR +Y+ L L+ VP + LTATAT VR D
Sbjct: 316 KCMHQKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGSLKQNFPRVPVMALTATATHPVRED 375
Query: 182 IIKSLKMNNPYVLVGSFDRANLFYGV-----KPFSR-GQSFIDELVREISKEVDSGTSTI 235
I+ +L++ + VL SFDR NL Y V +P + GQ +D + I
Sbjct: 376 ILNALRIPHAIVLERSFDRPNLKYEVIVKTKEPLKQLGQLLMDRFKSQCG---------I 426
Query: 236 IYCTTIKDVEQISKSLTE-AGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMG 294
+YC + + +SK L E IKA YH + + R + + EV I+ ATIAFGMG
Sbjct: 427 VYCLSKSECVDVSKFLNEKCKIKAAYYHAGLAARQRVAVQKKWHDGEVHIVCATIAFGMG 486
Query: 295 IDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGDFAK-------GEFYC 347
IDK ++R VIH KSIESYYQESGR GRD +P+VC Y + DF++ G+ Y
Sbjct: 487 IDKADVRFVIHNTMSKSIESYYQESGRAGRDNLPAVCIALYQKKDFSRVVCMIRNGQGY- 545
Query: 348 GDIKSEIQRRAIMESLRAAEHYCVLPT-CRRKFLLEYFGENFPADRC----GNCDNCL 400
K E + A+ ++ + + YC L CRR+ LLE+FGE+F C CDNCL
Sbjct: 546 ---KKESFKTAMAQA-KKMQQYCELKDECRRQTLLEHFGESFDRKNCKYGSSPCDNCL 599
>Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043472 | 20130731
Length = 768
Score = 187 bits (474), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 136/214 (63%), Gaps = 10/214 (4%)
Query: 5 SSVLKNYFGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIVVSP 64
S +L+ +FGFS + +QK+ RDC+V+ ATGSGKSLC+Q+P L+ K +V+SP
Sbjct: 153 SILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVVVVISP 212
Query: 65 LISLMQDQVMALKERGIKAEYLGSAQKDFTVQTKAEHGQFDILFMTPEKACTISTSFWSN 124
LISLM DQ + L + GI A +LGS Q D TV+ KA G + I+++ PE +
Sbjct: 213 LISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMRGMYSIVYICPETVLRLIQPLQKL 272
Query: 125 LLKAGISLFAVDEAHCISEWGHDFRVEYKNLD---------KLRSVLVEVPFVGLTATAT 175
GI+LFA+DE HC+S+WGHDFR Y L KL+S+ ++P + LTATAT
Sbjct: 273 AETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSLKFDIPMMALTATAT 332
Query: 176 EKVRFDIIKSLKMN-NPYVLVGSFDRANLFYGVK 208
++VR DI+KSL+++ + V++ SF R NL + VK
Sbjct: 333 KRVREDILKSLRLSKDTSVVLTSFFRPNLRFMVK 366
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 134/265 (50%), Gaps = 27/265 (10%)
Query: 234 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 293
TIIY T KD +I+K L ++G+KA Y+ + +H+ F + ++++VATIAFGM
Sbjct: 509 TIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGM 568
Query: 294 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGDFAKGEFYCGDIKSE 353
GIDK N+R++IHYG P+S+E+YYQE+GR GRDG + C LY + A+ +SE
Sbjct: 569 GIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILY---ANLARKPSLLPSRRSE 625
Query: 354 IQRRAIMESLRAAEHYCVLPT-CRRKFLLEYFGENFPADRCGNCDNCLVAKKER-DLSRE 411
+ L Y + + CR K L+EYFGE+F +C CD C +R +L E
Sbjct: 626 DMTKQAYIMLSDCFRYGMNTSCCRAKILVEYFGEDFSHQKCLLCDVCNNGPPQRLNLKEE 685
Query: 412 VFLLMACIHSCKGNWGLNIPI----DILRGSRAKKI------------IDAQYDKLPLHG 455
+L+ I ++ DI S+ +++ I Q+ K
Sbjct: 686 ACILLQTIMLAGNARSYSVDSSDNDDIHFNSKDRRLGERPSLTTLVRSIREQFQKF---- 741
Query: 456 LGKTYPANWWKALGHQLICQGYLKE 480
T WW+ L L +GY++E
Sbjct: 742 --LTTDILWWRGLTRILEAKGYIRE 764
>Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050187-37043472 | 20130731
Length = 768
Score = 187 bits (474), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 136/214 (63%), Gaps = 10/214 (4%)
Query: 5 SSVLKNYFGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIVVSP 64
S +L+ +FGFS + +QK+ RDC+V+ ATGSGKSLC+Q+P L+ K +V+SP
Sbjct: 153 SILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVVVVISP 212
Query: 65 LISLMQDQVMALKERGIKAEYLGSAQKDFTVQTKAEHGQFDILFMTPEKACTISTSFWSN 124
LISLM DQ + L + GI A +LGS Q D TV+ KA G + I+++ PE +
Sbjct: 213 LISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMRGMYSIVYICPETVLRLIQPLQKL 272
Query: 125 LLKAGISLFAVDEAHCISEWGHDFRVEYKNLD---------KLRSVLVEVPFVGLTATAT 175
GI+LFA+DE HC+S+WGHDFR Y L KL+S+ ++P + LTATAT
Sbjct: 273 AETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSLKFDIPMMALTATAT 332
Query: 176 EKVRFDIIKSLKMN-NPYVLVGSFDRANLFYGVK 208
++VR DI+KSL+++ + V++ SF R NL + VK
Sbjct: 333 KRVREDILKSLRLSKDTSVVLTSFFRPNLRFMVK 366
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 134/265 (50%), Gaps = 27/265 (10%)
Query: 234 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 293
TIIY T KD +I+K L ++G+KA Y+ + +H+ F + ++++VATIAFGM
Sbjct: 509 TIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGM 568
Query: 294 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGDFAKGEFYCGDIKSE 353
GIDK N+R++IHYG P+S+E+YYQE+GR GRDG + C LY + A+ +SE
Sbjct: 569 GIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILY---ANLARKPSLLPSRRSE 625
Query: 354 IQRRAIMESLRAAEHYCVLPT-CRRKFLLEYFGENFPADRCGNCDNCLVAKKER-DLSRE 411
+ L Y + + CR K L+EYFGE+F +C CD C +R +L E
Sbjct: 626 DMTKQAYIMLSDCFRYGMNTSCCRAKILVEYFGEDFSHQKCLLCDVCNNGPPQRLNLKEE 685
Query: 412 VFLLMACIHSCKGNWGLNIPI----DILRGSRAKKI------------IDAQYDKLPLHG 455
+L+ I ++ DI S+ +++ I Q+ K
Sbjct: 686 ACILLQTIMLAGNARSYSVDSSDNDDIHFNSKDRRLGERPSLTTLVRSIREQFQKF---- 741
Query: 456 LGKTYPANWWKALGHQLICQGYLKE 480
T WW+ L L +GY++E
Sbjct: 742 --LTTDILWWRGLTRILEAKGYIRE 764
>Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043455 | 20130731
Length = 876
Score = 186 bits (473), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 136/214 (63%), Gaps = 10/214 (4%)
Query: 5 SSVLKNYFGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIVVSP 64
S +L+ +FGFS + +QK+ RDC+V+ ATGSGKSLC+Q+P L+ K +V+SP
Sbjct: 153 SILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVVVVISP 212
Query: 65 LISLMQDQVMALKERGIKAEYLGSAQKDFTVQTKAEHGQFDILFMTPEKACTISTSFWSN 124
LISLM DQ + L + GI A +LGS Q D TV+ KA G + I+++ PE +
Sbjct: 213 LISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMRGMYSIVYICPETVLRLIQPLQKL 272
Query: 125 LLKAGISLFAVDEAHCISEWGHDFRVEYKNLD---------KLRSVLVEVPFVGLTATAT 175
GI+LFA+DE HC+S+WGHDFR Y L KL+S+ ++P + LTATAT
Sbjct: 273 AETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSLKFDIPMMALTATAT 332
