Miyakogusa Predicted Gene

Lj2g3v1560740.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1560740.2 Non Characterized Hit- tr|B8LR96|B8LR96_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,35.79,0.00000005,RNASE L INHIBITOR,NULL; ATP-BINDING TRANSPORT
PROTEIN-RELATED,NULL; no description,NULL; P-loop cont,CUFF.37576.2
         (233 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g114170.1 | RNase L inhibitor ABC domain protein | HC | ch...   418   e-117
Medtr1g114170.2 | RNase L inhibitor ABC domain protein | HC | ch...   418   e-117
Medtr1g114170.3 | RNase L inhibitor ABC domain protein | HC | ch...   418   e-117
Medtr1g025075.1 | RNase L inhibitor ABC superfamily protein, put...   404   e-113
Medtr1g025075.2 | RNase L inhibitor ABC superfamily protein, put...   403   e-113
Medtr1g024860.1 | RNase L inhibitor ABC domain protein | HC | ch...   384   e-107
Medtr4g007890.1 | RNase L inhibitor ABC domain protein | HC | ch...   383   e-106

>Medtr1g114170.1 | RNase L inhibitor ABC domain protein | HC |
           chr1:51514340-51519700 | 20130731
          Length = 606

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/233 (86%), Positives = 211/233 (90%)

Query: 1   MFDEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGV 60
           MFDEPSSYLDVKQRLKAAQV+RSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGV
Sbjct: 239 MFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGV 298

Query: 61  VTLPFSVREGINIFLAGFVPTENLRFRDESLTFKVXXXXXXXXXXXXXXXRYKYPAMSKT 120
           VTLPFSVREGINIFL+GFVPTENLRFR+ SLTFKV               RYKYP M+KT
Sbjct: 299 VTLPFSVREGINIFLSGFVPTENLRFREVSLTFKVAETPQETAEEAQTYARYKYPTMTKT 358

Query: 121 QGNFRLRVAEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEGGSDVDMPEFNVSY 180
           QGNFRL V EGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPD++EGGSDV+MPEFNVSY
Sbjct: 359 QGNFRLHVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTIEGGSDVEMPEFNVSY 418

Query: 181 KPQKISPKFQSTVRHLLHQKIRDAYTHPQFVSDVMKPLLIEQLMDQEVVNLSG 233
           KPQKISPK Q +VRHLLHQ+IRDAYTHPQF+SDVMKPLLIEQLMDQEV NLSG
Sbjct: 419 KPQKISPKSQLSVRHLLHQRIRDAYTHPQFISDVMKPLLIEQLMDQEVQNLSG 471



 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)

Query: 1   MFDEPSSYLDVKQRLKAAQVI-RSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYG 59
           + DEPS+YLD +QR+ AA+VI R +L       +VEHD  +  YL+D +    G+P    
Sbjct: 491 LIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFIVEHDFIMATYLADRVIVYEGQPSIDC 550

Query: 60  VVTLPFSVREGINIFLAGFVPTENLRFRDESLTFK 94
               P S+  G+N+FL+      ++ FR +   F+
Sbjct: 551 TANCPQSLLTGMNLFLSHL----DITFRRDPTNFR 581


>Medtr1g114170.2 | RNase L inhibitor ABC domain protein | HC |
           chr1:51514432-51519597 | 20130731
          Length = 606

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/233 (86%), Positives = 211/233 (90%)

Query: 1   MFDEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGV 60
           MFDEPSSYLDVKQRLKAAQV+RSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGV
Sbjct: 239 MFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGV 298

Query: 61  VTLPFSVREGINIFLAGFVPTENLRFRDESLTFKVXXXXXXXXXXXXXXXRYKYPAMSKT 120
           VTLPFSVREGINIFL+GFVPTENLRFR+ SLTFKV               RYKYP M+KT
Sbjct: 299 VTLPFSVREGINIFLSGFVPTENLRFREVSLTFKVAETPQETAEEAQTYARYKYPTMTKT 358

Query: 121 QGNFRLRVAEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEGGSDVDMPEFNVSY 180
           QGNFRL V EGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPD++EGGSDV+MPEFNVSY
Sbjct: 359 QGNFRLHVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTIEGGSDVEMPEFNVSY 418

