Miyakogusa Predicted Gene

Lj2g3v1575310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1575310.1 tr|Q6Z6H7|Q6Z6H7_ORYSJ Armadillo/beta-catenin
repeat protein-like OS=Oryza sativa subsp. japonica GN,65.15,5e-19,no
description,Armadillo-like helical; UNCHARACTERIZED,NULL,CUFF.37609.1
         (87 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g034000.1 | armadillo/beta-catenin-like repeat protein | H...   120   2e-28

>Medtr1g034000.1 | armadillo/beta-catenin-like repeat protein | HC |
           chr1:12286430-12296265 | 20130731
          Length = 459

 Score =  120 bits (302), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/63 (88%), Positives = 61/63 (96%)

Query: 22  QVMSIISVLSLRSPENAARAIEAGAGDLAIQAMEKFPAAHQMQRSSCLMIRNLVVRNPEN 81
           ++MSIISVLSLRSPENAARAIEAGAGDLAIQAM+KFPAAHQMQR+SCLMIRNLV RNPEN
Sbjct: 359 EIMSIISVLSLRSPENAARAIEAGAGDLAIQAMQKFPAAHQMQRNSCLMIRNLVARNPEN 418

Query: 82  RQV 84
           R +
Sbjct: 419 RTI 421