Query: 176 EKVRFDIIKSLKMN-NPYVLVGSFDRANLFYGVK 208
++VR DI+KSL+++ + V++ SF R NL + VK
Sbjct: 333 KRVREDILKSLRLSKDTSVVLTSFFRPNLRFMVK 366
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 134/265 (50%), Gaps = 27/265 (10%)
Query: 234 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 293
TIIY T KD +I+K L ++G+KA Y+ + +H+ F + ++++VATIAFGM
Sbjct: 509 TIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGM 568
Query: 294 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGDFAKGEFYCGDIKSE 353
GIDK N+R++IHYG P+S+E+YYQE+GR GRDG + C LY + A+ +SE
Sbjct: 569 GIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILY---ANLARKPSLLPSRRSE 625
Query: 354 IQRRAIMESLRAAEHYCVLPT-CRRKFLLEYFGENFPADRCGNCDNCLVAKKER-DLSRE 411
+ L Y + + CR K L+EYFGE+F +C CD C +R +L E
Sbjct: 626 DMTKQAYIMLSDCFRYGMNTSCCRAKILVEYFGEDFSHQKCLLCDVCNNGPPQRLNLKEE 685
Query: 412 VFLLMACIHSCKGNWGLNIPI----DILRGSRAKKI------------IDAQYDKLPLHG 455
+L+ I ++ DI S+ +++ I Q+ K
Sbjct: 686 ACILLQTIMLAGNARSYSVDSSDNDDIHFNSKDRRLGERPSLTTLVRSIREQFQKF---- 741
Query: 456 LGKTYPANWWKALGHQLICQGYLKE 480
T WW+ L L +GY++E
Sbjct: 742 --LTTDILWWRGLTRILEAKGYIRE 764
>Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050056-37045638 | 20130731
Length = 614
Score = 186 bits (473), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 136/214 (63%), Gaps = 10/214 (4%)
Query: 5 SSVLKNYFGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIVVSP 64
S +L+ +FGFS + +QK+ RDC+V+ ATGSGKSLC+Q+P L+ K +V+SP
Sbjct: 153 SILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVVVVISP 212
Query: 65 LISLMQDQVMALKERGIKAEYLGSAQKDFTVQTKAEHGQFDILFMTPEKACTISTSFWSN 124
LISLM DQ + L + GI A +LGS Q D TV+ KA G + I+++ PE +
Sbjct: 213 LISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMRGMYSIVYICPETVLRLIQPLQKL 272
Query: 125 LLKAGISLFAVDEAHCISEWGHDFRVEYKNLD---------KLRSVLVEVPFVGLTATAT 175
GI+LFA+DE HC+S+WGHDFR Y L KL+S+ ++P + LTATAT
Sbjct: 273 AETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSLKFDIPMMALTATAT 332
Query: 176 EKVRFDIIKSLKMN-NPYVLVGSFDRANLFYGVK 208
++VR DI+KSL+++ + V++ SF R NL + VK
Sbjct: 333 KRVREDILKSLRLSKDTSVVLTSFFRPNLRFMVK 366
Score = 110 bits (275), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 73/105 (69%)
Query: 234 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 293
TIIY T KD +I+K L ++G+KA Y+ + +H+ F + ++++VATIAFGM
Sbjct: 509 TIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGM 568
Query: 294 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRG 338
GIDK N+R++IHYG P+S+E+YYQE+GR GRDG + C +Y G
Sbjct: 569 GIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCSKFYYTG 613
>Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC |
chr8:34428957-34437037 | 20130731
Length = 917
Score = 181 bits (459), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 206/419 (49%), Gaps = 40/419 (9%)
Query: 7 VLKNYFGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIVVSPLI 66
+LK GF FR Q + + ++++ TG+GKSLCYQ+ L++ +VVSPL+
Sbjct: 267 LLKLIHGFDSFREGQLEAIKNVLAGKSTMLILPTGAGKSLCYQLSALILPGITLVVSPLV 326
Query: 67 SLMQDQVMALKERGIKAEYLGSAQ---KDFTVQTKAEHGQFDILFMTPEKACTISTSFWS 123
+LM DQ+ L I L SAQ + + G +LF++PE+ ++ F S
Sbjct: 327 ALMIDQLRQLPPL-ISGALLSSAQTFEESSETLNQLRQGTIKVLFVSPER--FLNEEFLS 383
Query: 124 NLLKAG--ISLFAVDEAHCISEWGHDFRVEYKNLDK--LRSVLVEVPFVGLTATATEKVR 179
++ G +SL +DEAHCISEW H+FR + L L L + +TATAT
Sbjct: 384 -VISGGLAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKSLNVGSILAMTATATTTTL 442
Query: 180 FDIIKSLKMNNPYVLVGSFDRANLFYGVKPFSRGQSFIDELVREISKEVDSGTSTIIYCT 239
I+ +L + ++ + R NL V D LV S S I+YC
Sbjct: 443 DAIMSALDIPRTNLIQNAHLRDNLCLSVSLIKNRMK--DLLVLMKSSPFAEVKSIIVYCK 500
Query: 240 TIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPN 299
+ +QIS+ L + IKA YH ++ K R LF ++++++VAT+AFGMG+DK +
Sbjct: 501 FQSETDQISRYLNDNNIKAKSYHSGISAKERGYVQELFGSNKIRVVVATVAFGMGLDKRD 560
Query: 300 IRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGDFAKGEFYCGDIKSEIQRRAI 359
+ VIHY P S+E Y QE GR GRDG S C L+Y D + + R++
Sbjct: 561 VGAVIHYSLPGSLEEYVQEIGRAGRDGRLSYCHLFY-------------DDEMYFKLRSL 607
Query: 360 MESLRAAEHYCVLPTCRRKFLLEYFGENFPADR--CGNCDNCL--VAKKERDLSREVFL 414
M S + Y V KFL E FPAD+ CG + + A + D+ EV L
Sbjct: 608 MYS-EGIDEYAV-----NKFL----SEVFPADKSSCGKICSLIKEPASRRFDMKEEVIL 656
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 176/407 (43%), Gaps = 59/407 (14%)
Query: 13 GFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKK----------TGIVV 62
GFS+ P Q RD V + TGSGK+L Y +P ++ + T +V+
Sbjct: 514 GFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFILLRQRRNNSLNGPTVLVL 573
Query: 63 SP---LISLMQDQVM--ALKERGIKAEYLGSAQKDFTVQTKAEHGQFDILFMTPEKACTI 117
+P L + +Q++V A R G A K +Q K DI+ TP + I
Sbjct: 574 APTRELATQIQEEVFKFARSSRVSCTCLYGGAPK--ALQLKELDRGADIVVATPGRLNDI 631
Query: 118 STSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVP----FVGLTAT 173
+ +SL +DEA + + G + ++R ++ E+P + TAT
Sbjct: 632 LE--MKKIDFGQVSLLVLDEADRMLDMGFE--------PQIRKIVNEIPPRRQTLMYTAT 681
Query: 174 ATEKVRFDIIKSLKMNNPYVLVGSFDR--AN----LFYGVKPFSRGQSFIDELVREISKE 227
++VR I L +N V +G+ D AN + V P Q +++++R +
Sbjct: 682 WPKEVR-KIAGDLLVNPVQVNIGNVDELAANKSITQYVEVVPQMEKQRRLEQILRSQER- 739
Query: 228 VDSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVA 287
G+ II+C+T K +Q+++S+ A HG + R+ F + I+VA
Sbjct: 740 ---GSKIIIFCSTKKLCDQLARSIGRT-FGAAAIHGDKSQGERDWVLGQFRTGKSPILVA 795
Query: 288 TIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGDFAKGEFYC 347
T G+D +IR VI+Y P +E Y GR GR G V + +++ D+ +
Sbjct: 796 TDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFSEQDWK----HA 851
Query: 348 GDIKSEIQRRAIMESLRAAEHYCVLPTCRRKFLLEYFGENFPADRCG 394
GD +++ L A + VLP R+ + +F DR G
Sbjct: 852 GD---------LIKVLEGANQH-VLPELRQ--IASRGPPSFGKDRGG 886
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 176/407 (43%), Gaps = 59/407 (14%)