Query: 181 KPQKISPKFQSTVRHLLHQKIRDAYTHPQFVSDVMKPLLIEQLMDQEVVNLSG 233
           KPQKISPK Q +VRHLLHQ+IRDAYTHPQF+SDVMKPLLIEQLMDQEV NLSG
Sbjct: 419 KPQKISPKSQLSVRHLLHQRIRDAYTHPQFISDVMKPLLIEQLMDQEVQNLSG 471



 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)

Query: 1   MFDEPSSYLDVKQRLKAAQVI-RSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYG 59
           + DEPS+YLD +QR+ AA+VI R +L       +VEHD  +  YL+D +    G+P    
Sbjct: 491 LIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFIVEHDFIMATYLADRVIVYEGQPSIDC 550

Query: 60  VVTLPFSVREGINIFLAGFVPTENLRFRDESLTFK 94
               P S+  G+N+FL+      ++ FR +   F+
Sbjct: 551 TANCPQSLLTGMNLFLSHL----DITFRRDPTNFR 581


>Medtr1g114170.3 | RNase L inhibitor ABC domain protein | HC |
           chr1:51514432-51519597 | 20130731
          Length = 606

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/233 (86%), Positives = 211/233 (90%)

Query: 1   MFDEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGV 60
           MFDEPSSYLDVKQRLKAAQV+RSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGV
Sbjct: 239 MFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGV 298

Query: 61  VTLPFSVREGINIFLAGFVPTENLRFRDESLTFKVXXXXXXXXXXXXXXXRYKYPAMSKT 120
           VTLPFSVREGINIFL+GFVPTENLRFR+ SLTFKV               RYKYP M+KT
Sbjct: 299 VTLPFSVREGINIFLSGFVPTENLRFREVSLTFKVAETPQETAEEAQTYARYKYPTMTKT 358

Query: 121 QGNFRLRVAEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEGGSDVDMPEFNVSY 180
           QGNFRL V EGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPD++EGGSDV+MPEFNVSY
Sbjct: 359 QGNFRLHVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTIEGGSDVEMPEFNVSY 418

Query: 181 KPQKISPKFQSTVRHLLHQKIRDAYTHPQFVSDVMKPLLIEQLMDQEVVNLSG 233
           KPQKISPK Q +VRHLLHQ+IRDAYTHPQF+SDVMKPLLIEQLMDQEV NLSG
Sbjct: 419 KPQKISPKSQLSVRHLLHQRIRDAYTHPQFISDVMKPLLIEQLMDQEVQNLSG 471



 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)

Query: 1   MFDEPSSYLDVKQRLKAAQVI-RSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYG 59
           + DEPS+YLD +QR+ AA+VI R +L       +VEHD  +  YL+D +    G+P    
Sbjct: 491 LIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFIVEHDFIMATYLADRVIVYEGQPSIDC 550

Query: 60  VVTLPFSVREGINIFLAGFVPTENLRFRDESLTFK 94
               P S+  G+N+FL+      ++ FR +   F+
Sbjct: 551 TANCPQSLLTGMNLFLSHL----DITFRRDPTNFR 581


>Medtr1g025075.1 | RNase L inhibitor ABC superfamily protein,
           putative | HC | chr1:7999442-8005224 | 20130731
          Length = 607

 Score =  404 bits (1038), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 195/233 (83%), Positives = 206/233 (88%)

Query: 1   MFDEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGV 60
           MFDEPSSYLDVKQRLKAAQV+RSLLRPNS+VIVVEHDLSVLDYLSDFICCLYGKPG YGV
Sbjct: 240 MFDEPSSYLDVKQRLKAAQVVRSLLRPNSFVIVVEHDLSVLDYLSDFICCLYGKPGVYGV 299

Query: 61  VTLPFSVREGINIFLAGFVPTENLRFRDESLTFKVXXXXXXXXXXXXXXXRYKYPAMSKT 120
           VTLPFSVREGINIFL+GFVPTENLRFR+ SLTFKV               R+KYP M+KT
Sbjct: 300 VTLPFSVREGINIFLSGFVPTENLRFREVSLTFKVAENPQETAEEAQTYARFKYPTMTKT 359

