Miyakogusa Predicted Gene

Lj2g3v1550550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1550550.1 Non Characterized Hit- tr|A9NLK8|A9NLK8_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,39.29,2e-16,DUF1218,Protein of unknown function DUF1218;
seg,NULL,CUFF.37452.1
         (182 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g025640.1 | transmembrane protein, putative | HC | chr5:10...   234   4e-62
Medtr8g072220.1 | transmembrane protein, putative | HC | chr8:30...   191   3e-49
Medtr4g077250.1 | transmembrane protein, putative | HC | chr4:29...    57   1e-08

>Medtr5g025640.1 | transmembrane protein, putative | HC |
           chr5:10447134-10444989 | 20130731
          Length = 183

 Score =  234 bits (596), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 116/179 (64%), Positives = 133/179 (74%)

Query: 1   MESPARYKXXXXXXXXXXXXXXXXXXXXXXVSEFKRNKKEDLRWNGKLCYLPSSQAFGLG 60
           ME+P + K                       SE  +NK +DLRWNGKLCYLPSSQA+GLG
Sbjct: 1   METPPKCKDALILSIIISIFLGLVSFTLCIASEITKNKMDDLRWNGKLCYLPSSQAYGLG 60

Query: 61  IAALVSFFVAQVIVNSILFKNSCSGGKRNAQHKIPTVARLLLLISWVGFGVAVILLITAT 120
           IAALV  F+AQ+I NS+LFKNSCS  K+NAQ+K+P  ARLL+LISW+ FGV VILLI AT
Sbjct: 61  IAALVCLFLAQIIGNSMLFKNSCSRRKKNAQYKLPFFARLLILISWLSFGVTVILLIVAT 120

Query: 121 SMNRRQPYGLGWLNGECYLVKEGTYAGSAILILVTISSVIGSALLTIKTNQADQGRKIH 179
           SM++RQPYG GWLNGECYLVK GTYAGSAILILVTI S IGS+  TIK NQA+Q RKIH
Sbjct: 121 SMSKRQPYGAGWLNGECYLVKGGTYAGSAILILVTIGSAIGSSFSTIKINQAEQDRKIH 179


>Medtr8g072220.1 | transmembrane protein, putative | HC |
           chr8:30498061-30499665 | 20130731
          Length = 193

 Score =  191 bits (486), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 95/148 (64%), Positives = 114/148 (77%)

Query: 32  SEFKRNKKEDLRWNGKLCYLPSSQAFGLGIAALVSFFVAQVIVNSILFKNSCSGGKRNAQ 91
           +E KRNK+ DLRWNGKLCYLP+SQAFGL IA L     A +I N +L +NS S  K  ++
Sbjct: 34  AEIKRNKENDLRWNGKLCYLPTSQAFGLSIATLFCLSFAHIIGNYVLLRNSYSRWKNISK 93

Query: 92  HKIPTVARLLLLISWVGFGVAVILLITATSMNRRQPYGLGWLNGECYLVKEGTYAGSAIL 151
            K+PT A++L LISW+ FGV VILLI ATSM+RRQ YG GWLNGEC+LVK GTY+GSAIL
Sbjct: 94  FKMPTTAKVLFLISWLSFGVVVILLIAATSMSRRQLYGKGWLNGECFLVKGGTYSGSAIL 153

Query: 152 ILVTISSVIGSALLTIKTNQADQGRKIH 179
           ILVTI S+ GSA  T+K++QA Q  KIH
Sbjct: 154 ILVTIGSLNGSAFSTLKSSQAHQDHKIH 181


>Medtr4g077250.1 | transmembrane protein, putative | HC |
           chr4:29600281-29602521 | 20130731
          Length = 211

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 11/131 (8%)

Query: 32  SEFKRNKKEDLRW-NGKLCYLPSSQAFGLGIAALVSFFVAQVIVNSILFKNSCSGGKRNA 90
           +E  R K   +++ N   C  P S A  LG+ A +S  ++Q+++N       C   ++++
Sbjct: 26  AEATRIKGYQIQFINPNQCIYPRSPALPLGLTAALSLMISQIVIN---VSTGCICCRKSS 82

Query: 91  QHKIP----TVARLLLLISWVGFGVAVILLITATSMN-RRQPYGLGWLNGECYLVKEGTY 145
             +IP    TVA    ++SW  + +A +LL+T  ++N +R    + +    CY+VK G +
Sbjct: 83  --RIPDSNWTVALACFVLSWFTYVIAFLLLLTGAALNDQRGEESVYFGTYYCYVVKPGVF 140

Query: 146 AGSAILILVTI 156
           AG AIL L ++
Sbjct: 141 AGGAILSLASV 151