Miyakogusa Predicted Gene

Lj2g3v1560860.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1560860.1 tr|G7K401|G7K401_MEDTR Conserved oligomeric Golgi
complex subunit OS=Medicago truncatula GN=MTR_5g02,91.22,0,seg,NULL;
COG6,Conserved oligomeric Golgi complex, subunit 6; COMPONENT OF
OLIGOMERIC GOLGI COMPLEX ,CUFF.37491.1
         (695 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g025410.1 | oligomeric subunit 6 | HC | chr5:10314336-1030...  1207   0.0  

>Medtr5g025410.1 | oligomeric subunit 6 | HC |
           chr5:10314336-10305589 | 20130731
          Length = 695

 Score = 1207 bits (3124), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/695 (85%), Positives = 629/695 (90%)

Query: 1   MGTTVAGLAPGLSRKLKKVLESRIDTPDLLSSLNTLSSFYDDNTPQARRNLRSTIEKRAL 60
           MGTTVAGLAPGLSRKLKKVLESRIDTPDLLSSLNTLSSFYDDNTPQARRNLRSTIEKR+L
Sbjct: 1   MGTTVAGLAPGLSRKLKKVLESRIDTPDLLSSLNTLSSFYDDNTPQARRNLRSTIEKRSL 60

Query: 61  SINHEFLDASHAVQLALDSVEDEVNALAECCDRIAKSLNSCSASTGDIISTTERLKQELE 120
           SINHEFLDASHA QLALDSVE+EVN+LAECCDRIAK+L+SCSAST DIISTTERLKQELE
Sbjct: 61  SINHEFLDASHAAQLALDSVENEVNSLAECCDRIAKALDSCSASTSDIISTTERLKQELE 120

Query: 121 TTTQRQEIVACFLRDYQLSPEEINALRDEELNENFFKALSHVQEIHANCKVLLRTHHQRA 180
           TTTQRQEIV CFLRDYQLSPEEINALRDE+LNENFFKALSHVQEIHANCKVLLRTHHQRA
Sbjct: 121 TTTQRQEIVTCFLRDYQLSPEEINALRDEDLNENFFKALSHVQEIHANCKVLLRTHHQRA 180

Query: 181 GLELMDMMAVYQEGAYERLCRWVQAECRRLGDTDNPEVSELLKTAVRYLRERSVLFKYCA 240
           GLELMDMMAVYQEGAYERLCRWVQAECR+LGDTDNPEV ELLKTAVRYLRERSVLFKYCA
Sbjct: 181 GLELMDMMAVYQEGAYERLCRWVQAECRKLGDTDNPEVGELLKTAVRYLRERSVLFKYCA 240

Query: 241 EEVANMRHNALFRRFISALTXXXXXXXXXXIEVHAHDPLRYVGDMLGWLHQALASERELV 300
           EEVANMRHNALFRRFISALT          IEVHAHDPLRYVGDMLGWLHQALASERELV
Sbjct: 241 EEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELV 300

Query: 301 LVLLDPDASVDTGPTAKQFSNNYDSGSAKTESDLIFVLDRIFEGVCRPFKLRVEQVLQSQ 360
           LVLLDPDA VDT PTAKQ SNN+++GS+KTE DL+FVLDRIFEGVCRPFK+RVEQVLQSQ
Sbjct: 301 LVLLDPDAIVDTRPTAKQLSNNFENGSSKTEIDLMFVLDRIFEGVCRPFKVRVEQVLQSQ 360

Query: 361 PSLIVSYKLSNTLEFYCYTMSDLLGRETALCNTLWALKDAAQKTFFDILKGRGEKLLRYP 420
           PSLIVSYKLSNTL+FYCYT+SDLLG+ETALCNTLW+LKDAAQKTFFDILKGRGEKLLRYP
Sbjct: 361 PSLIVSYKLSNTLQFYCYTISDLLGQETALCNTLWSLKDAAQKTFFDILKGRGEKLLRYP 420

Query: 421 PLVAVDLSPPSAVREGVSVLLEIIDNYNSMMVPASGQKPVFDPVISAILDPIIQMCERAA 480
           PLVAVDLSPP AVREGVSVLLEII+NYNSMM+PASGQKPVFDPVISAILDPIIQMCE+AA
Sbjct: 421 PLVAVDLSPPPAVREGVSVLLEIIENYNSMMIPASGQKPVFDPVISAILDPIIQMCEQAA 480

Query: 481 EAHKSKGAGHXXXXXXXXXXXXXXXXXXVDAILXXXXXXXXXXXXXXXXKIFLINCLCAI 540
           EAHKSKG G+                  VDAIL                KIFLINCL AI
Sbjct: 481 EAHKSKGVGNSSRRSRMSSDSGQLTKSSVDAILSNSRTASSSLTSETPSKIFLINCLSAI 540

Query: 541 QQPLSGHEVAAEYVKRLGTMIDSHLRVLVDKEADAILRKCNLSEKMPQFRNSVHNKGGDE 600
           QQPLSG+EVA EYVKRLGTMID+ LRVLV+KEADAILR+CNLSEKMP F NS+H  G +E
Sbjct: 541 QQPLSGYEVADEYVKRLGTMIDNQLRVLVEKEADAILRRCNLSEKMPHFHNSIHKDGDNE 600

Query: 601 VSTPLAEMEDTSPSILSECLKALFGLILGSESSLPEFEQMQVPRLRSEASIGVARSLAEA 660
           V TPLAE+EDTSP++LSE LKALFGLILGSESSLPEFEQ+QVPRLRSEASIGVARSL EA
Sbjct: 601 VGTPLAELEDTSPAVLSESLKALFGLILGSESSLPEFEQIQVPRLRSEASIGVARSLGEA 660

Query: 661 YELIYNAIMDPKNGYPDPRSLARHPPNQIRTILGI 695
           YELIY AIM+PKNGYPDPR+LARHPPNQIRTILGI
Sbjct: 661 YELIYKAIMEPKNGYPDPRALARHPPNQIRTILGI 695