Query: 13 GFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKK----------TGIVV 62
GFS+ P Q RD V + TGSGK+L Y +P ++ + T +V+
Sbjct: 514 GFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFILLRQRRNNSLNGPTVLVL 573
Query: 63 SP---LISLMQDQVM--ALKERGIKAEYLGSAQKDFTVQTKAEHGQFDILFMTPEKACTI 117
+P L + +Q++V A R G A K +Q K DI+ TP + I
Sbjct: 574 APTRELATQIQEEVFKFARSSRVSCTCLYGGAPK--ALQLKELDRGADIVVATPGRLNDI 631
Query: 118 STSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVP----FVGLTAT 173
+ +SL +DEA + + G + ++R ++ E+P + TAT
Sbjct: 632 LE--MKKIDFGQVSLLVLDEADRMLDMGFE--------PQIRKIVNEIPPRRQTLMYTAT 681
Query: 174 ATEKVRFDIIKSLKMNNPYVLVGSFDR--AN----LFYGVKPFSRGQSFIDELVREISKE 227
++VR I L +N V +G+ D AN + V P Q +++++R +
Sbjct: 682 WPKEVR-KIAGDLLVNPVQVNIGNVDELAANKSITQYVEVVPQMEKQRRLEQILRSQER- 739
Query: 228 VDSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVA 287
G+ II+C+T K +Q+++S+ A HG + R+ F + I+VA
Sbjct: 740 ---GSKIIIFCSTKKLCDQLARSIGRT-FGAAAIHGDKSQGERDWVLGQFRTGKSPILVA 795
Query: 288 TIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGDFAKGEFYC 347
T G+D +IR VI+Y P +E Y GR GR G V + +++ D+ +
Sbjct: 796 TDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFSEQDWK----HA 851
Query: 348 GDIKSEIQRRAIMESLRAAEHYCVLPTCRRKFLLEYFGENFPADRCG 394
GD +++ L A + VLP R+ + +F DR G
Sbjct: 852 GD---------LIKVLEGANQH-VLPELRQ--IASRGPPSFGKDRGG 886
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 150/344 (43%), Gaps = 35/344 (10%)
Query: 13 GFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLV-VKKTG---------IVV 62
GFS P Q +D V + TGSGK+L Y +P + +K+T +V+
Sbjct: 183 GFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAKMGPTVLVL 242
Query: 63 SP---LISLMQDQVMAL-KERGIKAEYL-GSAQKDFTVQTKAEHGQFDILFMTPEKACTI 117
SP L + +QD+ + K I L G A K Q K DI+ TP + I
Sbjct: 243 SPTRELATQIQDEAVKFSKTSRIACTCLYGGAPKG--PQLKDIDRGADIVVATPGRLNDI 300
Query: 118 STSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVP----FVGLTAT 173
+L + +S +DEA + + G + ++R ++ VP + TAT
Sbjct: 301 LEMRRISLHQ--VSYLVLDEADRMLDMGFE--------PQIRKIVNGVPARRQTLMFTAT 350
Query: 174 ATEKVRFDIIKSLKMNNPYVLVGSFDRANLFYGVKPFSRGQSFIDELVR--EISKEVDSG 231
++VR I L +N V +G+ D + +++++ R I + D G
Sbjct: 351 WPKEVRR-IAADLLVNPVQVNIGNVDELVANKSITQHIEVLTYVEKQRRLETILRSQDQG 409
Query: 232 TSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAF 291
+ II+C+T K +Q++++LT A HG + R+ F ++VAT
Sbjct: 410 SKIIIFCSTKKMCDQLARNLTRQ-FGAAAIHGDKSQADRDHVLNQFRSGRTPVLVATDVA 468
Query: 292 GMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYY 335
G+D +IR V+++ P +E Y GR GR G + + ++
Sbjct: 469 ARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFF 512
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 150/344 (43%), Gaps = 35/344 (10%)
Query: 13 GFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLV-VKKTG---------IVV 62
GFS P Q +D V + TGSGK+L Y +P + +K+T +V+
Sbjct: 183 GFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAKMGPTVLVL 242
Query: 63 SP---LISLMQDQVMAL-KERGIKAEYL-GSAQKDFTVQTKAEHGQFDILFMTPEKACTI 117
SP L + +QD+ + K I L G A K Q K DI+ TP + I
Sbjct: 243 SPTRELATQIQDEAVKFSKTSRIACTCLYGGAPKG--PQLKDIDRGADIVVATPGRLNDI 300
Query: 118 STSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVP----FVGLTAT 173
+L + +S +DEA + + G + ++R ++ VP + TAT
Sbjct: 301 LEMRRISLHQ--VSYLVLDEADRMLDMGFE--------PQIRKIVNGVPARRQTLMFTAT 350
Query: 174 ATEKVRFDIIKSLKMNNPYVLVGSFDRANLFYGVKPFSRGQSFIDELVR--EISKEVDSG 231
++VR I L +N V +G+ D + +++++ R I + D G
Sbjct: 351 WPKEVRR-IAADLLVNPVQVNIGNVDELVANKSITQHIEVLTYVEKQRRLETILRSQDQG 409
Query: 232 TSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAF 291
+ II+C+T K +Q++++LT A HG + R+ F ++VAT
Sbjct: 410 SKIIIFCSTKKMCDQLARNLTRQ-FGAAAIHGDKSQADRDHVLNQFRSGRTPVLVATDVA 468
Query: 292 GMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYY 335
G+D +IR V+++ P +E Y GR GR G + + ++
Sbjct: 469 ARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFF 512
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 157/352 (44%), Gaps = 34/352 (9%)
Query: 13 GFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIVVSP-----LIS 67
GF + P Q RD + + TGSGK+L Y +P +V ++ P ++
Sbjct: 114 GFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLV 173
Query: 68 LMQDQVMALKERGIKAEYLGSAQKDFTV---------QTKAEHGQFDILFMTPEKACTIS 118
L + +A++ + ++ S++ T Q + +I+ TP + +
Sbjct: 174 LAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDML 233
Query: 119 TSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATATEKV 178
S +NL + ++ +DEA + + G D ++ K + ++R L +AT
Sbjct: 234 ESNHTNLRR--VTYLVLDEADRMLDMGFDPQIR-KIVSQIRPDRQT-----LYWSATWPK 285
Query: 179 RFDIIKSLKMNNPY-VLVGSFD-RANLFYGVKPF----SRGQSFIDELVREISKEVDSGT 232
+ + + NPY V++GS D +AN + +K + Q + D+LV+ + +D G+
Sbjct: 286 EVEQLARQFLYNPYKVIIGSEDLKAN--HAIKQYVDIVPEKQKY-DKLVKLLEDIMD-GS 341
Query: 233 STIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFG 292
+I+ T K +QI++ L G A HG + R+ F + IM AT
Sbjct: 342 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAA 401
Query: 293 MGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGD--FAK 342
G+D +++ VI+Y P S+E Y GR GR G + ++T + FAK
Sbjct: 402 RGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAK 453
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 152/357 (42%), Gaps = 50/357 (14%)
Query: 12 FGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVP--------PLVVKKTG---I 60
GF + P Q RD + + TGSGK+L Y +P P +V+ G +
Sbjct: 219 LGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVL 278
Query: 61 VVSPLISL---MQDQVMALKER-GIKAEYL-GSAQKDFTVQTKAEHGQFDILFMTPEKAC 115
V++P L +Q + M R I+ + G A K Q + +I+ TP +
Sbjct: 279 VLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKG--PQIRDLRMGVEIVIATPGRLI 336
Query: 116 TISTSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATAT 175
+ + +NL + ++ +DEA + + G + ++ K ++++R L +AT
