Miyakogusa Predicted Gene

Lj2g3v1550050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1550050.1 Non Characterized Hit- tr|I1MWE1|I1MWE1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,50.79,1e-17,seg,NULL,CUFF.37413.1
         (251 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g026390.1 | hypothetical protein | HC | chr5:10852509-1085...   131   6e-31

>Medtr5g026390.1 | hypothetical protein | HC |
           chr5:10852509-10853875 | 20130731
          Length = 290

 Score =  131 bits (329), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/286 (36%), Positives = 130/286 (45%), Gaps = 41/286 (14%)

Query: 5   SDLSDTEDSAINEIISXXXXXXXXXXXXXINCAGVTDSVLPSDLDSRFRKLKSLPANRTT 64
           SD  + EDS I+EIIS             INC+  T S LP +L+SRF KLKS PAN T 
Sbjct: 7   SDTEEEEDSTISEIISQAKDSILLQQISAINCSSFTHSDLPPNLESRFNKLKSFPANHTP 66

Query: 65  PPTFNAKARSFSTLSSGTL---------------NKTVMGSDQSPNFSPPKND------- 102
           PP + +K  +FST  +                  N +     ++ NFSPPK++       
Sbjct: 67  PPPYLSKNPTFSTPKNPNSDSQSVSSPSKHATFSNPSSTKIQKNLNFSPPKDNNSTKNPL 126

Query: 103 --------PEPDEHTEKVKSKSKPKHGXXXXXXXXXXXXXXXXXXXXXXXXXXGKGSKQR 154
                        H EK  +  KPK+G                           K SK +
Sbjct: 127 SDSGSVSSHSNSSHREKGLN-PKPKNGSFSPSDSSHTSEESPISSLQMKREE-NKCSKVK 184

Query: 155 TL-FSP--SPPRMAGCFWCSPXXXXXXXXX---ENV-VGGWDQ--SDELFSDLGGLSLSK 205
           ++  SP  SPPR  GCFWCSP            EN  V GW++  SDEL S +G LS  K
Sbjct: 185 SMSLSPESSPPRKWGCFWCSPKKEQNKKKSRDKENAGVVGWEECTSDELLSGIGSLSSKK 244

Query: 206 QRXXXXXXXXXXXXXVSREAEKIVEWAKSVSARMNISDIEDELSDD 251
           +              ++REAEKIVEWAK VS RMN+ DIEDELSDD
Sbjct: 245 RLNMIEKALKEEEKRINREAEKIVEWAKHVSGRMNVPDIEDELSDD 290