Miyakogusa Predicted Gene

Lj2g3v1560800.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1560800.2 Non Characterized Hit- tr|I3STJ0|I3STJ0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.17,0,F-box-like,NULL; Herpes_UL92,Herpesvirus UL92; A Receptor
for Ubiquitination Targets,F-box domain, c,CUFF.37487.2
         (328 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g025560.1 | F-box SKIP31-like protein | HC | chr5:10372571...   546   e-156

>Medtr5g025560.1 | F-box SKIP31-like protein | HC |
           chr5:10372571-10376132 | 20130731
          Length = 324

 Score =  546 bits (1408), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 265/328 (80%), Positives = 286/328 (87%), Gaps = 4/328 (1%)

Query: 1   MTLSDDEDENLAQFLESEVLSEVSDKEEENLEEPKAKRKRIEEAESTKQGQGTKQISAPL 60
           MT SDDEDENLAQFLESEVLSEVSDKEE N+EEPKAKRKR +E +S+KQ   T Q S   
Sbjct: 1   MTFSDDEDENLAQFLESEVLSEVSDKEEVNVEEPKAKRKRTDEVDSSKQS--TIQCSGSS 58

Query: 61  SEPENYGVNNGVVPKRIETGFFSKIPPELFHHILKFLSSEDLISCSAVCTFLNYAASDEA 120
           S+P+NYG NN +VP+RIETGFFSK+PPELFHHILKFLSSEDLISCS VC+FL+ AASDEA
Sbjct: 59  SKPKNYGANNAMVPRRIETGFFSKVPPELFHHILKFLSSEDLISCSLVCSFLSCAASDEA 118

Query: 121 LWRRLYCMRWGLLPPTRKLRECPWKNLYIQRDGDDMVELVRNCQNEFKEYYIQMQAAKRS 180
           LWRRLYCMRWGLLPPTRK+R+CPWK LYIQRD +DMVELV +CQNEFKEYYIQMQAAKRS
Sbjct: 119 LWRRLYCMRWGLLPPTRKIRDCPWKKLYIQRDENDMVELVTSCQNEFKEYYIQMQAAKRS 178

Query: 181 QAPNPSQLNDDRIILDKTLADQVSSWKSSRGLSDTVVTDHACSGETCSYYAIGDVFICEK 240
           QAP+PSQL DD IILDKTLADQVSSWKSSRGLSDTVV DHACSG+TCSYY IGDVFICEK
Sbjct: 179 QAPHPSQLKDDSIILDKTLADQVSSWKSSRGLSDTVVNDHACSGKTCSYYQIGDVFICEK 238

Query: 241 TGQVHVCDETCREVVMDPTNELLVCTISGHCFDRLLSPAEMXXXXXXXXXXXXXXXXXFM 300
           TGQVHVCDETC+EVVMDP +ELLVCTISGHCFDRLLSP+EM                 FM
Sbjct: 239 TGQVHVCDETCKEVVMDPEDELLVCTISGHCFDRLLSPSEM--EPDSQQGVAADEEEPFM 296

Query: 301 GSGRFARAYLLGYNCADEKELEATLRFC 328
           GSGRFARAYLLGYNCADEKELE TLR+C
Sbjct: 297 GSGRFARAYLLGYNCADEKELEDTLRYC 324