Sbjct: 337 DMLEAQHTNLQR--VTYLVLDEADRMLDMGFEPQIR-KIVNQIRPDRQT-----LYWSAT 388
Query: 176 EKVRFDIIKSLKMNNPY-VLVGSFDRANLFYGVKPFSRGQSFIDELVREIS--------- 225
+ + ++NPY V++GS P+ + I+++V ++
Sbjct: 389 WPKEVESLARQFLHNPYKVVIGS-----------PYLKANQSINQVVEVVTDMEKYNRLI 437
Query: 226 ---KEVDSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEV 282
KEV G+ +I+ T K +Q+++ L G A HG N R+ F
Sbjct: 438 KLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRS 497
Query: 283 QIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGD 339
IM AT G+D +I+ V++Y P S+E Y GR GR G + ++T +
Sbjct: 498 PIMTATDVAARGLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGAKGTAYSFFTSAN 554
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 147/415 (35%), Gaps = 128/415 (30%)
Query: 12 FGFSDFRPYQKD-XXXXXXXXRDCVVVMATGSGKSLCYQVPPLV---------------- 54
GF + P QK +D + TGSGK+L + +P L
Sbjct: 180 LGFKEPTPIQKACVPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKAESISGVN 239
Query: 55 -------VKKTGIVVSPLISLMQDQVMALKERGIKAEYLGSAQKDFTVQTKAEHG----- 102
TG++ S +I+ ++ + + A++L + K V+ A G
Sbjct: 240 GEEAAEKYATTGLLRSLIIAPTRELALQV------AKHLKAVAKHINVRVTAIVGGILPE 293
Query: 103 -QFDILFMTPEKACTISTSFWSNLLKAG---------ISLFAVDEAHCISEWGH------ 146
Q +L PE W L+ +G +S F +DEA + + GH
Sbjct: 294 KQERLLKARPEIVVATPGRLWE-LMSSGEKHLIELHSLSFFVLDEADRMVQSGHFKELQS 352
Query: 147 --------DFRVEYKNLD------------KLRSVLVEVPFVGLTATATEKVR------- 179
+ E + D K R LV V L+A +K++
Sbjct: 353 IIDMLPMSNISSEDNSKDAQNCVTVSSIQKKKRQTLVFSATVALSADFRKKLKRGSIQKK 412
Query: 180 ------FDIIKSLK-------------MNNPYVLVGSFDR-----------ANLFYGVKP 209
D I++L + NP +L + A+L+Y +
Sbjct: 413 QLSTDGLDSIETLSERAGMRPNAAIIDLTNPSILAAKIEESFIECTEDDKDAHLYYILTV 472
Query: 210 FSRGQSFIDELVREISKEVDSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKS 269
+G+ TI++CT+I + IS L G+ H QM ++
Sbjct: 473 HGQGR-------------------TIVFCTSIAALRHISSILRILGVNVWTLHAQMQQRA 513
Query: 270 REESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGR 324
R ++ F ++ I+VAT G+D P +R V+HY P S E Y SGR R
Sbjct: 514 RLKAMDRFRENDNGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTAR 568
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 147/344 (42%), Gaps = 31/344 (9%)
Query: 13 GFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPL--VVK---KTGIVVSPLIS 67
G + P Q+ RD + TG+GK+L + +P + +++ K G PL
Sbjct: 99 GITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGKDPLAL 158
Query: 68 LMQDQVMALKERGIKAEYLGSAQKDFTV----------QTKAEHGQFDILFMTPEKACTI 117
++ K+ ++ E+ +A T+ Q + DI TP + +
Sbjct: 159 VLAPTRELAKQ--VEKEFYEAAPNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRIIDL 216
Query: 118 STSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATATEK 177
NL + + +DEA + + G VE K L++L + + F T ++
Sbjct: 217 LNRGALNLKE--VQFVILDEADQMLQVGFQEDVE-KILERLPAERQTLMFSATMPTWIKQ 273
Query: 178 VRFDIIKSLKMNNPYV--LVGSFDRANLFYGVKPFS-RGQSFIDE-LVREISKEVDSGTS 233
+ + +K NP LVG D+ L G+ +S +++ ++ + KE G
Sbjct: 274 LTRNYLK-----NPLTIDLVGDSDQ-KLADGISLYSILSDAYVKAGIIVPLIKEHAKGGK 327
Query: 234 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 293
I++ T +D ++IS ++++ I HG ++ RE + F ++VAT
Sbjct: 328 CIVFTQTKRDADRISHGMSKS-IPCEALHGDISQIQRERTLAGFRNGHFNVLVATDVASR 386
Query: 294 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTR 337
G+D PN+ VIHY P + E + SGR GR G L YT+
Sbjct: 387 GLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVYTQ 430
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 142/348 (40%), Gaps = 41/348 (11%)
Query: 13 GFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPL--VVK---KTG-------I 60
G + P Q+ RD + TG+GK+L + +P L ++K K G +
Sbjct: 108 GIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNAKNGKRRDPLAL 167
Query: 61 VVSPLISLMQDQVMALKERGIKAEYLGSAQKDFTVQTKAEH--GQFDILFMTPEKACTIS 118
V++P L + K+ E + S +Q + DI+ TP +
Sbjct: 168 VLAPTRELARQVEKEFKDAAPNLEII-SLYGGMPIQQQISKLGSGVDIVVGTPGRVI--- 223
Query: 119 TSFWSNLLKAG------ISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTA 172
+LLK G ++ +DEA + + G VE L KL S + F
Sbjct: 224 -----DLLKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETI-LQKLPSKRQTLMF----- 272
Query: 173 TATEKVRFDIIKSLKMNNPYV--LVGSFDRANLFYGVKPFSRGQSFIDE--LVREISKEV 228
+AT + +N P LVG D+ L G+ +S + + ++ + E
Sbjct: 273 SATMPSWIKNLTRNYLNKPLTIDLVGDSDQ-KLADGISLYSIASNAYSKAGILVPLITEH 331
Query: 229 DSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVAT 288
G I++ T +D +++S + ++ IK HG ++ RE + F ++VAT
Sbjct: 332 AKGGKCIVFTQTKRDADRLSHIMAKS-IKCEALHGDISQTQRERTLTGFRNSYFNVLVAT 390
Query: 289 IAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYT 336
G+D PN+ VIHY P + E + SGR GR G L +T
Sbjct: 391 DVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHT 438
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 143/368 (38%), Gaps = 56/368 (15%)
Query: 13 GFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCY---------QVPPLVVKKTG---- 59
G+ P Q RD + V TGSGK+ + ++PP+ +
Sbjct: 305 GYKTPSPIQMAAIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPY 364
Query: 60 -IVVSPLISLMQDQVMALKERGIK-AEYLGSAQKDFTVQTKAEHGQFDILFMTPEKACTI 117
+V++P L Q +++ +K A+Y+G E F I + C I
Sbjct: 365 AVVMAPTRELAQQ----IEDETVKFAQYMGIKVVSIVGGQSIEEQGFKI-----RQGCEI 415
Query: 118 STSFWSNLLKAGISLFAV---------DEAHCISEWGHDFRV----------------EY 152
+ L+ +AV DEA + + G + +V E
Sbjct: 416 VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENED 475
Query: 153 KNLDKLRSVLVEVPFVGLTATATEKVRFDIIKSLKMNNPYVL-VGSFDRANLFYGVKPFS 211
+ LD+ R F A E++ ++ NP V+ +G+ +A
Sbjct: 476 EELDEKRIYRTTYMFSATMPPAVERLARKYLR-----NPVVVTIGTAGKATDLISQHVIM 530
Query: 212 RGQSFIDELVREISKEVDSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSRE 271
+S + ++ + E++ T+ I++ T K + ++K+L + G + HG + RE
Sbjct: 531 MKESEKNYKLQRLLDELNDKTA-IVFVNTKKSADFLAKNLDKEGYRVTTLHGGKSQDQRE 589
