Miyakogusa Predicted Gene

Lj2g3v1550060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1550060.1 Non Characterized Hit- tr|I1MWE1|I1MWE1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,56.86,1e-17,seg,NULL,CUFF.37412.1
         (142 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g026390.1 | hypothetical protein | HC | chr5:10852509-1085...    65   3e-11

>Medtr5g026390.1 | hypothetical protein | HC |
          chr5:10852509-10853875 | 20130731
          Length = 290

 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 43/73 (58%)

Query: 5  SDLSDTEDSAINEIISXXXXXXXXXXXXXINCAGVTDSVLPSDLDSRFRKLKSLPANRTT 64
          SD  + EDS I+EIIS             INC+  T S LP +L+SRF KLKS PAN T 
Sbjct: 7  SDTEEEEDSTISEIISQAKDSILLQQISAINCSSFTHSDLPPNLESRFNKLKSFPANHTP 66

Query: 65 PPTFNAKARSFST 77
          PP + +K  +FST
Sbjct: 67 PPPYLSKNPTFST 79