Query: 121 QGNFRLRVAEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEGGSDVDMPEFNVSY 180
           QGNFRL   EGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPD+ EG SDV+MPEFNVSY
Sbjct: 360 QGNFRLHAVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTTEGVSDVEMPEFNVSY 419

Query: 181 KPQKISPKFQSTVRHLLHQKIRDAYTHPQFVSDVMKPLLIEQLMDQEVVNLSG 233
           KPQKISPK Q  VR++LHQKIRDAYTHPQF+SDVMKPLLIEQLMDQEV NLSG
Sbjct: 420 KPQKISPKSQLPVRYMLHQKIRDAYTHPQFISDVMKPLLIEQLMDQEVQNLSG 472



 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)

Query: 1   MFDEPSSYLDVKQRLKAAQVI-RSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYG 59
           + DEPS+YLD +QR+ AA+VI R +L       +VEHD  +  YL+D +    G+P    
Sbjct: 492 LIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFIVEHDFIMATYLADKVIVYEGQPSINC 551

Query: 60  VVTLPFSVREGINIFLAGFVPTENLRFRDESLTFK 94
               P S+  G+N+FL+      ++ FR +   F+
Sbjct: 552 TANCPQSLLTGMNLFLSHL----DITFRRDPTNFR 582


>Medtr1g025075.2 | RNase L inhibitor ABC superfamily protein,
           putative | HC | chr1:8000040-8005224 | 20130731
          Length = 527

 Score =  403 bits (1036), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 195/233 (83%), Positives = 206/233 (88%)

Query: 1   MFDEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGV 60
           MFDEPSSYLDVKQRLKAAQV+RSLLRPNS+VIVVEHDLSVLDYLSDFICCLYGKPG YGV
Sbjct: 160 MFDEPSSYLDVKQRLKAAQVVRSLLRPNSFVIVVEHDLSVLDYLSDFICCLYGKPGVYGV 219

Query: 61  VTLPFSVREGINIFLAGFVPTENLRFRDESLTFKVXXXXXXXXXXXXXXXRYKYPAMSKT 120
           VTLPFSVREGINIFL+GFVPTENLRFR+ SLTFKV               R+KYP M+KT
Sbjct: 220 VTLPFSVREGINIFLSGFVPTENLRFREVSLTFKVAENPQETAEEAQTYARFKYPTMTKT 279

Query: 121 QGNFRLRVAEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEGGSDVDMPEFNVSY 180
           QGNFRL   EGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPD+ EG SDV+MPEFNVSY
Sbjct: 280 QGNFRLHAVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTTEGVSDVEMPEFNVSY 339

Query: 181 KPQKISPKFQSTVRHLLHQKIRDAYTHPQFVSDVMKPLLIEQLMDQEVVNLSG 233
           KPQKISPK Q  VR++LHQKIRDAYTHPQF+SDVMKPLLIEQLMDQEV NLSG
Sbjct: 340 KPQKISPKSQLPVRYMLHQKIRDAYTHPQFISDVMKPLLIEQLMDQEVQNLSG 392



 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)

Query: 1   MFDEPSSYLDVKQRLKAAQVI-RSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYG 59
           + DEPS+YLD +QR+ AA+VI R +L       +VEHD  +  YL+D +    G+P    
Sbjct: 412 LIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFIVEHDFIMATYLADKVIVYEGQPSINC 471

Query: 60  VVTLPFSVREGINIFLAGFVPTENLRFRDESLTFK 94
               P S+  G+N+FL+      ++ FR +   F+
Sbjct: 472 TANCPQSLLTGMNLFLSHL----DITFRRDPTNFR 502


>Medtr1g024860.1 | RNase L inhibitor ABC domain protein | HC |
           chr1:7908945-7900686 | 20130731
          Length = 529

 Score =  384 bits (986), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/233 (80%), Positives = 199/233 (85%), Gaps = 5/233 (2%)

Query: 1   MFDEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGV 60
           MFDEPSSYLDVKQRLKAAQV+RSLLRPN +     HDLSVLDYLSDFICCLYGKP  YGV
Sbjct: 225 MFDEPSSYLDVKQRLKAAQVVRSLLRPNRF-----HDLSVLDYLSDFICCLYGKPDVYGV 279

