Miyakogusa Predicted Gene
- Lj2g3v1586470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1586470.1 Non Characterized Hit- tr|I3K7J5|I3K7J5_ORENI
Uncharacterized protein OS=Oreochromis niloticus GN=MO,36,2e-18,no
description,ATPase-like, ATP-binding domain; HATPase_c_3,NULL;
SUBFAMILY NOT NAMED,NULL; ZINC FIN,gene.g41931.t1.1
(397 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g024810.1 | CW-type zinc finger protein | HC | chr5:100112... 402 e-112
Medtr3g077540.2 | histidine kinase-, DNA gyrase B | HC | chr3:34... 84 4e-16
Medtr3g077540.1 | histidine kinase-, DNA gyrase B | HC | chr3:34... 84 4e-16
Medtr4g105530.1 | histidine kinase-, DNA gyrase B | HC | chr4:43... 80 4e-15
Medtr8g096410.3 | histidine kinase-, DNA gyrase B, putative | HC... 79 8e-15
Medtr8g096410.1 | histidine kinase-, DNA gyrase B, putative | HC... 79 1e-14
Medtr8g096410.4 | histidine kinase-, DNA gyrase B, putative | HC... 79 1e-14
Medtr8g096410.2 | histidine kinase-, DNA gyrase B, putative | HC... 79 1e-14
>Medtr5g024810.1 | CW-type zinc finger protein | HC |
chr5:10011299-9997842 | 20130731
Length = 694
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/317 (65%), Positives = 237/317 (74%), Gaps = 20/317 (6%)
Query: 1 MHIFLKKDQKLICPVKCSDPPVELPQELIIKCMFKQKKMSGLSKLPQFPLTRAPSNPRDE 60
M + LKKD K IC +K S PP ELPQEL I + K+KK++ +S LPQF + AP++ RD
Sbjct: 3 MALSLKKDWKPICDIKFSSPPTELPQELNIDSIVKKKKLADISALPQFSVAPAPNSSRDR 62
Query: 61 YEWEKFLSFLHEHDRVAYGEFEQIKFYILPPAKASKFSPISFEYQIDHTRTVDTRPRDCE 120
EW KFL+FLH +D VA FEQ KFYILPP S S ++ YQI ++ TRPRDCE
Sbjct: 63 NEWGKFLNFLHRYDMVAITGFEQYKFYILPPPIVSISSTVNIAYQIG---SICTRPRDCE 119
Query: 121 SGSHLAEECVGQVNAMGRCLANGADVCSSDLKIPPVEDRANRFTAETCGGYQSHVKQDRI 180
SG +NG DV SS K PP ED AN FT+ETCGG QS V QDR+
Sbjct: 120 SGP-----------------SNGGDVSSSRPKFPPEEDLANHFTSETCGGSQSRVMQDRL 162
Query: 181 LEKNLIRVDPSYLKTLGQAHSGWVFGGIAELVDNSRDAKATKIDISVDMIKLEKSGKDVP 240
KN +++D SYLKTLGQAHSGW+FGGIAELVDNS DAKATK+DI V+MIKL+KSGKDVP
Sbjct: 163 HGKNSVKIDQSYLKTLGQAHSGWIFGGIAELVDNSSDAKATKMDIFVEMIKLKKSGKDVP 222
Query: 241 MLSVIDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQTA 300
MLSVIDDGQGM+H+EV+KMVS GHKQ DDKD IGRFGVGFKTGAMRLGRDVLVLTQTA
Sbjct: 223 MLSVIDDGQGMNHEEVIKMVSLGHKQSGYDDKDQIGRFGVGFKTGAMRLGRDVLVLTQTA 282
Query: 301 NSRSIAFLSQSLNEGKD 317
NSRSIAFLSQSLNEGKD
Sbjct: 283 NSRSIAFLSQSLNEGKD 299
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 83/110 (75%), Gaps = 7/110 (6%)
Query: 281 GFKTGAMRLGRDVLVLTQTANSRSIAFLSQSLNEGKDVPLDYSLRAYLEVIFLVPRMKMS 340
G K G+ D+ + ++ RS A L Q LN+ VPLDYSLRAYLEVIFLVPRMK+S
Sbjct: 379 GLKGGSSFHQGDIFIRSK----RSRARLGQ-LNQ--KVPLDYSLRAYLEVIFLVPRMKIS 431
Query: 341 VQGTLVKSRPLANFLTKTVIETGIILGRPVELTLGFSQLEWEQASCGIFL 390
VQ LVKSRPLANFLT T+I TG ILGR VEL LGFSQLEW+QASCG+FL
