Miyakogusa Predicted Gene

Lj2g3v1550560.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1550560.2 Non Characterized Hit- tr|I1J6S2|I1J6S2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32505
PE,48.51,4e-19,seg,NULL; FDF,FDF domain; SCD6 PROTEIN-RELATED,NULL;
DFDF,DFDF domain; FFD,FFD box,CUFF.37454.2
         (186 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g025630.1 | protein decapping-like protein, putative | HC ...   171   3e-43
Medtr1g093860.1 | protein decapping-like protein | HC | chr1:421...   101   5e-22

>Medtr5g025630.1 | protein decapping-like protein, putative | HC |
           chr5:10439500-10444540 | 20130731
          Length = 386

 Score =  171 bits (433), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/160 (65%), Positives = 111/160 (69%), Gaps = 14/160 (8%)

Query: 30  QAPLLSLPTSVHK--YSAPQFTEEFDFEAMNEKFKKDEVWGSLGKAATKIEGVEGNEPPL 87
           Q+PL  LPTSVHK  Y +PQFTEEFDF AMNEKFKKDEVW S+ KA TKIEG+E  E  L
Sbjct: 238 QSPLEHLPTSVHKAQYPSPQFTEEFDFVAMNEKFKKDEVWNSIAKATTKIEGLEDIE-FL 296

Query: 88  NVCNRECDHGMIPNPKSAYKKDDFFDTISCNSMTRGSRNGQHRLSERMKLDTETFGNFQQ 147
           N+  REC H +    KSAYKKDDFFDTIS NSMTRGSRN   RLS R K DTE FGNF Q
Sbjct: 297 NLGEREC-HKL----KSAYKKDDFFDTISSNSMTRGSRN---RLSARTKQDTERFGNFHQ 348

Query: 148 RPIA-YGGYGAGRGENFRGSYNWXXXXXXXXXXXXPNFPF 186
           RP A YG YGAGRGENFRG                PNFPF
Sbjct: 349 RPNAGYGDYGAGRGENFRGYLG--RGYGYGGRGHGPNFPF 386


>Medtr1g093860.1 | protein decapping-like protein | HC |
           chr1:42121267-42114291 | 20130731
          Length = 647

 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/105 (51%), Positives = 72/105 (68%), Gaps = 13/105 (12%)

Query: 47  QFTEEFDFEAMNEKFKKDEVWGSLGKAATKIEGVEGNEPPLNVCN----RECDHGMIPN- 101
           +FTE+FDF AMNEKFKKDEVWG LGK+  K    +G E   N  +    ++ D+G + N 
Sbjct: 501 RFTEDFDFTAMNEKFKKDEVWGHLGKSNKK----DGEE---NASDEDGGQDEDNGDVSNL 553

Query: 102 -PKSAYKKDDFFDTISCNSMTRGSRNGQHRLSERMKLDTETFGNF 145
             K  Y KDDFFD++SCNS+    +NG+ R SE++K+DTETFG+F
Sbjct: 554 EVKPVYNKDDFFDSLSCNSLNHDPQNGRVRYSEQIKMDTETFGDF 598