Miyakogusa Predicted Gene
- Lj2g3v1574130.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1574130.1 Non Characterized Hit- tr|K4DH47|K4DH47_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,55.06,5e-17,HSP20,Alpha crystallin/Hsp20 domain;
ARID,ARID/BRIGHT DNA-binding domain; ARID/BRIGHT DNA binding
do,CUFF.37532.1
(781 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g024920.1 | AT-rich interactive domain protein | HC | chr5... 630 e-180
Medtr5g024920.2 | AT-rich interactive domain protein | HC | chr5... 527 e-149
Medtr5g024920.3 | AT-rich interactive domain protein | HC | chr5... 527 e-149
Medtr3g116200.1 | ARID/bright DNA-binding domain protein | HC | ... 380 e-105
Medtr3g116200.2 | ARID/bright DNA-binding domain protein | HC | ... 296 4e-80
Medtr7g005970.1 | high mobility group B-like protein | LC | chr7... 55 4e-07
Medtr3g114920.1 | high mobility group B-like protein | HC | chr3... 53 1e-06
>Medtr5g024920.1 | AT-rich interactive domain protein | HC |
chr5:10083603-10075389 | 20130731
Length = 604
Score = 630 bits (1625), Expect = e-180, Method: Compositional matrix adjust.
Identities = 317/451 (70%), Positives = 342/451 (75%), Gaps = 45/451 (9%)
Query: 375 AETTVDAD-IPQSNKGVENDDSIHQNGVSDADTMMDAETMVEVKPEVFKAEDSKTCD--- 430
++ VDA +P + GVENDD QN VSD D M A VEVKPEV +A SK CD
Sbjct: 141 SDVKVDAKKLPLCSNGVENDDIACQNNVSDGDVEMIA-VEVEVKPEVCEAAVSKACDLEP 199
Query: 431 --------------------------------------NVDPMPSGHNDPTMLHAAPADT 452
+P+ S HNDPT AP DT
Sbjct: 200 ILLSNNNPTTPQPASSDANEPILSNHNDPTTPQPASSDANEPILSNHNDPTTPQPAPDDT 259
Query: 453 KSEFKNVLEVEKAD-EKQATEPSDNGNSNS-KNMFFLDPDHFYDGNESGTEEDQSAFMKE 510
+ E KNVLEV+ D E+Q EP DN N +S +NMFFLD DH+YDGNESGTEEDQ+AFMKE
Sbjct: 260 RPEIKNVLEVKSKDGEEQVAEPVDNENPDSPQNMFFLDADHYYDGNESGTEEDQAAFMKE 319
Query: 511 LENFFRERSMEFKPPKFYGEGLNCLKLWRSVTRLGGYDKVTSCKLWRQVGESFKPPKTCT 570
LENFFRERSM+FK PKFYGE LNCLKLWR+V RLGGY+KVTSCKLWR VGESFKPPKTCT
Sbjct: 320 LENFFRERSMDFKHPKFYGEWLNCLKLWRAVMRLGGYEKVTSCKLWRSVGESFKPPKTCT 379
Query: 571 TVSWTFRGFYEKALLDYERHNIKGGELNVPIASQPEPMNIENQASVSGXXXXXXXXXXMQ 630
TVSWTFRGFYEKALLDYERHNIKGGELNVPIAS PEP+N+ENQ SG M+
Sbjct: 380 TVSWTFRGFYEKALLDYERHNIKGGELNVPIASPPEPVNVENQGLASGRSRRYAAEQAMR 439
Query: 631 GWHSQRLLGNGEVSDPIIKDRNSVPVQKREKQLKSINLLKRKKPSYMDNAVKAARSKPSK 690
GWHSQRLLGNGEV DPIIKDRN+V VQKREKQLKSIN+ KRK PSYMDNAVKAARSKPS+
Sbjct: 440 GWHSQRLLGNGEVGDPIIKDRNAVSVQKREKQLKSINVPKRKSPSYMDNAVKAARSKPSR 499
Query: 691 PQLDTVVIDIGPPAEWVKVNVQKTKDCFEIYALVPGLLREEVRVQSDPAGRLVISGEPEH 750
PQL T V+DIGP A+WVKVNVQKTKDCFEIYALVPGLLREEVRVQSDPAGRLVISGEPEH
Sbjct: 500 PQLGTAVVDIGPSADWVKVNVQKTKDCFEIYALVPGLLREEVRVQSDPAGRLVISGEPEH 559
Query: 751 PNNPWGVTPFKKVVSLPSRIDPHQTSAVVTL 781
PNNPWGVTPFKKVVSLPSRIDPHQTSAVVTL
Sbjct: 560 PNNPWGVTPFKKVVSLPSRIDPHQTSAVVTL 590
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 187 EDSNAKLEAVTVEEDSNNVENGANHLESESNHVECGKAEPPAEDTHVKLEAVSEDIPQEY 246
++ + +++ VTVEE S NVEN SN V+ GK E AED +VK + VSE + QE
Sbjct: 62 QEMHLEVQPVTVEETSKNVENV-------SNDVKIGKEEVHAEDENVKPKVVSEGVSQEN 114
Query: 247 VQDTLHNVPVE-ADVQVFNTTXXXXXXXXXXXXXXFPQSTKGV 288
V+DTLH+VPVE AD + +T P + GV
Sbjct: 115 VKDTLHSVPVEAADAHILDTAEGEDASDVKVDAKKLPLCSNGV 157
>Medtr5g024920.2 | AT-rich interactive domain protein | HC |
chr5:10083078-10075472 | 20130731
Length = 636
Score = 527 bits (1358), Expect = e-149, Method: Compositional matrix adjust.