Sbjct: 432 VQRKLVKSRPLANFLTNTIIATGDILGRAVELILGFSQLEWDQASCGVFL 481
>Medtr3g077540.2 | histidine kinase-, DNA gyrase B | HC |
chr3:34846655-34833326 | 20130731
Length = 643
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 23/176 (13%)
Query: 155 PVEDRANRFTAETC-----------GGY-QSHVKQDRILE-KNLIRVDPSYLKTLGQAHS 201
P++D + + C G Y + H Q + + KN + V P +L + +H
Sbjct: 78 PIDDTGISYASPLCAAPLSRQFWKAGSYDEGHASQIGVKDGKNYLHVHPMFLHSNATSHK 137
Query: 202 GWVFGGIAELVDNSRDA-KATKIDISVDMIKLEKSGKDVPMLSVIDDGQGMDHDEVVKMV 260
W FG IAEL+DN+ D + +SVD + G P L + DDG GMD + + + +
Sbjct: 138 -WAFGAIAELLDNAVDEIQNGATFVSVDKTSNPRDGS--PALLIQDDGGGMDPEAMRRCM 194
Query: 261 SFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQTAN----SRSIAFLSQSL 312
SFG DK+ K IG++G GFKT +MRLG D +V ++ N ++SI LS +
Sbjct: 195 SFGFS--DKNSKLSIGQYGNGFKTSSMRLGADAIVFSRHLNNGILTQSIGLLSYTF 248
>Medtr3g077540.1 | histidine kinase-, DNA gyrase B | HC |
chr3:34846699-34833381 | 20130731
Length = 643
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 23/176 (13%)
Query: 155 PVEDRANRFTAETC-----------GGY-QSHVKQDRILE-KNLIRVDPSYLKTLGQAHS 201
P++D + + C G Y + H Q + + KN + V P +L + +H
Sbjct: 78 PIDDTGISYASPLCAAPLSRQFWKAGSYDEGHASQIGVKDGKNYLHVHPMFLHSNATSHK 137
Query: 202 GWVFGGIAELVDNSRDA-KATKIDISVDMIKLEKSGKDVPMLSVIDDGQGMDHDEVVKMV 260
W FG IAEL+DN+ D + +SVD + G P L + DDG GMD + + + +
Sbjct: 138 -WAFGAIAELLDNAVDEIQNGATFVSVDKTSNPRDGS--PALLIQDDGGGMDPEAMRRCM 194
Query: 261 SFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQTAN----SRSIAFLSQSL 312
SFG DK+ K IG++G GFKT +MRLG D +V ++ N ++SI LS +
Sbjct: 195 SFGFS--DKNSKLSIGQYGNGFKTSSMRLGADAIVFSRHLNNGILTQSIGLLSYTF 248
>Medtr4g105530.1 | histidine kinase-, DNA gyrase B | HC |
chr4:43806717-43795114 | 20130731
Length = 654
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 74/135 (54%), Gaps = 10/135 (7%)
Query: 183 KNLIRVDPSYLKTLGQAHSGWVFGGIAELVDNSRDAKATKID-ISVDMIKLEKSGKDVPM 241
KN + V P +L + +H WVFG IAEL+DN+ D + VD I K G P
Sbjct: 113 KNYLHVHPLFLHSNATSHK-WVFGAIAELLDNAVDEIHNGATFVKVDKILNPKDGS--PA 169
Query: 242 LSVIDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQTAN 301
L + DDG GM + + + +SFG DK + IG++G GFKTG+MRLG D +V + N
Sbjct: 170 LLIQDDGNGMGPEAMQRCMSFGFS--DKISEFAIGQYGNGFKTGSMRLGADAIVFSCHVN 227
Query: 302 ----SRSIAFLSQSL 312
++SI LS +
Sbjct: 228 DMVCTKSIGLLSYTF 242
>Medtr8g096410.3 | histidine kinase-, DNA gyrase B, putative | HC |
chr8:40447933-40438223 | 20130731
Length = 827
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 17/173 (9%)
Query: 163 FTAETCGGYQSHVKQDRILEKNLIRVDPSYLKTLGQAHSGWVFGGIAELVDNSRDAKATK 222
+ A GG + + + + +RV P +L + +H W G AEL+DN+ D
Sbjct: 127 WKAGDYGGSPARAFESSTVGMDHVRVHPKFLHSNATSHK-WALGAFAELLDNALDEVCNG 185
