Miyakogusa Predicted Gene
- Lj2g3v1550550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1550550.1 Non Characterized Hit- tr|A9NLK8|A9NLK8_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,39.29,2e-16,DUF1218,Protein of unknown function DUF1218;
seg,NULL,CUFF.37452.1
(182 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g025640.1 | transmembrane protein, putative | HC | chr5:10... 234 4e-62
Medtr8g072220.1 | transmembrane protein, putative | HC | chr8:30... 191 3e-49
Medtr4g077250.1 | transmembrane protein, putative | HC | chr4:29... 57 1e-08
>Medtr5g025640.1 | transmembrane protein, putative | HC |
chr5:10447134-10444989 | 20130731
Length = 183
Score = 234 bits (596), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 133/179 (74%)
Query: 1 MESPARYKXXXXXXXXXXXXXXXXXXXXXXVSEFKRNKKEDLRWNGKLCYLPSSQAFGLG 60
ME+P + K SE +NK +DLRWNGKLCYLPSSQA+GLG
Sbjct: 1 METPPKCKDALILSIIISIFLGLVSFTLCIASEITKNKMDDLRWNGKLCYLPSSQAYGLG 60
Query: 61 IAALVSFFVAQVIVNSILFKNSCSGGKRNAQHKIPTVARLLLLISWVGFGVAVILLITAT 120
IAALV F+AQ+I NS+LFKNSCS K+NAQ+K+P ARLL+LISW+ FGV VILLI AT
Sbjct: 61 IAALVCLFLAQIIGNSMLFKNSCSRRKKNAQYKLPFFARLLILISWLSFGVTVILLIVAT 120
Query: 121 SMNRRQPYGLGWLNGECYLVKEGTYAGSAILILVTISSVIGSALLTIKTNQADQGRKIH 179
SM++RQPYG GWLNGECYLVK GTYAGSAILILVTI S IGS+ TIK NQA+Q RKIH
Sbjct: 121 SMSKRQPYGAGWLNGECYLVKGGTYAGSAILILVTIGSAIGSSFSTIKINQAEQDRKIH 179
>Medtr8g072220.1 | transmembrane protein, putative | HC |
chr8:30498061-30499665 | 20130731
Length = 193
Score = 191 bits (486), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/148 (64%), Positives = 114/148 (77%)
Query: 32 SEFKRNKKEDLRWNGKLCYLPSSQAFGLGIAALVSFFVAQVIVNSILFKNSCSGGKRNAQ 91
+E KRNK+ DLRWNGKLCYLP+SQAFGL IA L A +I N +L +NS S K ++
Sbjct: 34 AEIKRNKENDLRWNGKLCYLPTSQAFGLSIATLFCLSFAHIIGNYVLLRNSYSRWKNISK 93
Query: 92 HKIPTVARLLLLISWVGFGVAVILLITATSMNRRQPYGLGWLNGECYLVKEGTYAGSAIL 151
K+PT A++L LISW+ FGV VILLI ATSM+RRQ YG GWLNGEC+LVK GTY+GSAIL
Sbjct: 94 FKMPTTAKVLFLISWLSFGVVVILLIAATSMSRRQLYGKGWLNGECFLVKGGTYSGSAIL 153
Query: 152 ILVTISSVIGSALLTIKTNQADQGRKIH 179
ILVTI S+ GSA T+K++QA Q KIH
Sbjct: 154 ILVTIGSLNGSAFSTLKSSQAHQDHKIH 181
>Medtr4g077250.1 | transmembrane protein, putative | HC |
chr4:29600281-29602521 | 20130731
Length = 211
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 32 SEFKRNKKEDLRW-NGKLCYLPSSQAFGLGIAALVSFFVAQVIVNSILFKNSCSGGKRNA 90
+E R K +++ N C P S A LG+ A +S ++Q+++N C ++++
Sbjct: 26 AEATRIKGYQIQFINPNQCIYPRSPALPLGLTAALSLMISQIVIN---VSTGCICCRKSS 82
Query: 91 QHKIP----TVARLLLLISWVGFGVAVILLITATSMN-RRQPYGLGWLNGECYLVKEGTY 145
+IP TVA ++SW + +A +LL+T ++N +R + + CY+VK G +
Sbjct: 83 --RIPDSNWTVALACFVLSWFTYVIAFLLLLTGAALNDQRGEESVYFGTYYCYVVKPGVF 140
Query: 146 AGSAILILVTI 156
AG AIL L ++
Sbjct: 141 AGGAILSLASV 151