Query: 272 ESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVC 331
S F ++VAT G GID P++ VI+Y P +IE Y GR GR G V
Sbjct: 590 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 649
Query: 332 WLYYTRGD 339
+ T D
Sbjct: 650 TTFLTLQD 657
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 143/349 (40%), Gaps = 43/349 (12%)
Query: 13 GFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPL--VVK---KTG-------I 60
G + P Q+ RD + TG+GK+L + +P L ++K K G +
Sbjct: 108 GIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNAKNGKRRDPLAL 167
Query: 61 VVSPLISLMQDQVMALKERGIKAEYLGSAQKDFTVQTKAEH--GQFDILFMTPEKACTIS 118
V++P L + K+ E + S +Q + DI+ TP +
Sbjct: 168 VLAPTRELARQVEKEFKDAAPNLEII-SLYGGMPIQQQISKLGSGVDIVVGTPGRVI--- 223
Query: 119 TSFWSNLLKAG------ISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTA 172
+LLK G ++ +DEA + + G VE L KL S + F
Sbjct: 224 -----DLLKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETI-LQKLPSKRQTLMF----- 272
Query: 173 TATEKVRFDIIKSLKMNNPYV--LVGSFDRANLFYGVKPFSRGQSFIDE---LVREISKE 227
+AT + +N P LVG D+ L G+ +S + + LV I++
Sbjct: 273 SATMPSWIKNLTRNYLNKPLTIDLVGDSDQ-KLADGISLYSIASNAYSKAGILVPLITEH 331
Query: 228 VDSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVA 287
G I++ T +D +++S + ++ IK HG ++ RE + F ++VA
Sbjct: 332 AKGG-KCIVFTQTKRDADRLSHIMAKS-IKCEALHGDISQTQRERTLTGFRNSYFNVLVA 389
Query: 288 TIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYT 336
T G+D PN+ VIHY P + E + SGR GR G L +T
Sbjct: 390 TDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHT 438
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 144/355 (40%), Gaps = 42/355 (11%)
Query: 2 DAMSSVLKNYFGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVP---------- 51
D + +LK G P Q RD + + TGSGK+L + +P
Sbjct: 155 DPILKMLKTK-GIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEI 213
Query: 52 --PLVVKKT--GIVVSPLISL-------MQDQVMALKERGIKA--EYLGSAQKDFTVQTK 98
P+V + G+++ P L ++ ++ LKE G L D Q K
Sbjct: 214 RMPIVPGEGPFGLIICPSWELARQTYEVIEQFLLPLKEAGYPELRPLLCIGGIDMRSQLK 273
Query: 99 AEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISEWG--HDFRVEYKNLD 156
I+ TP + + NL +DEA + + G D R + +
Sbjct: 274 IVKKGVHIVVATPGRLKDMLAKKKMNL--DNCRYLTLDEADRLVDPGFEDDIREVFDHFK 331
Query: 157 KLRSVLVEVPFVGLTATATEKVRFDIIKSLKMNNPYVLVGSFDRANL-FYGVKPFSRGQS 215
R L+ +AT K++ + +S + V VG ANL + + ++
Sbjct: 332 AQRQTLL------FSATMPTKIQ-NFARSALVKPIIVNVGRAGAANLDVIQEVEYVKQEA 384
Query: 216 FIDELVREISKEVDSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHR 275
I L+ + K + +I+C DV+ I + L G++A HG + + RE +
Sbjct: 385 KIVYLLECLQK---TPPPVLIFCENKADVDNIHEYLLLKGVEAVAIHGDKDQEDREYAIS 441
Query: 276 LFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQ---ESGRCGRDGI 327
F + ++VAT G+D P+I+ VI+Y P IE+Y +GRCG+ GI
Sbjct: 442 SFKTGKKDVLVATDIASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGI 496
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 144/355 (40%), Gaps = 42/355 (11%)
Query: 2 DAMSSVLKNYFGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIV 61
D + +LK G P Q RD + + TGSGK+L + +P +++ +
Sbjct: 153 DPILKMLKTK-GIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEI 211
Query: 62 VSPLI---------------------SLMQDQVMALKERGIKA--EYLGSAQKDFTVQTK 98
+ P++ ++++ ++ LKE G L D Q +
Sbjct: 212 MMPIVPGEGPFGLIICPSRELARQTYEVIEEFLLPLKEAGYPELRPLLCIGGIDMRSQLE 271
Query: 99 AEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFAVDEAHCISEWG--HDFRVEYKNLD 156
I+ TP + + NL +DEA + + G D R + +
Sbjct: 272 IVKKGVHIVVATPGRLKDMLAKKKMNL--DNCRYLTLDEADRLVDLGFEDDIREVFDHFK 329
Query: 157 KLRSVLVEVPFVGLTATATEKVRFDIIKSLKMNNPYVLVGSFDRANL-FYGVKPFSRGQS 215
R L+ +AT K++ + +S + V VG ANL + + ++
Sbjct: 330 AQRQTLL------FSATMPTKIQ-NFARSALVKPIIVNVGRAGAANLDVIQEVEYVKQEA 382
Query: 216 FIDELVREISKEVDSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHR 275
I L+ + K + +I+C DV+ I + L G++A HG + + RE +
Sbjct: 383 KIVYLLECLQK---TPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAIS 439
Query: 276 LFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQ---ESGRCGRDGI 327
F + ++VAT G+D P+I+ VI+Y P IE+Y +GRCG+ GI
Sbjct: 440 SFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGI 494
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 148/373 (39%), Gaps = 70/373 (18%)
Query: 6 SVLKNYFGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLV-----VKKTG- 59
+VL+ GF P Q RD + + ATGSGK+L + +P ++ K G
Sbjct: 113 NVLECCKGFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAIMHVMNKRKSKGS 172
Query: 60 --------IVVSPLISLMQDQVMAL----KERGIKAEYL-GSAQKDFTVQTKAEHGQFDI 106
+++SP L Q L K G+++ L G K Q A DI
Sbjct: 173 SKGRNPLCLMLSPTRELAQQISDVLCDAGKSCGVESVCLYGGTPK--GAQISALKSGIDI 230
Query: 107 LFMTPEKACTISTSFWSNLLKAGI------SLFAVDEAHCISEWGHDFRVEYKNLDKLRS 160
+ TP + +L++ GI S +DEA + + G + V RS
Sbjct: 231 VIGTPGRI--------QDLVEMGICRLQEVSFVVLDEADRMLDMGFEQIV--------RS 274
Query: 161 VLVEVPFVGLTATATEKVRFDIIKSLKMN---------NPY-VLVGSFDRANLFYGVKPF 210
+L G T +A + V F L ++ NP V+VGS D
Sbjct: 275 IL------GQTCSARQMVMFSATWPLAVHHLAQEFMDPNPVKVVVGSED----LSANHDV 324
Query: 211 SRGQSFIDELVRE------ISKEVDSGTSTIIYCTTIK-DVEQISKSLTEAGIKAGMYHG 263
+ +DE +R+ + K S + ++ K + ++ K L + G KA G
Sbjct: 325 MQIVEVLDERLRDKRLLALLEKYHKSQKNRVLVFVLYKWETTRVEKMLQQGGWKAVSISG 384
Query: 264 QMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCG 323
+ R ++ LF +M+AT G+D P++ VI++ P ++E Y GR G
Sbjct: 385 DKSQHERTKALSLFKNGSCPLMIATDVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTG 444
Query: 324 RDGIPSVCWLYYT 336
R G V ++T
Sbjct: 445 RAGKKGVAHTFFT 457
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 130/327 (39%), Gaps = 26/327 (7%)
Query: 13 GFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQ 72
GF P Q++ D + G+GK+ + +P L + ++ L+ +
Sbjct: 161 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQVVILVPTR 220