Identities = 273/426 (64%), Positives = 301/426 (70%), Gaps = 53/426 (12%)
Query: 359 DSVHQNGVSDADTAM--------DAETTVDAD-IPQSNKGVENDDSIHQNGVSDADTMMD 409
D++H V AD + ++ VDA +P + GVENDD QN VSD D M
Sbjct: 192 DTLHSVPVEAADAHILDTAEGEDASDVKVDAKKLPLCSNGVENDDIACQNNVSDGDVEMI 251
Query: 410 AETMVEVKPEVFKAEDSKTCD--------------------------------------- 430
A VEVKPEV +A SK CD
Sbjct: 252 A-VEVEVKPEVCEAAVSKACDLEPILLSNNNPTTPQPASSDANEPILSNHNDPTTPQPAS 310
Query: 431 --NVDPMPSGHNDPTMLHAAPADTKSEFKNVLEVEKAD-EKQATEPSDNGNSNS-KNMFF 486
+P+ S HNDPT AP DT+ E KNVLEV+ D E+Q EP DN N +S +NMFF
Sbjct: 311 SDANEPILSNHNDPTTPQPAPDDTRPEIKNVLEVKSKDGEEQVAEPVDNENPDSPQNMFF 370
Query: 487 LDPDHFYDGNESGTEEDQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRSVTRLGG 546
LD DH+YDGNESGTEEDQ+AFMKELENFFRERSM+FK PKFYGE LNCLKLWR+V RLGG
Sbjct: 371 LDADHYYDGNESGTEEDQAAFMKELENFFRERSMDFKHPKFYGEWLNCLKLWRAVMRLGG 430
Query: 547 YDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPIASQPE 606
Y+KVTSCKLWR VGESFKPPKTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPIAS PE
Sbjct: 431 YEKVTSCKLWRSVGESFKPPKTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPIASPPE 490
Query: 607 PMNIENQASVSGXXXXXXXXXXMQGWHSQRLLGNGEVSDPIIKDRNSVPVQKREKQLKSI 666
P+N+ENQ SG M+GWHSQRLLGNGEV DPIIKDRN+V VQKREKQLKSI
Sbjct: 491 PVNVENQGLASGRSRRYAAEQAMRGWHSQRLLGNGEVGDPIIKDRNAVSVQKREKQLKSI 550
Query: 667 NLLKRKKPSYMDNAVKAARSKPSKPQLDTVVIDIGPPAEWVKVNVQKTKDCFEIYALVPG 726
N+ KRK PSYMDNAVKAARSKPS+PQL T V+DIGP A+WVKVNVQKTKDCFEIYALVPG
Sbjct: 551 NVPKRKSPSYMDNAVKAARSKPSRPQLGTAVVDIGPSADWVKVNVQKTKDCFEIYALVPG 610
Query: 727 LLREEV 732
LLREEV
Sbjct: 611 LLREEV 616
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 187 EDSNAKLEAVTVEEDSNNVENGANHLESESNHVECGKAEPPAEDTHVKLEAVSEDIPQEY 246
++ + +++ VTVEE S NVEN SN V+ GK E AED +VK + VSE + QE
Sbjct: 137 QEMHLEVQPVTVEETSKNVENV-------SNDVKIGKEEVHAEDENVKPKVVSEGVSQEN 189
Query: 247 VQDTLHNVPVE-ADVQVFNTTXXXXXXXXXXXXXXFPQSTKGV 288
V+DTLH+VPVE AD + +T P + GV
Sbjct: 190 VKDTLHSVPVEAADAHILDTAEGEDASDVKVDAKKLPLCSNGV 232
>Medtr5g024920.3 | AT-rich interactive domain protein | HC |
chr5:10083078-10075421 | 20130731
Length = 636
Score = 527 bits (1358), Expect = e-149, Method: Compositional matrix adjust.
