Miyakogusa Predicted Gene

Lj2g3v1633210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1633210.1 Non Characterized Hit- tr|G7IR41|G7IR41_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,43.51,0.000000000000006, ,gene.g41962.t1.1
         (148 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g041455.1 | hypothetical protein | HC | chr1:15547636-1554...    85   2e-17
Medtr5g056450.1 | hypothetical protein | HC | chr5:23246234-2324...    59   1e-09
Medtr1g048880.1 | hypothetical protein | LC | chr1:18854559-1885...    52   2e-07
Medtr4g063510.1 | hypothetical protein | LC | chr4:23514765-2351...    47   9e-06

>Medtr1g041455.1 | hypothetical protein | HC |
           chr1:15547636-15548139 | 20130731
          Length = 167

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 78/154 (50%), Gaps = 38/154 (24%)

Query: 1   MRRLYS------QTQHVSHRFPATFPIPTGIETQQNINDGWFFHSPPQPMTMSQPRRNIF 54
           +RRLYS      Q Q  SH  P  F +P  I+TQ N NDG  F    QP    QPRRN F
Sbjct: 46  IRRLYSTDHINPQVQFPSHCIPPGFHVP--IDTQNN-NDGRIF----QP----QPRRNHF 94

Query: 55  FSPGDQVGSSQPVRKMQLPPQLHALSSAGNNTVAGRMLAPSPTPQSKPEESAYGGTKAYI 114
            +    VGS Q  +     P ++                       + EES+  GTKAYI
Sbjct: 95  LN----VGSMQLTQHGLPNPHVYQWKHL-----------------EEEEESSNDGTKAYI 133

Query: 115 TQLEKPIKKIDFIDLVNTDDDNAEVKPLDLTLKL 148
            QLEKPIKKIDFIDLV  DDDN+  + LDL LKL
Sbjct: 134 MQLEKPIKKIDFIDLVGNDDDNSGPQKLDLALKL 167


>Medtr5g056450.1 | hypothetical protein | HC |
           chr5:23246234-23246710 | 20130731
          Length = 158

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 66/120 (55%), Gaps = 33/120 (27%)

Query: 32  NDGWFFHSPPQPMTMS-QPRRNIFFSPGDQVGSSQPVRKMQLPPQLHALSSAGNNTVAGR 90
           +DG  F   P+P  +  QP +N FF     VG     R+MQLPP ++             
Sbjct: 69  HDGKIFQ--PKPTVIRPQPSKNPFFG---HVG----YRQMQLPPHVN------------- 106

Query: 91  MLAPSPTPQSK--PEESAYGGTKAYITQLEKPIKKIDFIDLVNTDDDNAEVKPLDLTLKL 148
                   QSK    ES+  GTKAYI QLEKPIKKIDFIDLVN DDDN +V  LDL+LKL
Sbjct: 107 --------QSKHLEGESSNDGTKAYIKQLEKPIKKIDFIDLVNNDDDNPDVNTLDLSLKL 158


>Medtr1g048880.1 | hypothetical protein | LC |
           chr1:18854559-18854098 | 20130731
          Length = 153

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 62/155 (40%), Gaps = 51/155 (32%)

Query: 1   MRRLYS-----QTQHVSHRFPATFPIPTGIETQQNINDGWFFHSPPQPMTMSQPRRNIFF 55
           +RR YS     Q Q + +  P  F +P      QN+ND   F   P P  M Q  RN   
Sbjct: 43  IRRHYSEPFNPQGQFLWYSSPPGFHVPYDT---QNMNDARIFQPQPHPRAMLQLTRNQI- 98

Query: 56  SPGDQVGSSQPVRKMQLPP--QLHALSSAGNNTVAGRMLAPSPTPQSKPEESAYGGTKAY 113
                     P   +  PP  QL  L                       EES+  GTK Y
Sbjct: 99  ----------PSHVLPNPPVYQLEHLE----------------------EESSNDGTKPY 126

Query: 114 ITQLEKPIKKIDFIDLVNTDDDNAEVKPLDLTLKL 148
           I QLEKPIKK         DDDN+ V  LDLTLKL
Sbjct: 127 IVQLEKPIKK--------KDDDNSAVPMLDLTLKL 153


>Medtr4g063510.1 | hypothetical protein | LC |
           chr4:23514765-23514217 | 20130731
          Length = 182

 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 58/129 (44%), Gaps = 19/129 (14%)

Query: 1   MRRL-YSQTQHVSHRFPATFPIPTGIE-TQQNINDGWFFHSPPQ--PMTMSQPRRNIFFS 56
           MRRL +  +Q V H+    FP P  +  T  N      F  P Q   + +SQPR N F +
Sbjct: 43  MRRLSHMSSQRVLHQHQPNFPRPMLMHGTDGNFAGNRAFQEPQQQQALLISQPRVNQFSN 102

Query: 57  PGDQVGSSQPVRKMQLPPQLHALSSAGNNTVAGRMLAPSPTP----QSKPEESAYGGTKA 112
           P  QV +SQP            + S  NN     M +    P      + E S+  GT+A
Sbjct: 103 PSLQVVASQP-----------PMPSLRNNVNVTNMTSSVAPPILQMNDEIEVSSIDGTRA 151

Query: 113 YITQLEKPI 121
           YI QL+KPI
Sbjct: 152 YIKQLDKPI 160