Query: 73 VMALKERGIKAEYLGSAQKDFTVQTKAEHGQFDIL-FMTPEKACTISTSFWSNLLKAGI- 130
+AL+ + E Q V T + DI+ P + +L K G+
Sbjct: 221 ELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVC 280
Query: 131 -----SLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATATEKVRFDIIKS 185
S+ +DEA + +F+ + L + ++ L +AT V K
Sbjct: 281 VLKDCSMLVMDEADKL--LSPEFQPSIEQLIQFLPPTRQI----LMFSATFPVTVKDFKD 334
Query: 186 LKMNNPYVLVGSFDRANLFYGVKPFSRGQSFIDELVREISKEVDSGTS------TIIYCT 239
+ PY+ + D L K ++ +F++E R+ +++ S +II+C
Sbjct: 335 RYLRKPYI-INLMDELTL----KGITQFYAFVEE--RQKVHCLNTLFSKLQINQSIIFCN 387
Query: 240 TIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPN 299
++ VE ++K +TE G H +M R F + +V T F GID
Sbjct: 388 SVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQA 447
Query: 300 IRKVIHYGCPKSIESYYQESGRCGRDG 326
+ VI++ PK+ E+Y GR GR G
Sbjct: 448 VNVVINFDFPKNSETYLHRVGRSGRFG 474
>Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:18030127-18021965 | 20130731
Length = 747
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 150/378 (39%), Gaps = 47/378 (12%)
Query: 12 FGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPL---VVKKTGIVVSPLISL 68
G++ P Q RD TGSGK+ + +P L + + G+ ++ L
Sbjct: 158 LGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKGVHAIRVLIL 217
Query: 69 MQDQVMALKERGIKAEYLGSAQKDFT-------VQTKAEHGQF----DILFMTPEKACT- 116
+ +A++ + E L + V TK + DI+ TP +
Sbjct: 218 TPTRELAVQVHSM-IEELAKFTDNIRCCLIVGGVPTKGQEAALRSRPDIVVATPGRMIDH 276
Query: 117 ISTSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATATE 176
+ S +L +++ +DEA + E G F E + L +R + + +AT TE
Sbjct: 277 LRNSMSVDL--DDLAVLILDEADRLLELG--FSAEIQEL--VRVCPKKRQTMLFSATMTE 330
Query: 177 KVRFDIIKSLKMNNPYVLVGSFDRANLFYGVKPFSRGQSFIDELVR-----EISKEV--- 228
+V D+IK L ++ P L R S +E+VR E++ E
Sbjct: 331 EVD-DLIK-LSLSKPVRLSAD----------PSAKRPASLTEEVVRIRRMREVNHEAVLL 378
Query: 229 -----DSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQ 283
+ II+ T + ++ +G+KA HG + R ++ F + +V
Sbjct: 379 AMCTKTFTSKVIIFSGTKQAAHRLRIIFGLSGLKAAELHGNLTQAQRLDALEQFRKQQVD 438
Query: 284 IMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGDFAKG 343
+VAT G+D ++ VI++ CP+ + SY GR R G + T D +
Sbjct: 439 FLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVTDSDRSLL 498
Query: 344 EFYCGDIKSEIQRRAIME 361
+ S+++ R + E
Sbjct: 499 KAIAKRAGSKLKSRIVAE 516
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 130/327 (39%), Gaps = 26/327 (7%)
Query: 13 GFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQ 72
GF P Q++ D + G+GK+ + +P L + ++ L+ +
Sbjct: 159 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQVVILVPTR 218
Query: 73 VMALKERGIKAEYLGSAQKDFTVQTKAEHGQFDIL-FMTPEKACTISTSFWSNLLKAGI- 130
+AL+ + E Q V T + DI+ P + +L K G+
Sbjct: 219 ELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVC 278
Query: 131 -----SLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATATEKVRFDIIKS 185
S+ +DEA + +F+ + L + ++ L +AT V K
Sbjct: 279 VLKDCSMLVMDEADKL--LSPEFQPSIEQLIQFLPPTRQI----LMFSATFPVTVKDFKD 332
Query: 186 LKMNNPYVLVGSFDRANLFYGVKPFSRGQSFIDELVREISKEVDSGTS------TIIYCT 239
+ PY+ + D L K ++ +F++E R+ +++ S +II+C
Sbjct: 333 RYLRKPYI-INLMDELTL----KGITQFYAFVEE--RQKVHCLNTLFSKLQINQSIIFCN 385
Query: 240 TIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPN 299
++ VE ++K +TE G H +M R F + +V T F GID
Sbjct: 386 SVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQA 445
Query: 300 IRKVIHYGCPKSIESYYQESGRCGRDG 326
+ VI++ PK+ E+Y GR GR G
Sbjct: 446 VNVVINFDFPKNSETYLHRVGRSGRFG 472
>Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:19680414-19670656 | 20130731
Length = 760
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 147/358 (41%), Gaps = 52/358 (14%)
Query: 12 FGFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPL---------VVKKTGIVV 62
G+S P Q RD TGSGK+ + +P L V +++
Sbjct: 169 LGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKRVHAIRVLIL 228
Query: 63 SP---LISLMQDQVMALKE-RGIKAEYL--GSAQKDFTVQTKAEHGQFDILFMTPEKACT 116
+P L + +Q + +L + I+ + G + K+ Q A + DI+ TP +
Sbjct: 229 TPTRELAAQVQSMIKSLSQFTDIRCCLIVGGLSTKE---QEVALRSRPDIVVATPGRMID 285
Query: 117 -ISTSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATAT 175
+ S +L +S+ +DEA + E G F E + L +R + + +AT T
Sbjct: 286 HLRNSMSVDL--DDLSVLILDEADRLLELG--FSAEIQEL--VRVCPKKRQTMLFSATMT 339
Query: 176 EKVRFDIIKSLKMNNPYVLVGSFDRANLFYGVKPFS-RGQSFIDELVR-----EISKEV- 228
E+V D+IK L ++ P L P + R S +E+VR E+++E
Sbjct: 340 EEVD-DLIK-LSLSKP-----------LRLSADPLAKRPASLTEEVVRLRRMREVNQEAV 386
Query: 229 -------DSGTSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDE 281
+ II+ T + ++ +G+KA HG + R + F + +
Sbjct: 387 LLAMCSKTFTSKVIIFSGTKQAAHRLRIIFGLSGLKAAELHGNLTQAQRLGALEEFRKQQ 446
Query: 282 VQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGD 339
V +VAT G+D ++ VI++ CP+ + SY GR R G + T D
Sbjct: 447 VDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVTDND 504
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 141/343 (41%), Gaps = 48/343 (13%)
Query: 13 GFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLV-------------VKKTG 59
G+ P Q ++ +V+ TGSGKS + +P + K
Sbjct: 158 GYEMPTPVQMQAIPAALVGKNMLVLADTGSGKSASFLIPIISRCASHRLMYVSDNKKPLA 217
Query: 60 IVVSPL--ISLMQDQVMALKERGI---KAEYLGS---AQKDFTVQTKAEHGQFDILFMTP 111
+V++P +S+ ++ L +G+ A +G A++ + +Q E ++ TP
Sbjct: 218 MVLTPTRELSIQVEEHAKLLGKGLPFKTALVVGGDAMARQLYRIQQGVE-----LIVGTP 272
Query: 112 EKACTISTSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEV--PFVG 169
+ + T +L ++ F VDE C+ + G FR D++ + + P V
Sbjct: 273 GRLVDLLTKNEIDL--DDVTTFVVDEVDCMLQRG--FR------DQVLQIFTALSQPQVL 322
Query: 170 LTATATEKVRFDIIKSLKMNNPYVLVGSFDRAN-----LFYGVKPFSRGQSFIDELVREI 224
+ + T + S+ + + VG +R N L V+ + Q D L
Sbjct: 323 MYSATTSDSLEKMANSMAKDTVVITVGEPNRPNKAVKQLAIWVESKQKKQKLFDIL---- 378
Query: 225 SKEVDSGTSTIIYCTTIKDVEQISKSLT-EAGIKAGMYHGQMNGKSREESHRLFVRDEVQ 283
