Miyakogusa Predicted Gene

Lj2g3v1550430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1550430.1 Non Characterized Hit- tr|F6HJ31|F6HJ31_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,55.34,2e-18,coiled-coil,NULL; seg,NULL,CUFF.37437.1
         (351 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g025800.1 | transmembrane protein, putative | HC | chr5:10...   454   e-128

>Medtr5g025800.1 | transmembrane protein, putative | HC |
           chr5:10516568-10519656 | 20130731
          Length = 363

 Score =  454 bits (1168), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/362 (64%), Positives = 274/362 (75%), Gaps = 12/362 (3%)

Query: 1   MALISELLTNVILLVTRAFSLLKLVCLFGIRTTLILFSTWTELIRTTISFNVNIILRIIT 60
           MALISELL +V++LVTR FS+LK  CLF IR  L++  TWTELIRT I FNVNI+L II+
Sbjct: 1   MALISELLASVMILVTRGFSMLKEACLFPIRIGLVVIYTWTELIRTAIIFNVNIVLGIIS 60

Query: 61  WTFGLISLPARLVNSFQRERQLEGKLCQMQIELENLQWDRKKLQEHFQMVVKECKMMXXX 120
           WT GLI LP R VN+ QRERQLE +L +MQ E+ENL+W + KLQE FQM +KECKMM   
Sbjct: 61  WTIGLIFLPVRAVNAIQRERQLEQQLHRMQTEMENLEWKQNKLQERFQMALKECKMMEML 120

Query: 121 XXXXXXXHDMAIAKIEKLEGKLRDQINENLRLKEIQGKGYWSSKDQSKTD------ISQD 174
                  HDMA+AKIE LEGKLR QINENLRLKEIQGKGYW+SKDQ+  +       +  
Sbjct: 121 LAELEEEHDMAVAKIENLEGKLRGQINENLRLKEIQGKGYWNSKDQNIDNDRKIEKTNNG 180

Query: 175 IDQPILSWKSSYSG---ALQDLLMHKDSWEDDXXXXXXXXXXXXXGPKSGSV-PQVKPEM 230
           I  P L WKS  S    +L+DLLMHKD WED+             G KS       KPE 
Sbjct: 181 IPPPNLPWKSGNSENEVSLKDLLMHKDMWEDEDKTRIELLKLLKTGQKSAPANSAAKPEP 240

Query: 231 ISKNVELA--LDHSRDVALSQSLFSAILSLVVGITVWEAEDPCMPLVVALFTVVGMSLKS 288
           ISK++E++  LDH R VA+SQS+FSA+LSL+VG+TVWEA+DPCMPL+VALF VVGMSLKS
Sbjct: 241 ISKDIEVSEVLDHHRYVAISQSIFSAVLSLIVGVTVWEADDPCMPLIVALFAVVGMSLKS 300

Query: 289 VVQFFFTIRNKPASDAVALLSLNWFILGTLSYPTLPRVATMLSPLVLRFVDQTMNRFGLL 348
           VVQFFF+I+NKPASDAVALLS NWFILGTL+YPTLPRVA ML+PLVLRF+DQTM RFGLL
Sbjct: 301 VVQFFFSIKNKPASDAVALLSFNWFILGTLTYPTLPRVAPMLAPLVLRFLDQTMTRFGLL 360

Query: 349 AL 350
           +L
Sbjct: 361 SL 362