Miyakogusa Predicted Gene

Lj2g3v1599830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1599830.1 Non Characterized Hit- tr|I3SLX4|I3SLX4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.22,0.0000000006, ,TC72538.path1.1
         (36 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g073210.2 | glutamate receptor 3.2 | HC | chr8:30988646-30...    51   2e-07
Medtr8g073210.1 | glutamate receptor 3.2 | HC | chr8:30989244-30...    51   2e-07
Medtr8g073210.9 | glutamate receptor 3.2 | HC | chr8:30988750-30...    51   2e-07

>Medtr8g073210.2 | glutamate receptor 3.2 | HC |
           chr8:30988646-30984347 | 20130731
          Length = 941

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 2/38 (5%)

Query: 1   MERISYRSTSEVGSSIISNKEFSLS--SLSRIDSANEV 36
           MERISYRSTSEVGS+I SNK+FS S  SL+RIDS N V
Sbjct: 904 MERISYRSTSEVGSNITSNKDFSRSSTSLNRIDSPNIV 941


>Medtr8g073210.1 | glutamate receptor 3.2 | HC |
           chr8:30989244-30984347 | 20130731
          Length = 941

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 2/38 (5%)

Query: 1   MERISYRSTSEVGSSIISNKEFSLS--SLSRIDSANEV 36
           MERISYRSTSEVGS+I SNK+FS S  SL+RIDS N V
Sbjct: 904 MERISYRSTSEVGSNITSNKDFSRSSTSLNRIDSPNIV 941


>Medtr8g073210.9 | glutamate receptor 3.2 | HC |
           chr8:30988750-30984347 | 20130731
          Length = 941

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 2/38 (5%)

Query: 1   MERISYRSTSEVGSSIISNKEFSLS--SLSRIDSANEV 36
           MERISYRSTSEVGS+I SNK+FS S  SL+RIDS N V
Sbjct: 904 MERISYRSTSEVGSNITSNKDFSRSSTSLNRIDSPNIV 941