Query: 223 ID-ISVDMIKLEKSGKDVPMLSVIDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVG 281
++VDM+ +K G ML V D+G GMD D++ + +S G+ + K + IG++G G
Sbjct: 186 ATYVNVDMLASKKDGS--RMLLVEDNGGGMDPDKIRQCMSLGYSEKSKM-ANTIGQYGNG 242
Query: 282 FKTGAMRLGRDVLVLTQTAN------SRSIAFLSQSL--NEGKD---VP-LDY 322
FKT MRLG DV+V + +RSI LS + N GK+ VP LDY
Sbjct: 243 FKTSTMRLGADVIVFSCCQGKDGKRPTRSIGLLSYTFLRNTGKEDIVVPMLDY 295
>Medtr8g096410.1 | histidine kinase-, DNA gyrase B, putative | HC |
chr8:40447933-40438223 | 20130731
Length = 804
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 17/173 (9%)
Query: 163 FTAETCGGYQSHVKQDRILEKNLIRVDPSYLKTLGQAHSGWVFGGIAELVDNSRDAKATK 222
+ A GG + + + + +RV P +L + +H W G AEL+DN+ D
Sbjct: 127 WKAGDYGGSPARAFESSTVGMDHVRVHPKFLHSNATSHK-WALGAFAELLDNALDEVCNG 185
Query: 223 ID-ISVDMIKLEKSGKDVPMLSVIDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVG 281
++VDM+ +K G ML V D+G GMD D++ + +S G+ + K + IG++G G
Sbjct: 186 ATYVNVDMLASKKDGS--RMLLVEDNGGGMDPDKIRQCMSLGYSEKSKM-ANTIGQYGNG 242
Query: 282 FKTGAMRLGRDVLVLTQTAN------SRSIAFLSQSL--NEGKD---VP-LDY 322
FKT MRLG DV+V + +RSI LS + N GK+ VP LDY
Sbjct: 243 FKTSTMRLGADVIVFSCCQGKDGKRPTRSIGLLSYTFLRNTGKEDIVVPMLDY 295
>Medtr8g096410.4 | histidine kinase-, DNA gyrase B, putative | HC |
chr8:40447933-40438223 | 20130731
Length = 798
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 17/173 (9%)
Query: 163 FTAETCGGYQSHVKQDRILEKNLIRVDPSYLKTLGQAHSGWVFGGIAELVDNSRDAKATK 222
+ A GG + + + + +RV P +L + +H W G AEL+DN+ D
Sbjct: 127 WKAGDYGGSPARAFESSTVGMDHVRVHPKFLHSNATSHK-WALGAFAELLDNALDEVCNG 185
Query: 223 ID-ISVDMIKLEKSGKDVPMLSVIDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVG 281
++VDM+ +K G ML V D+G GMD D++ + +S G+ + K + IG++G G
Sbjct: 186 ATYVNVDMLASKKDGS--RMLLVEDNGGGMDPDKIRQCMSLGYSEKSKM-ANTIGQYGNG 242
Query: 282 FKTGAMRLGRDVLVLTQTAN------SRSIAFLSQSL--NEGKD---VP-LDY 322
FKT MRLG DV+V + +RSI LS + N GK+ VP LDY
Sbjct: 243 FKTSTMRLGADVIVFSCCQGKDGKRPTRSIGLLSYTFLRNTGKEDIVVPMLDY 295
>Medtr8g096410.2 | histidine kinase-, DNA gyrase B, putative | HC |
chr8:40447933-40438223 | 20130731
Length = 802
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 17/173 (9%)
Query: 163 FTAETCGGYQSHVKQDRILEKNLIRVDPSYLKTLGQAHSGWVFGGIAELVDNSRDAKATK 222
+ A GG + + + + +RV P +L + +H W G AEL+DN+ D
Sbjct: 127 WKAGDYGGSPARAFESSTVGMDHVRVHPKFLHSNATSHK-WALGAFAELLDNALDEVCNG 185
Query: 223 ID-ISVDMIKLEKSGKDVPMLSVIDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVG 281
++VDM+ +K G ML V D+G GMD D++ + +S G+ + K + IG++G G
Sbjct: 186 ATYVNVDMLASKKDGS--RMLLVEDNGGGMDPDKIRQCMSLGYSEKSKM-ANTIGQYGNG 242
Query: 282 FKTGAMRLGRDVLVLTQTAN------SRSIAFLSQSL--NEGKD---VP-LDY 322
FKT MRLG DV+V + +RSI LS + N GK+ VP LDY
Sbjct: 243 FKTSTMRLGADVIVFSCCQGKDGKRPTRSIGLLSYTFLRNTGKEDIVVPMLDY 295