Query: 61  VTLPFSVREGINIFLAGFVPTENLRFRDESLTFKVXXXXXXXXXXXXXXXRYKYPAMSKT 120
           VTLPFSVREGINIFL+GFVPTENLRFR+ SLTFKV               R+KYP M+KT
Sbjct: 280 VTLPFSVREGINIFLSGFVPTENLRFREVSLTFKVAETPQKTAEEAQTYARFKYPTMTKT 339

Query: 121 QGNFRLRVAEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEGGSDVDMPEFNVSY 180
           QGNFRL   EGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPD+ EG SDV+MPEFNVSY
Sbjct: 340 QGNFRLHAVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTTEGVSDVEMPEFNVSY 399

Query: 181 KPQKISPKFQSTVRHLLHQKIRDAYTHPQFVSDVMKPLLIEQLMDQEVVNLSG 233
           KPQKISPK Q  VR++LHQKIRDAYTHPQF+SDVMKPLLIEQLMDQEV NLSG
Sbjct: 400 KPQKISPKSQLPVRYMLHQKIRDAYTHPQFISDVMKPLLIEQLMDQEVQNLSG 452



 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1   MFDEPSSYLDVKQRLKAAQVI-RSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKP 55
           + DEPS+YLD +QR+  A+VI R +L       +VEHD  + +YL+D +  L G+P
Sbjct: 472 LIDEPSAYLDSEQRIVVAKVIKRFILHAKKTAFIVEHDFIMANYLADKVIVLEGQP 527


>Medtr4g007890.1 | RNase L inhibitor ABC domain protein | HC |
           chr4:1305306-1299354 | 20130731
          Length = 600

 Score =  383 bits (983), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/233 (79%), Positives = 205/233 (87%), Gaps = 2/233 (0%)

Query: 1   MFDEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGV 60
           MFDEPSSYLDVKQRLKAAQV+RSLLR NSYVIVVEHDLSVLDYLSDFICCLYG PG YGV
Sbjct: 235 MFDEPSSYLDVKQRLKAAQVVRSLLRHNSYVIVVEHDLSVLDYLSDFICCLYGTPGVYGV 294

Query: 61  VTLPFSVREGINIFLAGFVPTENLRFRDESLTFKVXXXXXXXXXXXXXXXRYKYPAMSKT 120
           VTLPFSVREGINIFL+GFVPTENLRFR++SLTFKV               RYKYP M+KT
Sbjct: 295 VTLPFSVREGINIFLSGFVPTENLRFREDSLTFKV-AETPHETDEAQTYARYKYPTMTKT 353

Query: 121 QGNFRLRVAEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEGGSDVDMPEFNVSY 180
           QG FRLRVA GEFTDSQI+VM+GENGTGKTTFIRML G LKPD++ GGSD++MPEFN+SY
Sbjct: 354 QGKFRLRVAGGEFTDSQIVVMIGENGTGKTTFIRMLVGSLKPDTI-GGSDLEMPEFNISY 412

Query: 181 KPQKISPKFQSTVRHLLHQKIRDAYTHPQFVSDVMKPLLIEQLMDQEVVNLSG 233
           KPQ I+PKF+STVRHLLH++I  +YT PQF+SDVMKPLLIEQLMD+EV+NLSG
Sbjct: 413 KPQTITPKFKSTVRHLLHERIHKSYTDPQFISDVMKPLLIEQLMDKEVLNLSG 465



 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 5/95 (5%)

Query: 1   MFDEPSSYLDVKQRLKAAQVI-RSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYG 59
           + DEPS+YLD +QR+ AA+VI R +L       VVEHD  +  YL+D +    G+P    
Sbjct: 485 LIDEPSAYLDSEQRIIAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVYEGQPSIDC 544

Query: 60  VVTLPFSVREGINIFLAGFVPTENLRFRDESLTFK 94
               P S+  G+N+FL+      ++ FR +   F+
Sbjct: 545 TANSPQSLLTGMNLFLSHL----DITFRRDPTNFR 575