Identities = 273/426 (64%), Positives = 301/426 (70%), Gaps = 53/426 (12%)
Query: 359 DSVHQNGVSDADTAM--------DAETTVDAD-IPQSNKGVENDDSIHQNGVSDADTMMD 409
D++H V AD + ++ VDA +P + GVENDD QN VSD D M
Sbjct: 192 DTLHSVPVEAADAHILDTAEGEDASDVKVDAKKLPLCSNGVENDDIACQNNVSDGDVEMI 251
Query: 410 AETMVEVKPEVFKAEDSKTCD--------------------------------------- 430
A VEVKPEV +A SK CD
Sbjct: 252 A-VEVEVKPEVCEAAVSKACDLEPILLSNNNPTTPQPASSDANEPILSNHNDPTTPQPAS 310
Query: 431 --NVDPMPSGHNDPTMLHAAPADTKSEFKNVLEVEKAD-EKQATEPSDNGNSNS-KNMFF 486
+P+ S HNDPT AP DT+ E KNVLEV+ D E+Q EP DN N +S +NMFF
Sbjct: 311 SDANEPILSNHNDPTTPQPAPDDTRPEIKNVLEVKSKDGEEQVAEPVDNENPDSPQNMFF 370
Query: 487 LDPDHFYDGNESGTEEDQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRSVTRLGG 546
LD DH+YDGNESGTEEDQ+AFMKELENFFRERSM+FK PKFYGE LNCLKLWR+V RLGG
Sbjct: 371 LDADHYYDGNESGTEEDQAAFMKELENFFRERSMDFKHPKFYGEWLNCLKLWRAVMRLGG 430
Query: 547 YDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPIASQPE 606
Y+KVTSCKLWR VGESFKPPKTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPIAS PE
Sbjct: 431 YEKVTSCKLWRSVGESFKPPKTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPIASPPE 490
Query: 607 PMNIENQASVSGXXXXXXXXXXMQGWHSQRLLGNGEVSDPIIKDRNSVPVQKREKQLKSI 666
P+N+ENQ SG M+GWHSQRLLGNGEV DPIIKDRN+V VQKREKQLKSI
Sbjct: 491 PVNVENQGLASGRSRRYAAEQAMRGWHSQRLLGNGEVGDPIIKDRNAVSVQKREKQLKSI 550
Query: 667 NLLKRKKPSYMDNAVKAARSKPSKPQLDTVVIDIGPPAEWVKVNVQKTKDCFEIYALVPG 726
N+ KRK PSYMDNAVKAARSKPS+PQL T V+DIGP A+WVKVNVQKTKDCFEIYALVPG
Sbjct: 551 NVPKRKSPSYMDNAVKAARSKPSRPQLGTAVVDIGPSADWVKVNVQKTKDCFEIYALVPG 610
Query: 727 LLREEV 732
LLREEV
Sbjct: 611 LLREEV 616
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 187 EDSNAKLEAVTVEEDSNNVENGANHLESESNHVECGKAEPPAEDTHVKLEAVSEDIPQEY 246
++ + +++ VTVEE S NVEN SN V+ GK E AED +VK + VSE + QE
Sbjct: 137 QEMHLEVQPVTVEETSKNVENV-------SNDVKIGKEEVHAEDENVKPKVVSEGVSQEN 189
Query: 247 VQDTLHNVPVE-ADVQVFNTTXXXXXXXXXXXXXXFPQSTKGV 288
V+DTLH+VPVE AD + +T P + GV
Sbjct: 190 VKDTLHSVPVEAADAHILDTAEGEDASDVKVDAKKLPLCSNGV 232
>Medtr3g116200.1 | ARID/bright DNA-binding domain protein | HC |
chr3:54329792-54323677 | 20130731
Length = 372
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/295 (62%), Positives = 229/295 (77%), Gaps = 11/295 (3%)
Query: 493 YDGNESGTEEDQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRSVTRLGGYDKVTS 552
YD E+GT ++ AFMKELE+F+R RS+EFKPPKFY LNCLKLWR+V RLGGY+ VT+
Sbjct: 68 YD--EAGTPMEREAFMKELEHFYRSRSLEFKPPKFYQVPLNCLKLWRAVIRLGGYEVVTA 125
Query: 553 CKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPIASQPEPMNIEN 612
KLWR VGESF PPKTCTTVSWTFR FYEKALL+YE+H + GEL +P+ S +P ++E
Sbjct: 126 SKLWRSVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKREIGELQLPVGSLHQPSSVEK 185
Query: 613 QASV-----SGXXXXXXXXXXMQGWHSQRLLGNGEVSDPIIKDRNSVPVQKREKQLKSIN 667