+ +IY + + ++ ++T G+KA HG+ + R E + F+ E
Sbjct: 379 KSQKHFKPPVVIYVGSRLGADLLANAITVSTGVKAVSIHGEKSMTERREIMQSFMVGEFP 438
Query: 284 IMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDG 326
++VAT G G+D +R+VI + P SI Y + GR R G
Sbjct: 439 VVVATGVLGRGVDLLGVRQVIVFDMPNSINEYVHQIGRASRMG 481
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Query: 216 FIDELVREISKEVDSGTS---TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREE 272
+D LV E S+ G TI++ ++++++L G+ A HG + RE
Sbjct: 351 LLDLLVEEASQAEKCGHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREA 410
Query: 273 SHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCW 332
+ F I+VAT G+D + VI+ PK+ E Y GR GR G +
Sbjct: 411 ALHDFRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIAT 470
Query: 333 LYYTRGDFAKGEFYCGDIKSEI 354
+YT D F +I+ I
Sbjct: 471 SFYTDRDM----FLVSNIRKAI 488
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Query: 216 FIDELVREISKEVDSGTS---TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREE 272
+D LV E S+ G TI++ ++++++L G+ A HG + RE
Sbjct: 320 LLDLLVEEASQAEKCGHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREA 379
Query: 273 SHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCW 332
+ F I+VAT G+D + VI+ PK+ E Y GR GR G +
Sbjct: 380 ALHDFRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIAT 439
Query: 333 LYYTRGDFAKGEFYCGDIKSEI 354
+YT D F +I+ I
Sbjct: 440 SFYTDRDM----FLVSNIRKAI 457
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 129/327 (39%), Gaps = 26/327 (7%)
Query: 13 GFSDFRPYQKDXXXXXXXXRDCVVVMATGSGKSLCYQVPPLVVKKTGIVVSPLISLMQDQ 72
GF P Q++ D + G+GK+ + +P L V ++ L+ +
Sbjct: 168 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDKNVIQVVILVPTR 227
Query: 73 VMALKERGIKAEYLGSAQKDFTVQTKAEHGQFDIL-FMTPEKACTISTSFWSNLLKAGI- 130
+AL+ + E Q V T + DI+ P + +L K G+
Sbjct: 228 ELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVC 287
Query: 131 -----SLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATATEKVRFDIIKS 185
S+ +DEA + +F+ + L + ++ L +AT V
Sbjct: 288 VLKDCSMLVMDEADKL--LSPEFKPSIEQLIQFLPSNRQI----LLFSATFPVTVKDFND 341
Query: 186 LKMNNPYVLVGSFDRANLFYGVKPFSRGQSFIDELVREISKEVDSGTS------TIIYCT 239
+ PY+ + D L K ++ +F++E R+ +++ S +II+C
Sbjct: 342 RYLRKPYI-INLMDELTL----KGITQFYAFVEE--RQKVHCLNTLFSKLQINQSIIFCN 394
Query: 240 TIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPN 299
++ VE ++K +TE G H +M R F + +V T F GID
Sbjct: 395 SVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQA 454
Query: 300 IRKVIHYGCPKSIESYYQESGRCGRDG 326
+ VI++ PK+ E+Y GR GR G
Sbjct: 455 VNVVINFDFPKNSETYLHRVGRSGRFG 481
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 233 STIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFG 292
+ I++ T K + ++K+L G + HG + RE S F ++VAT G
Sbjct: 513 TAIVFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAG 570
Query: 293 MGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGD 339
GID P++ VI+Y P +IE Y GR GR G V + T D
Sbjct: 571 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQD 617
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 233 STIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFG 292
+ I++ T K + ++K+L G + HG + RE S F ++VAT G
Sbjct: 513 TAIVFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAG 570
Query: 293 MGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGD 339
GID P++ VI+Y P +IE Y GR GR G V + T D
Sbjct: 571 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQD 617
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 233 STIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFG 292
+ I++ T K + ++K+L G + HG + RE S F ++VAT G
Sbjct: 513 TAIVFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAG 570
Query: 293 MGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRGD 339
GID P++ VI+Y P +IE Y GR GR G V + T D
Sbjct: 571 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQD 617
>Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:23756195-23750953 | 20130731
Length = 608
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%)
Query: 234 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 293
T+++ T K + + L G A HG + RE++ R F I+VAT
Sbjct: 415 TLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREQALRSFKTGNTPILVATDVAAR 474
Query: 294 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDG 326
G+D P + V+++ P I+ Y GR GR G
Sbjct: 475 GLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAG 507
>Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768711-37774877 | 20130731
Length = 613
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 136/370 (36%), Gaps = 75/370 (20%)
Query: 19 PYQKDXXXXXXXXRDCVVVMATGSGKSLCY--------------QVPPLVVKKT---GIV 61
P Q+ RD + TGSGK+ + Q PP V+ +V
Sbjct: 169 PVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALV 228
Query: 62 VSPLISL-MQDQVMALK---ERGIKA--EYLGSAQKDFTVQTKAEHGQFDILFMTPEKAC 115
+SP L MQ A K + G++ Y G+ Q + DIL TP +
Sbjct: 229 LSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAP---INQQLRELERGVDILVATPGRLV 285
Query: 116 TISTSFWSNLLKAGISL-----FAVDEAHCISEWGHDFRVEYKNLDKLRSVL--VEVPFV 168
+ L +A +SL A+DEA + + G + ++R ++ +++P
Sbjct: 286 DL-------LERARVSLSMIRYLALDEADRMLDMGFE--------PQIRKIVEQMDMPPA 330
Query: 169 GLTATATEKVRFDIIKSLKMNNPYVLVGSFDRANLFYGVKPFSRGQSFIDELVREISKEV 228
G+ T F K ++ L F +F V ID+ V E +E
Sbjct: 331 GVRQTMLFSATFP--KEIQR-----LASDFLSNYIFLAVGRVGSSTDLIDQRV-EYVQES 382
Query: 229 DSGTS-------------------TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKS 269
D + T+++ T K + + L A HG + +
Sbjct: 383 DKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQE 442
Query: 270 REESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPS 329
RE + R F I+VAT G+D P++ V+++ P I+ Y GR GR G
Sbjct: 443 REAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKG 502
Query: 330 VCWLYYTRGD 339
+ ++ +