+ +V SG MQGWH+QRL+G GEV + +KD+N P KREK LK+I
Sbjct: 186 ETAVYQAPGSGRARRDAAARAMQGWHAQRLMGYGEVPESAVKDKNFSPTPKREKNLKNIG 245
Query: 668 LL-KRKKPSYMDNAVKAARSKPSKPQLDTVVIDIGPPAEWVKVNVQKTKDCFEIYALVPG 726
++ K++ PS MD+ +AA + + QL T V+DIGPPA+WVK+NV++TKDCFE+YALVPG
Sbjct: 246 VINKQRTPSGMDD--RAANIEGDR-QLVTAVVDIGPPADWVKINVRETKDCFEVYALVPG 302
Query: 727 LLREEVRVQSDPAGRLVISGEPEHPNNPWGVTPFKKVVSLPSRIDPHQTSAVVTL 781
LLREEVRVQSDP GRLVI+G PE+ +NPWG+TPFKKVV+LP+RIDP QTSAVV+L
Sbjct: 303 LLREEVRVQSDPVGRLVITGMPENADNPWGITPFKKVVNLPARIDPLQTSAVVSL 357
>Medtr3g116200.2 | ARID/bright DNA-binding domain protein | HC |
chr3:54329788-54324897 | 20130731
Length = 312
Score = 296 bits (759), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 142/243 (58%), Positives = 182/243 (74%), Gaps = 9/243 (3%)
Query: 496 NESGTEEDQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRSVTRLGGYDKVTSCKL 555
+E+GT ++ AFMKELE+F+R RS+EFKPPKFY LNCLKLWR+V RLGGY+ VT+ KL
Sbjct: 69 DEAGTPMEREAFMKELEHFYRSRSLEFKPPKFYQVPLNCLKLWRAVIRLGGYEVVTASKL 128
Query: 556 WRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPIASQPEPMNIENQAS 615
WR VGESF PPKTCTTVSWTFR FYEKALL+YE+H + GEL +P+ S +P ++E + +
Sbjct: 129 WRSVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKREIGELQLPVGSLHQPSSVEKETA 188
Query: 616 V-----SGXXXXXXXXXXMQGWHSQRLLGNGEVSDPIIKDRNSVPVQKREKQLKSINLL- 669
V SG MQGWH+QRL+G GEV + +KD+N P KREK LK+I ++
Sbjct: 189 VYQAPGSGRARRDAAARAMQGWHAQRLMGYGEVPESAVKDKNFSPTPKREKNLKNIGVIN 248
Query: 670 KRKKPSYMDNAVKAARSKPSKPQLDTVVIDIGPPAEWVKVNVQKTKDCFEIYALVPGLLR 729
K++ PS MD+ +AA + + QL T V+DIGPPA+WVK+NV++TKDCFE+YALVPGLLR
Sbjct: 249 KQRTPSGMDD--RAANIEGDR-QLVTAVVDIGPPADWVKINVRETKDCFEVYALVPGLLR 305
Query: 730 EEV 732
EE
Sbjct: 306 EEF 308
>Medtr7g005970.1 | high mobility group B-like protein | LC |
chr7:435478-439265 | 20130731
Length = 437
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 507 FMKELENFFRERSMEFKPPKFYGEGLNCLKLWRSVTRLGGYDKVTSCKLWRQVGESFKPP 566
FM LE +F P G+ L+ +L+ VT GG +K+ + W++V +F P
Sbjct: 42 FMLTLEKLHASMGTKFMVPIIGGKELDLCRLFIEVTSRGGIEKLMKERRWKEVTAAFSFP 101
Query: 567 KTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPIASQPEPMNIENQASVS 617
T T S+ R +Y L YE+ + P +S ++NQ+++S
Sbjct: 102 STATNASFVLRKYYSSLLYHYEQIYYFRSKRWTPASSDA----LQNQSTMS 148
>Medtr3g114920.1 | high mobility group B-like protein | HC |
chr3:53678262-53676021 | 20130731
Length = 327
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%)
Query: 503 DQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRSVTRLGGYDKVTSCKLWRQVGES 562
D + F L F + +F P G+ L+ L+ VTR GY+KV + K WR+VG
Sbjct: 33 DPTLFWDTLRRFHFLMATKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSV 92
Query: 563 FKPPKTCTTVSWTFRGFYEKALLDYER 589
F+ T T+ S+ R Y L YE+
Sbjct: 93 FRFSSTTTSASFVLRKHYLNLLYHYEQ 119