Sbjct: 503 LATAFFNENN 512
>Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768655-37774862 | 20130731
Length = 613
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 136/370 (36%), Gaps = 75/370 (20%)
Query: 19 PYQKDXXXXXXXXRDCVVVMATGSGKSLCY--------------QVPPLVVKKT---GIV 61
P Q+ RD + TGSGK+ + Q PP V+ +V
Sbjct: 169 PVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALV 228
Query: 62 VSPLISL-MQDQVMALK---ERGIKA--EYLGSAQKDFTVQTKAEHGQFDILFMTPEKAC 115
+SP L MQ A K + G++ Y G+ Q + DIL TP +
Sbjct: 229 LSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAP---INQQLRELERGVDILVATPGRLV 285
Query: 116 TISTSFWSNLLKAGISL-----FAVDEAHCISEWGHDFRVEYKNLDKLRSVL--VEVPFV 168
+ L +A +SL A+DEA + + G + ++R ++ +++P
Sbjct: 286 DL-------LERARVSLSMIRYLALDEADRMLDMGFE--------PQIRKIVEQMDMPPA 330
Query: 169 GLTATATEKVRFDIIKSLKMNNPYVLVGSFDRANLFYGVKPFSRGQSFIDELVREISKEV 228
G+ T F K ++ L F +F V ID+ V E +E
Sbjct: 331 GVRQTMLFSATFP--KEIQR-----LASDFLSNYIFLAVGRVGSSTDLIDQRV-EYVQES 382
Query: 229 DSGTS-------------------TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKS 269
D + T+++ T K + + L A HG + +
Sbjct: 383 DKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQE 442
Query: 270 REESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPS 329
RE + R F I+VAT G+D P++ V+++ P I+ Y GR GR G
Sbjct: 443 REAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKG 502
Query: 330 VCWLYYTRGD 339
+ ++ +
Sbjct: 503 LATAFFNENN 512
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%)
Query: 234 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 293
T+++ T K + + L A HG RE + R F R IMVAT
Sbjct: 404 TLVFVETKKGADALENWLCRINFPAIAIHGDKVQMERERALRSFKRGLTPIMVATDVASR 463
Query: 294 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYT 336
G+D P++ VI++ P+ I+ Y GR GR G + +++
Sbjct: 464 GLDIPHVAHVINFDLPRDIDDYVHRIGRTGRAGQSGLATAFFS 506
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%)
Query: 232 TSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAF 291
+I+ ++ ++ K L E + H M+ + R + ++ F +I+VAT
Sbjct: 289 NQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLV 348
Query: 292 GMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYT 336
G GID + VI+Y P S ++Y GR GR G + + +
Sbjct: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%)
Query: 232 TSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAF 291
+I+ ++ ++ + L E + H M+ + R + +R F +I+VAT
Sbjct: 289 NQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHSRILVATDLV 348
Query: 292 GMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYT 336
G GID + VI+Y P S ++Y GR GR G + + +
Sbjct: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%)
Query: 232 TSTIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAF 291
+I+ ++ ++ + L E + H M+ + R + +R F +I+VAT
Sbjct: 289 NQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHSRILVATDLV 348
Query: 292 GMGIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYT 336
G GID + VI+Y P S ++Y GR GR G + + +
Sbjct: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%)
Query: 234 TIIYCTTIKDVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGM 293
+I+ ++ +++K L E + H M+ + R + ++ F + +I+VAT G
Sbjct: 368 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGR 427
Query: 294 GIDKPNIRKVIHYGCPKSIESYYQESGRCGRDGIPSVCWLYYT 336
GID + VI+Y P S ++Y GR GR G + + +
Sbjct: 428 GIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 470
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 137/315 (43%), Gaps = 32/315 (10%)
Query: 32 RDCVVVMATGSGKSLCYQVPPLV-------VKK----TGIVVSPLISLMQDQVMALKE-- 78
RD + + TGSGK+ + +P +V ++K G++ +P L + K+
Sbjct: 269 RDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKFA 328
Query: 79 --RGIK--AEYLGSAQKDFTVQTKAEHGQFDILFMTPEKACTISTSFWSNLLKAGISLFA 134
GI+ A Y G ++ + Q K +I+ TP + + +L+A +
Sbjct: 329 KAYGIRVSAVYGGMSKLE---QFKELKAGCEIVVATPGRLIDMLKMKALAMLRA--TYLV 383
Query: 135 VDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATATEKVRFDIIKSLKMNNPY-V 193
+DEA + + G + +V + ++R + F EK+ +I +++P V
Sbjct: 384 LDEADRMFDLGFEPQVR-SIVGQIRPDRQTLLFSATMPRKVEKLAREI-----LSDPIRV 437
Query: 194 LVGSFDRAN--LFYGVKPFSRGQSFIDELVREISKEVDSGTSTIIYCTTIKDVEQISKSL 251
VG AN + V+ + L+ ++ + +D G T+++ + V++I L
Sbjct: 438 TVGEVGMANEDITQVVQVIPSDSEKLPWLLEKLHEMIDQG-DTLVFASKKATVDEIEVQL 496
Query: 252 TEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRKVIHYGCPKS 311
+ G K HG + SR + + F +++AT G+D +I+ V+++ K
Sbjct: 497 GQRGFKVAALHGDKDQSSRMDILQKFKSGAYHVLIATDVAARGLDIKSIKTVVNFDIAKD 556
Query: 312 IESYYQESGRCGRDG 326
++ + GR GR G
Sbjct: 557 MDMHVHRIGRTGRAG 571
>Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10127066 | 20130731
Length = 573
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 133/324 (41%), Gaps = 37/324 (11%)
Query: 32 RDCVVVMATGSGKSLCYQVPPL-VVKKT-----GIVVSPLISLMQDQVMALKERG----- 80
+D + TG+GK++ + +P + VV K+ G +P++ L+ L +
Sbjct: 143 KDVLAKAKTGTGKTVAFLLPSIEVVVKSPPSDPGQSQTPILVLVVCPTRELARQAAAEAT 202
Query: 81 --------IKAEYLGSAQKDFTVQTKAEHGQFDILFMTPEKA---CTISTSFWSNLLKAG 129
I A+ + K + Q + + IL TP + + F SNL+ G
Sbjct: 203 KLLKYHPTIGAQVVIGGTKIVSEQKRIQKNPCQILVATPGRLKDHIAKTAGFASNLM--G 260
Query: 130 ISLFAVDEAHCISEWGHDFRVEYKNLDKLRSVLVEVPFVGLTATATEKVRFDIIKSLKMN 189
+ F +DEA + + G FR + + + + SV + + +AT + V +LK +
Sbjct: 261 LKTFVIDEADRLLDMG--FRKDIEEI--ITSVPKQRQTLMFSATIPKAVHQVCNVALKKD 316
Query: 190 NPYVLV------GSFDRANLFYGVKPFSRGQSFIDELVRE-ISKEVDSGTSTIIYCTTIK 242
++ + + + + P + S + +++E I+ EVD +++CTT
Sbjct: 317 YEFINTVQEGTEETHSQVRQMHLIAPLDKHFSLLSVILKEHIADEVD--YKVLVFCTTAM 374
Query: 243 DVEQISKSLTEAGIKAGMYHGQMNGKSREESHRLFVRDEVQIMVATIAFGMGIDKPNIRK 302
++ L + + + + R F + + I+V + G+D P++
Sbjct: 375 VTSLVASLLGKLDLNVREIYSRKKQGFRNRVSDEFRKSKRLILVTSDVSARGVDYPDVSL 434
Query: 303 VIHYGCPKSIESYYQESGRCGRDG 326
V+ G P E Y GR GR G
Sbjct: 435 VVQLGIPADKELYIHRLGRTGRIG 458